@prefix rdf: . @prefix owl: . @prefix rdfs: . @prefix xml: . @prefix xsd: . a owl:Ontology; owl:versionIRI ; "PLANA, the PLANarian Anatomy Ontology, encompasses the anatomy of developmental stages and adult biotypes of Schmidtea mediterranea."; "Planarian Anatomy Ontology (PLANA)"; ; "Planarian_Anatomy"; "1.2"; "CARO part_of NCBITaxon:79327; CL part_of NCBITaxon:79327"; owl:versionInfo "2023-03-13" . a owl:AnnotationProperty . a owl:AnnotationProperty . a owl:AnnotationProperty . a owl:AnnotationProperty . a owl:AnnotationProperty . a owl:AnnotationProperty . a owl:AnnotationProperty; "definition"@en; ; "The official definition, explaining the meaning of a class or property. Shall be Aristotelian, formalized and normalized. Can be augmented with colloquial definitions."@en; """2012-04-05: Barry Smith The official OBI definition, explaining the meaning of a class or property: 'Shall be Aristotelian, formalized and normalized. Can be augmented with colloquial definitions' is terrible. Can you fix to something like: A statement of necessary and sufficient conditions explaining the meaning of an expression referring to a class or property. Alan Ruttenberg Your proposed definition is a reasonable candidate, except that it is very common that necessary and sufficient conditions are not given. Mostly they are necessary, occasionally they are necessary and sufficient or just sufficient. Often they use terms that are not themselves defined and so they effectively can't be evaluated by those criteria. On the specifics of the proposed definition: We don't have definitions of 'meaning' or 'expression' or 'property'. For 'reference' in the intended sense I think we use the term 'denotation'. For 'expression', I think we you mean symbol, or identifier. For 'meaning' it differs for class and property. For class we want documentation that let's the intended reader determine whether an entity is instance of the class, or not. For property we want documentation that let's the intended reader determine, given a pair of potential relata, whether the assertion that the relation holds is true. The 'intended reader' part suggests that we also specify who, we expect, would be able to understand the definition, and also generalizes over human and computer reader to include textual and logical definition. Personally, I am more comfortable weakening definition to documentation, with instructions as to what is desirable. We also have the outstanding issue of how to aim different definitions to different audiences. A clinical audience reading chebi wants a different sort of definition documentation/definition from a chemistry trained audience, and similarly there is a need for a definition that is adequate for an ontologist to work with. """@en; "PERSON:Daniel Schober"@en; "GROUP:OBI:"@en; rdfs:isDefinedBy ; rdfs:label "definition", "definition"@en . a owl:AnnotationProperty; "editor note"@en; ; "An administrative note intended for its editor. It may not be included in the publication version of the ontology, so it should contain nothing necessary for end users to understand the ontology."@en; "PERSON:Daniel Schober"@en; "GROUP:OBI:"@en; rdfs:isDefinedBy ; rdfs:label "editor note"@en . a owl:AnnotationProperty . a owl:AnnotationProperty . a owl:AnnotationProperty . a owl:AnnotationProperty; "curator note"@en; ; "An administrative note of use for a curator but of no use for a user"@en; "PERSON:Alan Ruttenberg"@en; rdfs:isDefinedBy ; rdfs:label "curator note"@en . a owl:AnnotationProperty . a owl:AnnotationProperty . a owl:AnnotationProperty; "imported from"@en; ; "For external terms/classes, the ontology from which the term was imported"@en; "PERSON:Alan Ruttenberg"@en, "PERSON:Melanie Courtot"@en; "GROUP:OBI:"@en; rdfs:isDefinedBy ; rdfs:label "imported from"@en . a owl:AnnotationProperty . a owl:AnnotationProperty . a owl:AnnotationProperty . a owl:AnnotationProperty . a owl:AnnotationProperty . a owl:AnnotationProperty . a owl:AnnotationProperty . a owl:AnnotationProperty; "term replaced by"@en; ; "Use on obsolete terms, relating the term to another term that can be used as a substitute"@en; "Person:Alan Ruttenberg"@en; "Person:Alan Ruttenberg"@en; rdfs:comment "Add as annotation triples in the granting ontology"@en; rdfs:label "term replaced by", "term replaced by"@en . a owl:AnnotationProperty . a owl:AnnotationProperty; rdfs:subPropertyOf . a owl:AnnotationProperty . a owl:AnnotationProperty; "Relation p is the indirect form of relation q iff p is a subPropertyOf q, and there exists some p' such that p' is the direct form of q, p' o p' -> p, and forall x,y : x q y -> either (1) x p y or (2) x p' y", "relation p is the indirect form of relation q iff p is a subPropertyOf q, and there exists some p' such that p' is the direct form of q, p' o p' -> p, and forall x,y : x q y -> either (1) x p y or (2) x p' y"; ; rdfs:label "is indirect form of"; rdfs:seeAlso . a owl:AnnotationProperty; "If R <- P o Q is a defining property chain axiom, then it also holds that R -> P o Q. Note that this cannot be expressed directly in OWL"; rdfs:label "is a defining property chain axiom" . a owl:AnnotationProperty; "If R <- P o Q is a defining property chain axiom, then (1) R -> P o Q holds and (2) Q is either reflexive or locally reflexive. A corollary of this is that P SubPropertyOf R."; rdfs:label "is a defining property chain axiom where second argument is reflexive" . a owl:AnnotationProperty . a owl:AnnotationProperty . a owl:AnnotationProperty . a owl:AnnotationProperty; "An alternate textual definition for a class taken unmodified from an external source. This definition may have been used to derive a generalized definition for the new class."; rdfs:label "external_definition" . a owl:AnnotationProperty; "Notes on the homology status of this class."; rdfs:label "homology_notes" . a owl:AnnotationProperty; rdfs:label "has_relational_adjective" . a owl:AnnotationProperty; "Notes on the how instances of this class vary across species."; rdfs:label "taxon_notes" . a owl:AnnotationProperty; "Notes on how similar or equivalent classes are represented in other ontologies."; rdfs:label "external_ontology_notes" . a owl:AnnotationProperty . a owl:AnnotationProperty . a owl:AnnotationProperty . a owl:AnnotationProperty . a owl:AnnotationProperty . a owl:AnnotationProperty . a owl:AnnotationProperty; rdfs:subPropertyOf . a owl:AnnotationProperty; rdfs:subPropertyOf . a owl:AnnotationProperty; rdfs:subPropertyOf . a owl:AnnotationProperty; rdfs:subPropertyOf . a owl:AnnotationProperty; "IAO:0100001"; ; rdfs:label "synonym typically used in the context of human anatomy"; rdfs:subPropertyOf . a owl:AnnotationProperty . a owl:AnnotationProperty; "IAO:0100001"; ; rdfs:label "synonym typically used in the context of vertebrate anatomy"; rdfs:subPropertyOf . a owl:AnnotationProperty; rdfs:subPropertyOf . a owl:AnnotationProperty; rdfs:subPropertyOf . a owl:AnnotationProperty; rdfs:subPropertyOf . a owl:AnnotationProperty; rdfs:subPropertyOf . a owl:AnnotationProperty; rdfs:subPropertyOf . a owl:AnnotationProperty; rdfs:subPropertyOf . a owl:AnnotationProperty; rdfs:subPropertyOf . a owl:AnnotationProperty; rdfs:subPropertyOf . a owl:AnnotationProperty; rdfs:subPropertyOf . a owl:AnnotationProperty; rdfs:subPropertyOf . a owl:AnnotationProperty; rdfs:subPropertyOf . a owl:AnnotationProperty; rdfs:subPropertyOf . a owl:AnnotationProperty; rdfs:subPropertyOf . a owl:AnnotationProperty; rdfs:subPropertyOf . a owl:AnnotationProperty; rdfs:subPropertyOf . a owl:AnnotationProperty; rdfs:subPropertyOf . a owl:AnnotationProperty; rdfs:subPropertyOf . a owl:AnnotationProperty; rdfs:subPropertyOf . a owl:AnnotationProperty; rdfs:subPropertyOf . a owl:AnnotationProperty; rdfs:subPropertyOf . a owl:AnnotationProperty; rdfs:subPropertyOf . a owl:AnnotationProperty; rdfs:subPropertyOf . a owl:AnnotationProperty; rdfs:subPropertyOf . a owl:AnnotationProperty; rdfs:subPropertyOf . a owl:AnnotationProperty; rdfs:subPropertyOf . a owl:AnnotationProperty; rdfs:subPropertyOf . a owl:AnnotationProperty . a owl:AnnotationProperty; "http://purl.org/dc/elements/1.1/creator"; "uberon"; "dc-creator"; true; "dc-creator"; rdfs:label "creator" . a owl:AnnotationProperty . a owl:AnnotationProperty; "http://purl.org/dc/elements/1.1/description"; "uberon"; "dc-description"; true; "dc-description"; rdfs:label "description" . a owl:AnnotationProperty . a owl:AnnotationProperty . a owl:AnnotationProperty; "http://purl.org/dc/elements/1.1/title"; "uberon"; "dc-title"; true; "dc-title"; rdfs:label "title" . a owl:AnnotationProperty . a owl:AnnotationProperty . a owl:AnnotationProperty . a owl:AnnotationProperty; "http://purl.org/dc/terms/license"; "uberon"; "dcterms-license"; true; "dcterms-license"; rdfs:label "license" . a owl:AnnotationProperty . a owl:AnnotationProperty . a owl:AnnotationProperty . a owl:AnnotationProperty . a owl:AnnotationProperty . a owl:AnnotationProperty . a owl:AnnotationProperty . a owl:AnnotationProperty . a owl:AnnotationProperty; "IAO:0100001"; rdfs:label "namespace-id-rule" . a owl:AnnotationProperty . a owl:AnnotationProperty; "IAO:0100001"; rdfs:label "synonym_type_property" . a owl:AnnotationProperty . a owl:AnnotationProperty . a owl:AnnotationProperty . a owl:AnnotationProperty . a owl:AnnotationProperty . a owl:AnnotationProperty; rdfs:label "has_alternative_id" . a owl:AnnotationProperty; "An alternative label for a class or property which has a more general meaning than the preferred name/primary label."; ; "https://github.com/information-artifact-ontology/ontology-metadata/issues/18"; rdfs:label "has broad synonym"@en, "has_broad_synonym"; rdfs:seeAlso "https://github.com/information-artifact-ontology/ontology-metadata/issues/18" . a owl:AnnotationProperty; "IAO:0100001"; rdfs:label "database_cross_reference" . a owl:AnnotationProperty; "An alternative label for a class or property which has the exact same meaning than the preferred name/primary label."; ; "https://github.com/information-artifact-ontology/ontology-metadata/issues/20"; "IAO:0100001"; rdfs:label "has exact synonym"@en, "has_exact_synonym"; rdfs:seeAlso "https://github.com/information-artifact-ontology/ontology-metadata/issues/20" . a owl:AnnotationProperty; "An alternative label for a class or property which has a more specific meaning than the preferred name/primary label."; ; "https://github.com/information-artifact-ontology/ontology-metadata/issues/19"; "IAO:0100001"; rdfs:label "has narrow synonym"@en, "has_narrow_synonym"; rdfs:seeAlso "https://github.com/information-artifact-ontology/ontology-metadata/issues/19" . a owl:AnnotationProperty; "IAO:0100001"; rdfs:label "has_obo_format_version" . a owl:AnnotationProperty; "IAO:0100001"; rdfs:label "has_obo_namespace" . a owl:AnnotationProperty; "An alternative label for a class or property that has been used synonymously with the primary term name, but the usage is not strictly correct."; ; "https://github.com/information-artifact-ontology/ontology-metadata/issues/21"; "IAO:0100001"; rdfs:label "has related synonym"@en, "has_related_synonym"; rdfs:seeAlso "https://github.com/information-artifact-ontology/ontology-metadata/issues/21" . a owl:AnnotationProperty; "IAO:0100001"; rdfs:label "has_scope" . a owl:AnnotationProperty; "IAO:0100001"; rdfs:label "has_synonym_type" . a owl:AnnotationProperty . a owl:AnnotationProperty; rdfs:label "in_subset" . a owl:AnnotationProperty . a owl:AnnotationProperty . a owl:AnnotationProperty; "IAO:0100001"; rdfs:label "shorthand" . a owl:AnnotationProperty . a owl:AnnotationProperty; "Sofia Robb"; "2017-07-26T18:19:59Z"^^xsd:dateTime; rdfs:label "treat-xrefs-as-genus-differentia"@en . a owl:AnnotationProperty . a owl:AnnotationProperty . a owl:AnnotationProperty . rdfs:comment a owl:AnnotationProperty . rdfs:label a owl:AnnotationProperty . owl:deprecated a owl:AnnotationProperty . a owl:AnnotationProperty . a owl:AnnotationProperty . a owl:AnnotationProperty . a owl:AnnotationProperty . a owl:AnnotationProperty . a owl:ObjectProperty, owl:TransitiveProperty; rdfs:subPropertyOf ; owl:inverseOf ; "is part of"@en; "my brain is part of my body (continuant parthood, two material entities)"@en, "my stomach cavity is part of my stomach (continuant parthood, immaterial entity is part of material entity)"@en, "this day is part of this year (occurrent parthood)"@en; "a core relation that holds between a part and its whole"@en; "Everything is part of itself. Any part of any part of a thing is itself part of that thing. Two distinct things cannot be part of each other."@en, "Occurrents are not subject to change and so parthood between occurrents holds for all the times that the part exists. Many continuants are subject to change, so parthood between continuants will only hold at certain times, but this is difficult to specify in OWL. See http://purl.obolibrary.org/obo/ro/docs/temporal-semantics/"@en, """Parthood requires the part and the whole to have compatible classes: only an occurrent can be part of an occurrent; only a process can be part of a process; only a continuant can be part of a continuant; only an independent continuant can be part of an independent continuant; only an immaterial entity can be part of an immaterial entity; only a specifically dependent continuant can be part of a specifically dependent continuant; only a generically dependent continuant can be part of a generically dependent continuant. (This list is not exhaustive.) A continuant cannot be part of an occurrent: use 'participates in'. An occurrent cannot be part of a continuant: use 'has participant'. A material entity cannot be part of an immaterial entity: use 'has location'. A specifically dependent continuant cannot be part of an independent continuant: use 'inheres in'. An independent continuant cannot be part of a specifically dependent continuant: use 'bearer of'."""@en; "part_of"@en; ; , , , , , , ; "BFO:0000050"; "external", "quality", "spatial", "uberon"; "part_of"; , , , ; "part_of"; rdfs:label "part of", "part of"@en, "part_of"; rdfs:seeAlso , , "http://www.obofoundry.org/ro/#OBO_REL:part_of" . a owl:ObjectProperty, owl:TransitiveProperty; rdfs:subPropertyOf ; "has part"@en; "my body has part my brain (continuant parthood, two material entities)"@en, "my stomach has part my stomach cavity (continuant parthood, material entity has part immaterial entity)"@en, "this year has part this day (occurrent parthood)"@en; "a core relation that holds between a whole and its part"@en; "Everything has itself as a part. Any part of any part of a thing is itself part of that thing. Two distinct things cannot have each other as a part."@en, "Occurrents are not subject to change and so parthood between occurrents holds for all the times that the part exists. Many continuants are subject to change, so parthood between continuants will only hold at certain times, but this is difficult to specify in OWL. See http://purl.obolibrary.org/obo/ro/docs/temporal-semantics/"@en, """Parthood requires the part and the whole to have compatible classes: only an occurrent have an occurrent as part; only a process can have a process as part; only a continuant can have a continuant as part; only an independent continuant can have an independent continuant as part; only a specifically dependent continuant can have a specifically dependent continuant as part; only a generically dependent continuant can have a generically dependent continuant as part. (This list is not exhaustive.) A continuant cannot have an occurrent as part: use 'participates in'. An occurrent cannot have a continuant as part: use 'has participant'. An immaterial entity cannot have a material entity as part: use 'location of'. An independent continuant cannot have a specifically dependent continuant as part: use 'bearer of'. A specifically dependent continuant cannot have an independent continuant as part: use 'inheres in'."""@en; "has_part"@en; ; "BFO:0000051"; "external", "quality", "spatial", "uberon"; "has_part"; , , ; "has_part"; rdfs:label "has part", "has part"@en, "has_part" . a owl:ObjectProperty, owl:TransitiveProperty; rdfs:subPropertyOf ; owl:inverseOf ; rdfs:domain ; rdfs:range ; owl:propertyChainAxiom _:68386a; "preceded by"@en; "x is preceded by y if and only if the time point at which y ends is before or equivalent to the time point at which x starts. Formally: x preceded by y iff ω(y) <= α(x), where α is a function that maps a process to a start point, and ω is a function that maps a process to an end point."@en; "An example is: translation preceded_by transcription; aging preceded_by development (not however death preceded_by aging). Where derives_from links classes of continuants, preceded_by links classes of processes. Clearly, however, these two relations are not independent of each other. Thus if cells of type C1 derive_from cells of type C, then any cell division involving an instance of C1 in a given lineage is preceded_by cellular processes involving an instance of C. The assertion P preceded_by P1 tells us something about Ps in general: that is, it tells us something about what happened earlier, given what we know about what happened later. Thus it does not provide information pointing in the opposite direction, concerning instances of P1 in general; that is, that each is such as to be succeeded by some instance of P. Note that an assertion to the effect that P preceded_by P1 is rather weak; it tells us little about the relations between the underlying instances in virtue of which the preceded_by relation obtains. Typically we will be interested in stronger relations, for example in the relation immediately_preceded_by, or in relations which combine preceded_by with a condition to the effect that the corresponding instances of P and P1 share participants, or that their participants are connected by relations of derivation, or (as a first step along the road to a treatment of causality) that the one process in some way affects (for example, initiates or regulates) the other."@en; "is preceded by"@en, "preceded_by"@en; "http://www.obofoundry.org/ro/#OBO_REL:preceded_by"; ; rdfs:label "preceded by"@en . _:68386a rdf:first ; rdf:rest _:68387a . _:68387a rdf:first ; rdf:rest rdf:nil . a owl:ObjectProperty, owl:TransitiveProperty; rdfs:subPropertyOf ; rdfs:domain ; rdfs:range ; owl:propertyChainAxiom _:68388a; "precedes"@en; "x precedes y if and only if the time point at which x ends is before or equivalent to the time point at which y starts. Formally: x precedes y iff ω(x) <= α(y), where α is a function that maps a process to a start point, and ω is a function that maps a process to an end point."@en; ; rdfs:label "precedes"@en . _:68388a rdf:first ; rdf:rest _:68389a . _:68389a rdf:first ; rdf:rest rdf:nil . a owl:ObjectProperty; owl:inverseOf ; rdfs:domain ; rdfs:range ; owl:propertyChainAxiom _:6838aa, _:6838ca; "occurs in"@en; "b occurs_in c =def b is a process and c is a material entity or immaterial entity& there exists a spatiotemporal region r and b occupies_spatiotemporal_region r.& forall(t) if b exists_at t then c exists_at t & there exist spatial regions s and s’ where & b spatially_projects_onto s at t& c is occupies_spatial_region s’ at t& s is a proper_continuant_part_of s’ at t"@en; "occurs_in"@en, "unfolds in"@en, "unfolds_in"@en; , , ; rdfs:comment "Paraphrase of definition: a relation between a process and an independent continuant, in which the process takes place entirely within the independent continuant"; rdfs:isDefinedBy ; rdfs:label "occurs in"@en . _:6838aa rdf:first ; rdf:rest _:6838ba . _:6838ba rdf:first ; rdf:rest rdf:nil . _:6838ca rdf:first ; rdf:rest _:6838da . _:6838da rdf:first ; rdf:rest rdf:nil . a owl:ObjectProperty; "site of"@en; "[copied from inverse property 'occurs in'] b occurs_in c =def b is a process and c is a material entity or immaterial entity& there exists a spatiotemporal region r and b occupies_spatiotemporal_region r.& forall(t) if b exists_at t then c exists_at t & there exist spatial regions s and s’ where & b spatially_projects_onto s at t& c is occupies_spatial_region s’ at t& s is a proper_continuant_part_of s’ at t"@en; rdfs:comment "Paraphrase of definition: a relation between an independent continuant and a process, in which the process takes place entirely within the independent continuant"; rdfs:isDefinedBy ; rdfs:label "contains process"@en . a owl:ObjectProperty, owl:TransitiveProperty; owl:inverseOf ; "x anterior to y iff x is further along the antero-posterior axis than y, towards the head. An antero-posterior axis is an axis that extends through an organism from head end to opposite end of body or tail."; "BSPO:0000096"; "rostral_to"; "spatial"; "anterior_to"; "anterior_to"; rdfs:label "anterior to"; rdfs:seeAlso , . _:6838ea a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "x anterior to y iff x is further along the antero-posterior axis than y, towards the head. An antero-posterior axis is an axis that extends through an organism from head end to opposite end of body or tail."; "BSPO:cjm" . a owl:ObjectProperty, owl:TransitiveProperty; owl:inverseOf ; "x dorsal to y iff x is further along the dorso-ventral axis than y, towards the back. A dorso-ventral axis is an axis that extends through an organism from back (e.g. spinal column) to front (e.g. belly)."; "BSPO:0000098"; "spatial"; "dorsal_to"; "dorsal_to"; rdfs:label "dorsal to"; rdfs:seeAlso , . _:6838fa a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "x dorsal to y iff x is further along the dorso-ventral axis than y, towards the back. A dorso-ventral axis is an axis that extends through an organism from back (e.g. spinal column) to front (e.g. belly)."; "BSPO:cjm" . a owl:ObjectProperty, owl:TransitiveProperty; "x posterior to y iff x is further along the antero-posterior axis than y, towards the body/tail. An antero-posterior axis is an axis that extends through an organism from head end to opposite end of body or tail."; "BSPO:0000099"; "caudal to"; "spatial"; "posterior_to"; "posterior_to"; rdfs:label "posterior to"; rdfs:seeAlso , . _:68390a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "x posterior to y iff x is further along the antero-posterior axis than y, towards the body/tail. An antero-posterior axis is an axis that extends through an organism from head end to opposite end of body or tail."; "BSPO:cjm" . _:68391a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "caudal to"; . a owl:ObjectProperty, owl:TransitiveProperty; "x ventral to y iff x is further along the dorso-ventral axis than y, towards the front. A dorso-ventral axis is an axis that extends through an organism from back (e.g. spinal column) to front (e.g. belly)."; "BSPO:0000102"; "spatial"; "ventral_to"; "ventral_to"; rdfs:label "ventral to"; rdfs:seeAlso , . _:68392a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "x ventral to y iff x is further along the dorso-ventral axis than y, towards the front. A dorso-ventral axis is an axis that extends through an organism from back (e.g. spinal column) to front (e.g. belly)."; "BSPO:cjm" . a owl:ObjectProperty; rdfs:domain ; rdfs:range ; "Crosses at an angle that is 90 degrees, or close to 90 degrees. In any non-linear organism, the main axes are rarely perpendicular when taken through the organism as a whole."; "BSPO:0000104"; "spatial"; "approximately_perpendicular_to"; "approximately_perpendicular_to"; rdfs:label "approximately perpendicular to" . _:68393a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Crosses at an angle that is 90 degrees, or close to 90 degrees. In any non-linear organism, the main axes are rarely perpendicular when taken through the organism as a whole."; "BSPO:cjm" . a owl:ObjectProperty, owl:TransitiveProperty; owl:inverseOf ; "Further away from the surface of the organism. Thus, the muscular layer is deep to the skin, but superficial to the intestines."; "BSPO:0000107"; "spatial"; "deep_to"; "deep_to"; rdfs:label "deep to" . _:68394a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Further away from the surface of the organism. Thus, the muscular layer is deep to the skin, but superficial to the intestines."; "BSPO:cjm" . a owl:ObjectProperty, owl:TransitiveProperty; "Near the outer surface of the organism. Thus, skin is superficial to the muscle layer."; "BSPO:0000108"; "spatial"; "superficial_to"; "superficial_to"; rdfs:label "superficial to" . _:68395a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Near the outer surface of the organism. Thus, skin is superficial to the muscle layer."; "BSPO:cjm" . a owl:ObjectProperty; "Direcly opposite to. i.e. on the opposite side through the axis."; "BSPO:0000113"; "spatial"; "opposite_to"; "opposite_to"; rdfs:label "opposite to" . _:68396a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Direcly opposite to. i.e. on the opposite side through the axis."; "BSPO:cjm" . a owl:ObjectProperty; rdfs:subPropertyOf ; owl:propertyDisjointWith ; "X in left side of Y <=> if Y is subdivided into two left and right portions, X is part of the left portion."; "BSPO:0000120"; "spatial"; "in_left_side_of"; "in_left_side_of"; rdfs:label "in left side of"; rdfs:seeAlso "https://github.com/obophenotype/uberon/wiki/Modeling-paired-structures-Design-Pattern"^^xsd:anyURI . _:68397a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "X in left side of Y <=> if Y is subdivided into two left and right portions, X is part of the left portion."; "BSPO:PATO_mtg_2009" . a owl:ObjectProperty; rdfs:subPropertyOf ; "X in right side of Y <=> if Y is subdivided into two left and right portions, X is part of the right portion."; "BSPO:0000121"; "spatial"; "in_right_side_of"; "in_right_side_of"; rdfs:label "in right side of"; rdfs:seeAlso "https://github.com/obophenotype/uberon/wiki/Modeling-paired-structures-Design-Pattern"^^xsd:anyURI . _:68398a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "X in right side of Y <=> if Y is subdivided into two left and right portions, X is part of the right portion."; "BSPO:PATO_mtg_2009" . a owl:ObjectProperty; rdfs:subPropertyOf ; "X in lateral side of Y <=> if X is in left side of Y or X is in right side of Y. X is often, but not always a paired structure"; "BSPO:0000126"; "spatial"; "in_lateral_side_of"; "in_lateral_side_of"; rdfs:label "in lateral side of"; rdfs:seeAlso , "https://github.com/obophenotype/uberon/wiki/Modeling-paired-structures-Design-Pattern"^^xsd:anyURI . _:68399a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "X in lateral side of Y <=> if X is in left side of Y or X is in right side of Y. X is often, but not always a paired structure"; "UBERON:cjm" . a owl:ObjectProperty; "x is parallel t y iff x and y are lines or planes which when extended indefinitely do not cross."; "spatial"; "parallel_to"; rdfs:label "parallel to" . _:6839aa a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "x is parallel t y iff x and y are lines or planes which when extended indefinitely do not cross."; "BSPO:curators" . a owl:ObjectProperty; rdfs:subPropertyOf ; owl:inverseOf ; "x immediately deep to y iff x deep_to y and x is contiguous with y."; "BSPO:0001107"; "spatial"; "immediately_deep_to"; "immediately_deep_to"; rdfs:label "immediately deep to" . _:6839ba a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "x immediately deep to y iff x deep_to y and x is contiguous with y."; "BSPO:curators" . a owl:ObjectProperty; rdfs:domain ; rdfs:range ; "BSPO:0015001"; "spatial"; "finishes_axis"; "finishes_axis"; rdfs:comment "A directional axis can be divided by a plane. Following Allen Interval Algebra terminology we say that the side on which the axis initiates starts the axis, with the other side finishing the axis. If s finishes axis x, and x has end point p, then x overlaps p"; rdfs:label "finishes axis" . a owl:ObjectProperty; rdfs:domain ; rdfs:range ; "crossing at right angles"; "BSPO:0015005"; "spatial"; "orthogonal_to"; "orthogonal_to"; rdfs:label "orthogonal to" . _:6839ca a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "crossing at right angles"; "BSPO:cjm" . a owl:ObjectProperty; rdfs:domain ; "Intersects at two points."; "BSPO:0015006"; "spatial"; "passes_through"; "passes_through"; rdfs:label "passes through" . _:6839da a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Intersects at two points."; "BSPO:cjm" . a owl:ObjectProperty; rdfs:domain ; rdfs:range ; "BSPO:0015007"; "spatial"; "starts_axis"; "starts_axis"; rdfs:comment "A directional axis can be divided by a plane. Following Allen Interval Algebra terminology we say that the side on which the axis initiates starts the axis, with the other side finishing the axis. . If s starts axis x, and x has start point p, then x overlaps p"; rdfs:label "starts axis" . a owl:ObjectProperty; rdfs:domain ; "BSPO:0015008"; "spatial"; "surface_of"; "surface_of"; rdfs:comment "placeholder. used for relation between anatomical surface and an anatomical side."; rdfs:label "surface of" . a owl:ObjectProperty; rdfs:subPropertyOf , ; "x immediately superficial to y iff x superficial to y and x is contiguous with y."; "BSPO:0015014"; "spatial"; "immediately_superficial_to"; "immediately_superficial_to"; rdfs:label "immediately superficial to"; rdfs:seeAlso . _:6839ea a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "x immediately superficial to y iff x superficial to y and x is contiguous with y."; "BSPO:curators" . a owl:ObjectProperty; rdfs:domain ; "This document is about information artifacts and their representations"@en; ; "A (currently) primitive relation that relates an information artifact to an entity."@en; """7/6/2009 Alan Ruttenberg. Following discussion with Jonathan Rees, and introduction of \"mentions\" relation. Weaken the is_about relationship to be primitive. We will try to build it back up by elaborating the various subproperties that are more precisely defined. Some currently missing phenomena that should be considered \"about\" are predications - \"The only person who knows the answer is sitting beside me\" , Allegory, Satire, and other literary forms that can be topical without explicitly mentioning the topic."""@en; "person:Alan Ruttenberg"@en; "Smith, Ceusters, Ruttenberg, 2000 years of philosophy"@en; rdfs:label "is about"@en . a owl:ObjectProperty; rdfs:subPropertyOf ; owl:inverseOf ; rdfs:domain ; rdfs:range ; "A person's name denotes the person. A variable name in a computer program denotes some piece of memory. Lexically equivalent strings can denote different things, for instance \"Alan\" can denote different people. In each case of use, there is a case of the denotation relation obtaining, between \"Alan\" and the person that is being named."@en; "A primitive, instance-level, relation obtaining between an information content entity and some portion of reality. Denotation is what happens when someone creates an information content entity E in order to specifically refer to something. The only relation between E and the thing is that E can be used to 'pick out' the thing. This relation connects those two together. Freedictionary.com sense 3: To signify directly; refer to specifically"@en; """2009-11-10 Alan Ruttenberg. Old definition said the following to emphasize the generic nature of this relation. We no longer have 'specifically denotes', which would have been primitive, so make this relation primitive. g denotes r =def r is a portion of reality there is some c that is a concretization of g every c that is a concretization of g specifically denotes r"""@en; "person:Alan Ruttenberg"@en; "Conversations with Barry Smith, Werner Ceusters, Bjoern Peters, Michel Dumontier, Melanie Courtot, James Malone, Bill Hogan"@en; rdfs:comment ""@en; rdfs:label "denotes"@en . a owl:ObjectProperty; rdfs:domain ; rdfs:range ; "inverse of the relation 'denotes'"@en; "Person: Jie Zheng, Chris Stoeckert, Mike Conlon"@en; ; rdfs:label "denoted by"@en . a owl:ObjectProperty; owl:equivalentProperty _:6839fa; rdfs:subPropertyOf ; rdfs:domain ; "has_specified_output", "has_specified_output"@en; ; "The inverse property of is_specified_output_of"@en; "PERSON: Alan Ruttenberg"@en, "PERSON: Bjoern Peters", "PERSON: Larry Hunter", "PERSON: Melanie Courtot"; ; rdfs:label "has_specified_output"@en . _:6839fa owl:inverseOf . a owl:ObjectProperty; rdfs:subPropertyOf ; rdfs:range ; "is_specified_output_of", "is_specified_output_of"@en; ; "A relation between a planned process and a continuant participating in that process. The presence of the continuant at the end of the process is explicitly specified in the objective specification which the process realizes the concretization of."@en; "Alan Ruttenberg"@en, "PERSON:Bjoern Peters"; ; rdfs:label "is_specified_output_of"@en . a owl:ObjectProperty, owl:FunctionalProperty; rdfs:subPropertyOf ; owl:inverseOf ; "inheres in"@en; "this fragility is a characteristic of this vase"@en, "this red color is a characteristic of this apple"@en; "a relation between a specifically dependent continuant (the characteristic) and any other entity (the bearer), in which the characteristic depends on the bearer for its existence."@en; "inheres_in"@en; ; rdfs:comment "Note that this relation was previously called \"inheres in\", but was changed to be called \"characteristic of\" because BFO2 uses \"inheres in\" in a more restricted fashion. This relation differs from BFO2:inheres_in in two respects: (1) it does not impose a range constraint, and thus it allows qualities of processes, as well as of information entities, whereas BFO2 restricts inheres_in to only apply to independent continuants (2) it is declared functional, i.e. something can only be a characteristic of one thing."; rdfs:label "characteristic of"@en . a owl:ObjectProperty, owl:InverseFunctionalProperty; rdfs:range ; "bearer of"@en; "this apple is bearer of this red color"@en, "this vase is bearer of this fragility"@en; "Inverse of characteristic_of"@en; "A bearer can have many dependents, and its dependents can exist for different periods of time, but none of its dependents can exist when the bearer does not exist."@en; "bearer_of"@en, "is bearer of"@en; ; rdfs:label "has characteristic"@en . a owl:ObjectProperty; owl:inverseOf ; rdfs:domain ; rdfs:range ; "participates in"@en; "this blood clot participates in this blood coagulation"@en, "this input material (or this output material) participates in this process"@en, "this investigator participates in this investigation"@en; "a relation between a continuant and a process, in which the continuant is somehow involved in the process"@en; "participates_in"@en; rdfs:label "participates in"@en . a owl:ObjectProperty; rdfs:domain ; rdfs:range ; owl:propertyChainAxiom _:683a0a; "has participant"@en; "this blood coagulation has participant this blood clot"@en, "this investigation has participant this investigator"@en, "this process has participant this input material (or this output material)"@en; "a relation between a process and a continuant, in which the continuant is somehow involved in the process"@en; "Has_participant is a primitive instance-level relation between a process, a continuant, and a time at which the continuant participates in some way in the process. The relation obtains, for example, when this particular process of oxygen exchange across this particular alveolar membrane has_participant this particular sample of hemoglobin at this particular time."@en; "has_participant"@en; "http://www.obofoundry.org/ro/#OBO_REL:has_participant"; rdfs:label "has participant"@en . _:683a0a rdf:first ; rdf:rest _:683a1a . _:683a1a rdf:first ; rdf:rest rdf:nil . a owl:ObjectProperty; rdfs:subPropertyOf ; owl:inverseOf ; rdfs:domain ; "this catalysis function is a function of this enzyme"@en; "a relation between a function and an independent continuant (the bearer), in which the function specifically depends on the bearer for its existence"@en; "A function inheres in its bearer at all times for which the function exists, however the function need not be realized at all the times that the function exists."@en; "function_of"@en, "is function of"@en; rdfs:comment "This relation is modeled after the BFO relation of the same name which was in BFO2, but is used in a more restricted sense - specifically, we model this relation as functional (inherited from characteristic-of). Note that this relation is now removed from BFO2020."; rdfs:label "function of"@en . a owl:ObjectProperty; rdfs:subPropertyOf ; owl:inverseOf ; "this red color is a quality of this apple"@en; "a relation between a quality and an independent continuant (the bearer), in which the quality specifically depends on the bearer for its existence"@en; "A quality inheres in its bearer at all times for which the quality exists."@en; "is quality of"@en, "quality_of"@en; rdfs:comment "This relation is modeled after the BFO relation of the same name which was in BFO2, but is used in a more restricted sense - specifically, we model this relation as functional (inherited from characteristic-of). Note that this relation is now removed from BFO2020."; rdfs:label "quality of"@en . a owl:ObjectProperty; rdfs:subPropertyOf ; owl:inverseOf ; "this investigator role is a role of this person"@en; "a relation between a role and an independent continuant (the bearer), in which the role specifically depends on the bearer for its existence"@en; "A role inheres in its bearer at all times for which the role exists, however the role need not be realized at all the times that the role exists."@en; "is role of"@en, "role_of"@en; rdfs:comment "This relation is modeled after the BFO relation of the same name which was in BFO2, but is used in a more restricted sense - specifically, we model this relation as functional (inherited from characteristic-of). Note that this relation is now removed from BFO2020."; rdfs:label "role of"@en . a owl:ObjectProperty; rdfs:subPropertyOf ; rdfs:domain ; rdfs:range ; "this enzyme has function this catalysis function (more colloquially: this enzyme has this catalysis function)"@en; "a relation between an independent continuant (the bearer) and a function, in which the function specifically depends on the bearer for its existence"@en; "A bearer can have many functions, and its functions can exist for different periods of time, but none of its functions can exist when the bearer does not exist. A function need not be realized at all the times that the function exists."@en; "has_function"@en; rdfs:label "has function"@en . a owl:ObjectProperty; rdfs:subPropertyOf ; rdfs:range ; "this apple has quality this red color"@en; "a relation between an independent continuant (the bearer) and a quality, in which the quality specifically depends on the bearer for its existence"@en; "A bearer can have many qualities, and its qualities can exist for different periods of time, but none of its qualities can exist when the bearer does not exist."@en; "has_quality"@en; rdfs:label "has quality"@en . a owl:ObjectProperty; rdfs:subPropertyOf ; rdfs:domain ; rdfs:range ; "this person has role this investigator role (more colloquially: this person has this role of investigator)"@en; "a relation between an independent continuant (the bearer) and a role, in which the role specifically depends on the bearer for its existence"@en; "A bearer can have many roles, and its roles can exist for different periods of time, but none of its roles can exist when the bearer does not exist. A role need not be realized at all the times that the role exists."@en; "has_role"@en; rdfs:label "has role"@en . a owl:ObjectProperty; rdfs:subPropertyOf ; owl:inverseOf ; rdfs:domain ; rdfs:range ; "a relation between an independent continuant (the bearer) and a disposition, in which the disposition specifically depends on the bearer for its existence"@en; rdfs:label "has disposition"@en . a owl:ObjectProperty; rdfs:subPropertyOf ; "inverse of has disposition"; ; rdfs:comment "This relation is modeled after the BFO relation of the same name which was in BFO2, but is used in a more restricted sense - specifically, we model this relation as functional (inherited from characteristic-of). Note that this relation is now removed from BFO2020."; rdfs:label "disposition of"@en . a owl:ObjectProperty; owl:inverseOf ; "this cell derives from this parent cell (cell division)"@en, "this nucleus derives from this parent nucleus (nuclear division)"@en; ; "a relation between two distinct material entities, the new entity and the old entity, in which the new entity begins to exist when the old entity ceases to exist, and the new entity inherits the significant portion of the matter of the old entity"@en; "This is a very general relation. More specific relations are preferred when applicable, such as 'directly develops from'."@en; "derives_from"@en; "This relation is taken from the RO2005 version of RO. It may be obsoleted and replaced by relations with different definitions. See also the 'develops from' family of relations."; ; rdfs:label "derives from"@en . a owl:ObjectProperty; "this parent cell derives into this cell (cell division)"@en, "this parent nucleus derives into this nucleus (nuclear division)"@en; ; "a relation between two distinct material entities, the old entity and the new entity, in which the new entity begins to exist when the old entity ceases to exist, and the new entity inherits the significant portion of the matter of the old entity"@en; "This is a very general relation. More specific relations are preferred when applicable, such as 'directly develops into'. To avoid making statements about a future that may not come to pass, it is often better to use the backward-looking 'derives from' rather than the forward-looking 'derives into'."@en; "derives_into"@en; ; rdfs:label "derives into"@en . a owl:ObjectProperty; owl:inverseOf ; rdfs:domain ; rdfs:range ; "contained in"@en; "Containment is location not involving parthood, and arises only where some immaterial continuant is involved.", "Containment obtains in each case between material and immaterial continuants, for instance: lung contained_in thoracic cavity; bladder contained_in pelvic cavity. Hence containment is not a transitive relation. If c part_of c1 at t then we have also, by our definition and by the axioms of mereology applied to spatial regions, c located_in c1 at t. Thus, many examples of instance-level location relations for continuants are in fact cases of instance-level parthood. For material continuants location and parthood coincide. Containment is location not involving parthood, and arises only where some immaterial continuant is involved. To understand this relation, we first define overlap for continuants as follows: c1 overlap c2 at t =def for some c, c part_of c1 at t and c part_of c2 at t. The containment relation on the instance level can then be defined (see definition):"@en, """Intended meaning: domain: material entity range: spatial region or site (immaterial continuant) """@en; "contained_in"@en; ; ; rdfs:label "contained in"@en . a owl:ObjectProperty; "contains"@en; ; ; rdfs:label "contains"@en . a owl:ObjectProperty; rdfs:subPropertyOf , ; "A 'has regulatory component activity' B if A and B are GO molecular functions (GO_0003674), A has_component B and A is regulated by B."; "dos"; "2017-05-24T09:30:46Z"^^xsd:dateTime; rdfs:label "has regulatory component activity" . a owl:ObjectProperty; rdfs:subPropertyOf , ; "A relationship that holds between a GO molecular function and a component of that molecular function that negatively regulates the activity of the whole. More formally, A 'has regulatory component activity' B iff :A and B are GO molecular functions (GO_0003674), A has_component B and A is negatively regulated by B."; "dos"; "2017-05-24T09:31:01Z"^^xsd:dateTime; rdfs:comment "By convention GO molecular functions are classified by their effector function. Internal regulatory functions are treated as components. For example, NMDA glutmate receptor activity is a cation channel activity with positive regulatory component 'glutamate binding' and negative regulatory components including 'zinc binding' and 'magnesium binding'."; rdfs:label "has negative regulatory component activity" . a owl:ObjectProperty; rdfs:subPropertyOf , ; "A relationship that holds between a GO molecular function and a component of that molecular function that positively regulates the activity of the whole. More formally, A 'has regulatory component activity' B iff :A and B are GO molecular functions (GO_0003674), A has_component B and A is positively regulated by B."; "dos"; "2017-05-24T09:31:17Z"^^xsd:dateTime; rdfs:comment "By convention GO molecular functions are classified by their effector function and internal regulatory functions are treated as components. So, for example calmodulin has a protein binding activity that has positive regulatory component activity calcium binding activity. Receptor tyrosine kinase activity is a tyrosine kinase activity that has positive regulatory component 'ligand binding'."; rdfs:label "has positive regulatory component activity" . a owl:ObjectProperty; rdfs:subPropertyOf ; "dos"; "2017-05-24T09:44:33Z"^^xsd:dateTime; rdfs:comment "A 'has component activity' B if A is A and B are molecular functions (GO_0003674) and A has_component B."; rdfs:label "has component activity" . a owl:ObjectProperty; rdfs:subPropertyOf ; rdfs:domain ; rdfs:range ; "w 'has process component' p if p and w are processes, w 'has part' p and w is such that it can be directly disassembled into into n parts p, p2, p3, ..., pn, where these parts are of similar type."; "dos"; "2017-05-24T09:49:21Z"^^xsd:dateTime; rdfs:label "has component process" . a owl:ObjectProperty; rdfs:subPropertyOf ; owl:inverseOf ; "dos"; "2017-09-17T13:52:24Z"^^xsd:dateTime; rdfs:comment "Process(P2) is directly regulated by process(P1) iff: P1 regulates P2 via direct physical interaction between an agent executing P1 (or some part of P1) and an agent executing P2 (or some part of P2). For example, if protein A has protein binding activity(P1) that targets protein B and this binding regulates the kinase activity (P2) of protein B then P1 directly regulates P2."; rdfs:label "directly regulated by" . _:683a2a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty rdfs:comment; owl:annotatedTarget "Process(P2) is directly regulated by process(P1) iff: P1 regulates P2 via direct physical interaction between an agent executing P1 (or some part of P1) and an agent executing P2 (or some part of P2). For example, if protein A has protein binding activity(P1) that targets protein B and this binding regulates the kinase activity (P2) of protein B then P1 directly regulates P2."; "GOC:dos" . a owl:ObjectProperty; rdfs:subPropertyOf ; owl:inverseOf ; "Process(P2) is directly negatively regulated by process(P1) iff: P1 negatively regulates P2 via direct physical interaction between an agent executing P1 (or some part of P1) and an agent executing P2 (or some part of P2). For example, if protein A has protein binding activity(P1) that targets protein B and this binding negatively regulates the kinase activity (P2) of protein B then P2 directly negatively regulated by P1."; "dos"; "2017-09-17T13:52:38Z"^^xsd:dateTime; rdfs:label "directly negatively regulated by" . _:683a3a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Process(P2) is directly negatively regulated by process(P1) iff: P1 negatively regulates P2 via direct physical interaction between an agent executing P1 (or some part of P1) and an agent executing P2 (or some part of P2). For example, if protein A has protein binding activity(P1) that targets protein B and this binding negatively regulates the kinase activity (P2) of protein B then P2 directly negatively regulated by P1."; "GOC:dos" . a owl:ObjectProperty; rdfs:subPropertyOf ; owl:inverseOf ; "Process(P2) is directly postively regulated by process(P1) iff: P1 positively regulates P2 via direct physical interaction between an agent executing P1 (or some part of P1) and an agent executing P2 (or some part of P2). For example, if protein A has protein binding activity(P1) that targets protein B and this binding positively regulates the kinase activity (P2) of protein B then P2 is directly postively regulated by P1."; "dos"; "2017-09-17T13:52:47Z"^^xsd:dateTime; rdfs:label "directly positively regulated by" . _:683a4a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Process(P2) is directly postively regulated by process(P1) iff: P1 positively regulates P2 via direct physical interaction between an agent executing P1 (or some part of P1) and an agent executing P2 (or some part of P2). For example, if protein A has protein binding activity(P1) that targets protein B and this binding positively regulates the kinase activity (P2) of protein B then P2 is directly postively regulated by P1."; "GOC:dos" . a owl:ObjectProperty, owl:FunctionalProperty; rdfs:subPropertyOf ; "A 'has effector activity' B if A and B are GO molecular functions (GO_0003674), A 'has component activity' B and B is the effector (output function) of B. Each compound function has only one effector activity."; "dos"; "2017-09-22T14:14:36Z"^^xsd:dateTime; rdfs:comment "This relation is designed for constructing compound molecular functions, typically in combination with one or more regulatory component activity relations."; rdfs:label "has effector activity" . _:683a5a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "A 'has effector activity' B if A and B are GO molecular functions (GO_0003674), A 'has component activity' B and B is the effector (output function) of B. Each compound function has only one effector activity."; "GOC:dos" . a owl:ObjectProperty, owl:TransitiveProperty; rdfs:subPropertyOf ; "David Osumi-Sutherland"; ; rdfs:comment "X ends_after Y iff: end(Y) before_or_simultaneous_with end(X)"@en; rdfs:label "ends after"@en . a owl:ObjectProperty; rdfs:subPropertyOf ; owl:inverseOf ; "David Osumi-Sutherland"; "starts_at_end_of"; rdfs:comment "X immediately_preceded_by Y iff: end(X) simultaneous_with start(Y)"@en; rdfs:label "immediately preceded by"@en . a owl:ObjectProperty; rdfs:subPropertyOf ; , "David Osumi-Sutherland"; "ends_at_start_of", "meets"; ; ; rdfs:comment "X immediately_precedes_Y iff: end(X) simultaneous_with start(Y)"@en; rdfs:label "immediately precedes"@en . a owl:ObjectProperty, owl:TransitiveProperty; rdfs:subPropertyOf ; "RO:0002092"; "external"; "happens_during"; "happens_during"; rdfs:label "happens during" . a owl:ObjectProperty; "RO:0002093"; "external"; "ends_during"; "ends_during"; rdfs:label "ends during" . a owl:ObjectProperty, owl:SymmetricProperty; rdfs:subPropertyOf ; owl:propertyChainAxiom _:683a6a, _:683a8a, _:683aaa, _:683aca; ; "x overlaps y if and only if there exists some z such that x has part z and z part of y", "x overlaps y iff they have some part in common."; "http://purl.obolibrary.org/obo/BFO_0000051 some (http://purl.obolibrary.org/obo/BFO_0000050 some ?Y)"; ; "RO:0002131"; "spatial"; "overlaps"; , , ; "overlaps"; rdfs:comment "\"(forall (x y) (iff (overlaps x y) (exists (z) (and (part of z x) (part of z y)))))\" CLIF []"; rdfs:label "overlaps", "overlaps"@en . _:683a6a rdf:first ; rdf:rest _:683a7a . _:683a7a rdf:first ; rdf:rest rdf:nil . _:683a8a rdf:first ; rdf:rest _:683a9a . _:683a9a rdf:first ; rdf:rest rdf:nil . _:683aaa rdf:first ; rdf:rest _:683aba . _:683aba rdf:first ; rdf:rest rdf:nil . _:683aca rdf:first ; rdf:rest _:683ada . _:683ada rdf:first ; rdf:rest rdf:nil . _:683aea a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty owl:propertyChainAxiom; owl:annotatedTarget _:683afa; true . _:683afa rdf:first ; rdf:rest _:683b0a . _:683b0a rdf:first ; rdf:rest rdf:nil . _:683b1a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "x overlaps y iff they have some part in common."; "BSPO:cjm" . a owl:ObjectProperty; rdfs:subPropertyOf ; ; "A is spatially_disjoint_from B if and only if they have no parts in common"; "There are two ways to encode this as a shortcut relation. The other possibility to use an annotation assertion between two classes, and expand this to a disjointness axiom. "@en; , "Chris Mungall"@en; ; "Note that it would be possible to use the relation to label the relationship between a near infinite number of structures - between the rings of saturn and my left earlobe. The intent is that this is used for parsiomoniously for disambiguation purposes - for example, between siblings in a jointly exhaustive pairwise disjointness hierarchy"; "BFO_0000051 exactly 0 (BFO_0000050 some ?Y)"; ; ; rdfs:label "spatially disjoint from"; rdfs:seeAlso "https://github.com/obophenotype/uberon/wiki/Part-disjointness-Design-Pattern"^^xsd:anyURI . a owl:ObjectProperty; rdfs:subPropertyOf ; ; "w 'has component' p if w 'has part' p and w is such that it can be directly disassembled into into n parts p, p2, p3, ..., pn, where these parts are of similar type."; "The definition of 'has component' is still under discussion. The challenge is in providing a definition that does not imply transitivity."; "For use in recording has_part with a cardinality constraint, because OWL does not permit cardinality constraints to be used in combination with transitive object properties. In situations where you would want to say something like 'has part exactly 5 digit, you would instead use has_component exactly 5 digit."@en; ; ; rdfs:label "has component"@en; rdfs:seeAlso . a owl:ObjectProperty, owl:TransitiveProperty; rdfs:subPropertyOf ; owl:inverseOf ; rdfs:domain ; rdfs:range ; ; "x develops from y if and only if either (a) x directly develops from y or (b) there exists some z such that x directly develops from z and z develops from y"; , , , ; rdfs:comment "This is the transitive form of the develops from relation"; rdfs:label "develops from"@en . a owl:ObjectProperty, owl:TransitiveProperty; rdfs:subPropertyOf , , ; ; "inverse of develops from"; , , ; ; rdfs:label "develops into"@en . a owl:ObjectProperty, owl:TransitiveProperty; rdfs:subPropertyOf ; owl:inverseOf ; rdfs:domain ; rdfs:range ; owl:propertyChainAxiom _:683b2a, _:683b4a; "p regulates q iff p is causally upstream of q, the execution of p is not constant and varies according to specific conditions, and p influences the rate or magnitude of execution of q due to an effect either on some enabler of q or some enabler of a part of q."; , , , "Chris Mungall", "David Hill", "Tanya Berardini"; , "GO"; "Regulation precludes parthood; the regulatory process may not be within the regulated process."; "regulates (processual)"; false; , , ; rdfs:label "regulates"@en . _:683b2a rdf:first ; rdf:rest _:683b3a . _:683b3a rdf:first ; rdf:rest rdf:nil . _:683b4a rdf:first ; rdf:rest _:683b5a . _:683b5a rdf:first ; rdf:rest rdf:nil . a owl:ObjectProperty; rdfs:subPropertyOf , ; owl:inverseOf ; "p negatively regulates q iff p regulates q, and p decreases the rate or magnitude of execution of q."; , "Chris Mungall"@en; ; "negatively regulates (process to process)"; ; , , ; rdfs:label "negatively regulates"@en . a owl:ObjectProperty, owl:TransitiveProperty; rdfs:subPropertyOf , ; owl:inverseOf ; owl:propertyChainAxiom _:683b6a; "p positively regulates q iff p regulates q, and p increases the rate or magnitude of execution of q."; , "Chris Mungall"@en; ; "positively regulates (process to process)"; ; , , ; rdfs:label "positively regulates"@en . _:683b6a rdf:first ; rdf:rest _:683b7a . _:683b7a rdf:first ; rdf:rest rdf:nil . a owl:ObjectProperty; rdfs:subPropertyOf ; rdfs:domain ; rdfs:range ; "mechanosensory neuron capable of detection of mechanical stimulus involved in sensory perception (GO:0050974)", "osteoclast SubClassOf 'capable of' some 'bone resorption'"; "A relation between a material entity (such as a cell) and a process, in which the material entity has the ability to carry out the process. "; , "Chris Mungall"; "has function realized in"; , ; "For compatibility with BFO, this relation has a shortcut definition in which the expression \"capable of some P\" expands to \"bearer_of (some realized_by only P)\"."; ; rdfs:label "capable of"@en . a owl:ObjectProperty; rdfs:subPropertyOf , ; owl:propertyChainAxiom _:683b8a; "c stands in this relationship to p if and only if there exists some p' such that c is capable_of p', and p' is part_of p."; , "Chris Mungall"; "has function in"; rdfs:label "capable of part of"@en; rdfs:seeAlso . _:683b8a rdf:first ; rdf:rest _:683b9a . _:683b9a rdf:first ; rdf:rest rdf:nil . _:683baa a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty owl:propertyChainAxiom; owl:annotatedTarget _:683bba; true . _:683bba rdf:first ; rdf:rest _:683bca . _:683bca rdf:first ; rdf:rest rdf:nil . a owl:ObjectProperty, owl:SymmetricProperty; rdfs:subPropertyOf ; rdfs:domain ; rdfs:range ; "A caterpillar walking on the surface of a leaf is adjacent_to the leaf, if one of the caterpillar appendages is touching the leaf. In contrast, a butterfly flying close to a flower is not considered adjacent, unless there are any touching parts.", "The epidermis layer of a vertebrate is adjacent to the dermis.", "The plasma membrane of a cell is adjacent to the cytoplasm, and also to the cell lumen which the cytoplasm occupies.", "The skin of the forelimb is adjacent to the skin of the torso if these are considered anatomical subdivisions with a defined border. Otherwise a relation such as continuous_with would be used."; ; "x adjacent to y if and only if x and y share a boundary."; "This relation acts as a join point with BSPO"; , "Chris Mungall"; ; "RO:0002220"; "spatial"; "adjacent_to"; , , ; "adjacent_to"; rdfs:label "adjacent to", "adjacent to"@en . _:683bda a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "A caterpillar walking on the surface of a leaf is adjacent_to the leaf, if one of the caterpillar appendages is touching the leaf. In contrast, a butterfly flying close to a flower is not considered adjacent, unless there are any touching parts."; rdfs:seeAlso . a owl:ObjectProperty; rdfs:domain ; rdfs:range ; ; , "Chris Mungall"; ; "Do not use this relation directly. It is ended as a grouping for relations between occurrents involving the relative timing of their starts and ends."; "https://docs.google.com/document/d/1kBv1ep_9g3sTR-SD3jqzFqhuwo9TPNF-l-9fUDbO6rM/edit?pli=1"^^xsd:anyURI; ; rdfs:comment "A relation that holds between two occurrents. This is a grouping relation that collects together all the Allen relations."; rdfs:label "temporally related to"@en . a owl:ObjectProperty; rdfs:subPropertyOf ; owl:inverseOf ; rdfs:domain ; ; "p has input c iff: p is a process, c is a material entity, c is a participant in p, c is present at the start of p, and the state of c is modified during p."; , "Chris Mungall"; "consumes"; , , , ; rdfs:label "has input"@en . a owl:ObjectProperty; rdfs:subPropertyOf ; owl:inverseOf ; rdfs:domain ; rdfs:range ; owl:propertyChainAxiom _:683bea; "Mammalian thymus has developmental contribution from some pharyngeal pouch 3; Mammalian thymus has developmental contribution from some pharyngeal pouch 4 [Kardong]"; ; "x has developmental contribution from y iff x has some part z such that z develops from y"@en; ; rdfs:label "has developmental contribution from"@en . _:683bea rdf:first ; rdf:rest _:683bfa . _:683bfa rdf:first ; rdf:rest rdf:nil . a owl:ObjectProperty; rdfs:subPropertyOf , ; owl:propertyChainAxiom _:683c0a; ; "inverse of has developmental contribution from"; ; ; rdfs:label "developmentally contributes to"@en . _:683c0a rdf:first ; rdf:rest _:683c1a . _:683c1a rdf:first ; rdf:rest rdf:nil . a owl:ObjectProperty; rdfs:subPropertyOf ; owl:inverseOf ; rdfs:domain ; rdfs:range ; ; "Candidate definition: x developmentally related to y if and only if there exists some developmental process (GO:0032502) p such that x and y both participates in p, and x is the output of p and y is the input of p"; false; ; "In general you should not use this relation to make assertions - use one of the more specific relations below this one"; rdfs:comment "This relation groups together various other developmental relations. It is fairly generic, encompassing induction, developmental contribution and direct and transitive develops from"; rdfs:label "developmentally preceded by"@en . a owl:ObjectProperty; rdfs:subPropertyOf ; owl:propertyChainAxiom _:683c2a; "A faulty traffic light (material entity) whose malfunctioning (a process) is causally upstream of a traffic collision (a process): the traffic light acts upstream of the collision."; "c acts upstream of p if and only if c enables some f that is involved in p' and p' occurs chronologically before p, is not part of p, and affects the execution of p. c is a material entity and f, p, p' are processes."; ; rdfs:label "acts upstream of"; rdfs:seeAlso . _:683c2a rdf:first ; rdf:rest _:683c3a . _:683c3a rdf:first ; rdf:rest rdf:nil . a owl:ObjectProperty; rdfs:subPropertyOf ; owl:propertyChainAxiom _:683c4a; "A gene product that has some activity, where that activity may be a part of a pathway or upstream of the pathway."; "c acts upstream of or within p if c is enables f, and f is causally upstream of or within p. c is a material entity and p is an process."; "affects"; ; rdfs:label "acts upstream of or within"; rdfs:seeAlso . _:683c4a rdf:first ; rdf:rest _:683c5a . _:683c5a rdf:first ; rdf:rest rdf:nil . a owl:ObjectProperty; rdfs:subPropertyOf ; ; "Inverse of developmentally preceded by"; ; rdfs:label "developmentally succeeded by"@en . a owl:ObjectProperty; rdfs:subPropertyOf , ; "p is causally upstream of, positive effect q iff p is casually upstream of q, and the execution of p is required for the execution of q."; ; , "cjm"; , ; rdfs:comment "holds between x and y if and only if x is causally upstream of y and the progression of x increases the frequency, rate or extent of y"; rdfs:label "causally upstream of, positive effect" . a owl:ObjectProperty; rdfs:subPropertyOf , ; "p is causally upstream of, negative effect q iff p is casually upstream of q, and the execution of p decreases the execution of q."; ; , "cjm"; , ; rdfs:label "causally upstream of, negative effect" . a owl:ObjectProperty; rdfs:subPropertyOf ; owl:propertyChainAxiom _:683c6a, _:683c8a; "q characteristic of part of w if and only if there exists some p such that q inheres in p and p part of w."; "Because part_of is transitive, inheres in is a sub-relation of characteristic of part of"; , "Chris Mungall"; "inheres in part of"; ; ; rdfs:label "characteristic of part of"@en; rdfs:seeAlso . _:683c6a rdf:first ; rdf:rest _:683c7a . _:683c7a rdf:first ; rdf:rest rdf:nil . _:683c8a rdf:first ; rdf:rest _:683c9a . _:683c9a rdf:first ; rdf:rest rdf:nil . _:683caa a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty owl:propertyChainAxiom; owl:annotatedTarget _:683cba; true . _:683cba rdf:first ; rdf:rest _:683cca . _:683cca rdf:first ; rdf:rest rdf:nil . a owl:ObjectProperty; "A mereological relationship or a topological relationship"; , "Chris Mungall"; "Do not use this relation directly. It is ended as a grouping for a diverse set of relations, all involving parthood or connectivity relationships"; ; rdfs:label "mereotopologically related to"@en . a owl:ObjectProperty; "A relationship that holds between entities participating in some developmental process (GO:0032502)"; ; "Do not use this relation directly. It is ended as a grouping for a diverse set of relations, all involving organismal development"; rdfs:label "developmentally related to"@en . a owl:ObjectProperty; rdfs:subPropertyOf ; owl:inverseOf ; owl:propertyChainAxiom _:683cda, _:683cfa; "a particular instances of akt-2 enables some instance of protein kinase activity"; "c enables p iff c is capable of p and c acts to execute p."; , "Chris Mungall"; "catalyzes", "executes", "has", "is catalyzing", "is executing"; "This relation differs from the parent relation 'capable of' in that the parent is weaker and only expresses a capability that may not be actually realized, whereas this relation is always realized."; ; rdfs:label "enables"@en . _:683cda rdf:first ; rdf:rest _:683cea . _:683cea rdf:first ; rdf:rest rdf:nil . _:683cfa rdf:first ; rdf:rest _:683d0a . _:683d0a rdf:first ; rdf:rest rdf:nil . a owl:ObjectProperty; "A grouping relationship for any relationship directly involving a function, or that holds because of a function of one of the related entities."; , "Chris Mungall"; "This is a grouping relation that collects relations used for the purpose of connecting structure and function"; rdfs:label "functionally related to"@en . a owl:ObjectProperty; rdfs:subPropertyOf ; owl:propertyChainAxiom _:683d1a; "this relation holds between c and p when c is part of some c', and c' is capable of p."; , "Chris Mungall"; false; rdfs:label "part of structure that is capable of"@en . _:683d1a rdf:first ; rdf:rest _:683d2a . _:683d2a rdf:first ; rdf:rest rdf:nil . _:683d3a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty owl:propertyChainAxiom; owl:annotatedTarget _:683d4a; true . _:683d4a rdf:first ; rdf:rest _:683d5a . _:683d5a rdf:first ; rdf:rest rdf:nil . a owl:ObjectProperty; rdfs:subPropertyOf , ; owl:propertyChainAxiom _:683d6a, _:683d8a; "c involved_in p if and only if c enables some process p', and p' is part of p"; , "Chris Mungall"; "actively involved in", "enables part of"; rdfs:label "involved in"@en; rdfs:seeAlso . _:683d6a rdf:first ; rdf:rest _:683d7a . _:683d7a rdf:first ; rdf:rest rdf:nil . _:683d8a rdf:first ; rdf:rest _:683d9a . _:683d9a rdf:first ; rdf:rest rdf:nil . a owl:ObjectProperty; rdfs:subPropertyOf , ; "inverse of enables"; , "Chris Mungall"; ; rdfs:label "enabled by"@en . a owl:ObjectProperty, owl:TransitiveProperty; rdfs:subPropertyOf ; rdfs:domain ; rdfs:range ; "inverse of regulates"; , "Chris Mungall"; "regulated by (processual)"; ; rdfs:label "regulated by"@en . a owl:ObjectProperty; rdfs:subPropertyOf ; "inverse of negatively regulates"; , "Chris Mungall"; ; rdfs:label "negatively regulated by"@en . a owl:ObjectProperty; rdfs:subPropertyOf ; "inverse of positively regulates"; , "Chris Mungall"; ; rdfs:label "positively regulated by"@en . a owl:ObjectProperty; rdfs:subPropertyOf , ; "inverse of has input"; , "Chris Mungall"; , ; rdfs:label "input of"@en . a owl:ObjectProperty; rdfs:subPropertyOf ; rdfs:domain ; rdfs:range ; ; "x has developmental potential involving y iff x is capable of a developmental process with output y. y may be the successor of x, or may be a different structure in the vicinity (as for example in the case of developmental induction)."@en; ; rdfs:label "has developmental potential involving"@en . a owl:ObjectProperty; rdfs:subPropertyOf ; ; "x has potential to developmentrally contribute to y iff x developmentally contributes to y or x is capable of developmentally contributing to y"@en; ; rdfs:label "has potential to developmentally contribute to"@en . a owl:ObjectProperty; rdfs:subPropertyOf ; ; "x has the potential to develop into y iff x develops into y or if x is capable of developing into y"@en; ; rdfs:label "has potential to develop into"@en . a owl:ObjectProperty; rdfs:subPropertyOf ; ; "x has potential to directly develop into y iff x directly develops into y or x is capable of directly developing into y"@en; ; rdfs:label "has potential to directly develop into"@en . a owl:ObjectProperty; rdfs:subPropertyOf , ; owl:inverseOf ; ; "inverse of upstream of"; , "Chris Mungall"; rdfs:label "causally downstream of"@en . a owl:ObjectProperty; rdfs:subPropertyOf , ; owl:inverseOf ; ; , "Chris Mungall"; rdfs:label "immediately causally downstream of"@en . a owl:ObjectProperty, owl:TransitiveProperty; rdfs:subPropertyOf , ; owl:propertyChainAxiom _:683daa, _:683dca, _:683dea, _:683e0a; "p indirectly positively regulates q iff p is indirectly causally upstream of q and p positively regulates q."; , "Chris Mungall"; "indirectly activates"; ; rdfs:label "indirectly positively regulates"@en . _:683daa rdf:first ; rdf:rest _:683dba . _:683dba rdf:first ; rdf:rest rdf:nil . _:683dca rdf:first ; rdf:rest _:683dda . _:683dda rdf:first ; rdf:rest rdf:nil . _:683dea rdf:first ; rdf:rest _:683dfa . _:683dfa rdf:first ; rdf:rest rdf:nil . _:683e0a rdf:first ; rdf:rest _:683e1a . _:683e1a rdf:first ; rdf:rest rdf:nil . a owl:ObjectProperty, owl:TransitiveProperty; rdfs:subPropertyOf , ; owl:propertyChainAxiom _:683e2a, _:683e4a, _:683e6a; "p indirectly negatively regulates q iff p is indirectly causally upstream of q and p negatively regulates q."; , "Chris Mungall"; "indirectly inhibits"; ; rdfs:label "indirectly negatively regulates"@en . _:683e2a rdf:first ; rdf:rest _:683e3a . _:683e3a rdf:first ; rdf:rest rdf:nil . _:683e4a rdf:first ; rdf:rest _:683e5a . _:683e5a rdf:first ; rdf:rest rdf:nil . _:683e6a rdf:first ; rdf:rest _:683e7a . _:683e7a rdf:first ; rdf:rest rdf:nil . a owl:ObjectProperty; "relation that links two events, processes, states, or objects such that one event, process, state, or object (a cause) contributes to the production of another event, process, state, or object (an effect) where the cause is partly or wholly responsible for the effect, and the effect is partly or wholly dependent on the cause."; """This branch of the ontology deals with causal relations between entities. It is divided into two branches: causal relations between occurrents/processes, and causal relations between material entities. We take an 'activity flow-centric approach', with the former as primary, and define causal relations between material entities in terms of causal relations between occurrents. To define causal relations in an activity-flow type network, we make use of 3 primitives: * Temporal: how do the intervals of the two occurrents relate? * Is the causal relation regulatory? * Is the influence positive or negative? The first of these can be formalized in terms of the Allen Interval Algebra. Informally, the 3 bins we care about are 'direct', 'indirect' or overlapping. Note that all causal relations should be classified under a RO temporal relation (see the branch under 'temporally related to'). Note that all causal relations are temporal, but not all temporal relations are causal. Two occurrents can be related in time without being causally connected. We take causal influence to be primitive, elucidated as being such that has the upstream changed, some qualities of the donwstream would necessarily be modified. For the second, we consider a relationship to be regulatory if the system in which the activities occur is capable of altering the relationship to achieve some objective. This could include changing the rate of production of a molecule. For the third, we consider the effect of the upstream process on the output(s) of the downstream process. If the level of output is increased, or the rate of production of the output is increased, then the direction is increased. Direction can be positive, negative or neutral or capable of either direction. Two positives in succession yield a positive, two negatives in succession yield a positive, otherwise the default assumption is that the net effect is canceled and the influence is neutral. Each of these 3 primitives can be composed to yield a cross-product of different relation types."""; , "Chris Mungall"; "Do not use this relation directly. It is intended as a grouping for a diverse set of relations, all involving cause and effect."; rdfs:label "causally related to"@en . _:683e8a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "relation that links two events, processes, states, or objects such that one event, process, state, or object (a cause) contributes to the production of another event, process, state, or object (an effect) where the cause is partly or wholly responsible for the effect, and the effect is partly or wholly dependent on the cause."; "https://en.wikipedia.org/wiki/Causality" . a owl:ObjectProperty, owl:TransitiveProperty; rdfs:subPropertyOf , ; "p is causally upstream of q iff p is causally related to q, the end of p precedes the end of q, and p is not an occurrent part of q."; , "Chris Mungall"; , ; rdfs:label "causally upstream of"@en . a owl:ObjectProperty; rdfs:subPropertyOf , ; "p is immediately causally upstream of q iff p is causally upstream of q, and the end of p is coincident with the beginning of q."; , "Chris Mungall"; ; rdfs:label "immediately causally upstream of"@en . a owl:ObjectProperty, owl:TransitiveProperty; rdfs:subPropertyOf ; owl:inverseOf ; "p is 'causally upstream or within' q iff p is causally related to q, and the end of p precedes, or is coincident with, the end of q."; "We would like to make this disjoint with 'preceded by', but this is prohibited in OWL2"; , "Chris Mungall"; "influences (processual)"; "affects"; rdfs:label "causally upstream of or within" . a owl:ObjectProperty, owl:TransitiveProperty; rdfs:subPropertyOf ; "inverse of causally upstream of or within"; , "Chris Mungall"; ; ; rdfs:label "causally downstream of or within" . a owl:ObjectProperty; rdfs:subPropertyOf , ; owl:propertyChainAxiom _:683e9a, _:683eba; "c involved in regulation of p if c is involved in some p' and p' regulates some p"; , "Chris Mungall"; rdfs:label "involved in regulation of" . _:683e9a rdf:first ; rdf:rest _:683eaa . _:683eaa rdf:first ; rdf:rest rdf:nil . _:683eba rdf:first ; rdf:rest _:683eca . _:683eca rdf:first ; rdf:rest rdf:nil . a owl:ObjectProperty; rdfs:subPropertyOf ; owl:propertyChainAxiom _:683eda, _:683efa; "c involved in regulation of p if c is involved in some p' and p' positively regulates some p"; , "Chris Mungall"; ; rdfs:label "involved in positive regulation of" . _:683eda rdf:first ; rdf:rest _:683eea . _:683eea rdf:first ; rdf:rest rdf:nil . _:683efa rdf:first ; rdf:rest _:683f0a . _:683f0a rdf:first ; rdf:rest rdf:nil . a owl:ObjectProperty; rdfs:subPropertyOf ; owl:propertyChainAxiom _:683f1a, _:683f3a; "c involved in regulation of p if c is involved in some p' and p' negatively regulates some p"; , "Chris Mungall"; ; rdfs:label "involved in negative regulation of" . _:683f1a rdf:first ; rdf:rest _:683f2a . _:683f2a rdf:first ; rdf:rest rdf:nil . _:683f3a rdf:first ; rdf:rest _:683f4a . _:683f4a rdf:first ; rdf:rest rdf:nil . a owl:ObjectProperty; rdfs:subPropertyOf , , ; "c involved in or regulates p if and only if either (i) c is involved in p or (ii) c is involved in regulation of p"; "OWL does not allow defining object properties via a Union"; , "Chris Mungall"; "involved in or reguates"; rdfs:label "involved in or involved in regulation of" . a owl:ObjectProperty; rdfs:subPropertyOf , ; owl:propertyChainAxiom _:683f5a; "A protein that enables activity in a cytosol."; "c executes activity in d if and only if c enables p and p occurs_in d. Assuming no action at a distance by gene products, if a gene product enables (is capable of) a process that occurs in some structure, it must have at least some part in that structure."; ; "executes activity in"; "enables activity in"; rdfs:comment ""; rdfs:label "is active in" . _:683f5a rdf:first ; rdf:rest _:683f6a . _:683f6a rdf:first ; rdf:rest rdf:nil . _:683f7a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty owl:propertyChainAxiom; owl:annotatedTarget _:683f8a; true . _:683f8a rdf:first ; rdf:rest _:683f9a . _:683f9a rdf:first ; rdf:rest rdf:nil . _:683faa a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "c executes activity in d if and only if c enables p and p occurs_in d. Assuming no action at a distance by gene products, if a gene product enables (is capable of) a process that occurs in some structure, it must have at least some part in that structure."; "GOC:cjm", "GOC:dos" . a owl:ObjectProperty, owl:SymmetricProperty; rdfs:domain ; rdfs:range ; "A relationship that holds between two entities in which the processes executed by the two entities are causally connected."; "This relation and all sub-relations can be applied to either (1) pairs of entities that are interacting at any moment of time (2) populations or species of entity whose members have the disposition to interact (3) classes whose members have the disposition to interact.", "Considering relabeling as 'pairwise interacts with'"^^xsd:anyURI; , "Chris Mungall"; "Note that this relationship type, and sub-relationship types may be redundant with process terms from other ontologies. For example, the symbiotic relationship hierarchy parallels GO. The relations are provided as a convenient shortcut. Consider using the more expressive processual form to capture your data. In the future, these relations will be linked to their cognate processes through rules."; "in pairwise interaction with"; ; rdfs:label "interacts with"; rdfs:seeAlso "http://purl.obolibrary.org/obo/ro/docs/interaction-relations/"^^xsd:anyURI; "http://purl.obolibrary.org/obo/MI_0914"^^xsd:anyURI . a owl:ObjectProperty, owl:SymmetricProperty; rdfs:subPropertyOf ; "An interaction relationship in which the two partners are molecular entities that directly physically interact with each other for example via a stable binding interaction or a brief interaction during which one modifies the other."; , "Chris Mungall"; "binds", "molecularly binds with"; rdfs:label "molecularly interacts with"; rdfs:seeAlso ; "http://purl.obolibrary.org/obo/MI_0915"^^xsd:anyURI . a owl:ObjectProperty; rdfs:subPropertyOf ; "Axiomatization to GO to be added later"; , "Chris Mungall"; "An interaction relation between x and y in which x catalyzes a reaction in which a phosphate group is added to y."; rdfs:label "phosphorylates" . a owl:ObjectProperty; rdfs:subPropertyOf , ; rdfs:domain ; rdfs:range ; owl:propertyChainAxiom _:683fba; """The entity A, immediately upstream of the entity B, has an activity that regulates an activity performed by B. For example, A and B may be gene products and binding of B by A regulates the kinase activity of B. A and B can be physically interacting but not necessarily. Immediately upstream means there are no intermediate entity between A and B."""; , , "Chris Mungall", "Vasundra Touré"; "molecularly controls"; rdfs:label "directly regulates activity of" . _:683fba rdf:first ; rdf:rest _:683fca . _:683fca rdf:first ; rdf:rest _:683fda . _:683fda rdf:first ; rdf:rest rdf:nil . a owl:ObjectProperty; rdfs:subPropertyOf ; rdfs:domain ; rdfs:range ; owl:propertyChainAxiom _:683fea; """The entity A, immediately upstream of the entity B, has an activity that negatively regulates an activity performed by B. For example, A and B may be gene products and binding of B by A negatively regulates the kinase activity of B."""; , , "Chris Mungall", "Vasundra Touré"; "directly inhibits"; "molecularly decreases activity of"; rdfs:label "directly negatively regulates activity of" . _:683fea rdf:first ; rdf:rest _:683ffa . _:683ffa rdf:first ; rdf:rest _:68400a . _:68400a rdf:first ; rdf:rest rdf:nil . a owl:ObjectProperty; rdfs:subPropertyOf ; rdfs:domain ; rdfs:range ; owl:propertyChainAxiom _:68401a; """The entity A, immediately upstream of the entity B, has an activity that positively regulates an activity performed by B. For example, A and B may be gene products and binding of B by A positively regulates the kinase activity of B."""; , , "Chris Mungall", "Vasundra Touré"; "directly activates"; "molecularly increases activity of"; rdfs:label "directly positively regulates activity of" . _:68401a rdf:first ; rdf:rest _:68402a . _:68402a rdf:first ; rdf:rest _:68403a . _:68403a rdf:first ; rdf:rest rdf:nil . a owl:ObjectProperty; , "Chris Mungall"; "This property or its subproperties is not to be used directly. These properties exist as helper properties that are used to support OWL reasoning."; rdfs:label "helper property (not for use in curation)" . a owl:ObjectProperty; rdfs:domain ; rdfs:range ; owl:propertyChainAxiom _:68404a; "p has part that occurs in c if and only if there exists some p1, such that p has_part p1, and p1 occurs in c."; ; ; rdfs:label "has part that occurs in" . _:68404a rdf:first ; rdf:rest _:68405a . _:68405a rdf:first ; rdf:rest rdf:nil . _:68406a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty owl:propertyChainAxiom; owl:annotatedTarget _:68407a; true . _:68407a rdf:first ; rdf:rest _:68408a . _:68408a rdf:first ; rdf:rest rdf:nil . a owl:ObjectProperty; rdfs:subPropertyOf ; , "Chris Mungall"; rdfs:label "is kinase activity" . a owl:ObjectProperty; rdfs:domain ; rdfs:range ; ; "Do not use this relation directly. It is ended as a grouping for a diverse set of relations, typically connecting an anatomical entity to a biological process or developmental stage."; rdfs:label "relation between physical entity and a process or stage" . a owl:ObjectProperty; rdfs:subPropertyOf ; "x existence overlaps y if and only if either (a) the start of x is part of y or (b) the end of x is part of y. Formally: x existence starts and ends during y iff (α(x) >= α(y) & α(x) <= ω(y)) OR (ω(x) <= ω(y) & ω(x) >= α(y))"; ; rdfs:comment "The relations here were created based on work originally by Fabian Neuhaus and David Osumi-Sutherland. The work has not yet been vetted and errors in definitions may have occurred during transcription."; rdfs:label "existence overlaps" . a owl:ObjectProperty; rdfs:subPropertyOf ; owl:propertyChainAxiom _:68409a, _:6840ba, _:6840da, _:6840fa; "x existence starts during or after y if and only if the time point at which x starts is after or equivalent to the time point at which y starts. Formally: x existence starts during or after y iff α (x) >= α (y)."; ; rdfs:comment "The relations here were created based on work originally by Fabian Neuhaus and David Osumi-Sutherland. The work has not yet been vetted and errors in definitions may have occurred during transcription."; rdfs:label "existence starts during or after" . _:68409a rdf:first ; rdf:rest _:6840aa . _:6840aa rdf:first ; rdf:rest rdf:nil . _:6840ba rdf:first ; rdf:rest _:6840ca . _:6840ca rdf:first ; rdf:rest rdf:nil . _:6840da rdf:first ; rdf:rest _:6840ea . _:6840ea rdf:first ; rdf:rest rdf:nil . _:6840fa rdf:first ; rdf:rest _:68410a . _:68410a rdf:first ; rdf:rest rdf:nil . a owl:ObjectProperty; rdfs:subPropertyOf ; owl:propertyChainAxiom _:68411a, _:68413a, _:68415a, _:68417a; "x existence ends during or before y if and only if the time point at which x ends is before or equivalent to the time point at which y ends."; ; rdfs:comment "The relations here were created based on work originally by Fabian Neuhaus and David Osumi-Sutherland. The work has not yet been vetted and errors in definitions may have occurred during transcription."; rdfs:label "existence ends during or before" . _:68411a rdf:first ; rdf:rest _:68412a . _:68412a rdf:first ; rdf:rest rdf:nil . _:68413a rdf:first ; rdf:rest _:68414a . _:68414a rdf:first ; rdf:rest rdf:nil . _:68415a rdf:first ; rdf:rest _:68416a . _:68416a rdf:first ; rdf:rest rdf:nil . _:68417a rdf:first ; rdf:rest _:68418a . _:68418a rdf:first ; rdf:rest rdf:nil . a owl:ObjectProperty; rdfs:subPropertyOf ; owl:inverseOf ; "A relationship between a material entity and a process where the material entity has some causal role that influences the process"; ; rdfs:label "causal agent in process" . a owl:ObjectProperty; rdfs:subPropertyOf ; rdfs:domain ; rdfs:range ; "p is causally related to q if and only if p or any part of p and q or any part of q are linked by a chain of events where each event pair is one where the execution of p influences the execution of q. p may be upstream, downstream, part of, or a container of q."; , "Chris Mungall"; ; "Do not use this relation directly. It is intended as a grouping for a diverse set of relations, all involving cause and effect."; rdfs:label "causal relation between processes" . a owl:ObjectProperty; , "Chris Mungall"; rdfs:label "depends on"; rdfs:seeAlso . a owl:ObjectProperty; rdfs:subPropertyOf ; rdfs:domain ; rdfs:range ; "The intent is that the process branch of the causal property hierarchy is primary (causal relations hold between occurrents/processes), and that the material branch is defined in terms of the process branch"; , "Chris Mungall"; ; "Do not use this relation directly. It is intended as a grouping for a diverse set of relations, all involving cause and effect."; rdfs:label "causal relation between entities" . a owl:ObjectProperty; rdfs:subPropertyOf ; owl:inverseOf ; , "Chris Mungall"; ; "causally influenced by (entity-centric)"; rdfs:label "causally influenced by" . a owl:ObjectProperty; rdfs:subPropertyOf ; , "Chris Mungall"; rdfs:label "interaction relation helper property"; rdfs:seeAlso , "http://purl.obolibrary.org/obo/ro/docs/interaction-relations/"^^xsd:anyURI . a owl:ObjectProperty; rdfs:subPropertyOf ; , "Chris Mungall"; rdfs:label "molecular interaction relation helper property" . a owl:ObjectProperty; rdfs:subPropertyOf ; rdfs:domain ; rdfs:range ; owl:propertyChainAxiom _:68419a, _:6841ca; "The entity or characteristic A is causally upstream of the entity or characteristic B, A having an effect on B. An entity corresponds to any biological type of entity as long as a mass is measurable. A characteristic corresponds to a particular specificity of an entity (e.g., phenotype, shape, size)."; , , "Chris Mungall", "Vasundra Touré"; ; "causally influences (entity-centric)"; rdfs:label "causally influences" . _:68419a rdf:first ; rdf:rest _:6841aa . _:6841aa rdf:first ; rdf:rest _:6841ba . _:6841ba rdf:first ; rdf:rest rdf:nil . _:6841ca rdf:first ; rdf:rest _:6841da . _:6841da rdf:first ; rdf:rest _:6841ea . _:6841ea rdf:first ; rdf:rest rdf:nil . a owl:ObjectProperty; rdfs:subPropertyOf ; rdfs:range ; "x lumen_of y iff x is the space or substance that is part of y and does not cross any of the inner membranes or boundaries of y that is maximal with respect to the volume of the convex hull."; ; "GOC:cjm"; ; rdfs:label "lumen of" . a owl:ObjectProperty; rdfs:subPropertyOf ; rdfs:domain ; "s is luminal space of x iff s is lumen_of x and s is an immaterial entity"; ; ; rdfs:label "luminal space of" . a owl:ObjectProperty; rdfs:subPropertyOf , ; "p directly regulates q iff p is immediately causally upstream of q and p regulates q."; , "Chris Mungall"; ; "directly regulates (processual)"; ; , , ; rdfs:label "directly regulates" . a owl:ObjectProperty; rdfs:subPropertyOf , ; owl:propertyChainAxiom _:6841fa; "gland SubClassOf 'has part structure that is capable of' some 'secretion by cell'"; "s 'has part structure that is capable of' p if and only if there exists some part x such that s 'has part' x and x 'capable of' p"; , "Chris Mungall"; rdfs:label "has part structure that is capable of" . _:6841fa rdf:first ; rdf:rest _:68420a . _:68420a rdf:first ; rdf:rest rdf:nil . a owl:ObjectProperty; rdfs:subPropertyOf ; rdfs:domain ; rdfs:range ; "A relationship that holds between a material entity and a process in which causality is involved, with either the material entity or some part of the material entity exerting some influence over the process, or the process influencing some aspect of the material entity."; "Do not use this relation directly. It is intended as a grouping for a diverse set of relations, all involving cause and effect."; , "Chris Mungall"; ; rdfs:label "causal relation between material entity and a process" . a owl:ObjectProperty; rdfs:subPropertyOf ; owl:propertyChainAxiom _:68421a; "pyrethroid -> growth"; "Holds between c and p if and only if c is capable of some activity a, and a regulates p."; ; rdfs:label "capable of regulating" . _:68421a rdf:first ; rdf:rest _:68422a . _:68422a rdf:first ; rdf:rest rdf:nil . a owl:ObjectProperty; rdfs:subPropertyOf ; owl:propertyChainAxiom _:68423a; "Holds between c and p if and only if c is capable of some activity a, and a negatively regulates p."; ; rdfs:label "capable of negatively regulating" . _:68423a rdf:first ; rdf:rest _:68424a . _:68424a rdf:first ; rdf:rest rdf:nil . a owl:ObjectProperty; rdfs:subPropertyOf ; owl:propertyChainAxiom _:68425a; "renin -> arteriolar smooth muscle contraction"; "Holds between c and p if and only if c is capable of some activity a, and a positively regulates p."; ; rdfs:label "capable of positively regulating" . _:68425a rdf:first ; rdf:rest _:68426a . _:68426a rdf:first ; rdf:rest rdf:nil . a owl:ObjectProperty; rdfs:subPropertyOf ; "Inverse of 'causal agent in process'"; ; rdfs:label "process has causal agent" . a owl:ObjectProperty; rdfs:subPropertyOf , ; "p directly positively regulates q iff p is immediately causally upstream of q, and p positively regulates q."; ; "directly positively regulates (process to process)"; ; , , ; rdfs:label "directly positively regulates" . a owl:ObjectProperty; rdfs:subPropertyOf , ; "p directly negatively regulates q iff p is immediately causally upstream of q, and p negatively regulates q."; ; "directly negatively regulates (process to process)"; ; , , ; rdfs:label "directly negatively regulates" . a owl:ObjectProperty; owl:inverseOf ; rdfs:domain ; rdfs:range ; ; "a produces b if some process that occurs_in a has_output b, where a and b are material entities. Examples: hybridoma cell line produces monoclonal antibody reagent; chondroblast produces avascular GAG-rich matrix."; ; ; rdfs:comment "Note that this definition doesn't quite distinguish the output of a transformation process from a production process, which is related to the identity/granularity issue."; rdfs:label "produces"@en . a owl:ObjectProperty; rdfs:domain ; rdfs:range ; ; "a produced_by b iff some process that occurs_in b has_output a."; ; ; rdfs:label "produced by"@en . a owl:ObjectProperty; rdfs:subPropertyOf ; owl:propertyChainAxiom _:68427a; "Holds between an entity and an process P where the entity enables some larger compound process, and that larger process has-part P."; , "cjm"; "2018-01-25T23:20:13Z"^^xsd:dateTime; rdfs:label "enables subfunction" . _:68427a rdf:first ; rdf:rest _:68428a . _:68428a rdf:first ; rdf:rest rdf:nil . a owl:ObjectProperty; rdfs:subPropertyOf ; owl:propertyChainAxiom _:68429a; ; , "cjm"; "2018-01-26T23:49:30Z"^^xsd:dateTime; ; rdfs:label "acts upstream of or within, positive effect"; rdfs:seeAlso . _:68429a rdf:first ; rdf:rest _:6842aa . _:6842aa rdf:first ; rdf:rest rdf:nil . a owl:ObjectProperty; rdfs:subPropertyOf ; owl:propertyChainAxiom _:6842ba; ; , "cjm"; "2018-01-26T23:49:51Z"^^xsd:dateTime; ; rdfs:label "acts upstream of or within, negative effect" . _:6842ba rdf:first ; rdf:rest _:6842ca . _:6842ca rdf:first ; rdf:rest rdf:nil . a owl:ObjectProperty; rdfs:subPropertyOf , ; owl:propertyChainAxiom _:6842da; "c 'acts upstream of, positive effect' p if c is enables f, and f is causally upstream of p, and the direction of f is positive"; ; , "cjm"; "2018-01-26T23:53:14Z"^^xsd:dateTime; ; rdfs:label "acts upstream of, positive effect"; rdfs:seeAlso . _:6842da rdf:first ; rdf:rest _:6842ea . _:6842ea rdf:first ; rdf:rest rdf:nil . a owl:ObjectProperty; rdfs:subPropertyOf , ; owl:propertyChainAxiom _:6842fa; "c 'acts upstream of, negative effect' p if c is enables f, and f is causally upstream of p, and the direction of f is negative"; ; , "cjm"; "2018-01-26T23:53:22Z"^^xsd:dateTime; ; rdfs:label "acts upstream of, negative effect"; rdfs:seeAlso . _:6842fa rdf:first ; rdf:rest _:68430a . _:68430a rdf:first ; rdf:rest rdf:nil . a owl:ObjectProperty; rdfs:subPropertyOf ; ; , "cjm"; "2018-03-13T23:55:05Z"^^xsd:dateTime; rdfs:label "causally upstream of or within, negative effect" . a owl:ObjectProperty; rdfs:subPropertyOf ; ; , "cjm"; "2018-03-13T23:55:19Z"^^xsd:dateTime; rdfs:label "causally upstream of or within, positive effect" . a owl:ObjectProperty; rdfs:subPropertyOf ; rdfs:domain ; rdfs:range ; "The entity A has an activity that regulates an activity of the entity B. For example, A and B are gene products where the catalytic activity of A regulates the kinase activity of B."; , "Vasundra Touré"; rdfs:label "regulates activity of" . a owl:ObjectProperty; rdfs:subPropertyOf ; "p is indirectly causally upstream of q iff p is causally upstream of q and there exists some process r such that p is causally upstream of r and r is causally upstream of q."; "pg"; "2022-09-26T06:07:17Z"^^xsd:dateTime; rdfs:label "indirectly causally upstream of"@en . a owl:ObjectProperty; rdfs:subPropertyOf , ; "p indirectly regulates q iff p is indirectly causally upstream of q and p regulates q."; "pg"; "2022-09-26T06:08:01Z"^^xsd:dateTime; rdfs:label "indirectly regulates"@en . a owl:ObjectProperty; owl:propertyChainAxiom _:68431a; "A diagnostic testing device utilizes a specimen."; "X device utilizes material Y means X and Y are material entities, and X is capable of some process P that has input Y."; , , "https://orcid.org/0000-0001-9625-1899", "https://orcid.org/0000-0003-2620-0345"; "A diagnostic testing device utilizes a specimen means that the diagnostic testing device is capable of an assay, and this assay a specimen as its input.", "See github ticket https://github.com/oborel/obo-relations/issues/497"; "2021-11-08T12:00:00Z"; "utilizes"; rdfs:label "device utilizes material"@en . _:68431a rdf:first ; rdf:rest _:68432a . _:68432a rdf:first ; rdf:rest rdf:nil . a owl:ObjectProperty; rdfs:subPropertyOf ; rdfs:domain ; rdfs:range ; owl:propertyChainAxiom _:68433a; "A relationship that holds between a process and a characteristic in which process (P) regulates characteristic (C) iff: P results in the existence of C OR affects the intensity or magnitude of C."; ; rdfs:label "regulates characteristic" . _:68433a rdf:first ; rdf:rest _:68434a . _:68434a rdf:first ; rdf:rest rdf:nil . a owl:ObjectProperty; rdfs:subPropertyOf ; owl:propertyChainAxiom _:68435a; "A relationship that holds between a process and a characteristic in which process (P) positively regulates characteristic (C) iff: P results in an increase in the intensity or magnitude of C."; ; rdfs:label "positively regulates characteristic" . _:68435a rdf:first ; rdf:rest _:68436a . _:68436a rdf:first ; rdf:rest rdf:nil . a owl:ObjectProperty; rdfs:subPropertyOf ; owl:propertyChainAxiom _:68437a, _:68439a; "A relationship that holds between a process and a characteristic in which process (P) negatively regulates characteristic (C) iff: P results in a decrease in the intensity or magnitude of C."; ; rdfs:label "negatively regulates characteristic" . _:68437a rdf:first ; rdf:rest _:68438a . _:68438a rdf:first ; rdf:rest rdf:nil . _:68439a rdf:first ; rdf:rest _:6843aa . _:6843aa rdf:first ; rdf:rest rdf:nil . a owl:ObjectProperty . a owl:Class; "entity"; "Entity"; "Julius Caesar"@en, "Verdi’s Requiem"@en, "the Second World War"@en, "your body mass index"@en; "BFO 2 Reference: In all areas of empirical inquiry we encounter general terms of two sorts. First are general terms which refer to universals or types:animaltuberculosissurgical procedurediseaseSecond, are general terms used to refer to groups of entities which instantiate a given universal but do not correspond to the extension of any subuniversal of that universal because there is nothing intrinsic to the entities in question by virtue of which they – and only they – are counted as belonging to the given group. Examples are: animal purchased by the Emperortuberculosis diagnosed on a Wednesdaysurgical procedure performed on a patient from Stockholmperson identified as candidate for clinical trial #2056-555person who is signatory of Form 656-PPVpainting by Leonardo da VinciSuch terms, which represent what are called ‘specializations’ in [81"@en, "Entity doesn't have a closure axiom because the subclasses don't necessarily exhaust all possibilites. For example Werner Ceusters 'portions of reality' include 4 sorts, entities (as BFO construes them), universals, configurations, and relations. It is an open question as to whether entities as construed in BFO will at some point also include these other portions of reality. See, for example, 'How to track absolutely everything' at http://www.referent-tracking.com/_RTU/papers/CeustersICbookRevised.pdf"@en; "An entity is anything that exists or has existed or will exist. (axiom label in BFO2 Reference: [001-001])"@en; rdfs:isDefinedBy ; rdfs:label "entity"@en . _:6843ba a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Entity doesn't have a closure axiom because the subclasses don't necessarily exhaust all possibilites. For example Werner Ceusters 'portions of reality' include 4 sorts, entities (as BFO construes them), universals, configurations, and relations. It is an open question as to whether entities as construed in BFO will at some point also include these other portions of reality. See, for example, 'How to track absolutely everything' at http://www.referent-tracking.com/_RTU/papers/CeustersICbookRevised.pdf"@en; ; rdfs:comment "per discussion with Barry Smith"; rdfs:seeAlso . _:6843ca a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "An entity is anything that exists or has existed or will exist. (axiom label in BFO2 Reference: [001-001])"@en; . a owl:Class; rdfs:subClassOf , _:6843da; owl:disjointWith , _:6843ea; "continuant"; "Continuant"; "An entity that exists in full at any time in which it exists at all, persists through time while maintaining its identity and has no temporal parts."@en; "BFO 2 Reference: Continuant entities are entities which can be sliced to yield parts only along the spatial dimension, yielding for example the parts of your table which we call its legs, its top, its nails. ‘My desk stretches from the window to the door. It has spatial parts, and can be sliced (in space) in two. With respect to time, however, a thing is a continuant.’ [60, p. 240"@en, "Continuant doesn't have a closure axiom because the subclasses don't necessarily exhaust all possibilites. For example, in an expansion involving bringing in some of Ceuster's other portions of reality, questions are raised as to whether universals are continuants"@en; "A continuant is an entity that persists, endures, or continues to exist through time while maintaining its identity. (axiom label in BFO2 Reference: [008-002])"@en; "if b is a continuant and if, for some t, c has_continuant_part b at t, then c is a continuant. (axiom label in BFO2 Reference: [126-001])"@en, "if b is a continuant and if, for some t, cis continuant_part of b at t, then c is a continuant. (axiom label in BFO2 Reference: [009-002])"@en, "if b is a material entity, then there is some temporal interval (referred to below as a one-dimensional temporal region) during which b exists. (axiom label in BFO2 Reference: [011-002])"@en; "(forall (x y) (if (and (Continuant x) (exists (t) (continuantPartOfAt y x t))) (Continuant y))) // axiom label in BFO2 CLIF: [009-002] ", "(forall (x y) (if (and (Continuant x) (exists (t) (hasContinuantPartOfAt y x t))) (Continuant y))) // axiom label in BFO2 CLIF: [126-001] ", "(forall (x) (if (Continuant x) (Entity x))) // axiom label in BFO2 CLIF: [008-002] ", "(forall (x) (if (Material Entity x) (exists (t) (and (TemporalRegion t) (existsAt x t))))) // axiom label in BFO2 CLIF: [011-002] "; rdfs:isDefinedBy ; rdfs:label "continuant"@en . _:6843da a owl:Restriction; owl:onProperty ; owl:allValuesFrom . _:6843ea a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6843fa a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Continuant doesn't have a closure axiom because the subclasses don't necessarily exhaust all possibilites. For example, in an expansion involving bringing in some of Ceuster's other portions of reality, questions are raised as to whether universals are continuants"@en; . _:68440a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "A continuant is an entity that persists, endures, or continues to exist through time while maintaining its identity. (axiom label in BFO2 Reference: [008-002])"@en; . _:68441a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "if b is a continuant and if, for some t, c has_continuant_part b at t, then c is a continuant. (axiom label in BFO2 Reference: [126-001])"@en; . _:68442a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "if b is a continuant and if, for some t, cis continuant_part of b at t, then c is a continuant. (axiom label in BFO2 Reference: [009-002])"@en; . _:68443a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "if b is a material entity, then there is some temporal interval (referred to below as a one-dimensional temporal region) during which b exists. (axiom label in BFO2 Reference: [011-002])"@en; . _:68444a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "(forall (x y) (if (and (Continuant x) (exists (t) (continuantPartOfAt y x t))) (Continuant y))) // axiom label in BFO2 CLIF: [009-002] "; . _:68445a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "(forall (x y) (if (and (Continuant x) (exists (t) (hasContinuantPartOfAt y x t))) (Continuant y))) // axiom label in BFO2 CLIF: [126-001] "; . _:68446a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "(forall (x) (if (Continuant x) (Entity x))) // axiom label in BFO2 CLIF: [008-002] "; . _:68447a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "(forall (x) (if (Material Entity x) (exists (t) (and (TemporalRegion t) (existsAt x t))))) // axiom label in BFO2 CLIF: [011-002] "; . a owl:Class; rdfs:subClassOf , _:68448a; owl:disjointWith _:68449a; "occurrent"; "Occurrent"; "An entity that has temporal parts and that happens, unfolds or develops through time."@en; "BFO 2 Reference: every occurrent that is not a temporal or spatiotemporal region is s-dependent on some independent continuant that is not a spatial region"@en, "BFO 2 Reference: s-dependence obtains between every process and its participants in the sense that, as a matter of necessity, this process could not have existed unless these or those participants existed also. A process may have a succession of participants at different phases of its unfolding. Thus there may be different players on the field at different times during the course of a football game; but the process which is the entire game s-depends_on all of these players nonetheless. Some temporal parts of this process will s-depend_on on only some of the players."@en, "Occurrent doesn't have a closure axiom because the subclasses don't necessarily exhaust all possibilites. An example would be the sum of a process and the process boundary of another process."@en, "Simons uses different terminology for relations of occurrents to regions: Denote the spatio-temporal location of a given occurrent e by 'spn[e]' and call this region its span. We may say an occurrent is at its span, in any larger region, and covers any smaller region. Now suppose we have fixed a frame of reference so that we can speak not merely of spatio-temporal but also of spatial regions (places) and temporal regions (times). The spread of an occurrent, (relative to a frame of reference) is the space it exactly occupies, and its spell is likewise the time it exactly occupies. We write 'spr[e]' and `spl[e]' respectively for the spread and spell of e, omitting mention of the frame."; "An occurrent is an entity that unfolds itself in time or it is the instantaneous boundary of such an entity (for example a beginning or an ending) or it is a temporal or spatiotemporal region which such an entity occupies_temporal_region or occupies_spatiotemporal_region. (axiom label in BFO2 Reference: [077-002])"@en; "Every occurrent occupies_spatiotemporal_region some spatiotemporal region. (axiom label in BFO2 Reference: [108-001])"@en, "b is an occurrent entity iff b is an entity that has temporal parts. (axiom label in BFO2 Reference: [079-001])"@en; "(forall (x) (if (Occurrent x) (exists (r) (and (SpatioTemporalRegion r) (occupiesSpatioTemporalRegion x r))))) // axiom label in BFO2 CLIF: [108-001] ", "(forall (x) (iff (Occurrent x) (and (Entity x) (exists (y) (temporalPartOf y x))))) // axiom label in BFO2 CLIF: [079-001] "; rdfs:isDefinedBy ; rdfs:label "occurrent"@en . _:68448a a owl:Restriction; owl:onProperty ; owl:allValuesFrom . _:68449a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6844aa a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Occurrent doesn't have a closure axiom because the subclasses don't necessarily exhaust all possibilites. An example would be the sum of a process and the process boundary of another process."@en; ; rdfs:comment "per discussion with Barry Smith" . _:6844ba a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Simons uses different terminology for relations of occurrents to regions: Denote the spatio-temporal location of a given occurrent e by 'spn[e]' and call this region its span. We may say an occurrent is at its span, in any larger region, and covers any smaller region. Now suppose we have fixed a frame of reference so that we can speak not merely of spatio-temporal but also of spatial regions (places) and temporal regions (times). The spread of an occurrent, (relative to a frame of reference) is the space it exactly occupies, and its spell is likewise the time it exactly occupies. We write 'spr[e]' and `spl[e]' respectively for the spread and spell of e, omitting mention of the frame."; . _:6844ca a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "An occurrent is an entity that unfolds itself in time or it is the instantaneous boundary of such an entity (for example a beginning or an ending) or it is a temporal or spatiotemporal region which such an entity occupies_temporal_region or occupies_spatiotemporal_region. (axiom label in BFO2 Reference: [077-002])"@en; . _:6844da a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Every occurrent occupies_spatiotemporal_region some spatiotemporal region. (axiom label in BFO2 Reference: [108-001])"@en; . _:6844ea a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "b is an occurrent entity iff b is an entity that has temporal parts. (axiom label in BFO2 Reference: [079-001])"@en; . _:6844fa a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "(forall (x) (if (Occurrent x) (exists (r) (and (SpatioTemporalRegion r) (occupiesSpatioTemporalRegion x r))))) // axiom label in BFO2 CLIF: [108-001] "; . _:68450a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "(forall (x) (iff (Occurrent x) (and (Entity x) (exists (y) (temporalPartOf y x))))) // axiom label in BFO2 CLIF: [079-001] "; . a owl:Class; rdfs:subClassOf , _:68451a; owl:disjointWith , ; "ic"; "IndependentContinuant"; "a chair"@en, "a heart"@en, "a leg"@en, "a molecule"@en, "a spatial region"@en, "an atom"@en, "an orchestra."@en, "an organism"@en, "the bottom right portion of a human torso"@en, "the interior of your mouth"@en; "A continuant that is a bearer of quality and realizable entity entities, in which other entities inhere and which itself cannot inhere in anything."@en, "b is an independent continuant = Def. b is a continuant which is such that there is no c and no t such that b s-depends_on c at t. (axiom label in BFO2 Reference: [017-002])"@en; "For any independent continuant b and any time t there is some spatial region r such that b is located_in r at t. (axiom label in BFO2 Reference: [134-001])"@en, "For every independent continuant b and time t during the region of time spanned by its life, there are entities which s-depends_on b during t. (axiom label in BFO2 Reference: [018-002])"@en; "(forall (x t) (if (IndependentContinuant x) (exists (r) (and (SpatialRegion r) (locatedInAt x r t))))) // axiom label in BFO2 CLIF: [134-001] ", "(forall (x t) (if (and (IndependentContinuant x) (existsAt x t)) (exists (y) (and (Entity y) (specificallyDependsOnAt y x t))))) // axiom label in BFO2 CLIF: [018-002] ", "(iff (IndependentContinuant a) (and (Continuant a) (not (exists (b t) (specificallyDependsOnAt a b t))))) // axiom label in BFO2 CLIF: [017-002] "; rdfs:isDefinedBy ; rdfs:label "independent continuant"@en . _:68451a a owl:Restriction; owl:onProperty ; owl:allValuesFrom . _:68452a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "b is an independent continuant = Def. b is a continuant which is such that there is no c and no t such that b s-depends_on c at t. (axiom label in BFO2 Reference: [017-002])"@en; . _:68453a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "For any independent continuant b and any time t there is some spatial region r such that b is located_in r at t. (axiom label in BFO2 Reference: [134-001])"@en; . _:68454a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "For every independent continuant b and time t during the region of time spanned by its life, there are entities which s-depends_on b during t. (axiom label in BFO2 Reference: [018-002])"@en; . _:68455a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "(forall (x t) (if (IndependentContinuant x) (exists (r) (and (SpatialRegion r) (locatedInAt x r t))))) // axiom label in BFO2 CLIF: [134-001] "; . _:68456a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "(forall (x t) (if (and (IndependentContinuant x) (existsAt x t)) (exists (y) (and (Entity y) (specificallyDependsOnAt y x t))))) // axiom label in BFO2 CLIF: [018-002] "; . _:68457a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "(iff (IndependentContinuant a) (and (Continuant a) (not (exists (b t) (specificallyDependsOnAt a b t))))) // axiom label in BFO2 CLIF: [017-002] "; . a owl:Class; rdfs:subClassOf ; "process"; "Process"; "a process of cell-division, \\ a beating of the heart"@en, "a process of meiosis"@en, "a process of sleeping"@en, "the course of a disease"@en, "the flight of a bird"@en, "the life of an organism"@en, "your process of aging."@en; "An occurrent that has temporal proper parts and for some time t, p s-depends_on some material entity at t."@en, "p is a process = Def. p is an occurrent that has temporal proper parts and for some time t, p s-depends_on some material entity at t. (axiom label in BFO2 Reference: [083-003])"@en; "BFO 2 Reference: The realm of occurrents is less pervasively marked by the presence of natural units than is the case in the realm of independent continuants. Thus there is here no counterpart of ‘object’. In BFO 1.0 ‘process’ served as such a counterpart. In BFO 2.0 ‘process’ is, rather, the occurrent counterpart of ‘material entity’. Those natural – as contrasted with engineered, which here means: deliberately executed – units which do exist in the realm of occurrents are typically either parasitic on the existence of natural units on the continuant side, or they are fiat in nature. Thus we can count lives; we can count football games; we can count chemical reactions performed in experiments or in chemical manufacturing. We cannot count the processes taking place, for instance, in an episode of insect mating behavior.Even where natural units are identifiable, for example cycles in a cyclical process such as the beating of a heart or an organism’s sleep/wake cycle, the processes in question form a sequence with no discontinuities (temporal gaps) of the sort that we find for instance where billiard balls or zebrafish or planets are separated by clear spatial gaps. Lives of organisms are process units, but they too unfold in a continuous series from other, prior processes such as fertilization, and they unfold in turn in continuous series of post-life processes such as post-mortem decay. Clear examples of boundaries of processes are almost always of the fiat sort (midnight, a time of death as declared in an operating theater or on a death certificate, the initiation of a state of war)"@en; "(iff (Process a) (and (Occurrent a) (exists (b) (properTemporalPartOf b a)) (exists (c t) (and (MaterialEntity c) (specificallyDependsOnAt a c t))))) // axiom label in BFO2 CLIF: [083-003] "; rdfs:isDefinedBy ; rdfs:label "process"@en . _:68458a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "p is a process = Def. p is an occurrent that has temporal proper parts and for some time t, p s-depends_on some material entity at t. (axiom label in BFO2 Reference: [083-003])"@en; . _:68459a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "(iff (Process a) (and (Occurrent a) (exists (b) (properTemporalPartOf b a)) (exists (c t) (and (MaterialEntity c) (specificallyDependsOnAt a c t))))) // axiom label in BFO2 CLIF: [083-003] "; . a owl:Class; rdfs:subClassOf ; owl:disjointWith ; "disposition"; "Disposition"; "an atom of element X has the disposition to decay to an atom of element Y"@en, "certain people have a predisposition to colon cancer"@en, "children are innately disposed to categorize objects in certain ways."@en, "the cell wall is disposed to filter chemicals in endocytosis and exocytosis"@en; "BFO 2 Reference: Dispositions exist along a strength continuum. Weaker forms of disposition are realized in only a fraction of triggering cases. These forms occur in a significant number of cases of a similar type."@en; "b is a disposition means: b is a realizable entity & b’s bearer is some material entity & b is such that if it ceases to exist, then its bearer is physically changed, & b’s realization occurs when and because this bearer is in some special physical circumstances, & this realization occurs in virtue of the bearer’s physical make-up. (axiom label in BFO2 Reference: [062-002])"@en; "If b is a realizable entity then for all t at which b exists, b s-depends_on some material entity at t. (axiom label in BFO2 Reference: [063-002])"@en; "(forall (x t) (if (and (RealizableEntity x) (existsAt x t)) (exists (y) (and (MaterialEntity y) (specificallyDepends x y t))))) // axiom label in BFO2 CLIF: [063-002] ", "(forall (x) (if (Disposition x) (and (RealizableEntity x) (exists (y) (and (MaterialEntity y) (bearerOfAt x y t)))))) // axiom label in BFO2 CLIF: [062-002] "; rdfs:isDefinedBy ; rdfs:label "disposition"@en . _:6845aa a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "b is a disposition means: b is a realizable entity & b’s bearer is some material entity & b is such that if it ceases to exist, then its bearer is physically changed, & b’s realization occurs when and because this bearer is in some special physical circumstances, & this realization occurs in virtue of the bearer’s physical make-up. (axiom label in BFO2 Reference: [062-002])"@en; . _:6845ba a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "If b is a realizable entity then for all t at which b exists, b s-depends_on some material entity at t. (axiom label in BFO2 Reference: [063-002])"@en; . _:6845ca a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "(forall (x t) (if (and (RealizableEntity x) (existsAt x t)) (exists (y) (and (MaterialEntity y) (specificallyDepends x y t))))) // axiom label in BFO2 CLIF: [063-002] "; . _:6845da a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "(forall (x) (if (Disposition x) (and (RealizableEntity x) (exists (y) (and (MaterialEntity y) (bearerOfAt x y t)))))) // axiom label in BFO2 CLIF: [062-002] "; . a owl:Class; rdfs:subClassOf , _:6845ea; owl:disjointWith ; "realizable"; "RealizableEntity"; "the disposition of this piece of metal to conduct electricity."@en, "the disposition of your blood to coagulate"@en, "the function of your reproductive organs"@en, "the role of being a doctor"@en, "the role of this boundary to delineate where Utah and Colorado meet"@en; "A specifically dependent continuant that inheres in continuant entities and are not exhibited in full at every time in which it inheres in an entity or group of entities. The exhibition or actualization of a realizable entity is a particular manifestation, functioning or process that occurs under certain circumstances."@en; "To say that b is a realizable entity is to say that b is a specifically dependent continuant that inheres in some independent continuant which is not a spatial region and is of a type instances of which are realized in processes of a correlated type. (axiom label in BFO2 Reference: [058-002])"@en; "All realizable dependent continuants have independent continuants that are not spatial regions as their bearers. (axiom label in BFO2 Reference: [060-002])"@en; "(forall (x t) (if (RealizableEntity x) (exists (y) (and (IndependentContinuant y) (not (SpatialRegion y)) (bearerOfAt y x t))))) // axiom label in BFO2 CLIF: [060-002] ", "(forall (x) (if (RealizableEntity x) (and (SpecificallyDependentContinuant x) (exists (y) (and (IndependentContinuant y) (not (SpatialRegion y)) (inheresIn x y)))))) // axiom label in BFO2 CLIF: [058-002] "; rdfs:isDefinedBy ; rdfs:label "realizable entity"@en . _:6845ea a owl:Restriction; owl:onProperty ; owl:allValuesFrom . _:6845fa a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "To say that b is a realizable entity is to say that b is a specifically dependent continuant that inheres in some independent continuant which is not a spatial region and is of a type instances of which are realized in processes of a correlated type. (axiom label in BFO2 Reference: [058-002])"@en; . _:68460a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "All realizable dependent continuants have independent continuants that are not spatial regions as their bearers. (axiom label in BFO2 Reference: [060-002])"@en; . _:68461a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "(forall (x t) (if (RealizableEntity x) (exists (y) (and (IndependentContinuant y) (not (SpatialRegion y)) (bearerOfAt y x t))))) // axiom label in BFO2 CLIF: [060-002] "; . _:68462a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "(forall (x) (if (RealizableEntity x) (and (SpecificallyDependentContinuant x) (exists (y) (and (IndependentContinuant y) (not (SpatialRegion y)) (inheresIn x y)))))) // axiom label in BFO2 CLIF: [058-002] "; . a owl:Class; rdfs:subClassOf , _:68463a; "quality"; "Quality"; "the ambient temperature of this portion of air"@en, "the color of a tomato"@en, "the length of the circumference of your waist"@en, "the mass of this piece of gold."@en, "the shape of your nose"@en, "the shape of your nostril"@en; "a quality is a specifically dependent continuant that, in contrast to roles and dispositions, does not require any further process in order to be realized. (axiom label in BFO2 Reference: [055-001])"@en; "If an entity is a quality at any time that it exists, then it is a quality at every time that it exists. (axiom label in BFO2 Reference: [105-001])"@en; "(forall (x) (if (Quality x) (SpecificallyDependentContinuant x))) // axiom label in BFO2 CLIF: [055-001] ", "(forall (x) (if (exists (t) (and (existsAt x t) (Quality x))) (forall (t_1) (if (existsAt x t_1) (Quality x))))) // axiom label in BFO2 CLIF: [105-001] "; rdfs:isDefinedBy ; rdfs:label "quality"@en . _:68463a a owl:Restriction; owl:onProperty ; owl:allValuesFrom . _:68464a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "a quality is a specifically dependent continuant that, in contrast to roles and dispositions, does not require any further process in order to be realized. (axiom label in BFO2 Reference: [055-001])"@en; . _:68465a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "If an entity is a quality at any time that it exists, then it is a quality at every time that it exists. (axiom label in BFO2 Reference: [105-001])"@en; . _:68466a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "(forall (x) (if (Quality x) (SpecificallyDependentContinuant x))) // axiom label in BFO2 CLIF: [055-001] "; . _:68467a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "(forall (x) (if (exists (t) (and (existsAt x t) (Quality x))) (forall (t_1) (if (existsAt x t_1) (Quality x))))) // axiom label in BFO2 CLIF: [105-001] "; . a owl:Class; rdfs:subClassOf , _:68468a; owl:disjointWith ; "sdc"; "SpecificallyDependentContinuant"; "Reciprocal specifically dependent continuants: the function of this key to open this lock and the mutually dependent disposition of this lock: to be opened by this key"@en, "of one-sided specifically dependent continuants: the mass of this tomato"@en, "of relational dependent continuants (multiple bearers): John’s love for Mary, the ownership relation between John and this statue, the relation of authority between John and his subordinates."@en, "the disposition of this fish to decay"@en, "the function of this heart: to pump blood"@en, "the mutual dependence of proton donors and acceptors in chemical reactions [79"@en, "the mutual dependence of the role predator and the role prey as played by two organisms in a given interaction"@en, "the pink color of a medium rare piece of grilled filet mignon at its center"@en, "the role of being a doctor"@en, "the shape of this hole."@en, "the smell of this portion of mozzarella"@en; "A continuant that inheres in or is borne by other entities. Every instance of A requires some specific instance of B which must always be the same."@en, "b is a specifically dependent continuant = Def. b is a continuant & there is some independent continuant c which is not a spatial region and which is such that b s-depends_on c at every time t during the course of b’s existence. (axiom label in BFO2 Reference: [050-003])"@en; "Specifically dependent continuant doesn't have a closure axiom because the subclasses don't necessarily exhaust all possibilites. We're not sure what else will develop here, but for example there are questions such as what are promises, obligation, etc."@en; "(iff (SpecificallyDependentContinuant a) (and (Continuant a) (forall (t) (if (existsAt a t) (exists (b) (and (IndependentContinuant b) (not (SpatialRegion b)) (specificallyDependsOnAt a b t))))))) // axiom label in BFO2 CLIF: [050-003] "; rdfs:isDefinedBy ; rdfs:label "specifically dependent continuant"@en . _:68468a a owl:Restriction; owl:onProperty ; owl:allValuesFrom . _:68469a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "b is a specifically dependent continuant = Def. b is a continuant & there is some independent continuant c which is not a spatial region and which is such that b s-depends_on c at every time t during the course of b’s existence. (axiom label in BFO2 Reference: [050-003])"@en; . _:6846aa a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Specifically dependent continuant doesn't have a closure axiom because the subclasses don't necessarily exhaust all possibilites. We're not sure what else will develop here, but for example there are questions such as what are promises, obligation, etc."@en; ; rdfs:comment "per discussion with Barry Smith" . _:6846ba a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "(iff (SpecificallyDependentContinuant a) (and (Continuant a) (forall (t) (if (existsAt a t) (exists (b) (and (IndependentContinuant b) (not (SpatialRegion b)) (specificallyDependsOnAt a b t))))))) // axiom label in BFO2 CLIF: [050-003] "; . a owl:Class; rdfs:subClassOf ; "role"; "Role"; "John’s role of husband to Mary is dependent on Mary’s role of wife to John, and both are dependent on the object aggregate comprising John and Mary as member parts joined together through the relational quality of being married."@en, "the priest role"@en, "the role of a boundary to demarcate two neighboring administrative territories"@en, "the role of a building in serving as a military target"@en, "the role of a stone in marking a property boundary"@en, "the role of subject in a clinical trial"@en, "the student role"@en; "A realizable entity the manifestation of which brings about some result or end that is not essential to a continuant in virtue of the kind of thing that it is but that can be served or participated in by that kind of continuant in some kinds of natural, social or institutional contexts."@en; "BFO 2 Reference: One major family of examples of non-rigid universals involves roles, and ontologies developed for corresponding administrative purposes may consist entirely of representatives of entities of this sort. Thus ‘professor’, defined as follows,b instance_of professor at t =Def. there is some c, c instance_of professor role & c inheres_in b at t.denotes a non-rigid universal and so also do ‘nurse’, ‘student’, ‘colonel’, ‘taxpayer’, and so forth. (These terms are all, in the jargon of philosophy, phase sortals.) By using role terms in definitions, we can create a BFO conformant treatment of such entities drawing on the fact that, while an instance of professor may be simultaneously an instance of trade union member, no instance of the type professor role is also (at any time) an instance of the type trade union member role (any more than any instance of the type color is at any time an instance of the type length).If an ontology of employment positions should be defined in terms of roles following the above pattern, this enables the ontology to do justice to the fact that individuals instantiate the corresponding universals – professor, sergeant, nurse – only during certain phases in their lives."@en; "b is a role means: b is a realizable entity & b exists because there is some single bearer that is in some special physical, social, or institutional set of circumstances in which this bearer does not have to be& b is not such that, if it ceases to exist, then the physical make-up of the bearer is thereby changed. (axiom label in BFO2 Reference: [061-001])"@en; "(forall (x) (if (Role x) (RealizableEntity x))) // axiom label in BFO2 CLIF: [061-001] "; rdfs:isDefinedBy ; rdfs:label "role"@en . _:6846ca a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "b is a role means: b is a realizable entity & b exists because there is some single bearer that is in some special physical, social, or institutional set of circumstances in which this bearer does not have to be& b is not such that, if it ceases to exist, then the physical make-up of the bearer is thereby changed. (axiom label in BFO2 Reference: [061-001])"@en; . _:6846da a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "(forall (x) (if (Role x) (RealizableEntity x))) // axiom label in BFO2 CLIF: [061-001] "; . a owl:Class; rdfs:subClassOf ; "gdc"; "GenericallyDependentContinuant"; "The entries in your database are patterns instantiated as quality instances in your hard drive. The database itself is an aggregate of such patterns. When you create the database you create a particular instance of the generically dependent continuant type database. Each entry in the database is an instance of the generically dependent continuant type IAO: information content entity."@en, "the pdf file on your laptop, the pdf file that is a copy thereof on my laptop"@en, "the sequence of this protein molecule; the sequence that is a copy thereof in that protein molecule."@en; "b is a generically dependent continuant = Def. b is a continuant that g-depends_on one or more other entities. (axiom label in BFO2 Reference: [074-001])"@en; "(iff (GenericallyDependentContinuant a) (and (Continuant a) (exists (b t) (genericallyDependsOnAt a b t)))) // axiom label in BFO2 CLIF: [074-001] "; rdfs:isDefinedBy ; rdfs:label "generically dependent continuant"@en . _:6846ea a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "b is a generically dependent continuant = Def. b is a continuant that g-depends_on one or more other entities. (axiom label in BFO2 Reference: [074-001])"@en; . _:6846fa a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "(iff (GenericallyDependentContinuant a) (and (Continuant a) (exists (b t) (genericallyDependsOnAt a b t)))) // axiom label in BFO2 CLIF: [074-001] "; . a owl:Class; rdfs:subClassOf ; "function"; "Function"; "the function of a hammer to drive in nails"@en, "the function of a heart pacemaker to regulate the beating of a heart through electricity"@en, "the function of amylase in saliva to break down starch into sugar"@en; "BFO 2 Reference: In the past, we have distinguished two varieties of function, artifactual function and biological function. These are not asserted subtypes of BFO:function however, since the same function – for example: to pump, to transport – can exist both in artifacts and in biological entities. The asserted subtypes of function that would be needed in order to yield a separate monoheirarchy are not artifactual function, biological function, etc., but rather transporting function, pumping function, etc."@en; "A function is a disposition that exists in virtue of the bearer’s physical make-up and this physical make-up is something the bearer possesses because it came into being, either through evolution (in the case of natural biological entities) or through intentional design (in the case of artifacts), in order to realize processes of a certain sort. (axiom label in BFO2 Reference: [064-001])"@en; "(forall (x) (if (Function x) (Disposition x))) // axiom label in BFO2 CLIF: [064-001] "; rdfs:isDefinedBy ; rdfs:label "function"@en . _:68470a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "A function is a disposition that exists in virtue of the bearer’s physical make-up and this physical make-up is something the bearer possesses because it came into being, either through evolution (in the case of natural biological entities) or through intentional design (in the case of artifacts), in order to realize processes of a certain sort. (axiom label in BFO2 Reference: [064-001])"@en; . _:68471a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "(forall (x) (if (Function x) (Disposition x))) // axiom label in BFO2 CLIF: [064-001] "; . a owl:Class; rdfs:subClassOf ; owl:disjointWith , _:68472a; "material"; "MaterialEntity"; "a flame"@en, "a forest fire"@en, "a human being"@en, "a hurricane"@en, "a photon"@en, "a puff of smoke"@en, "a sea wave"@en, "a tornado"@en, "an aggregate of human beings."@en, "an energy wave"@en, "an epidemic"@en, "the undetached arm of a human being"@en; "An independent continuant that is spatially extended whose identity is independent of that of other entities and can be maintained through time."@en; "BFO 2 Reference: Material entities (continuants) can preserve their identity even while gaining and losing material parts. Continuants are contrasted with occurrents, which unfold themselves in successive temporal parts or phases [60"@en, "BFO 2 Reference: Object, Fiat Object Part and Object Aggregate are not intended to be exhaustive of Material Entity. Users are invited to propose new subcategories of Material Entity."@en, "BFO 2 Reference: ‘Matter’ is intended to encompass both mass and energy (we will address the ontological treatment of portions of energy in a later version of BFO). A portion of matter is anything that includes elementary particles among its proper or improper parts: quarks and leptons, including electrons, as the smallest particles thus far discovered; baryons (including protons and neutrons) at a higher level of granularity; atoms and molecules at still higher levels, forming the cells, organs, organisms and other material entities studied by biologists, the portions of rock studied by geologists, the fossils studied by paleontologists, and so on.Material entities are three-dimensional entities (entities extended in three spatial dimensions), as contrasted with the processes in which they participate, which are four-dimensional entities (entities extended also along the dimension of time).According to the FMA, material entities may have immaterial entities as parts – including the entities identified below as sites; for example the interior (or ‘lumen’) of your small intestine is a part of your body. BFO 2.0 embodies a decision to follow the FMA here."@en; "A material entity is an independent continuant that has some portion of matter as proper or improper continuant part. (axiom label in BFO2 Reference: [019-002])"@en; "Every entity which has a material entity as continuant part is a material entity. (axiom label in BFO2 Reference: [020-002])"@en, "every entity of which a material entity is continuant part is also a material entity. (axiom label in BFO2 Reference: [021-002])"@en; "(forall (x) (if (MaterialEntity x) (IndependentContinuant x))) // axiom label in BFO2 CLIF: [019-002] ", "(forall (x) (if (and (Entity x) (exists (y t) (and (MaterialEntity y) (continuantPartOfAt x y t)))) (MaterialEntity x))) // axiom label in BFO2 CLIF: [021-002] ", "(forall (x) (if (and (Entity x) (exists (y t) (and (MaterialEntity y) (continuantPartOfAt y x t)))) (MaterialEntity x))) // axiom label in BFO2 CLIF: [020-002] "; rdfs:isDefinedBy ; rdfs:label "material entity"@en . _:68472a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68473a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "A material entity is an independent continuant that has some portion of matter as proper or improper continuant part. (axiom label in BFO2 Reference: [019-002])"@en; . _:68474a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Every entity which has a material entity as continuant part is a material entity. (axiom label in BFO2 Reference: [020-002])"@en; . _:68475a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "every entity of which a material entity is continuant part is also a material entity. (axiom label in BFO2 Reference: [021-002])"@en; . _:68476a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "(forall (x) (if (MaterialEntity x) (IndependentContinuant x))) // axiom label in BFO2 CLIF: [019-002] "; . _:68477a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "(forall (x) (if (and (Entity x) (exists (y t) (and (MaterialEntity y) (continuantPartOfAt x y t)))) (MaterialEntity x))) // axiom label in BFO2 CLIF: [021-002] "; . _:68478a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "(forall (x) (if (and (Entity x) (exists (y t) (and (MaterialEntity y) (continuantPartOfAt y x t)))) (MaterialEntity x))) // axiom label in BFO2 CLIF: [020-002] "; . a owl:Class; rdfs:subClassOf ; owl:disjointWith _:68479a; rdfs:label "immaterial entity"@en . _:68479a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf ; "A 2D surface of an anatomical continuant."; "FMA:24137"; "surface"; "spatial"; "BSPO:0000005"; rdfs:comment "to be merged into CARO"; rdfs:label "anatomical surface" . _:6847aa a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "A 2D surface of an anatomical continuant."; "BSPO:cjm" . a owl:Class; rdfs:subClassOf , _:6847ba; "A straight line through space, intersecting an anatomical entity."; "http://upload.wikimedia.org/wikipedia/commons/3/34/Anatomical_Directions_and_Axes.JPG"; "spatial"; "BSPO:0000010"; rdfs:comment "Axis directions are defined in terms of axes."; rdfs:label "anatomical axis" . _:6847ba a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6847ca a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "A straight line through space, intersecting an anatomical entity."; "BSPO:cjm" . a owl:Class; owl:equivalentClass _:6847da; rdfs:subClassOf , _:68481a, _:68482a; "An axis that extends through an organism from head end to opposite end of body or tail."; "A-P axis", "AP axis", "anteroposterior axis"; "cephalocaudal axis", "craniocaudal axis", "rostral/caudal", "rostrocaudal axis"; "spatial"; "longitudinal axis"; "BSPO:0000013"; rdfs:comment "In sponges, AP is used to indicate the direction of movement [in larval stage] (as it is in other metazoans that move, e.g., the basal bilaterians). [PM]"; rdfs:label "anterior-posterior axis" . _:6847da a owl:Class; owl:intersectionOf _:6847ea . _:6847ea rdf:first ; rdf:rest _:68480a . _:68480a rdf:first _:6847fa; rdf:rest rdf:nil . _:6847fa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68481a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68482a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68483a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "An axis that extends through an organism from head end to opposite end of body or tail."; "BSPO:cjm" . _:68484a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "cephalocaudal axis"; "http://en.wikipedia.org/wiki/Anatomical_terms_of_location" . _:68485a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "craniocaudal axis"; . _:68486a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "rostral/caudal"; . _:68487a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "rostrocaudal axis"; . a owl:Class; rdfs:subClassOf ; "An axis that extends through an organism or organism part from the part of the organism or organism part attached to a substrate (basal) to the furthest from the attachment (apical). Note that the apical-basal axis is often used for organismal parts where there is attachment via a basal lamina or other structure."; "apical/basal"; "spatial"; "longitudinal axis"; "BSPO:0000014"; rdfs:label "apical-basal axis relative to substrate" . _:68488a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "An axis that extends through an organism or organism part from the part of the organism or organism part attached to a substrate (basal) to the furthest from the attachment (apical). Note that the apical-basal axis is often used for organismal parts where there is attachment via a basal lamina or other structure."; "BSPO:mah" . a owl:Class; rdfs:subClassOf ; "An axis that extends from the point of attachment of a structure (proximal) to the point furthest away from the plane of attachment (distal)."; "proximal/distal", "proximodistal"; "spatial"; "BSPO:0000015"; rdfs:comment "In some communities, proximal and distal are used when specifying the position of parts of elements that are contained within the body, such as gill arches or vertebral spines. In these cases, use of the classes medial-lateral axis or medial-external axis are more appropriate."; rdfs:label "proximal-distal axis" . _:68489a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "An axis that extends from the point of attachment of a structure (proximal) to the point furthest away from the plane of attachment (distal)."; "BSPO:curators", "http://en.wikipedia.org/wiki/Anatomical_terms_of_location" . a owl:Class; owl:equivalentClass _:6848aa; rdfs:subClassOf , _:6848ea . _:6848aa a owl:Class; owl:intersectionOf _:6848ba . _:6848ba rdf:first ; rdf:rest _:6848da . _:6848da rdf:first _:6848ca; rdf:rest rdf:nil . _:6848ca a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6848ea a owl:Restriction; owl:onProperty ; owl:someValuesFrom . "An axis that is approximately perpendicular to the anterior-posterior axis and that extends through the horizontal plane of the body."; "D-V axis", "DV axis", "dorsoventral axis"; "anterior-posterior axis"; "spatial"; "BSPO:0000016"; rdfs:label "dorsal-ventral axis" . _:6848fa a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "An axis that is approximately perpendicular to the anterior-posterior axis and that extends through the horizontal plane of the body."; "BSPO:curators" . _:68490a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "anterior-posterior axis"; . a owl:Class; owl:equivalentClass _:68491a; rdfs:subClassOf , _:68495a; "An axis that bisects an organism from left to right sides of body, through a sagittal plane."; "L-R axis", "LR axis", "R-L axis", "RL axis", "dextro-sinister axis", "left to right axis", "right to left axis", "right-left axis"; "spatial"; "BSPO:0000017"; rdfs:label "left-right axis" . _:68491a a owl:Class; owl:intersectionOf _:68492a . _:68492a rdf:first ; rdf:rest _:68494a . _:68494a rdf:first _:68493a; rdf:rest rdf:nil . _:68493a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68495a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68496a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "An axis that bisects an organism from left to right sides of body, through a sagittal plane."; "BSPO:cjm" . a owl:Class; rdfs:subClassOf ; "Anatomical plane that divides body into anterior and posterior parts."; "FMA:12247"; "axial plane", "axial section", "transverse section"; "spatial"; "cross-section"; "BSPO:0000018"; rdfs:label "transverse plane" . _:68497a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Anatomical plane that divides body into anterior and posterior parts."; "BSPO:mah" . a owl:Class; rdfs:subClassOf ; "Anatomical plane that divides bilateral body into dorsal and ventral parts."; "FMA:52810"; "frontal plane", "horizontal anatomical plane", "horizontal section"; "spatial"; "coronal section", "frontal section"; "BSPO:0000019"; rdfs:label "horizontal plane" . _:68498a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Anatomical plane that divides bilateral body into dorsal and ventral parts."; "BSPO:mah" . _:68499a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "horizontal anatomical plane"; "FMA:52810" . a owl:Class; owl:equivalentClass _:6849aa; rdfs:subClassOf , ; "Anatomical region that overlaps the anterior and dorsal regions of a body or body part."; "Melissa Haendel"; "2009-06-15T01:01:38Z"; "anterodorsal region "; "spatial"; "BSPO:0000026"; rdfs:label "antero-dorsal region" . _:6849aa a owl:Class; owl:intersectionOf _:6849ba . _:6849ba rdf:first ; rdf:rest _:6849da . _:6849da rdf:first _:6849ca; rdf:rest _:6849fa . _:6849ca a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6849fa rdf:first _:6849ea; rdf:rest rdf:nil . _:6849ea a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:684a0a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Anatomical region that overlaps the anterior and dorsal regions of a body or body part."; "BSPO:wd" . a owl:Class; owl:equivalentClass _:684a1a; rdfs:subClassOf , ; "Anatomical region that overlaps the anterior and ventral regions of a body or body part."; "Melissa Haendel"; "2009-06-15T01:04:59Z"; "anteroventral region "; "spatial"; "BSPO:0000027"; rdfs:label "antero-ventral region" . _:684a1a a owl:Class; owl:intersectionOf _:684a2a . _:684a2a rdf:first ; rdf:rest _:684a4a . _:684a4a rdf:first _:684a3a; rdf:rest _:684a6a . _:684a3a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:684a6a rdf:first _:684a5a; rdf:rest rdf:nil . _:684a5a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:684a7a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Anatomical region that overlaps the anterior and ventral regions of a body or body part."; "BSPO:wd" . a owl:Class; owl:equivalentClass _:684a8a; rdfs:subClassOf , ; "Anatomical region that overlaps the posterior and lateral regions of the body or body part."; "Melissa Haendel"; "2009-06-15T01:06:01Z"; "posterolateral region"; "spatial"; "BSPO:0000028"; rdfs:label "postero-lateral region" . _:684a8a a owl:Class; owl:intersectionOf _:684a9a . _:684a9a rdf:first ; rdf:rest _:684aba . _:684aba rdf:first _:684aaa; rdf:rest _:684ada . _:684aaa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:684ada rdf:first _:684aca; rdf:rest rdf:nil . _:684aca a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:684aea a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Anatomical region that overlaps the posterior and lateral regions of the body or body part."; "BSPO:wd" . a owl:Class; owl:equivalentClass _:684afa; rdfs:subClassOf , ; "Anatomical region that overlaps the anterior and lateral regions of a body or body part."; "Melissa Haendel"; "2009-06-15T01:07:18Z"; "anterolateral region"; "spatial"; "BSPO:0000029"; rdfs:label "antero-lateral region" . _:684afa a owl:Class; owl:intersectionOf _:684b0a . _:684b0a rdf:first ; rdf:rest _:684b2a . _:684b2a rdf:first _:684b1a; rdf:rest _:684b4a . _:684b1a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:684b4a rdf:first _:684b3a; rdf:rest rdf:nil . _:684b3a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:684b5a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Anatomical region that overlaps the anterior and lateral regions of a body or body part."; "BSPO:wd" . a owl:Class; owl:equivalentClass _:684b6a; rdfs:subClassOf , ; "Anatomical region that overlaps the posterior and dorsal regions of the body or body part."; "Melissa Haendel"; "2009-06-15T01:08:13Z"; "posterodorsal region"; "spatial"; "BSPO:0000030"; rdfs:label "postero-dorsal region" . _:684b6a a owl:Class; owl:intersectionOf _:684b7a . _:684b7a rdf:first ; rdf:rest _:684b9a . _:684b9a rdf:first _:684b8a; rdf:rest _:684bba . _:684b8a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:684bba rdf:first _:684baa; rdf:rest rdf:nil . _:684baa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:684bca a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Anatomical region that overlaps the posterior and dorsal regions of the body or body part."; "BSPO:wd" . a owl:Class; owl:equivalentClass _:684bda; rdfs:subClassOf , ; "Anatomical region that overlaps the posterior and ventral regions of a body or body part."; "Melissa Haendel"; "2009-06-15T01:08:38Z"; "posteroventral region"; "spatial"; "BSPO:0000035"; rdfs:label "postero-ventral region" . _:684bda a owl:Class; owl:intersectionOf _:684bea . _:684bea rdf:first ; rdf:rest _:684c0a . _:684c0a rdf:first _:684bfa; rdf:rest _:684c2a . _:684bfa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:684c2a rdf:first _:684c1a; rdf:rest rdf:nil . _:684c1a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:684c3a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Anatomical region that overlaps the posterior and ventral regions of a body or body part."; "BSPO:wd" . a owl:Class; rdfs:subClassOf ; "An anatomical region bounded by a plane perpendicular to an axis through the middle."; "FBql:00005841"; "spatial"; "BSPO:0000054"; rdfs:label "anatomical side" . _:684c4a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "An anatomical region bounded by a plane perpendicular to an axis through the middle."; "BSPO:cjm" . a owl:Class; rdfs:subClassOf , _:684c5a, _:684c6a, _:684c7a; "An anatomical region that is the entire part of an anatomical structure anterior to a transverse plane and bounded on one side by the same transverse plane."; "FBcv:0000053", "FBql:00005848"; "anterior", "rostral"; "spatial"; "BSPO:0000055"; rdfs:label "anterior side" . _:684c5a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:684c6a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:684c7a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:684c8a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "An anatomical region that is the entire part of an anatomical structure anterior to a transverse plane and bounded on one side by the same transverse plane."; "BSPO:RW" . a owl:Class; rdfs:subClassOf , _:684c9a, _:684caa; "An anatomical region that is the entire part of an anatomical structure posterior to a transverse plane and bounded on one side by the same transverse plane."; "FBcv:0000065", "FBql:00005849"; "posterior"; "caudal"; "spatial"; "BSPO:0000056"; rdfs:label "posterior side" . _:684c9a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:684caa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:684cba a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "An anatomical region that is the entire part of an anatomical structure posterior to a transverse plane and bounded on one side by the same transverse plane."; "BSPO:RW", "BSPO:wd" . _:684cca a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "caudal"; . a owl:Class; rdfs:subClassOf , _:684cda, _:684cea; "Anatomical side that is located on the apical end of an organism or structure."; "FBcv:0000054", "FBql:00005854"; "apical"; "spatial"; "BSPO:0000057"; rdfs:label "apical side" . _:684cda a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:684cea a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:684cfa a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Anatomical side that is located on the apical end of an organism or structure."; "BSPO:wd" . a owl:Class; rdfs:subClassOf , _:684d0a; "Anatomical side that is located on the basal end of an organism or structure."; "FBcv:0000055", "FBql:00005855"; "basal"; "spatial"; "BSPO:0000058"; rdfs:comment "The part of the organism attached to a substrate. Axis of symmetry."; rdfs:label "basal side" . _:684d0a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:684d1a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Anatomical side that is located on the basal end of an organism or structure."; "BSPO:wd" . a owl:Class; rdfs:subClassOf , _:684d2a, _:684d3a, _:684d4a; "An anatomical region that is the entire part of an anatomical structure dorsal to a horizontal plane and bounded on one side by the same transverse plane."; "FBcv:0000059", "FBql:00005842"; "dorsal"; "spatial"; "BSPO:0000063"; rdfs:label "dorsal side" . _:684d2a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:684d3a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:684d4a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:684d5a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "An anatomical region that is the entire part of an anatomical structure dorsal to a horizontal plane and bounded on one side by the same transverse plane."; "BSPO:wd" . a owl:Class; rdfs:subClassOf ; "FBcv:0000063", "FBql:00005844"; "lateral"; "spatial"; "BSPO:0000066"; rdfs:label "lateral side" . a owl:Class; rdfs:subClassOf , _:684d6a; "An anatomical region that is the entire part of an anatomical structure ventral to a horizontal plane and bounded on one side by the same horizontal plane."; "FBcv:0000070", "FBql:00005843"; "ventral"; "spatial"; "BSPO:0000068"; rdfs:label "ventral side" . _:684d6a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:684d7a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "An anatomical region that is the entire part of an anatomical structure ventral to a horizontal plane and bounded on one side by the same horizontal plane."; "BSPO:RW", "BSPO:wd" . a owl:Class; rdfs:subClassOf ; "A 3D region in space without well-defined compartmental boundaries; for example, the dorsal region of an ectoderm."; "FBql:00005841"; "spatial"; "BSPO:0000070"; rdfs:comment "to be merged into CARO"; rdfs:label "anatomical region" . _:684d8a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "A 3D region in space without well-defined compartmental boundaries; for example, the dorsal region of an ectoderm."; "BSPO:cjm" . a owl:Class; owl:equivalentClass _:684d9a; rdfs:subClassOf , _:684dda; "Anatomical region anteriorly located on the body or body part."; "FBql:00005848"; "spatial"; "BSPO:0000071"; rdfs:label "anterior region" . _:684d9a a owl:Class; owl:intersectionOf _:684daa . _:684daa rdf:first ; rdf:rest _:684dca . _:684dca rdf:first _:684dba; rdf:rest rdf:nil . _:684dba a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:684dda a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:684dea a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Anatomical region anteriorly located on the body or body part."; "BSPO:wd" . a owl:Class; owl:equivalentClass _:684dfa; rdfs:subClassOf , _:684e3a; "Anatomical region posteriorly located on the body or body part."; "FBql:00005849"; "spatial"; "BSPO:0000072"; rdfs:label "posterior region" . _:684dfa a owl:Class; owl:intersectionOf _:684e0a . _:684e0a rdf:first ; rdf:rest _:684e2a . _:684e2a rdf:first _:684e1a; rdf:rest rdf:nil . _:684e1a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:684e3a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:684e4a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Anatomical region posteriorly located on the body or body part."; "BSPO:wd" . a owl:Class; owl:equivalentClass _:684e5a; rdfs:subClassOf , _:684e9a; "Anatomical region located on the apical end on the body or body part."; "FBql:00005854"; "spatial"; "BSPO:0000073"; rdfs:label "apical region" . _:684e5a a owl:Class; owl:intersectionOf _:684e6a . _:684e6a rdf:first ; rdf:rest _:684e8a . _:684e8a rdf:first _:684e7a; rdf:rest rdf:nil . _:684e7a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:684e9a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:684eaa a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Anatomical region located on the apical end on the body or body part."; "BSPO:wd" . a owl:Class; owl:equivalentClass _:684eba; rdfs:subClassOf , _:684efa; "Anatomical region located basally on the body or body part."; "FBql:00005855"; "spatial"; "BSPO:0000074"; rdfs:label "basal region" . _:684eba a owl:Class; owl:intersectionOf _:684eca . _:684eca rdf:first ; rdf:rest _:684eea . _:684eea rdf:first _:684eda; rdf:rest rdf:nil . _:684eda a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:684efa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:684f0a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Anatomical region located basally on the body or body part."; "BSPO:wd" . a owl:Class; owl:equivalentClass _:684f1a; rdfs:subClassOf , _:684f5a; "Anatomical region dorsally located on the body or body part."; "FBql:00005842"; "spatial"; "BSPO:0000079"; rdfs:label "dorsal region" . _:684f1a a owl:Class; owl:intersectionOf _:684f2a . _:684f2a rdf:first ; rdf:rest _:684f4a . _:684f4a rdf:first _:684f3a; rdf:rest rdf:nil . _:684f3a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:684f5a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:684f6a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Anatomical region dorsally located on the body or body part."; "BSPO:wd" . a owl:Class; owl:equivalentClass _:684f7a; rdfs:subClassOf , ; "Anatomical region that overlaps the dorsal and lateral regions of a body or body part."; "FBql:00005845"; "dorsolateral region"; "spatial"; "BSPO:0000080"; rdfs:label "dorso-lateral region" . _:684f7a a owl:Class; owl:intersectionOf _:684f8a . _:684f8a rdf:first ; rdf:rest _:684faa . _:684faa rdf:first _:684f9a; rdf:rest _:684fca . _:684f9a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:684fca rdf:first _:684fba; rdf:rest rdf:nil . _:684fba a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:684fda a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Anatomical region that overlaps the dorsal and lateral regions of a body or body part."; "BSPO:wd" . a owl:Class; owl:equivalentClass _:684fea; rdfs:subClassOf , _:68502a; "Anatomical region laterally located on the body or body part."; "FBql:00005844"; "spatial"; "BSPO:0000082"; rdfs:label "lateral region" . _:684fea a owl:Class; owl:intersectionOf _:684ffa . _:684ffa rdf:first ; rdf:rest _:68501a . _:68501a rdf:first _:68500a; rdf:rest rdf:nil . _:68500a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68502a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68503a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Anatomical region laterally located on the body or body part."; "BSPO:wd" . a owl:Class; owl:equivalentClass _:68504a; rdfs:subClassOf , _:68508a; "Anatomical region ventrally located on the body or body part."; "FBql:00005843"; "spatial"; "BSPO:0000084"; rdfs:label "ventral region" . _:68504a a owl:Class; owl:intersectionOf _:68505a . _:68505a rdf:first ; rdf:rest _:68507a . _:68507a rdf:first _:68506a; rdf:rest rdf:nil . _:68506a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68508a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68509a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Anatomical region ventrally located on the body or body part."; "BSPO:wd" . a owl:Class; owl:equivalentClass _:6850aa; rdfs:subClassOf , ; "Anatomical region that overlaps the ventral and lateral regions of a body or body part."; "FBql:00005846"; "ventrolateral region"; "spatial"; "BSPO:0000085"; rdfs:comment "This is an example of a composition of two axis positions."; rdfs:label "ventro-lateral region" . _:6850aa a owl:Class; owl:intersectionOf _:6850ba . _:6850ba rdf:first ; rdf:rest _:6850da . _:6850da rdf:first _:6850ca; rdf:rest _:6850fa . _:6850ca a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6850fa rdf:first _:6850ea; rdf:rest rdf:nil . _:6850ea a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68510a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Anatomical region that overlaps the ventral and lateral regions of a body or body part."; "BSPO:wd" . a owl:Class; rdfs:subClassOf ; "FBql:00005873", "FMA:9647"; "spatial"; "BSPO:0000086"; rdfs:comment "to be merged into CARO"; rdfs:label "anatomical compartment" . a owl:Class; rdfs:subClassOf ; "FBql:00005881"; "spatial"; "BSPO:0000092"; rdfs:comment "to be merged into CARO"; rdfs:label "anatomical compartment boundary" . a owl:Class; rdfs:subClassOf ; "FBcv:0000034", "FBql:00005879"; "spatial"; "BSPO:0000094"; rdfs:label "dorsal/ventral compartment boundary" . a owl:Class; rdfs:subClassOf ; "An anatomical axis that extends from the center of the body outwards or externally."; "wasila.dahdul"; "2013-07-02T11:21:42Z"; "spatial"; "proximal-distal axis"; "BSPO:0000196"; rdfs:comment "The medial-external axis could apply to a sphere-shaped body."; rdfs:label "medial-external axis" . _:68511a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "An anatomical axis that extends from the center of the body outwards or externally."; "BSPO:curators" . a owl:Class; rdfs:subClassOf ; "An axis that extends from the oral opening to the furthest point in an organism that is directly opposite."; "wasila.dahdul"; "2013-07-02T11:29:33Z"; "spatial"; "BSPO:0000198"; rdfs:label "oral-aboral axis" . _:68512a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "An axis that extends from the oral opening to the furthest point in an organism that is directly opposite."; "BSPO:PM" . a owl:Class; owl:equivalentClass _:68513a; rdfs:subClassOf , _:68517a; "Anatomical surface that is located on the anterior side of the body or body part."; "FBql:00005848"; "spatial"; "BSPO:0000371"; rdfs:label "anterior surface" . _:68513a a owl:Class; owl:intersectionOf _:68514a . _:68514a rdf:first ; rdf:rest _:68516a . _:68516a rdf:first _:68515a; rdf:rest rdf:nil . _:68515a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68517a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68518a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Anatomical surface that is located on the anterior side of the body or body part."; "BSPO:wd" . a owl:Class; owl:equivalentClass _:68519a; rdfs:subClassOf , _:6851da; "Anatomical surface that is located on the posterior side of the body or body part."; "FBql:00005849"; "spatial"; "BSPO:0000372"; rdfs:label "posterior surface" . _:68519a a owl:Class; owl:intersectionOf _:6851aa . _:6851aa rdf:first ; rdf:rest _:6851ca . _:6851ca rdf:first _:6851ba; rdf:rest rdf:nil . _:6851ba a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6851da a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6851ea a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Anatomical surface that is located on the posterior side of the body or body part."; "BSPO:wd" . a owl:Class; owl:equivalentClass _:6851fa; rdfs:subClassOf , _:68523a; "Anatomical surface that is located on the apical side of the body or body part."; "FBql:00005854"; "spatial"; "BSPO:0000373"; rdfs:label "apical surface" . _:6851fa a owl:Class; owl:intersectionOf _:68520a . _:68520a rdf:first ; rdf:rest _:68522a . _:68522a rdf:first _:68521a; rdf:rest rdf:nil . _:68521a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68523a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68524a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Anatomical surface that is located on the apical side of the body or body part."; "BSPO:wd" . a owl:Class; owl:equivalentClass _:68525a; rdfs:subClassOf , _:68529a; "Anatomical surface that is located on the basal side of the body or body part."; "FBql:00005855"; "spatial"; "BSPO:0000374"; rdfs:label "basal surface" . _:68525a a owl:Class; owl:intersectionOf _:68526a . _:68526a rdf:first ; rdf:rest _:68528a . _:68528a rdf:first _:68527a; rdf:rest rdf:nil . _:68527a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68529a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6852aa a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Anatomical surface that is located on the basal side of the body or body part."; "BSPO:wd" . a owl:Class; owl:equivalentClass _:6852ba; rdfs:subClassOf , _:6852fa; "Anatomical surface that located on the dorsal side of the body or body part."; "FBql:00005842"; "spatial"; "BSPO:0000379"; rdfs:label "dorsal surface" . _:6852ba a owl:Class; owl:intersectionOf _:6852ca . _:6852ca rdf:first ; rdf:rest _:6852ea . _:6852ea rdf:first _:6852da; rdf:rest rdf:nil . _:6852da a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6852fa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68530a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Anatomical surface that located on the dorsal side of the body or body part."; "BSPO:wd" . a owl:Class; owl:equivalentClass _:68531a; rdfs:subClassOf , _:68535a; "Anatomical surface that located on the lateral side of the body or body part."; "FBql:00005844"; "spatial"; "BSPO:0000382"; rdfs:label "lateral surface" . _:68531a a owl:Class; owl:intersectionOf _:68532a . _:68532a rdf:first ; rdf:rest _:68534a . _:68534a rdf:first _:68533a; rdf:rest rdf:nil . _:68533a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68535a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68536a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Anatomical surface that located on the lateral side of the body or body part."; "BSPO:wd" . a owl:Class; owl:equivalentClass _:68537a; rdfs:subClassOf , _:6853ba; "Anatomical surface that is located on the ventral side of the body or body part."; "FBql:00005843"; "spatial"; "BSPO:0000384"; rdfs:label "ventral surface" . _:68537a a owl:Class; owl:intersectionOf _:68538a . _:68538a rdf:first ; rdf:rest _:6853aa . _:6853aa rdf:first _:68539a; rdf:rest rdf:nil . _:68539a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6853ba a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6853ca a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Anatomical surface that is located on the ventral side of the body or body part."; "BSPO:wd" . a owl:Class; rdfs:subClassOf ; "A flat 2D plane intersecting an anatomical continuant, dividing it into two adjacent portions."; "FMA:242982"; "anatomical cross-section", "anatomical section", "plane", "section"; "spatial"; "cross-section"; "BSPO:0000400"; rdfs:comment "These anatomical sections are applicable to most bilaterally symmetrical animals, but bipedal animals such as humans have more complex usage of these terms. For example, in post-embryonic humans a coronal plane is vertical and a transverse plane is horizontal, but for embryos and quadrupeds a coronal plane is horizontal and a transverse plane is vertical."; rdfs:label "anatomical plane" . _:6853da a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "A flat 2D plane intersecting an anatomical continuant, dividing it into two adjacent portions."; "BSPO:cjm" . a owl:Class; owl:equivalentClass _:6853ea; rdfs:subClassOf , , _:68546a, _:68547a, _:68548a; "Anatomical plane that divides a bilateral body into left and right parts, not necessarily of even size."; "FMA:11361"; "left/right plane", "median plane", "sagittal section"; "spatial"; "BSPO:0000417"; rdfs:label "sagittal plane" . _:6853ea a owl:Class; owl:intersectionOf _:6853fa . _:6853fa rdf:first ; rdf:rest _:68541a . _:68541a rdf:first _:68540a; rdf:rest _:68543a . _:68540a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68543a rdf:first _:68542a; rdf:rest _:68545a . _:68542a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68545a rdf:first _:68544a; rdf:rest rdf:nil . _:68544a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68546a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68547a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68548a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68549a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Anatomical plane that divides a bilateral body into left and right parts, not necessarily of even size."; "BSPO:DOS", "BSPO:cjm", "BSPO:mah" . a owl:Class; rdfs:subClassOf ; "An axis that extends from the center of organism to one or other side."; "http://upload.wikimedia.org/wikipedia/commons/3/34/Anatomical_Directions_and_Axes.JPG"; "M-L axis", "ML axis", "medio-lateral axis", "mediolateral axis"; "spatial"; "proximal-distal axis "; "BSPO:0001001"; rdfs:comment "Properly, the ML axis is a half axis; practically, its usage is less clumsy and less linguistically biased than \"left-right\". The terms may still be used relatively to describe locations along the LR axis. The gills are medial to the operculum, but lateral to the heart."; rdfs:label "medial-lateral axis" . _:6854aa a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "An axis that extends from the center of organism to one or other side."; "BSPO:cjm" . a owl:Class; rdfs:subClassOf ; "A part of a cellular organism that is either an immaterial entity or a material entity with granularity above the level of a protein complex. Or, a substance produced by a cellular organism with granularity above the level of a protein complex.", "Biological entity that is either an individual member of a biological species or constitutes the structural organization of an individual member of a biological species."; ; "spatial"; "CARO:0000000"; rdfs:comment "Following BFO, material anatomical entities may have immaterial parts (the lumen of your stomach is part of your stomach). The granularity limit follows the limits set by the Gene Ontology on the granularity limit for GO:cellular_component. Note that substances produced by an organism (sweat, feaces, urine) do not need to be part of an organism to qualify as an anatomical structure."; rdfs:label "anatomical entity", "anatomical entity"@en . _:6854ba a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "A part of a cellular organism that is either an immaterial entity or a material entity with granularity above the level of a protein complex. Or, a substance produced by a cellular organism with granularity above the level of a protein complex."; "CAROC:Brownsville2014" . _:6854ca a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Biological entity that is either an individual member of a biological species or constitutes the structural organization of an individual member of a biological species."; "CARO:MAH" . a owl:Class; rdfs:subClassOf ; "Material anatomical entity that is a single connected structure with inherent 3D shape generated by coordinated expression of the organism's own genome."; ; "spatial"; "CARO:0000003"; rdfs:label "anatomical structure", "connected anatomical structure"@en . _:6854da a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Material anatomical entity that is a single connected structure with inherent 3D shape generated by coordinated expression of the organism's own genome."; "CC:DOS" . a owl:Class; rdfs:subClassOf , ; "An anatomical entity that has mass."; ; "spatial"; "CARO:0000006"; rdfs:label "material anatomical entity", "material anatomical entity"@en . _:6854ea a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "An anatomical entity that has mass."; "CC:DOS" . a owl:Class; rdfs:subClassOf , ; "An anatomical entity that has no mass."; "spatial"; "CARO:0000007"; rdfs:label "immaterial anatomical entity" . _:6854fa a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "An anatomical entity that has no mass."; "CC:DOS" . a owl:Class; rdfs:subClassOf ; "A one dimensional, immaterial anatomical entity."; "spatial"; "CARO:0000008"; rdfs:label "anatomical line" . _:68550a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "A one dimensional, immaterial anatomical entity."; "CC:DOS" . a owl:Class; rdfs:subClassOf ; "A non-material anatomical entity of two dimensions. Anatomical boundaries are contiguous structures."; "spatial"; "CARO:0000010"; rdfs:label "anatomical boundary" . _:68551a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "A non-material anatomical entity of two dimensions. Anatomical boundaries are contiguous structures."; "CC:DOS" . a owl:Class; rdfs:subClassOf ; rdfs:label "biological entity" . a owl:Class; rdfs:subClassOf ; owl:disjointWith ; "The production of new individuals that contain some portion of genetic material inherited from one or more parent organisms."; "GO:0019952", "GO:0050876"; "Wikipedia:Reproduction"; "reproductive physiological process"; "biological_process"; "GO:0000003"; , , , , ; rdfs:label "reproduction" . _:68552a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "The production of new individuals that contain some portion of genetic material inherited from one or more parent organisms."; "GOC:go_curators", "GOC:isa_complete", "GOC:jl", "ISBN:0198506732" . a owl:Class; rdfs:subClassOf , _:68553a; "The cell cycle 'gap' phase which is the interval between the completion of DNA segregation by mitosis and the beginning of DNA synthesis."; "G1 phase of mitotic cell cycle"; "biological_process"; "GO:0000080"; ; rdfs:comment "Note that this term should not be used for direct annotation. If you are trying to make an annotation to x phase, it is likely that the correct annotation is 'regulation of x/y phase transition' or to a process which occurs during the reported phase (i.e mitotic DNA replication for mitotic S-phase). To capture the phase when a specific location or process is observed, the phase term can be used in an annotation extension (PMID:24885854) applied to a cellular component term (with the relation exists_during) or a biological process term (with the relation happens_during)."; rdfs:label "mitotic G1 phase" . _:68553a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68554a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "The cell cycle 'gap' phase which is the interval between the completion of DNA segregation by mitosis and the beginning of DNA synthesis."; "GOC:mtg_cell_cycle" . a owl:Class; rdfs:subClassOf , _:68555a; "The cell cycle phase, following G1, during which DNA synthesis takes place as part of a mitotic cell cycle."; "S phase of mitotic cell cycle", "S-phase of mitotic cell cycle"; "biological_process"; "GO:0000084"; ; rdfs:comment "Note that this term should not be used for direct annotation. If you are trying to make an annotation to x phase, it is likely that the correct annotation is 'regulation of x/y phase transition' or to a process which occurs during the reported phase (i.e mitotic DNA replication for mitotic S-phase). To capture the phase when a specific location or process is observed, the phase term can be used in an annotation extension (PMID:24885854) applied to a cellular component term (with the relation exists_during) or a biological process term (with the relation happens_during)."; rdfs:label "mitotic S phase" . _:68555a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68556a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "The cell cycle phase, following G1, during which DNA synthesis takes place as part of a mitotic cell cycle."; "GOC:mtg_cell_cycle" . a owl:Class; rdfs:subClassOf , _:68557a; "The cell cycle 'gap' phase which is the interval between the completion of DNA synthesis and the beginning of DNA segregation by mitosis."; "G2 phase of mitotic cell cycle"; "biological_process"; "GO:0000085"; ; rdfs:comment "Note that this term should not be used for direct annotation. If you are trying to make an annotation to x phase, it is likely that the correct annotation is 'regulation of x/y phase transition' or to a process which occurs during the reported phase (i.e mitotic DNA replication for mitotic S-phase). To capture the phase when a specific location or process is observed, the phase term can be used in an annotation extension (PMID:24885854) applied to a cellular component term (with the relation exists_during) or a biological process term (with the relation happens_during)."; rdfs:label "mitotic G2 phase" . _:68557a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68558a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "The cell cycle 'gap' phase which is the interval between the completion of DNA synthesis and the beginning of DNA segregation by mitosis."; "GOC:mtg_cell_cycle" . a owl:Class; owl:equivalentClass _:68559a; rdfs:subClassOf , ; "A cell cycle phase during which nuclear division occurs, and which is comprises the phases: prophase, metaphase, anaphase and telophase and occurs as part of a mitotic cell cycle."; "M phase of mitotic cell cycle", "M-phase of mitotic cell cycle"; "biological_process"; "GO:0000087"; ; rdfs:comment "Note that this term should not be used for direct annotation. If you are trying to make an annotation to x phase, it is likely that the correct annotation is 'regulation of x/y phase transition' or to a process which occurs during the reported phase (i.e mitotic DNA replication for mitotic S-phase). To capture the phase when a specific location or process is observed, the phase term can be used in an annotation extension (PMID:24885854) applied to a cellular component term (with the relation exists_during) or a biological process term (with the relation happens_during)."; rdfs:label "mitotic M phase" . _:68559a a owl:Class; owl:intersectionOf _:6855aa . _:6855aa rdf:first ; rdf:rest _:6855ca . _:6855ca rdf:first _:6855ba; rdf:rest rdf:nil . _:6855ba a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6855da a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "A cell cycle phase during which nuclear division occurs, and which is comprises the phases: prophase, metaphase, anaphase and telophase and occurs as part of a mitotic cell cycle."; "GOC:mtg_cell_cycle" . a owl:Class; rdfs:subClassOf , _:6855ea; "The cell cycle phase which is the first stage of M phase of mitosis and during which chromosomes condense and the two daughter centrioles and their asters migrate toward the poles of the cell."; "biological_process"; "GO:0000088"; ; rdfs:comment "Note that this term should not be used for direct annotation. If you are trying to make an annotation to x phase, it is likely that the correct annotation is 'regulation of x/y phase transition' or to a process which occurs during the reported phase (i.e mitotic DNA replication for mitotic S-phase). To capture the phase when a specific location or process is observed, the phase term can be used in an annotation extension (PMID:24885854) applied to a cellular component term (with the relation exists_during) or a biological process term (with the relation happens_during)."; rdfs:label "mitotic prophase" . _:6855ea a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6855fa a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "The cell cycle phase which is the first stage of M phase of mitosis and during which chromosomes condense and the two daughter centrioles and their asters migrate toward the poles of the cell."; "GOC:mtg_cell_cycle" . a owl:Class; rdfs:subClassOf , _:68560a; "The cell cycle phase, following prophase, during which chromosomes become aligned on the equatorial plate of the cell as part of a mitotic cell cycle."; "biological_process"; "GO:0000089"; ; rdfs:comment "Note that this term should not be used for direct annotation. If you are trying to make an annotation to x phase, it is likely that the correct annotation is 'regulation of x/y phase transition' or to a process which occurs during the reported phase (i.e mitotic DNA replication for mitotic S-phase). To capture the phase when a specific location or process is observed, the phase term can be used in an annotation extension (PMID:24885854) applied to a cellular component term (with the relation exists_during) or a biological process term (with the relation happens_during)."; rdfs:label "mitotic metaphase" . _:68560a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68561a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "The cell cycle phase, following prophase, during which chromosomes become aligned on the equatorial plate of the cell as part of a mitotic cell cycle."; "GOC:mtg_cell_cycle" . a owl:Class; rdfs:subClassOf , _:68562a; "The cell cycle phase during which chromosomes separate and migrate towards the poles of the spindle the as part of a mitotic cell cycle."; "biological_process"; "GO:0000090"; ; rdfs:comment "Note that this term should not be used for direct annotation. If you are trying to make an annotation to x phase, it is likely that the correct annotation is 'regulation of x/y phase transition' or to a process which occurs during the reported phase (i.e mitotic DNA replication for mitotic S-phase). To capture the phase when a specific location or process is observed, the phase term can be used in an annotation extension (PMID:24885854) applied to a cellular component term (with the relation exists_during) or a biological process term (with the relation happens_during)."; rdfs:label "mitotic anaphase" . _:68562a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68563a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "The cell cycle phase during which chromosomes separate and migrate towards the poles of the spindle the as part of a mitotic cell cycle."; "GOC:mtg_cell_cycle" . a owl:Class; rdfs:subClassOf , _:68564a; "The cell cycle phase which follows anaphase during M phase of mitosis and during which the chromosomes arrive at the poles of the cell and the division of the cytoplasm starts."; "biological_process"; "GO:0000093"; ; rdfs:comment "Note that this term should not be used for direct annotation. If you are trying to make an annotation to x phase, it is likely that the correct annotation is 'regulation of x/y phase transition' or to a process which occurs during the reported phase (i.e mitotic DNA replication for mitotic S-phase). To capture the phase when a specific location or process is observed, the phase term can be used in an annotation extension (PMID:24885854) applied to a cellular component term (with the relation exists_during) or a biological process term (with the relation happens_during)."; rdfs:label "mitotic telophase" . _:68564a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68565a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "The cell cycle phase which follows anaphase during M phase of mitosis and during which the chromosomes arrive at the poles of the cell and the division of the cytoplasm starts."; "GOC:mtg_cell_cycle" . a owl:Class; rdfs:subClassOf , _:68566a; "The cell cycle phase which is the first stage of prophase I in meiosis, and during which the chromosomes first become visible."; "Wikipedia:Leptotene", "Wikipedia:Meiosis#Leptotene"; "biological_process"; "GO:0000237"; ; rdfs:comment "Note that this term should not be used for direct annotation. If you are trying to make an annotation to x phase, it is likely that the correct annotation is 'regulation of x/y phase transition' or to a process which occurs during the reported phase (i.e mitotic DNA replication for mitotic S-phase). To capture the phase when a specific location or process is observed, the phase term can be used in an annotation extension (PMID:24885854) applied to a cellular component term (with the relation exists_during) or a biological process term (with the relation happens_during)."; rdfs:label "leptotene" . _:68566a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68567a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "The cell cycle phase which is the first stage of prophase I in meiosis, and during which the chromosomes first become visible."; "GOC:mtg_cell_cycle" . a owl:Class; rdfs:subClassOf , _:68568a; "The cell cycle phase which follows leptotene during prophase I of meiosis, and during which each chromosome pairs with its homolog; the two become aligned and crossing over may occur."; "Wikipedia:Meiosis#Zygotene", "Wikipedia:Zygotene"; "biological_process"; "GO:0000238"; ; rdfs:comment "Note that this term should not be used for direct annotation. If you are trying to make an annotation to x phase, it is likely that the correct annotation is 'regulation of x/y phase transition' or to a process which occurs during the reported phase (i.e mitotic DNA replication for mitotic S-phase). To capture the phase when a specific location or process is observed, the phase term can be used in an annotation extension (PMID:24885854) applied to a cellular component term (with the relation exists_during) or a biological process term (with the relation happens_during)."; rdfs:label "zygotene" . _:68568a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68569a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "The cell cycle phase which follows leptotene during prophase I of meiosis, and during which each chromosome pairs with its homolog; the two become aligned and crossing over may occur."; "GOC:mtg_cell_cycle" . a owl:Class; rdfs:subClassOf , _:6856aa; "The cell cycle phase which follows zygotene during prophase I of meiosis, and during which crossing over occurs between a chromatid in one partner and another chromatid in the homologous chromosome."; "Wikipedia:Meiosis#Pachytene", "Wikipedia:Pachytene"; "biological_process"; "GO:0000239"; ; rdfs:comment "Note that this term should not be used for direct annotation. If you are trying to make an annotation to x phase, it is likely that the correct annotation is 'regulation of x/y phase transition' or to a process which occurs during the reported phase (i.e mitotic DNA replication for mitotic S-phase). To capture the phase when a specific location or process is observed, the phase term can be used in an annotation extension (PMID:24885854) applied to a cellular component term (with the relation exists_during) or a biological process term (with the relation happens_during)."; rdfs:label "pachytene" . _:6856aa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6856ba a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "The cell cycle phase which follows zygotene during prophase I of meiosis, and during which crossing over occurs between a chromatid in one partner and another chromatid in the homologous chromosome."; "GOC:mtg_cell_cycle" . a owl:Class; rdfs:subClassOf , _:6856ca; "The cell cycle phase which follows pachytene during prophase I of meiosis, during which the homologous chromosomes begin to separate and the synaptonemal complex dissolves."; "Wikipedia:Diplotene", "Wikipedia:Meiosis#Diplotene"; "biological_process"; "GO:0000240"; ; rdfs:comment "Note that this term should not be used for direct annotation. If you are trying to make an annotation to x phase, it is likely that the correct annotation is 'regulation of x/y phase transition' or to a process which occurs during the reported phase (i.e mitotic DNA replication for mitotic S-phase). To capture the phase when a specific location or process is observed, the phase term can be used in an annotation extension (PMID:24885854) applied to a cellular component term (with the relation exists_during) or a biological process term (with the relation happens_during)."; rdfs:label "diplotene" . _:6856ca a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6856da a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "The cell cycle phase which follows pachytene during prophase I of meiosis, during which the homologous chromosomes begin to separate and the synaptonemal complex dissolves."; "GOC:mtg_cell_cycle" . a owl:Class; rdfs:subClassOf , _:6856ea; "The cell cycle phase which follows diplotene during prophase I of meiosis, the separation of homologous chromosomes is complete and crossing over has occurred."; "Wikipedia:Diakinesis", "Wikipedia:Meiosis#Diakinesis"; "biological_process"; "GO:0000241"; ; rdfs:comment "Note that this term should not be used for direct annotation. If you are trying to make an annotation to x phase, it is likely that the correct annotation is 'regulation of x/y phase transition' or to a process which occurs during the reported phase (i.e mitotic DNA replication for mitotic S-phase). To capture the phase when a specific location or process is observed, the phase term can be used in an annotation extension (PMID:24885854) applied to a cellular component term (with the relation exists_during) or a biological process term (with the relation happens_during)."; rdfs:label "diakinesis" . _:6856ea a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6856fa a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "The cell cycle phase which follows diplotene during prophase I of meiosis, the separation of homologous chromosomes is complete and crossing over has occurred."; "GOC:mtg_cell_cycle" . a owl:Class; owl:equivalentClass _:68570a; rdfs:subClassOf , _:68574a; "Progression through the phases of the mitotic cell cycle, the most common eukaryotic cell cycle, which canonically comprises four successive phases called G1, S, G2, and M and includes replication of the genome and the subsequent segregation of chromosomes into daughter cells. In some variant cell cycles nuclear replication or nuclear division may not be followed by cell division, or G1 and G2 phases may be absent."; "GO:0007067"; "Wikipedia:Mitosis"; "biological_process"; "mitosis"; "GO:0000278"; , , , ; rdfs:comment "Note that this term should not be confused with 'GO:0140014 ; mitotic nuclear division'. 'GO:0000278 ; mitotic cell cycle represents the entire mitotic cell cycle, while 'GO:0140014 ; mitotic nuclear division' specifically represents the actual nuclear division step of the mitotic cell cycle."; rdfs:label "mitotic cell cycle" . _:68570a a owl:Class; owl:intersectionOf _:68571a . _:68571a rdf:first ; rdf:rest _:68573a . _:68573a rdf:first _:68572a; rdf:rest rdf:nil . _:68572a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68574a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68575a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Progression through the phases of the mitotic cell cycle, the most common eukaryotic cell cycle, which canonically comprises four successive phases called G1, S, G2, and M and includes replication of the genome and the subsequent segregation of chromosomes into daughter cells. In some variant cell cycles nuclear replication or nuclear division may not be followed by cell division, or G1 and G2 phases may be absent."; "GOC:mah", "ISBN:0815316194", "Reactome:69278" . a owl:Class; rdfs:subClassOf ; "A cell cycle phase during which nuclear division occurs, and which is comprises the phases: prophase, metaphase, anaphase and telophase."; "Wikipedia:M_phase"; "M-phase"; "biological_process"; "GO:0000279"; ; rdfs:comment "Note that this term should not be used for direct annotation. If you are trying to make an annotation to x phase, it is likely that the correct annotation is 'regulation of x/y phase transition' or to a process which occurs during the reported phase (i.e mitotic DNA replication for mitotic S-phase). To capture the phase when a specific location or process is observed, the phase term can be used in an annotation extension (PMID:24885854) applied to a cellular component term (with the relation exists_during) or a biological process term (with the relation happens_during)."; rdfs:label "M phase" . _:68576a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "A cell cycle phase during which nuclear division occurs, and which is comprises the phases: prophase, metaphase, anaphase and telophase."; "GOC:mtg_cell_cycle" . a owl:Class; rdfs:subClassOf ; "The division of a cell nucleus into two nuclei, with DNA and other nuclear contents distributed between the daughter nuclei."; "biological_process"; "karyokinesis"; "GO:0000280"; ; rdfs:label "nuclear division" . _:68577a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "The division of a cell nucleus into two nuclei, with DNA and other nuclear contents distributed between the daughter nuclei."; "GOC:mah" . a owl:Class; owl:equivalentClass _:68578a; rdfs:subClassOf , ; "A developmental process in which a progressive change in the state of some part of an organism, germline or somatic, specifically contributes to its ability to form offspring."; "puberty"; "biological_process"; "reproductive developmental process"; "GO:0003006"; rdfs:label "developmental process involved in reproduction" . _:68578a a owl:Class; owl:intersectionOf _:68579a . _:68579a rdf:first ; rdf:rest _:6857ba . _:6857ba rdf:first _:6857aa; rdf:rest rdf:nil . _:6857aa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6857ca a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "A developmental process in which a progressive change in the state of some part of an organism, germline or somatic, specifically contributes to its ability to form offspring."; "GOC:dph", "GOC:isa_complete" . _:6857da a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "puberty"; "GOC:dph" . _:6857ea a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "reproductive developmental process"; "GOC:dph", "GOC:tb" . a owl:Class; rdfs:subClassOf ; "A molecular process that can be carried out by the action of a single macromolecular machine, usually via direct physical interactions with other molecular entities. Function in this sense denotes an action, or activity, that a gene product (or a complex) performs. These actions are described from two distinct but related perspectives: (1) biochemical activity, and (2) role as a component in a larger system/process."; "molecular process"; "molecular function"; "GO:0003674"; rdfs:comment "Note that, in addition to forming the root of the molecular function ontology, this term is recommended for use for the annotation of gene products whose molecular function is unknown. When this term is used for annotation, it indicates that no information was available about the molecular function of the gene product annotated as of the date the annotation was made; the evidence code 'no data' (ND), is used to indicate this. Despite its name, this is not a type of 'function' in the sense typically defined by upper ontologies such as Basic Formal Ontology (BFO). It is instead a BFO:process carried out by a single gene product or complex."; rdfs:label "molecular_function" . _:6857fa a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "A molecular process that can be carried out by the action of a single macromolecular machine, usually via direct physical interactions with other molecular entities. Function in this sense denotes an action, or activity, that a gene product (or a complex) performs. These actions are described from two distinct but related perspectives: (1) biochemical activity, and (2) role as a component in a larger system/process."; "GOC:pdt" . a owl:Class; rdfs:subClassOf ; rdfs:label "catalytic activity" . a owl:Class; "A location, relative to cellular compartments and structures, occupied by a macromolecular machine when it carries out a molecular function. There are two ways in which the gene ontology describes locations of gene products: (1) relative to cellular structures (e.g., cytoplasmic side of plasma membrane) or compartments (e.g., mitochondrion), and (2) the stable macromolecular complexes of which they are parts (e.g., the ribosome)."; "GO:0008372"; "NIF_Subcellular:sao1337158144"; "cell or subcellular entity", "cellular component"; "cellular_component"; "subcellular entity"; "GO:0005575"; , , , , , ; rdfs:comment "Note that, in addition to forming the root of the cellular component ontology, this term is recommended for use for the annotation of gene products whose cellular component is unknown. When this term is used for annotation, it indicates that no information was available about the cellular component of the gene product annotated as of the date the annotation was made; the evidence code 'no data' (ND), is used to indicate this."; rdfs:label "cellular_component" . _:68580a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "A location, relative to cellular compartments and structures, occupied by a macromolecular machine when it carries out a molecular function. There are two ways in which the gene ontology describes locations of gene products: (1) relative to cellular structures (e.g., cytoplasmic side of plasma membrane) or compartments (e.g., mitochondrion), and (2) the stable macromolecular complexes of which they are parts (e.g., the ribosome)."; "GOC:pdt", "NIF_Subcellular:sao1337158144" . _:68581a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "subcellular entity"; "NIF_Subcellular:nlx_subcell_100315" . a owl:Class; rdfs:subClassOf ; "A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of an organelle within a cell. An organelle is an organized structure of distinctive morphology and function. Includes the nucleus, mitochondria, plastids, vacuoles, vesicles, ribosomes and the cytoskeleton. Excludes the plasma membrane."; "jl"; "2013-12-19T15:25:51Z"; "GO:1902589"; "organelle organisation", "single organism organelle organization"; "biological_process"; "organelle organization and biogenesis", "single-organism organelle organization"; "GO:0006996"; , ; rdfs:label "organelle organization" . _:68582a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of an organelle within a cell. An organelle is an organized structure of distinctive morphology and function. Includes the nucleus, mitochondria, plastids, vacuoles, vesicles, ribosomes and the cytoskeleton. Excludes the plasma membrane."; "GOC:mah" . _:68583a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "single organism organelle organization"; "GOC:TermGenie" . _:68584a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "organelle organization and biogenesis"; "GOC:dph", "GOC:jl", "GOC:mah" . a owl:Class; rdfs:subClassOf ; "The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division."; "Wikipedia:Cell_cycle"; "cell-division cycle"; "biological_process"; "GO:0007049"; , , , , , , ; rdfs:label "cell cycle" . _:68585a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division."; "GOC:go_curators", "GOC:mtg_cell_cycle" . a owl:Class; rdfs:subClassOf , ; "The cell cycle phase which is the first stage of meiosis I and during which chromosomes condense and the two daughter centrioles and their asters migrate toward the poles of the cell."; "biological_process"; "GO:0007128"; ; rdfs:comment "Note that this term should not be used for direct annotation. If you are trying to make an annotation to x phase, it is likely that the correct annotation is 'regulation of x/y phase transition' or to a process which occurs during the reported phase (i.e mitotic DNA replication for mitotic S-phase). To capture the phase when a specific location or process is observed, the phase term can be used in an annotation extension (PMID:24885854) applied to a cellular component term (with the relation exists_during) or a biological process term (with the relation happens_during)."; rdfs:label "meiotic prophase I" . _:68586a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "The cell cycle phase which is the first stage of meiosis I and during which chromosomes condense and the two daughter centrioles and their asters migrate toward the poles of the cell."; "GOC:mtg_cell_cycle" . a owl:Class; rdfs:subClassOf , ; "The cell cycle phase, following prophase I, during which chromosomes become aligned on the equatorial plate of the cell as part of meiosis I."; "biological_process"; "GO:0007132"; ; rdfs:comment "Note that this term should not be used for direct annotation. If you are trying to make an annotation to x phase, it is likely that the correct annotation is 'regulation of x/y phase transition' or to a process which occurs during the reported phase (i.e mitotic DNA replication for mitotic S-phase). To capture the phase when a specific location or process is observed, the phase term can be used in an annotation extension (PMID:24885854) applied to a cellular component term (with the relation exists_during) or a biological process term (with the relation happens_during)."; rdfs:label "meiotic metaphase I" . _:68587a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "The cell cycle phase, following prophase I, during which chromosomes become aligned on the equatorial plate of the cell as part of meiosis I."; "GOC:mtg_cell_cycle" . a owl:Class; rdfs:subClassOf , ; "The cell cycle phase during which chromosomes separate and migrate towards the poles of the spindle the as part of meiosis I."; "biological_process"; "GO:0007133"; ; rdfs:comment "Note that this term should not be used for direct annotation. If you are trying to make an annotation to x phase, it is likely that the correct annotation is 'regulation of x/y phase transition' or to a process which occurs during the reported phase (i.e mitotic DNA replication for mitotic S-phase). To capture the phase when a specific location or process is observed, the phase term can be used in an annotation extension (PMID:24885854) applied to a cellular component term (with the relation exists_during) or a biological process term (with the relation happens_during)."; rdfs:label "meiotic anaphase I" . _:68588a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "The cell cycle phase during which chromosomes separate and migrate towards the poles of the spindle the as part of meiosis I."; "GOC:mtg_cell_cycle" . a owl:Class; rdfs:subClassOf , ; "The cell cycle phase which follows anaphase I of meiosis and during which the chromosomes arrive at the poles of the cell and the division of the cytoplasm starts."; "biological_process"; "GO:0007134"; ; rdfs:comment "Note that this term should not be used for direct annotation. If you are trying to make an annotation to x phase, it is likely that the correct annotation is 'regulation of x/y phase transition' or to a process which occurs during the reported phase (i.e mitotic DNA replication for mitotic S-phase). To capture the phase when a specific location or process is observed, the phase term can be used in an annotation extension (PMID:24885854) applied to a cellular component term (with the relation exists_during) or a biological process term (with the relation happens_during)."; rdfs:label "meiotic telophase I" . _:68589a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "The cell cycle phase which follows anaphase I of meiosis and during which the chromosomes arrive at the poles of the cell and the division of the cytoplasm starts."; "GOC:mtg_cell_cycle" . a owl:Class; rdfs:subClassOf , ; "The cell cycle phase which is the first stage of meiosis II and during which chromosomes condense and the two daughter centrioles and their asters migrate toward the poles of the cell."; "biological_process"; "GO:0007136"; ; rdfs:comment "Note that this term should not be used for direct annotation. If you are trying to make an annotation to x phase, it is likely that the correct annotation is 'regulation of x/y phase transition' or to a process which occurs during the reported phase (i.e mitotic DNA replication for mitotic S-phase). To capture the phase when a specific location or process is observed, the phase term can be used in an annotation extension (PMID:24885854) applied to a cellular component term (with the relation exists_during) or a biological process term (with the relation happens_during)."; rdfs:label "meiotic prophase II" . _:6858aa a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "The cell cycle phase which is the first stage of meiosis II and during which chromosomes condense and the two daughter centrioles and their asters migrate toward the poles of the cell."; "GOC:mtg_cell_cycle" . a owl:Class; rdfs:subClassOf , ; "The cell cycle phase, following prophase II, during which chromosomes become aligned on the equatorial plate of the cell as part of meiosis II."; "biological_process"; "GO:0007137"; ; rdfs:comment "Note that this term should not be used for direct annotation. If you are trying to make an annotation to x phase, it is likely that the correct annotation is 'regulation of x/y phase transition' or to a process which occurs during the reported phase (i.e mitotic DNA replication for mitotic S-phase). To capture the phase when a specific location or process is observed, the phase term can be used in an annotation extension (PMID:24885854) applied to a cellular component term (with the relation exists_during) or a biological process term (with the relation happens_during)."; rdfs:label "meiotic metaphase II" . _:6858ba a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "The cell cycle phase, following prophase II, during which chromosomes become aligned on the equatorial plate of the cell as part of meiosis II."; "GOC:mtg_cell_cycle" . a owl:Class; rdfs:subClassOf , ; "The cell cycle phase during which chromosomes separate and migrate towards the poles of the spindle the as part of meiosis II."; "biological_process"; "GO:0007138"; ; rdfs:comment "Note that this term should not be used for direct annotation. If you are trying to make an annotation to x phase, it is likely that the correct annotation is 'regulation of x/y phase transition' or to a process which occurs during the reported phase (i.e mitotic DNA replication for mitotic S-phase). To capture the phase when a specific location or process is observed, the phase term can be used in an annotation extension (PMID:24885854) applied to a cellular component term (with the relation exists_during) or a biological process term (with the relation happens_during)."; rdfs:label "meiotic anaphase II" . _:6858ca a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "The cell cycle phase during which chromosomes separate and migrate towards the poles of the spindle the as part of meiosis II."; "GOC:mtg_cell_cycle" . a owl:Class; rdfs:subClassOf , ; "The cell cycle phase which follows anaphase II of meiosis and during which the chromosomes arrive at the poles of the cell and the division of the cytoplasm starts."; "biological_process"; "GO:0007139"; ; rdfs:comment "Note that this term should not be used for direct annotation. If you are trying to make an annotation to x phase, it is likely that the correct annotation is 'regulation of x/y phase transition' or to a process which occurs during the reported phase (i.e mitotic DNA replication for mitotic S-phase). To capture the phase when a specific location or process is observed, the phase term can be used in an annotation extension (PMID:24885854) applied to a cellular component term (with the relation exists_during) or a biological process term (with the relation happens_during)."; rdfs:label "meiotic telophase II" . _:6858da a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "The cell cycle phase which follows anaphase II of meiosis and during which the chromosomes arrive at the poles of the cell and the division of the cytoplasm starts."; "GOC:mtg_cell_cycle" . a owl:Class; rdfs:subClassOf ; "A biological process is the execution of a genetically-encoded biological module or program. It consists of all the steps required to achieve the specific biological objective of the module. A biological process is accomplished by a particular set of molecular functions carried out by specific gene products (or macromolecular complexes), often in a highly regulated manner and in a particular temporal sequence.", "A biological process represents a specific objective that the organism is genetically programmed to achieve. Biological processes are often described by their outcome or ending state, e.g., the biological process of cell division results in the creation of two daughter cells (a divided cell) from a single parent cell. A biological process is accomplished by a particular set of molecular functions carried out by specific gene products (or macromolecular complexes), often in a highly regulated manner and in a particular temporal sequence."; "https://github.com/geneontology/go-ontology/issues/24968"^^xsd:anyURI; "jl"; "2012-09-19T15:05:24Z"; "GO:0000004", "GO:0007582", "GO:0044699"; "Wikipedia:Biological_process"; "biological process", "physiological process"; "biological_process"; "single organism process", "single-organism process"; "GO:0008150"; , , , , , , ; rdfs:comment "Note that, in addition to forming the root of the biological process ontology, this term is recommended for use for the annotation of gene products whose biological process is unknown. When this term is used for annotation, it indicates that no information was available about the biological process of the gene product annotated as of the date the annotation was made; the evidence code 'no data' (ND), is used to indicate this."; rdfs:label "biological_process" . _:6858ea a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "A biological process is the execution of a genetically-encoded biological module or program. It consists of all the steps required to achieve the specific biological objective of the module. A biological process is accomplished by a particular set of molecular functions carried out by specific gene products (or macromolecular complexes), often in a highly regulated manner and in a particular temporal sequence."; "GOC:pdt" . _:6858fa a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "A biological process represents a specific objective that the organism is genetically programmed to achieve. Biological processes are often described by their outcome or ending state, e.g., the biological process of cell division results in the creation of two daughter cells (a divided cell) from a single parent cell. A biological process is accomplished by a particular set of molecular functions carried out by specific gene products (or macromolecular complexes), often in a highly regulated manner and in a particular temporal sequence."; "GOC:pdt" . a owl:Class; rdfs:subClassOf ; owl:disjointWith ; "Any process that is carried out at the cellular level, but not necessarily restricted to a single cell. For example, cell communication occurs among more than one cell, but occurs at the cellular level."; "jl"; "2012-12-11T16:56:55Z"; "GO:0008151", "GO:0044763", "GO:0050875"; "cell physiology", "cellular physiological process"; "cell growth and/or maintenance"; "biological_process"; "single-organism cellular process"; "GO:0009987"; , ; rdfs:comment "This term should not be used for direct annotation. It should be possible to make a more specific annotation to one of the children of this term."; rdfs:label "cellular process" . _:68590a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Any process that is carried out at the cellular level, but not necessarily restricted to a single cell. For example, cell communication occurs among more than one cell, but occurs at the cellular level."; "GOC:go_curators", "GOC:isa_complete" . a owl:Class; rdfs:subClassOf ; "A process that results in the assembly, arrangement of constituent parts, or disassembly of a cellular component."; "GO:0044235", "GO:0071842"; "cell organisation", "cellular component organisation at cellular level", "cellular component organisation in other organism", "cellular component organization at cellular level", "cellular component organization in other organism"; "biological_process"; "cell organization and biogenesis"; "GO:0016043"; , , , ; rdfs:label "cellular component organization" . _:68591a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "A process that results in the assembly, arrangement of constituent parts, or disassembly of a cellular component."; "GOC:ai", "GOC:jl", "GOC:mah" . _:68592a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "cellular component organisation at cellular level"; "GOC:mah" . _:68593a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "cellular component organisation in other organism"; "GOC:mah" . _:68594a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "cell organization and biogenesis"; "GOC:mah" . a owl:Class; rdfs:subClassOf , _:68595a; "Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule."; "Reactome:R-HSA-6788855", "Reactome:R-HSA-6788867"; "phosphokinase activity"; "GO:0016301"; rdfs:comment "Note that this term encompasses all activities that transfer a single phosphate group; although ATP is by far the most common phosphate donor, reactions using other phosphate donors are included in this term."; rdfs:label "kinase activity" . _:68595a a owl:Restriction; owl:onProperty ; owl:hasSelf true . _:68596a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule."; "ISBN:0198506732" . _:68597a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Reactome:R-HSA-6788855"; rdfs:label "FN3KRP phosphorylates PsiAm, RibAm" . _:68598a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Reactome:R-HSA-6788867"; rdfs:label "FN3K phosphorylates ketosamines" . a owl:Class; rdfs:subClassOf ; rdfs:label "transferase activity" . a owl:Class; rdfs:subClassOf ; rdfs:label "transferase activity, transferring phosphorus-containing groups" . a owl:Class; rdfs:subClassOf ; "A type of reproduction that combines the genetic material of two gametes (such as a sperm or egg cell or fungal spores). The gametes have an haploid genome (with a single set of chromosomes, the product of a meiotic division) and combines with one another to produce a zygote (diploid)."; "https://github.com/geneontology/go-ontology/issues/22929"^^xsd:anyURI; "Wikipedia:Sexual_reproduction"; "biological_process"; "GO:0019953"; rdfs:comment "Note that gametes may come from two organisms or from a single organism in the case of self-fertilizing hermaphrodites, e.g. C. elegans, or self-fertilization in plants. Note also that sexual reproduction may be seen as the regular alternation, in the life cycle of haplontic, diplontic and diplohaplontic organisms, of meiosis and fertilization which provides for the production offspring. In diplontic organisms there is a life cycle in which the products of meiosis behave directly as gametes, fusing to form a zygote from which the diploid, or sexually reproductive polyploid, adult organism will develop. In diplohaplontic organisms a haploid phase (gametophyte) exists in the life cycle between meiosis and fertilization (e.g. higher plants, many algae and Fungi); the products of meiosis are spores that develop as haploid individuals from which haploid gametes develop to form a diploid zygote; diplohaplontic organisms show an alternation of haploid and diploid generations. In haplontic organisms meiosis occurs in the zygote, giving rise to four haploid cells (e.g. many algae and protozoa), only the zygote is diploid and this may form a resistant spore, tiding organisms over hard times."; rdfs:label "sexual reproduction" . _:68599a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "A type of reproduction that combines the genetic material of two gametes (such as a sperm or egg cell or fungal spores). The gametes have an haploid genome (with a single set of chromosomes, the product of a meiotic division) and combines with one another to produce a zygote (diploid)."; "Wikipedia:Sexual_reproduction" . a owl:Class; owl:equivalentClass _:6859aa; rdfs:subClassOf , _:6859ea; "The cellular process that ensures successive accurate and complete genome replication and chromosome segregation."; "biological_process"; "GO:0022402"; ; rdfs:label "cell cycle process" . _:6859aa a owl:Class; owl:intersectionOf _:6859ba . _:6859ba rdf:first ; rdf:rest _:6859da . _:6859da rdf:first _:6859ca; rdf:rest rdf:nil . _:6859ca a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6859ea a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6859fa a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "The cellular process that ensures successive accurate and complete genome replication and chromosome segregation."; "GOC:isa_complete", "GOC:mtg_cell_cycle" . a owl:Class; rdfs:subClassOf ; "One of the distinct periods or stages into which the cell cycle is divided. Each phase is characterized by the occurrence of specific biochemical and morphological events."; "biological_process"; "GO:0022403"; ; rdfs:comment "Note that this term should not be used for direct annotation. If you are trying to make an annotation to x phase, it is likely that the correct annotation is 'regulation of x/y phase transition' or to a process which occurs during the reported phase (i.e mitotic DNA replication for mitotic S-phase). To capture the phase when a specific location or process is observed, the phase term can be used in an annotation extension (PMID:24885854) applied to a cellular component term (with the relation exists_during) or a biological process term (with the relation happens_during)."; rdfs:label "cell cycle phase" . _:685a0a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "One of the distinct periods or stages into which the cell cycle is divided. Each phase is characterized by the occurrence of specific biochemical and morphological events."; "GOC:mtg_cell_cycle" . a owl:Class; owl:equivalentClass _:685a1a; rdfs:subClassOf , _:685a5a; owl:disjointWith ; "A biological process that directly contributes to the process of producing new individuals by one or two organisms. The new individuals inherit some proportion of their genetic material from the parent or parents."; "jl"; "2012-09-19T15:56:06Z"; "GO:0044702"; "biological_process"; "single organism reproductive process"; "GO:0022414"; ; rdfs:label "reproductive process" . _:685a1a a owl:Class; owl:intersectionOf _:685a2a . _:685a2a rdf:first ; rdf:rest _:685a4a . _:685a4a rdf:first _:685a3a; rdf:rest rdf:nil . _:685a3a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:685a5a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:685a6a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "A biological process that directly contributes to the process of producing new individuals by one or two organisms. The new individuals inherit some proportion of their genetic material from the parent or parents."; "GOC:dph", "GOC:isa_complete" . a owl:Class; rdfs:subClassOf ; owl:disjointWith ; "A biological process whose specific outcome is the progression of an integrated living unit: an anatomical structure (which may be a subcellular structure, cell, tissue, or organ), or organism over time from an initial condition to a later condition."; "jl"; "2012-12-19T12:21:31Z"; "GO:0044767"; "development"; "biological_process"; "single-organism developmental process"; "GO:0032502"; , , ; rdfs:label "developmental process" . _:685a7a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "A biological process whose specific outcome is the progression of an integrated living unit: an anatomical structure (which may be a subcellular structure, cell, tissue, or organ), or organism over time from an initial condition to a later condition."; "GOC:isa_complete" . a owl:Class; rdfs:subClassOf ; "The accumulation of pigment in an organism, tissue or cell, either by increased deposition or by increased number of cells."; "biological_process"; "GO:0043473"; , ; rdfs:label "pigmentation" . _:685a8a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "The accumulation of pigment in an organism, tissue or cell, either by increased deposition or by increased number of cells."; "GOC:jl" . a owl:Class; rdfs:subClassOf ; owl:disjointWith ; "A distinct period or stage in a biological process or cycle."; "jl"; "2014-07-16T13:12:40Z"; "biological_process"; "GO:0044848"; ; rdfs:comment "Note that phases are is_a disjoint from other biological processes. happens_during relationships can operate between phases and other biological processes e.g. DNA replication happens_during S phase."; rdfs:label "biological phase" . _:685a9a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "A distinct period or stage in a biological process or cycle."; "GOC:jl" . a owl:Class; rdfs:subClassOf ; "The creation of two or more organelles by division of one organelle."; "biological_process"; "GO:0048285"; , ; rdfs:label "organelle fission" . _:685aaa a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "The creation of two or more organelles by division of one organelle."; "GOC:jid" . a owl:Class; rdfs:subClassOf ; "The biological process whose specific outcome is the progression of an anatomical structure from an initial condition to its mature state. This process begins with the formation of the structure and ends with the mature structure, whatever form that may be including its natural destruction. An anatomical structure is any biological entity that occupies space and is distinguished from its surroundings. Anatomical structures can be macroscopic such as a carpel, or microscopic such as an acrosome."; "development of an anatomical structure"; "biological_process"; "GO:0048856"; , , ; rdfs:label "anatomical structure development" . _:685aba a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "The biological process whose specific outcome is the progression of an anatomical structure from an initial condition to its mature state. This process begins with the formation of the structure and ends with the mature structure, whatever form that may be including its natural destruction. An anatomical structure is any biological entity that occupies space and is distinguished from its surroundings. Anatomical structures can be macroscopic such as a carpel, or microscopic such as an acrosome."; "GO_REF:0000021" . a owl:Class; rdfs:subClassOf ; "The process resulting in division and partitioning of components of a cell to form more cells; may or may not be accompanied by the physical separation of a cell into distinct, individually membrane-bounded daughter cells."; "Wikipedia:Cell_division"; "biological_process"; "GO:0051301"; , , ; rdfs:comment "Note that this term differs from 'cytokinesis ; GO:0000910' in that cytokinesis does not include nuclear division."; rdfs:label "cell division" . _:685aca a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "The process resulting in division and partitioning of components of a cell to form more cells; may or may not be accompanied by the physical separation of a cell into distinct, individually membrane-bounded daughter cells."; "GOC:di", "GOC:go_curators", "GOC:pr" . a owl:Class; rdfs:subClassOf , _:685ada; "The cell cycle 'gap' phase which is the interval between the completion of DNA segregation (usually by mitosis or meiosis) and the beginning of DNA synthesis."; "Wikipedia:G1_phase"; "biological_process"; "GO:0051318"; ; rdfs:comment "Note that this term should not be used for direct annotation. If you are trying to make an annotation to x phase, it is likely that the correct annotation is 'regulation of x/y phase transition' or to a process which occurs during the reported phase (i.e mitotic DNA replication for mitotic S-phase). To capture the phase when a specific location or process is observed, the phase term can be used in an annotation extension (PMID:24885854) applied to a cellular component term (with the relation exists_during) or a biological process term (with the relation happens_during)."; rdfs:label "G1 phase" . _:685ada a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:685aea a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "The cell cycle 'gap' phase which is the interval between the completion of DNA segregation (usually by mitosis or meiosis) and the beginning of DNA synthesis."; "GOC:mtg_cell_cycle" . a owl:Class; rdfs:subClassOf , _:685afa; "The cell cycle 'gap' phase which is the interval between the completion of DNA synthesis and the beginning of DNA segregation (usually by mitosis or meiosis)."; "Wikipedia:G2_phase"; "biological_process"; "GO:0051319"; ; rdfs:comment "Note that this term should not be used for direct annotation. If you are trying to make an annotation to x phase, it is likely that the correct annotation is 'regulation of x/y phase transition' or to a process which occurs during the reported phase (i.e mitotic DNA replication for mitotic S-phase). To capture the phase when a specific location or process is observed, the phase term can be used in an annotation extension (PMID:24885854) applied to a cellular component term (with the relation exists_during) or a biological process term (with the relation happens_during)."; rdfs:label "G2 phase" . _:685afa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:685b0a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "The cell cycle 'gap' phase which is the interval between the completion of DNA synthesis and the beginning of DNA segregation (usually by mitosis or meiosis)."; "GOC:mtg_cell_cycle" . a owl:Class; rdfs:subClassOf , _:685b1a; "The cell cycle phase, following G1, during which DNA synthesis takes place."; "Wikipedia:S_phase"; "S-phase"; "biological_process"; "GO:0051320"; ; rdfs:comment "Note that this term should not be used for direct annotation. If you are trying to make an annotation to x phase, it is likely that the correct annotation is 'regulation of x/y phase transition' or to a process which occurs during the reported phase (i.e mitotic DNA replication for mitotic S-phase). To capture the phase when a specific location or process is observed, the phase term can be used in an annotation extension (PMID:24885854) applied to a cellular component term (with the relation exists_during) or a biological process term (with the relation happens_during)."; rdfs:label "S phase" . _:685b1a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:685b2a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "The cell cycle phase, following G1, during which DNA synthesis takes place."; "GOC:mtg_cell_cycle" . a owl:Class; owl:equivalentClass _:685b3a; rdfs:subClassOf , , _:685b7a, _:685b8a; "Progression through the phases of the meiotic cell cycle, in which canonically a cell replicates to produce four offspring with half the chromosomal content of the progenitor cell via two nuclear divisions."; "https://github.com/geneontology/go-ontology/issues/24599"^^xsd:anyURI; "GO:0007126"; "Wikipedia:Meiosis"; "biological_process"; "meiosis"; "GO:0051321"; , ; rdfs:comment "Note that this term should not be confused with 'GO:0140013 ; meiotic nuclear division'. 'GO:0051321 ; meiotic cell cycle represents the entire mitotic cell cycle, while 'GO:0140013 meiotic nuclear division' specifically represents the actual nuclear division step of the mitotic cell cycle."; rdfs:label "meiotic cell cycle" . _:685b3a a owl:Class; owl:intersectionOf _:685b4a . _:685b4a rdf:first ; rdf:rest _:685b6a . _:685b6a rdf:first _:685b5a; rdf:rest rdf:nil . _:685b5a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:685b7a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:685b8a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:685b9a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Progression through the phases of the meiotic cell cycle, in which canonically a cell replicates to produce four offspring with half the chromosomal content of the progenitor cell via two nuclear divisions."; "GOC:ai" . a owl:Class; rdfs:subClassOf , _:685baa; "The cell cycle phase, following metaphase, during which the chromosomes separate and migrate towards the poles of the spindle."; "Wikipedia:Anaphase"; "biological_process"; "GO:0051322"; ; rdfs:comment "Note that this term should not be used for direct annotation. If you are trying to make an annotation to x phase, it is likely that the correct annotation is 'regulation of x/y phase transition' or to a process which occurs during the reported phase (i.e mitotic DNA replication for mitotic S-phase). To capture the phase when a specific location or process is observed, the phase term can be used in an annotation extension (PMID:24885854) applied to a cellular component term (with the relation exists_during) or a biological process term (with the relation happens_during)."; rdfs:label "anaphase" . _:685baa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:685bba a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "The cell cycle phase, following metaphase, during which the chromosomes separate and migrate towards the poles of the spindle."; "GOC:mtg_cell_cycle" . a owl:Class; rdfs:subClassOf , _:685bca; "The cell cycle phase, following prophase or prometaphase in higher eukaryotes, during which chromosomes become aligned on the equatorial plate of the cell."; "Wikipedia:Metaphase"; "biological_process"; "GO:0051323"; ; rdfs:comment "Note that this term should not be used for direct annotation. If you are trying to make an annotation to x phase, it is likely that the correct annotation is 'regulation of x/y phase transition' or to a process which occurs during the reported phase (i.e mitotic DNA replication for mitotic S-phase). To capture the phase when a specific location or process is observed, the phase term can be used in an annotation extension (PMID:24885854) applied to a cellular component term (with the relation exists_during) or a biological process term (with the relation happens_during)."; rdfs:label "metaphase" . _:685bca a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:685bda a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "The cell cycle phase, following prophase or prometaphase in higher eukaryotes, during which chromosomes become aligned on the equatorial plate of the cell."; "GOC:mtg_cell_cycle" . a owl:Class; rdfs:subClassOf , _:685bea; "The cell cycle phase which is the first stage of M phase of meiosis and mitosis and during which chromosomes condense and the two daughter centrioles and their asters migrate toward the poles of the cell."; "Wikipedia:Prophase"; "biological_process"; "GO:0051324"; ; rdfs:comment "Note that this term should not be used for direct annotation. If you are trying to make an annotation to x phase, it is likely that the correct annotation is 'regulation of x/y phase transition' or to a process which occurs during the reported phase (i.e mitotic DNA replication for mitotic S-phase). To capture the phase when a specific location or process is observed, the phase term can be used in an annotation extension (PMID:24885854) applied to a cellular component term (with the relation exists_during) or a biological process term (with the relation happens_during)."; rdfs:label "prophase" . _:685bea a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:685bfa a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "The cell cycle phase which is the first stage of M phase of meiosis and mitosis and during which chromosomes condense and the two daughter centrioles and their asters migrate toward the poles of the cell."; "GOC:mtg_cell_cycle" . a owl:Class; rdfs:subClassOf ; "The cell cycle phase following cytokinesis which begins with G1 phase, proceeds through S phase and G2 phase and ends when prophase of meiosis or mitosis begins. During interphase the cell readies itself for meiosis or mitosis and the replication of its DNA occurs."; "resting phase"; "Wikipedia:Interphase"; "karyostasis"; "biological_process"; "GO:0051325"; ; rdfs:comment "Note that this term should not be used for direct annotation. If you are trying to make an annotation to x phase, it is likely that the correct annotation is 'regulation of x/y phase transition' or to a process which occurs during the reported phase (i.e mitotic DNA replication for mitotic S-phase). To capture the phase when a specific location or process is observed, the phase term can be used in an annotation extension (PMID:24885854) applied to a cellular component term (with the relation exists_during) or a biological process term (with the relation happens_during)."; rdfs:label "interphase" . _:685c0a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "The cell cycle phase following cytokinesis which begins with G1 phase, proceeds through S phase and G2 phase and ends when prophase of meiosis or mitosis begins. During interphase the cell readies itself for meiosis or mitosis and the replication of its DNA occurs."; "GOC:mtg_cell_cycle" . a owl:Class; rdfs:subClassOf , _:685c1a; "The cell cycle phase which follows anaphase during M phase of mitosis and meiosis and during which the chromosomes arrive at the poles of the cell and the division of the cytoplasm starts."; "Wikipedia:Telophase"; "biological_process"; "GO:0051326"; ; rdfs:comment "note that this term should not be used for direct annotation. if you are trying to make an annotation to x phase, it is likely that the correct annotation is 'regulation of x/y phase transition' or to a process which occurs during the reported phase (i.e mitotic DNA replication for mitotic s-phase). to capture the phase when a specific location or process is observed, the phase term can be used in an annotation extension (PMID:24885854) applied to a cellular component term (with the relation exists_during) or a biological process term (with the relation happens_during)."; rdfs:label "telophase" . _:685c1a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:685c2a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "The cell cycle phase which follows anaphase during M phase of mitosis and meiosis and during which the chromosomes arrive at the poles of the cell and the division of the cytoplasm starts."; "GOC:mtg_cell_cycle" . a owl:Class; owl:equivalentClass _:685c3a; rdfs:subClassOf , ; "A cell cycle phase during which nuclear division occurs, and which is comprises the phases: prophase, metaphase, anaphase and telophase and occurs as part of a meiotic cell cycle."; "M phase of meiotic cell cycle"; "biological_process"; "GO:0051327"; ; rdfs:comment "Note that this term should not be used for direct annotation. If you are trying to make an annotation to x phase, it is likely that the correct annotation is 'regulation of x/y phase transition' or to a process which occurs during the reported phase (i.e mitotic DNA replication for mitotic S-phase). To capture the phase when a specific location or process is observed, the phase term can be used in an annotation extension (PMID:24885854) applied to a cellular component term (with the relation exists_during) or a biological process term (with the relation happens_during)."; rdfs:label "meiotic M phase" . _:685c3a a owl:Class; owl:intersectionOf _:685c4a . _:685c4a rdf:first ; rdf:rest _:685c6a . _:685c6a rdf:first _:685c5a; rdf:rest rdf:nil . _:685c5a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:685c7a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "A cell cycle phase during which nuclear division occurs, and which is comprises the phases: prophase, metaphase, anaphase and telophase and occurs as part of a meiotic cell cycle."; "GOC:mtg_cell_cycle" . a owl:Class; owl:equivalentClass _:685c8a; rdfs:subClassOf , ; "The cell cycle phase which begins after cytokinesis and ends when meiotic prophase begins. Meiotic cells have an interphase after each meiotic division, but only interphase I involves replication of the cell's DNA."; "interphase of meiotic cell cycle"; "biological_process"; "GO:0051328"; ; rdfs:comment "Note that this term should not be used for direct annotation. If you are trying to make an annotation to x phase, it is likely that the correct annotation is 'regulation of x/y phase transition' or to a process which occurs during the reported phase (i.e mitotic DNA replication for mitotic S-phase). To capture the phase when a specific location or process is observed, the phase term can be used in an annotation extension (PMID:24885854) applied to a cellular component term (with the relation exists_during) or a biological process term (with the relation happens_during)."; rdfs:label "meiotic interphase" . _:685c8a a owl:Class; owl:intersectionOf _:685c9a . _:685c9a rdf:first ; rdf:rest _:685cba . _:685cba rdf:first _:685caa; rdf:rest rdf:nil . _:685caa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:685cca a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "The cell cycle phase which begins after cytokinesis and ends when meiotic prophase begins. Meiotic cells have an interphase after each meiotic division, but only interphase I involves replication of the cell's DNA."; "GOC:mtg_cell_cycle" . a owl:Class; owl:equivalentClass _:685cda; rdfs:subClassOf , ; "The cell cycle phase following cytokinesis which begins with G1 phase, proceeds through S phase and G2 phase and ends when mitotic prophase begins. During interphase the cell readies itself for mitosis and the replication of its DNA occurs."; "interphase of mitotic cell cycle"; "biological_process"; "GO:0051329"; ; rdfs:comment "Note that this term should not be used for direct annotation. If you are trying to make an annotation to x phase, it is likely that the correct annotation is 'regulation of x/y phase transition' or to a process which occurs during the reported phase (i.e mitotic DNA replication for mitotic S-phase). To capture the phase when a specific location or process is observed, the phase term can be used in an annotation extension (PMID:24885854) applied to a cellular component term (with the relation exists_during) or a biological process term (with the relation happens_during)."; rdfs:label "mitotic interphase" . _:685cda a owl:Class; owl:intersectionOf _:685cea . _:685cea rdf:first ; rdf:rest _:685d0a . _:685d0a rdf:first _:685cfa; rdf:rest rdf:nil . _:685cfa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:685d1a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "The cell cycle phase following cytokinesis which begins with G1 phase, proceeds through S phase and G2 phase and ends when mitotic prophase begins. During interphase the cell readies itself for mitosis and the replication of its DNA occurs."; "GOC:mtg_cell_cycle" . a owl:Class; rdfs:subClassOf , _:685d2a; "The cell cycle 'gap' phase which is the interval between the completion of DNA segregation by meiosis and the beginning of DNA synthesis."; "G1 phase of meiotic cell cycle"; "biological_process"; "GO:0051330"; ; rdfs:comment "Note that this term should not be used for direct annotation. If you are trying to make an annotation to x phase, it is likely that the correct annotation is 'regulation of x/y phase transition' or to a process which occurs during the reported phase (i.e mitotic DNA replication for mitotic S-phase). To capture the phase when a specific location or process is observed, the phase term can be used in an annotation extension (PMID:24885854) applied to a cellular component term (with the relation exists_during) or a biological process term (with the relation happens_during)."; rdfs:label "meiotic G1 phase" . _:685d2a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:685d3a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "The cell cycle 'gap' phase which is the interval between the completion of DNA segregation by meiosis and the beginning of DNA synthesis."; "GOC:mtg_cell_cycle" . a owl:Class; rdfs:subClassOf , _:685d4a; "The cell cycle 'gap' phase which is the interval between the completion of DNA synthesis and the beginning of DNA segregation by meiosis."; "G2 phase of meiotic cell cycle"; "biological_process"; "GO:0051331"; ; rdfs:comment "Note that this term should not be used for direct annotation. If you are trying to make an annotation to x phase, it is likely that the correct annotation is 'regulation of x/y phase transition' or to a process which occurs during the reported phase (i.e mitotic DNA replication for mitotic S-phase). To capture the phase when a specific location or process is observed, the phase term can be used in an annotation extension (PMID:24885854) applied to a cellular component term (with the relation exists_during) or a biological process term (with the relation happens_during)."; rdfs:label "meiotic G2 phase" . _:685d4a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:685d5a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "The cell cycle 'gap' phase which is the interval between the completion of DNA synthesis and the beginning of DNA segregation by meiosis."; "GOC:mtg_cell_cycle" . a owl:Class; rdfs:subClassOf , _:685d6a; "The cell cycle phase, following G1, during which DNA synthesis takes place as part of a meiotic cell cycle."; "S phase of meiotic cell cycle", "S-phase of meiotic cell cycle", "premeiotic S-phase"; "biological_process"; "GO:0051332"; ; rdfs:comment "Note that this term should not be used for direct annotation. If you are trying to make an annotation to x phase, it is likely that the correct annotation is 'regulation of x/y phase transition' or to a process which occurs during the reported phase (i.e mitotic DNA replication for mitotic S-phase). To capture the phase when a specific location or process is observed, the phase term can be used in an annotation extension (PMID:24885854) applied to a cellular component term (with the relation exists_during) or a biological process term (with the relation happens_during)."; rdfs:label "meiotic S phase" . _:685d6a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:685d7a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "The cell cycle phase, following G1, during which DNA synthesis takes place as part of a meiotic cell cycle."; "GOC:mtg_cell_cycle" . a owl:Class; rdfs:subClassOf ; "A process that results in the biosynthesis of constituent macromolecules, assembly, arrangement of constituent parts, or disassembly of a cellular component."; "mah"; "2010-09-10T01:39:16Z"; "GO:0071841"; "cellular component organisation or biogenesis", "cellular component organisation or biogenesis at cellular level", "cellular component organization or biogenesis at cellular level"; "biological_process"; "GO:0071840"; , ; rdfs:label "cellular component organization or biogenesis" . _:685d8a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "A process that results in the biosynthesis of constituent macromolecules, assembly, arrangement of constituent parts, or disassembly of a cellular component."; "GOC:mah" . _:685d9a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "cellular component organisation or biogenesis"; "GOC:mah" . _:685daa a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "cellular component organisation or biogenesis at cellular level"; "GOC:mah" . a owl:Class; owl:equivalentClass _:685dba; rdfs:subClassOf , _:685dfa; "One of the distinct periods or stages into which the meiotic cell cycle is divided. Each phase is characterized by the occurrence of specific biochemical and morphological events."; "biological_process"; "GO:0098762"; ; rdfs:comment "This term should not be used for direct annotation. If you are trying to make an annotation to x phase, it is likely that the correct annotation should be to 'regulation of x/y phase transition' or to a process which occurs during the reported phase (e.g. mitotic DNA replication for mitotic S-phase). To capture the phase when a specific location or process is observed, the phase term can be used in an annotation extension (PMID:24885854) applied to a cellular component term (with the relation exists_during) or a biological process term (with the relation happens_during)."; rdfs:label "meiotic cell cycle phase" . _:685dba a owl:Class; owl:intersectionOf _:685dca . _:685dca rdf:first ; rdf:rest _:685dea . _:685dea rdf:first _:685dda; rdf:rest rdf:nil . _:685dda a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:685dfa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:685e0a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "One of the distinct periods or stages into which the meiotic cell cycle is divided. Each phase is characterized by the occurrence of specific biochemical and morphological events."; "GOC:dos" . a owl:Class; owl:equivalentClass _:685e1a; rdfs:subClassOf , _:685e5a; "One of the distinct periods or stages into which the mitotic cell cycle is divided. Each phase is characterized by the occurrence of specific biochemical and morphological events."; "biological_process"; "GO:0098763"; ; rdfs:comment "This term should not be used for direct annotation. If you are trying to make an annotation to x phase, it is likely that the correct annotation should be to 'regulation of x/y phase transition' or to a process which occurs during the reported phase (e.g. mitotic DNA replication for mitotic S-phase). To capture the phase when a specific location or process is observed, the phase term can be used in an annotation extension (PMID:24885854) applied to a cellular component term (with the relation exists_during) or a biological process term (with the relation happens_during)."; rdfs:label "mitotic cell cycle phase" . _:685e1a a owl:Class; owl:intersectionOf _:685e2a . _:685e2a rdf:first ; rdf:rest _:685e4a . _:685e4a rdf:first _:685e3a; rdf:rest rdf:nil . _:685e3a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:685e5a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:685e6a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "One of the distinct periods or stages into which the mitotic cell cycle is divided. Each phase is characterized by the occurrence of specific biochemical and morphological events."; "GOC:dos" . a owl:Class; rdfs:subClassOf ; "A meiotic cell cycle phase prior to a during which some part of meiosis I nuclear division or the proceeding cytokinesis occurs."; "biological_process"; "GO:0098764"; ; rdfs:comment "Note that this term should not be used for direct annotation. If you are trying to make an annotation to x phase, it is likely that the correct annotation is 'regulation of x/y phase transition' or to a process which occurs during the reported phase (i.e mitotic DNA replication for mitotic S-phase). To capture the phase when a specific location or process is observed, the phase term can be used in an annotation extension (PMID:24885854) applied to a cellular component term (with the relation exists_during) or a biological process term (with the relation happens_during)."; rdfs:label "meiosis I cell cycle phase" . _:685e7a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "A meiotic cell cycle phase prior to a during which some part of meiosis I nuclear division or the proceeding cytokinesis occurs."; "GOC:dos" . a owl:Class; rdfs:subClassOf ; "A meiotic cell cycle phase that occurs after meiosis I (the first meiotic nuclear division)."; "biological_process"; "GO:0098765"; ; rdfs:comment "This term should not be used for direct annotation. If you are trying to make an annotation to x phase, it is likely that the correct annotation should be to 'regulation of x/y phase transition' or to a process which occurs during the reported phase (e.g. mitotic DNA replication for mitotic S-phase). To capture the phase when a specific location or process is observed, the phase term can be used in an annotation extension (PMID:24885854) applied to a cellular component term (with the relation exists_during) or a biological process term (with the relation happens_during)."; rdfs:label "meiosis II cell cycle phase" . _:685e8a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "A meiotic cell cycle phase that occurs after meiosis I (the first meiotic nuclear division)."; "GOC:dos" . a owl:Class; owl:equivalentClass _:685e9a; rdfs:subClassOf , ; "One of the two nuclear divisions that occur as part of the meiotic cell cycle."; "https://github.com/geneontology/go-ontology/issues/19910"^^xsd:anyURI; "pg"; "2017-03-23T09:40:00Z"; "meiosis"; "biological_process"; "GO:0140013"; ; rdfs:label "meiotic nuclear division" . _:685e9a a owl:Class; owl:intersectionOf _:685eaa . _:685eaa rdf:first ; rdf:rest _:685eca . _:685eca rdf:first _:685eba; rdf:rest rdf:nil . _:685eba a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:685eda a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "One of the two nuclear divisions that occur as part of the meiotic cell cycle."; "PMID:9334324" . a owl:Class; owl:equivalentClass _:685eea; rdfs:subClassOf , ; "A mitotic cell cycle process comprising the steps by which the nucleus of a eukaryotic cell divides; the process involves condensation of chromosomal DNA into a highly compacted form. Canonically, mitosis produces two daughter nuclei whose chromosome complement is identical to that of the mother cell."; "https://github.com/geneontology/go-ontology/issues/19910"^^xsd:anyURI; "pg"; "2017-03-23T14:44:23Z"; "mitosis"; "biological_process"; "GO:0140014"; , ; rdfs:label "mitotic nuclear division" . _:685eea a owl:Class; owl:intersectionOf _:685efa . _:685efa rdf:first ; rdf:rest _:685f1a . _:685f1a rdf:first _:685f0a; rdf:rest rdf:nil . _:685f0a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:685f2a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "A mitotic cell cycle process comprising the steps by which the nucleus of a eukaryotic cell divides; the process involves condensation of chromosomal DNA into a highly compacted form. Canonically, mitosis produces two daughter nuclei whose chromosome complement is identical to that of the mother cell."; "ISBN:0198547684" . a owl:Class; owl:equivalentClass _:685f3a; rdfs:subClassOf , , _:685f7a; owl:disjointWith ; "A process that is part of the meiotic cell cycle."; "jl"; "2014-05-22T14:22:28Z"; "biological_process"; "GO:1903046"; , ; rdfs:label "meiotic cell cycle process" . _:685f3a a owl:Class; owl:intersectionOf _:685f4a . _:685f4a rdf:first ; rdf:rest _:685f6a . _:685f6a rdf:first _:685f5a; rdf:rest rdf:nil . _:685f5a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:685f7a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:685f8a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "A process that is part of the meiotic cell cycle."; "GOC:TermGenie", "GOC:mtg_cell_cycle", "GO_REF:0000060" . a owl:Class; owl:equivalentClass _:685f9a; rdfs:subClassOf , _:685fda; "A process that is part of the mitotic cell cycle."; "jl"; "2014-05-22T14:22:34Z"; "biological_process"; "GO:1903047"; ; rdfs:label "mitotic cell cycle process" . _:685f9a a owl:Class; owl:intersectionOf _:685faa . _:685faa rdf:first ; rdf:rest _:685fca . _:685fca rdf:first _:685fba; rdf:rest rdf:nil . _:685fba a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:685fda a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:685fea a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "A process that is part of the mitotic cell cycle."; "GOC:TermGenie", "GOC:mtg_cell_cycle", "GO_REF:0000060" . a owl:Class; rdfs:subClassOf ; "data item"@en; "Data items include counts of things, analyte concentrations, and statistical summaries."@en; ; "An information content entity that is intended to be a truthful statement about something (modulo, e.g., measurement precision or other systematic errors) and is constructed/acquired by a method which reliably tends to produce (approximately) truthful statements."@en; "2/2/2009 Alan and Bjoern discussing FACS run output data. This is a data item because it is about the cell population. Each element records an event and is typically further composed a set of measurment data items that record the fluorescent intensity stimulated by one of the lasers."@en, "2009-03-16: data item deliberatly ambiguous: we merged data set and datum to be one entity, not knowing how to define singular versus plural. So data item is more general than datum."@en, "2009-03-16: removed datum as alternative term as datum specifically refers to singular form, and is thus not an exact synonym."@en, "2014-03-31: See discussion at http://odontomachus.wordpress.com/2014/03/30/aboutness-objects-propositions/", """JAR: datum -- well, this will be very tricky to define, but maybe some information-like stuff that might be put into a computer and that is meant, by someone, to denote and/or to be interpreted by some process... I would include lists, tables, sentences... I think I might defer to Barry, or to Brian Cantwell Smith JAR: A data item is an approximately justified approximately true approximate belief"""@en; "PERSON: Alan Ruttenberg"@en, "PERSON: Chris Stoeckert"@en, "PERSON: Jonathan Rees"@en; "data"@en; rdfs:label "data item"@en . a owl:Class; rdfs:subClassOf ; "symbol"@en; "a serial number such as \"12324X\""@en, "a stop sign"@en, "a written proper name such as \"OBI\""@en; ; "An information content entity that is a mark(s) or character(s) used as a conventional representation of another entity."@en; "20091104, MC: this needs work and will most probably change"@en, "2014-03-31: We would like to have a deeper analysis of 'mark' and 'sign' in the future (see https://github.com/information-artifact-ontology/IAO/issues/154)."@en; "PERSON: James A. Overton"@en, "PERSON: Jonathan Rees"@en; "based on Oxford English Dictionary"@en; rdfs:label "symbol"@en . a owl:Class; rdfs:subClassOf , _:685ffa; "information content entity"@en; "Examples of information content entites include journal articles, data, graphical layouts, and graphs."@en; ; "A generically dependent continuant that is about some thing."@en; "2014-03-10: The use of \"thing\" is intended to be general enough to include universals and configurations (see https://groups.google.com/d/msg/information-ontology/GBxvYZCk1oc/-L6B5fSBBTQJ)."@en, """information_content_entity 'is_encoded_in' some digital_entity in obi before split (040907). information_content_entity 'is_encoded_in' some physical_document in obi before split (040907). Previous. An information content entity is a non-realizable information entity that 'is encoded in' some digital or physical entity."""@en; "PERSON: Chris Stoeckert"@en; "OBI_0000142"@en; rdfs:label "information content entity"@en . _:685ffa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; owl:equivalentClass _:68600a; rdfs:subClassOf ; "curation status specification"@en; ; "The curation status of the term. The allowed values come from an enumerated list of predefined terms. See the specification of these instances for more detailed definitions of each enumerated value."@en; "Better to represent curation as a process with parts and then relate labels to that process (in IAO meeting)"@en; "PERSON:Bill Bug"@en; "GROUP:OBI:"@en, "OBI_0000266"@en; rdfs:label "curation status specification"@en . _:68600a a owl:Class; owl:oneOf _:68601a . _:68601a rdf:first ; rdf:rest _:68602a . _:68602a rdf:first ; rdf:rest _:68603a . _:68603a rdf:first ; rdf:rest _:68604a . _:68604a rdf:first ; rdf:rest _:68605a . _:68605a rdf:first ; rdf:rest _:68606a . _:68606a rdf:first ; rdf:rest _:68607a . _:68607a rdf:first ; rdf:rest _:68608a . _:68608a rdf:first ; rdf:rest _:68609a . _:68609a rdf:first ; rdf:rest rdf:nil . a owl:Class; rdfs:subClassOf ; "data about an ontology part"@en; "Data about an ontology part is a data item about a part of an ontology, for example a term"@en; "Person:Alan Ruttenberg"@en; rdfs:label "data about an ontology part"@en . a owl:Class; owl:equivalentClass _:6860aa; rdfs:subClassOf ; "obsolescence reason specification"@en; ; "The reason for which a term has been deprecated. The allowed values come from an enumerated list of predefined terms. See the specification of these instances for more detailed definitions of each enumerated value."@en; "The creation of this class has been inspired in part by Werner Ceusters' paper, Applying evolutionary terminology auditing to the Gene Ontology."@en; "PERSON: Alan Ruttenberg"@en, "PERSON: Melanie Courtot"@en; rdfs:label "obsolescence reason specification"@en . _:6860aa a owl:Class; owl:oneOf _:6860ba . _:6860ba rdf:first ; rdf:rest _:6860ca . _:6860ca rdf:first ; rdf:rest _:6860da . _:6860da rdf:first ; rdf:rest _:6860ea . _:6860ea rdf:first ; rdf:rest _:6860fa . _:6860fa rdf:first ; rdf:rest _:68610a . _:68610a rdf:first ; rdf:rest rdf:nil . a owl:Class; owl:equivalentClass _:68611a; rdfs:subClassOf ; "denotator type"@en; "The Basic Formal Ontology ontology makes a distinction between Universals and defined classes, where the formal are \"natural kinds\" and the latter arbitrary collections of entities."@en; "A denotator type indicates how a term should be interpreted from an ontological perspective."@en; "Alan Ruttenberg"@en; "Barry Smith, Werner Ceusters"@en; rdfs:label "denotator type"@en . _:68611a a owl:Class; owl:oneOf _:68612a . _:68612a rdf:first ; rdf:rest _:68613a . _:68613a rdf:first ; rdf:rest _:68614a . _:68614a rdf:first ; rdf:rest rdf:nil . a owl:Class; rdfs:subClassOf , _:68615a; "The sentence \"The article has Pubmed ID 12345.\" contains a CRID that has two parts: one part is the CRID symbol, which is '12345'; the other part denotes the CRID registry, which is Pubmed."@en; ; "A symbol that is part of a CRID and that is sufficient to look up a record from the CRID's registry."@en; "PERSON: Alan Ruttenberg"@en, "PERSON: Bill Hogan"@en, "PERSON: Bjoern Peters"@en, "PERSON: Melanie Courtot"@en; "CRID symbol"; "Original proposal from Bjoern, discussions at IAO calls"@en; rdfs:label "centrally registered identifier symbol"@en . _:68615a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:68616a, _:68617a; "The sentence \"The article has Pubmed ID 12345.\" contains a CRID that has two parts: one part is the CRID symbol, which is '12345'; the other part denotes the CRID registry, which is Pubmed."@en; ; "An information content entity that consists of a CRID symbol and additional information about the CRID registry to which it belongs."@en; "2014-05-05: In defining this term we take no position on what the CRID denotes. In particular do not assume it denotes a *record* in the CRID registry (since the registry might not have 'records')."@en, "Alan, IAO call 20101124: potentially the CRID denotes the instance it was associated with during creation."@en, "Note, IAO call 20101124: URIs are not always CRID, as not centrally registered. We acknowledge that CRID is a subset of a larger identifier class, but this subset fulfills our current needs. OBI PURLs are CRID as they are registered with OCLC. UPCs (Universal Product Codes from AC Nielsen)are not CRID as they are not centrally registered."@en; "PERSON: Alan Ruttenberg"@en, "PERSON: Bill Hogan"@en, "PERSON: Bjoern Peters"@en, "PERSON: Melanie Courtot"@en; "CRID"; "Original proposal from Bjoern, discussions at IAO calls"@en; rdfs:label "centrally registered identifier"@en . _:68616a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68617a a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:68618a . _:68618a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf ; "PubMed is a CRID registry. It has a code set of PubMed identifiers associated with journal articles. "@en; ; "A code set of CRID records, each consisting of a CRID symbol and additional information which was recorded in the code set through an assigning a centrally registered identifier process."@en; "Justin Whorton"@en, "PERSON: Alan Ruttenberg"@en, "PERSON: Bill Hogan"@en, "PERSON: Bjoern Peters"@en, "PERSON: Melanie Courtot"@en; "CRID registry"; "Original proposal from Bjoern, discussions at IAO calls"@en; "https://github.com/information-artifact-ontology/IAO/issues/237"@en; rdfs:label "centrally registered identifier registry"@en . a owl:Class; owl:equivalentClass _:68619a; rdfs:subClassOf , _:6861fa, _:68620a; "identifier"@en; "An information content entity that is the outcome of a dubbing process and is used to refer to one instance of entity shared by a group of people to refer to that individual entity."@en; "Justin Whorton"@en, "Mathias Brochhausen"@en; "proper name"@en; "https://github.com/information-artifact-ontology/IAO/issues/237"@en; "Mathias Brochhausen"; rdfs:comment "Sep 29, 2016: The current definition has been amended from the previous version: \"A proper name is an information content entity that is the outcome of a dubbing process and is used to refer to one instance of entity shared by a group of people to refer to that individual entity.\" to more accuratly reflect the necessary and sufficient condition on the class. (MB)"@en; rdfs:label "identifier"@en . _:68619a a owl:Class; owl:intersectionOf _:6861aa . _:6861aa rdf:first ; rdf:rest _:6861ca . _:6861ca rdf:first _:6861ba; rdf:rest _:6861ea . _:6861ba a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6861ea rdf:first _:6861da; rdf:rest rdf:nil . _:6861da a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6861fa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68620a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; owl:equivalentClass _:68621a; rdfs:subClassOf , _:68625a; "A planned process that provides a reference to an individual entity shared by a group of subscribers to refer to that individual entity."@en; "Justin Whorton"@en, "Mathias Brochhausen"@en; "dubbing process"@en, "naming"@en; "https://github.com/information-artifact-ontology/IAO/issues/237"@en; "Mathias Brochhausen"; rdfs:label "identifier creating process"@en . _:68621a a owl:Class; owl:intersectionOf _:68622a . _:68622a rdf:first ; rdf:rest _:68624a . _:68624a rdf:first _:68623a; rdf:rest rdf:nil . _:68623a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68625a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:68626a; "An information content entity that is a collection of other information content entities that has been created to identify or annotate things in a specified domain, and where the intention of its creators is that the collection has a one-to-one correspondence with those things."@en; "Alan Ruttenberg"@en, "Justin Whorton"@en, "Mathias Brochhausen"@en; "code map"@en, "code system"@en, "codeset"@en, "coding system"@en, "controlled vocabulary"@en; "https://github.com/information-artifact-ontology/IAO/issues/237"@en; "Alan Ruttenberg", "Clint Dowland", "Matt Diller", "Sarah Bost", "William R. Hogan"; rdfs:comment "Code sets might include non-entities/things (e.g. missing thumbs)."@en, "Does not imply absence vs. presence of any taxonomy."@en, "Does not imply that aggregated entities denote particulars, universals, or defined classes (a.k.a. attributive collections) or even that they denote only one of these three types of entities."@en, """Each aggregated entity is often (but not necessarily) associated with a text string—variously called a “description,” “name,” “title,” or “label”—that helps humans reach the target of denotation. When there is no such string, it is almost always because the entities take the form of human language words. For example, a “sex” or “gender” code set could contain “MALE” and “FEMALE,” or even “M” and “F” (by convention, we understand what these mean)."""@en, "For National Drug Codes (NDCs) and similar code sets, there doesn’t even have to be a single, fully-concretized copy somewhere (for example, for NDCs there is no centralized database or repository where they all live as one instance of concretization of code set). The code set can be “distributively” concretized. This seems like an unusual exception, but it also likely applies to Universal Product Codes (UPCs) and their follow on Global Trade Item Numbers (GTINs)."@en, "For each given domain, there can potentially exist multiple code sets. The multiplicity of code sets is partially due to the different specific purposes of those code sets."@en, "Many code sets are created for a specific purpose in addition to merely identifying or annotating core ideas of a specified domain."@en, "The information content entities do not denote each other."@en; rdfs:label "code set"@en . _:68626a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf ; "planned process"@en; "A process that realizes a plan which is the concretization of a plan specification."@en; ; rdfs:label "planned process"@en . a owl:Class; rdfs:subClassOf ; "A dependent entity that inheres in a bearer by virtue of how the bearer is related to other entities"; "quality (PATO)"; "PATO:0000072"; "quality"; "PATO:0000001"; rdfs:label "quality" . _:68627a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "A dependent entity that inheres in a bearer by virtue of how the bearer is related to other entities"; "PATOC:GVG" . a owl:Class; rdfs:subClassOf ; "A quality of a single physical entity inhering in the bearer by virtue of the bearer's size or shape or structure."; "quality"; "PATO:0000051"; ; rdfs:label "morphology" . _:68628a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "A quality of a single physical entity inhering in the bearer by virtue of the bearer's size or shape or structure."; "PATOC:GVG" . a owl:Class; rdfs:subClassOf ; "A morphological quality inhering in a bearer by virtue of the bearer's ratios of distances between its features (points, edges, surfaces and also holes etc)."; "PATO:0001647"; "relational shape quality"; "quality"; "PATO:0000052"; ; rdfs:comment "Shapes are invariant on size transformations. Shapes can be subdivided into 2D and 3D shapes, We can also make a distinction between shapes of complete self-connected objects, and shapes of parts of objects."; rdfs:label "shape" . _:68629a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "A morphological quality inhering in a bearer by virtue of the bearer's ratios of distances between its features (points, edges, surfaces and also holes etc)."; "PATOC:GVG" . a owl:Class; rdfs:subClassOf ; "A spatial quality inhering in a bearer by virtue of the bearer's placement which is defined by the angle between the bearer and an axis, or the angle between the bearer and another object."; "PATO:0000137"; "angular placement"; "quality"; "amount of rotation", "angle", "angular magnitude", "plane angle"; "PATO:0000133"; , ; rdfs:label "orientation" . _:6862aa a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "A spatial quality inhering in a bearer by virtue of the bearer's placement which is defined by the angle between the bearer and an axis, or the angle between the bearer and another object."; "PATOC:JE" . a owl:Class; rdfs:subClassOf ; "A spatial quality inhering in a bearer by virtue of the bearer's spatial location relative to other objects in the vicinity."; "PATO:0001032", "PATO:0001631"; "location", "placement", "relational spatial quality"; "quality"; "PATO:0000140"; ; rdfs:label "position" . _:6862ba a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "A spatial quality inhering in a bearer by virtue of the bearer's spatial location relative to other objects in the vicinity."; "PATOC:GVG" . a owl:Class; rdfs:subClassOf ; "A quality of a physical entity that exists through action of continuants at the physical level of organisation in relation to other entities."; "PATO:0002079"; "Wikipedia:Physical_property"; "relational physical quality"; "quality"; "PATO:0001018"; ; rdfs:label "physical quality" . _:6862ca a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "A quality of a physical entity that exists through action of continuants at the physical level of organisation in relation to other entities."; "PATOC:GVG" . a owl:Class; rdfs:subClassOf ; "A quality which inheres in a continuant."; "PATO:0001237", "PATO:0001238"; "snap:Quality"; "monadic quality of a continuant", "multiply inhering quality of a physical entity", "quality of a continuant", "quality of a single physical entity", "quality of an object", "quality of continuant"; "monadic quality of an object", "monadic quality of continuant"; "quality"; "PATO:0001241"; rdfs:comment "Relational qualities are qualities that hold between multiple entities. Normal (monadic) qualities such as the shape of a eyeball exist purely as a quality of that eyeball. A relational quality such as sensitivity to light is a quality of that eyeball (and connecting nervous system) as it relates to incoming light waves/particles."; rdfs:label "physical object quality" . _:6862da a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "A quality which inheres in a continuant."; "PATOC:GVG" . a owl:Class; rdfs:subClassOf ; "A shape quality inhering in a bearer by virtue of the bearer's having three angles."; "deltoid"; "quality"; "delta shaped", "triangle", "triangle-shaped"; "PATO:0001875"; , ; rdfs:label "triangular" . _:6862ea a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "A shape quality inhering in a bearer by virtue of the bearer's having three angles."; "wordreference:wordreference" . a owl:Class; rdfs:subClassOf ; "A shape quality inhering in a bearer by virtue of the bearer's being narrowly triangular, wider at the apex and tapering toward the base."; "wedge-shaped"; "quality"; "PATO:0001955"; ; rdfs:label "cuneate" . _:6862fa a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "A shape quality inhering in a bearer by virtue of the bearer's being narrowly triangular, wider at the apex and tapering toward the base."; "wordreference:wordreference" . a owl:Class; rdfs:subClassOf ; "A shape that inheres in a 2 dimensional entity, such as a cross section or projection of a 3 dimensional entity."; "quality"; "2-D projection", "cross-sectional"; "PATO:0002006"; ; rdfs:label "2-D shape" . _:68630a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "A shape that inheres in a 2 dimensional entity, such as a cross section or projection of a 3 dimensional entity."; "PATOC:CJM" . a owl:Class; rdfs:subClassOf ; "An orientation quality inhering in a bearer by virtue of the bearer having a position that is directed along the longitudinal or anterior-posterior axis."; ; "2014-10-17T14:24:19Z"; "quality"; "PATO:0005024"; ; rdfs:label "longitudinal orientation" . _:68631a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "An orientation quality inhering in a bearer by virtue of the bearer having a position that is directed along the longitudinal or anterior-posterior axis."; "PATOC:WD" . a owl:Class; rdfs:subClassOf ; "A shape that is in the form of a plug, being tube-like and expanded on one end."; "2018-11-12T18:24:41Z"^^xsd:dateTime; ; "plug like"; "quality"; "PATO:0040012"; rdfs:label "plug shaped" . _:68632a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "A shape that is in the form of a plug, being tube-like and expanded on one end."; "https://orcid.org/0000-0003-3162-7490" . a owl:Class; rdfs:subClassOf ; "A stage of Smed embryonic development, 0 - 2 days post-egg capsule deposition at 20˚C. Zygote and dispersed blastomere cleavage in a yolk syncytium."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "PMID:28072387"; "Schmidtea_mediterranea_Developmental_Stages"; rdfs:label "Stage 1" . _:68633a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "A stage of Smed embryonic development, 0 - 2 days post-egg capsule deposition at 20˚C. Zygote and dispersed blastomere cleavage in a yolk syncytium."; "PMID:28072387" . a owl:Class; rdfs:subClassOf ; "A stage of Smed embryonic development defined by a unique gene expression signature and morphology, 2 - 3 days post-egg capsule deposition at 20˚C. Sphere formation. A fraction of the blastomeres differentiate into temporary embryonic tissues that provide form and function to the embryo. Undifferentiated blastomeres remain in the embryonic wall."; ; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "PMID:28072387"; "protosphere"; "Schmidtea_mediterranea_Developmental_Stages"; rdfs:label "Stage 2" . _:68634a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "A stage of Smed embryonic development defined by a unique gene expression signature and morphology, 2 - 3 days post-egg capsule deposition at 20˚C. Sphere formation. A fraction of the blastomeres differentiate into temporary embryonic tissues that provide form and function to the embryo. Undifferentiated blastomeres remain in the embryonic wall."; "PMID:28072387" . _:68635a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget ; rdfs:comment "Depicted by field contains hematoxylin and eosin staining section of a stage 2 embryo. Scale bar = 100um" . a owl:Class; rdfs:subClassOf ; "A stage of Smed embryonic development defined by a unique gene expression signature and morphology, 2 - 4 days post-egg capsule deposition at 20˚C. Dispersed blastomere cleavage in the embryonic wall of nascent spheres. Yolk ingestion into the gut cavity."; ; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "PMID:28072387"; "Schmidtea_mediterranea_Developmental_Stages"; rdfs:label "Stage 3" . _:68636a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "A stage of Smed embryonic development defined by a unique gene expression signature and morphology, 2 - 4 days post-egg capsule deposition at 20˚C. Dispersed blastomere cleavage in the embryonic wall of nascent spheres. Yolk ingestion into the gut cavity."; "PMID:28072387" . _:68637a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget ; rdfs:comment "Depicted by field contains hematoxylin and eosin staining section of a stage 3 embryo. Scale bar = 100um" . a owl:Class; rdfs:subClassOf ; "A stage of Smed embryonic development defined by a unique gene expression signature and morphology, 3 - 5 days post-egg capsule deposition at 20˚C. Dispersed blastomere cleavage in the embryonic wall. Yolk ingestion into the gut cavity. Early embryonic gut formation."; ; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "PMID:28072387"; "Schmidtea_mediterranea_Developmental_Stages"; rdfs:label "Stage 4" . _:68638a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "A stage of Smed embryonic development defined by a unique gene expression signature and morphology, 3 - 5 days post-egg capsule deposition at 20˚C. Dispersed blastomere cleavage in the embryonic wall. Yolk ingestion into the gut cavity. Early embryonic gut formation."; "PMID:28072387" . _:68639a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget ; rdfs:comment "Depicted by field contains hematoxylin and eosin staining section of a stage 4 embryo. Scale bar = 100um" . a owl:Class; rdfs:subClassOf ; "A stage of Smed embryonic development defined by a unique gene expression signature and morphology, 5-7 days post-egg capsule deposition at 20˚C. Organogenesis onset. Downregulation of early embryo enriched transcripts and birth of adult lineages within the blastomere population. Early embryonic gut formation continues. Yolk ingestion into the gut cavity."; ; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "PMID:28072387"; "Schmidtea_mediterranea_Developmental_Stages"; rdfs:label "Stage 5" . _:6863aa a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "A stage of Smed embryonic development defined by a unique gene expression signature and morphology, 5-7 days post-egg capsule deposition at 20˚C. Organogenesis onset. Downregulation of early embryo enriched transcripts and birth of adult lineages within the blastomere population. Early embryonic gut formation continues. Yolk ingestion into the gut cavity."; "PMID:28072387" . _:6863ba a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget ; rdfs:comment "Depicted by field contains hematoxylin and eosin staining section of a stage 5 embryo. Scale bar = 100um" . a owl:Class; rdfs:subClassOf ; "A stage of Smed embryonic development defined by a unique gene expression signature and morphology, 7 - 9 days post-egg capsule deposition at 20˚C. Organogenesis and morphogenesis. Definitive organ formation. Temporary embryonic cell types degenerate. Embryo elongation."; ; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "PMID:28072387"; "Schmidtea_mediterranea_Developmental_Stages"; rdfs:label "Stage 6" . _:6863ca a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "A stage of Smed embryonic development defined by a unique gene expression signature and morphology, 7 - 9 days post-egg capsule deposition at 20˚C. Organogenesis and morphogenesis. Definitive organ formation. Temporary embryonic cell types degenerate. Embryo elongation."; "PMID:28072387" . _:6863da a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget ; rdfs:comment "Depicted by field contains hematoxylin and eosin staining section of a stage 6 embryo. Scale bar = 100um" . a owl:Class; rdfs:subClassOf ; "A stage of Smed embryonic development defined by a unique gene expression signature and morphology, 9 - 11 days post-egg capsule deposition at 20˚C. Organogenesis and organ maturation continues. Embryos elongated. Eyes just visible. Onset of gliding motility."; ; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "PMID:28072387", "PMID:28812561"; "Schmidtea_mediterranea_Developmental_Stages"; rdfs:label "Stage 7" . _:6863ea a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "A stage of Smed embryonic development defined by a unique gene expression signature and morphology, 9 - 11 days post-egg capsule deposition at 20˚C. Organogenesis and organ maturation continues. Embryos elongated. Eyes just visible. Onset of gliding motility."; "PMID:28072387" . _:6863fa a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget ; rdfs:comment "Depicted by field contains hematoxylin and eosin staining section of a stage 7 embryo. Scale bar = 100um" . a owl:Class; rdfs:subClassOf ; "A stage of Smed embryonic development defined by a unique gene expression signature and morphology, 13 - 15 days post-egg capsule deposition at 20˚C. Organogenesis and organ maturation continues. Hatching."; ; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "PMID:28072387"; "hatchling", "newborn hatchling"; "Schmidtea_mediterranea_Developmental_Stages"; rdfs:label "Stage 8" . _:68640a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "A stage of Smed embryonic development defined by a unique gene expression signature and morphology, 13 - 15 days post-egg capsule deposition at 20˚C. Organogenesis and organ maturation continues. Hatching."; "PMID:28072387" . _:68641a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget ; rdfs:comment "Depicted by field contains hematoxylin and eosin staining section of a stage 8 embryo. Scale bar = 100um" . a owl:Class; rdfs:subClassOf ; "A heterogeneous subpopulation of neoblasts with enriched expression of SoxP-1 and SoxP-2 thought to contain both pluripotent stem cells and tissue-specific progenitors."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "PMID:15972844", "PMID:25017721", "PMID:25956527", "PMID:26457503", "PMID:26651295", "PMID:27013241", "PMID:27150006", "PMID:27542689", "PMID:28287248", "PMID:28686611", "PMID:28757112", "PMID:29557542", "PMID:29674432", "PMID:29906446"; "sigma class neoblast", "sigma-class neoblast"; "Planarian_Anatomy"; rdfs:label "sigma neoblast" . _:68642a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "A heterogeneous subpopulation of neoblasts with enriched expression of SoxP-1 and SoxP-2 thought to contain both pluripotent stem cells and tissue-specific progenitors."; "PMID:25017721" . a owl:Class; owl:equivalentClass _:68643a; rdfs:subClassOf , , _:68647a; "Neoblasts and post-mitotic, differentiating daughters coexpressing POU2-3, six1/2-2, Sal1, Eya and Osr,required for maintenance and regeneration of protonephridial cell types."; "Planarian_Anatomy"; "PLANA:0000011"; rdfs:label "protonephridial progenitor cell" . _:68643a a owl:Class; owl:intersectionOf _:68644a . _:68644a rdf:first ; rdf:rest _:68646a . _:68646a rdf:first _:68645a; rdf:rest rdf:nil . _:68645a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68647a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68648a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Neoblasts and post-mitotic, differentiating daughters coexpressing POU2-3, six1/2-2, Sal1, Eya and Osr,required for maintenance and regeneration of protonephridial cell types."; "PMID:24523458", "PMID:28072387" . a owl:Class; owl:equivalentClass _:68649a; rdfs:subClassOf , , _:6864da; "Neoblasts and their differentiating daughters implicated in maintenance and regeneration of different tissues in the nervous system."; "neural committed stem cell", "neural precursor cell", "neural progenitor cell", "neuronal progenitor"; "Planarian_Anatomy"; "PLANA:0000012"; rdfs:label "neural progenitor cell" . _:68649a a owl:Class; owl:intersectionOf _:6864aa . _:6864aa rdf:first ; rdf:rest _:6864ca . _:6864ca rdf:first _:6864ba; rdf:rest rdf:nil . _:6864ba a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6864da a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6864ea a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Neoblasts and their differentiating daughters implicated in maintenance and regeneration of different tissues in the nervous system."; "PMID:21282632", "PMID:24173799", "PMID:25356635", "PMID:26057828", "PMID:26525673", "PMID:28072387", "PMID:29674432" . a owl:Class; rdfs:subClassOf , _:6864fa; "Musculature surrounding internal organs of the body."; ; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "FBbt:00005070", "PMID:26904543", "PMID:30471994"; "visceral muscle"; "Planarian_Anatomy"; rdfs:label "visceral musculature" . _:6864fa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68650a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Musculature surrounding internal organs of the body."; "PMID:26904543", "PMID:30471994" . _:68651a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget ; rdfs:comment "Image is an electron micrograph depicting the visceral musculature (arrowheads) that lies beneath the gut. The gut is identifiable by the collection of darkly stained lipid droplets in the top right corner and the white of the lumen at the top of the image. Scale bar is 10um" . a owl:Class; rdfs:subClassOf , , _:68652a, _:68653a; "An abundant neoblast subclass consisting of p53+, zfp1+ progenitors required for maintenance and regeneration of epidermal cell type(s)."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "PMID:25017721", "PMID:25956527", "PMID:26457503", "PMID:26651295", "PMID:27013241", "PMID:27150006", "PMID:27542689", "PMID:28292427", "PMID:28757112", "PMID:28807897", "PMID:29158443", "PMID:29557542", "PMID:29674431", "PMID:29674432", "PMID:29906446"; "zeta", "zeta class", "zeta class neoblast", "zeta-class neoblast", "zeta-neoblast"; "Planarian_Anatomy"; rdfs:label "zeta neoblast" . _:68652a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68653a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68654a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "An abundant neoblast subclass consisting of p53+, zfp1+ progenitors required for maintenance and regeneration of epidermal cell type(s)."; "PMID:25017721" . a owl:Class; rdfs:subClassOf ; "An epithelial cell lacking cilia."; ; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "XAO:0004225"; "Planarian_Anatomy"; rdfs:label "non ciliated epithelial cell" . _:68655a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget ; rdfs:comment "Image is an electron micrograph of the dorsal side of the animal where there is a transition from nonciliated epidermal cells to ciliated ones. On the left side of the image are the ciliated cells and on the right are the nonciliated. A few nonciliated have been marked with arrowheads. Scale bar is 10um." . a owl:Class; rdfs:subClassOf , , _:68656a, _:68657a, _:68658a, _:68659a, _:6865aa, _:6865ba, _:6865ca, _:6865da, _:6865ea, _:6865fa, _:68660a; "A plicate and protrusible organ that is the sole point of entry and exit for the Triclad gut. It contains epithelial, muscular, secretory and neuronal cell types."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "ISBN:9780070316607", "OCLC:16809160", "PMID:15866156", "PMID:16033796", "PMID:16311336", "PMID:16890156", "PMID:17251262", "PMID:17376870", "PMID:17390146", "PMID:17670787", "PMID:17905225", "PMID:17942485", "PMID:18063755", "PMID:18063757", "PMID:18202849", "PMID:18287199", "PMID:18456843", "PMID:18786419", "PMID:19048075", "PMID:19174194", "PMID:19211673", "PMID:19247960", "PMID:19766622", "PMID:19852954", "PMID:19933103", "PMID:20215344", "PMID:20223763", "PMID:20422023", "PMID:20511647", "PMID:20599901", "PMID:20707997", "PMID:20865784", "PMID:20967238", "PMID:21179478", "PMID:21282632", "PMID:21295483", "PMID:21356107", "PMID:21458439", "PMID:21664348", "PMID:21747960", "PMID:21806978", "PMID:21828097", "PMID:21852957", "PMID:21894189", "PMID:21937596", "PMID:22125640", "PMID:22339734", "PMID:22371573", "PMID:22385657", "PMID:22411224", "PMID:22439894", "PMID:22451003", "PMID:22543868", "PMID:22884275", "PMID:23079596", "PMID:23123964", "PMID:23250205", "PMID:23297191", "PMID:23318635", "PMID:23405188", "PMID:23629965", "PMID:23652002", "PMID:23954785", "PMID:24040508", "PMID:24063805", "PMID:24120894", "PMID:24131630", "PMID:24173799", "PMID:24238224", "PMID:24704339", "PMID:24737865", "PMID:24922054", "PMID:25017721", "PMID:25254346", "PMID:25356635", "PMID:25558068", "PMID:25725068", "PMID:25956527", "PMID:26062938", "PMID:26114597", "PMID:26457503", "PMID:26459857", "PMID:26525673", "PMID:26711341", "PMID:27034770", "PMID:27063937", "PMID:27074666", "PMID:27122174", "PMID:27150006", "PMID:27163480", "PMID:27240733", "PMID:27441386", "PMID:27501047", "PMID:27551436", "PMID:27612382", "PMID:27612384", "PMID:27654173", "PMID:28072387", "PMID:28126842", "PMID:28171748", "PMID:28245923", "PMID:28287248", "PMID:28292427", "PMID:28434803", "PMID:28461239", "PMID:28495872", "PMID:28686611", "PMID:28807897", "PMID:28893948", "PMID:29291981", "PMID:29674431", "PMID:29906446", "PMID:30194301", "PMID:30237141", "PMID:30282036", "PMID:30383829", "PMID:30399335", "PMID:30471994", "PMID:30485821", "PMID:30729158", "PMID:30962434", "https://doi.org/10.1101/279364"; "definitive pharynx"; "Planarian_Anatomy"; rdfs:label "pharynx" . _:68656a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68657a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68658a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68659a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6865aa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6865ba a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6865ca a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6865da a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6865ea a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6865fa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68660a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68661a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "A plicate and protrusible organ that is the sole point of entry and exit for the Triclad gut. It contains epithelial, muscular, secretory and neuronal cell types."; "OCLC:16809160" . a owl:Class; rdfs:subClassOf , , _:68662a, _:68663a, _:68664a, _:68665a, _:68666a, _:68667a, _:68668a, _:68669a, _:6866aa, _:6866ba, _:6866ca; "Bipolar photoreceptor neurons with dendritic projections into the optic cup and axons that innervate the underlying brain."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "ISBN:9780070316607", "PMID:16033796", "PMID:17251262", "PMID:17390146", "PMID:17553481", "PMID:17905225", "PMID:17942485", "PMID:18202849", "PMID:19048075", "PMID:20967238", "PMID:21282632", "PMID:21852957", "PMID:22339734", "PMID:22411224", "PMID:22427692", "PMID:22445864", "PMID:22549959", "PMID:22884275", "PMID:23250205", "PMID:23318641", "PMID:24063805", "PMID:24922054", "PMID:25254346", "PMID:25356635", "PMID:25493551", "PMID:25772472", "PMID:26017970", "PMID:26618653", "PMID:27068018", "PMID:27606067", "PMID:27612384", "PMID:27800171", "PMID:28137894", "PMID:28216315", "PMID:28245923", "PMID:28495872", "PMID:28976975", "PMID:29547123", "PMID:29674431", "PMID:29674432", "PMID:30143032", "PMID:30399335", "PMID:30471994", "PMID:30485821", "UBERON:0006562"; "PRN", "neuronal photoreceptive cell", "optical neuron", "photoreceptive neuron", "photoreceptor cell", "photosensitive cell", "visual neuron"; "Planarian_Anatomy"; rdfs:label "photoreceptor neuron" . _:68662a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68663a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68664a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68665a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68666a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68667a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68668a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68669a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6866aa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6866ba a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6866ca a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6866da a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Bipolar photoreceptor neurons with dendritic projections into the optic cup and axons that innervate the underlying brain."; "PMID:21852957", "PMID:22884275" . a owl:Class; rdfs:subClassOf , , , , _:6866ea, _:6866fa, _:68670a, _:68671a, _:68672a, _:68673a, _:68674a, _:68675a, _:68676a, _:68677a, _:68678a, _:68679a, _:6867aa, _:6867ba, _:6867ca, _:6867da, _:6867ea, _:6867fa, _:68680a, _:68681a, _:68682a; "Post-mitotic, mesenchymally and epidermally located progenitors downstream of the Category 3 cells."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "PMID:18786419", "PMID:22439894", "PMID:25017721", "PMID:26457503", "PMID:28072387"; "Planarian_Anatomy"; rdfs:label "Category 4 cell" . _:6866ea a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6866fa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68670a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68671a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68672a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68673a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68674a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68675a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68676a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68677a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68678a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68679a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6867aa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6867ba a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6867ca a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6867da a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6867ea a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6867fa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68680a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68681a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68682a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68683a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Post-mitotic, mesenchymally and epidermally located progenitors downstream of the Category 3 cells."; "PMID:25017721", "PMID:26457503" . a owl:Class; rdfs:subClassOf , _:68684a; "Progenitor neoblasts implicated in the maintenance and regeneration of muscle fibers."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "PMID:29674431", "PMID:29674432", "PMID:30471994"; "Planarian_Anatomy"; rdfs:label "muscle progenitor cell" . _:68684a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68685a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Progenitor neoblasts implicated in the maintenance and regeneration of muscle fibers."; "PMID:25017721" . a owl:Class; rdfs:subClassOf , , _:68686a, _:68687a, _:68688a, _:68689a, _:6868aa, _:6868ba, _:6868ca, _:6868da, _:6868ea, _:6868fa, _:68690a, _:68691a, _:68692a, _:68693a, _:68694a, _:68695a; "Excretory organs consisting of flame cells, proximal tubules, and distal tubules connected to a mesenchymal collecting duct."; ; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "ISBN:9780070316607", "OCLC:16809160", "PMID:19852954", "PMID:19933103", "PMID:21828097", "PMID:21937596", "PMID:22479207", "PMID:23318635", "PMID:23318641", "PMID:23954785", "PMID:24063805", "PMID:24523458", "PMID:24737865", "PMID:24992682", "PMID:25017721", "PMID:25254346", "PMID:26057828", "PMID:26457503", "PMID:26651295", "PMID:26711341", "PMID:27068018", "PMID:27150006", "PMID:27501047", "PMID:27551436", "PMID:27612384", "PMID:28245923", "PMID:28292427", "PMID:28807897", "PMID:29100657", "PMID:29158443", "PMID:29674431", "PMID:29674432", "UBERON:0006973"; "excretory organ", "nephridia", "osmoregulatory duct", "protonephridial tubule"; "Planarian_Anatomy"; rdfs:label "protonephridia" . _:68686a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68687a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68688a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68689a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6868aa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6868ba a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6868ca a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6868da a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6868ea a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6868fa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68690a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68691a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68692a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68693a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68694a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68695a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68696a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Excretory organs consisting of flame cells, proximal tubules, and distal tubules connected to a mesenchymal collecting duct."; "OCLC:16809160", "PMID:21828097", "PMID:26057828" . _:68697a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget ; rdfs:comment "http://purl.obolibrary.org/obo/Depicted by field contains a whole-mount acetylated tubulin (AcTub) staining. Scale bars_ 500 um. Inset to right shows depth-coded projection of AcTub staining. Superficial structures are in blue and deeper structures are in red. Scale bars: 50 um" . a owl:Class; rdfs:subClassOf owl:Thing; "Organisms sharing a specified genotype or karyotype."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "Planarian_Anatomy"; rdfs:label "biotype" . a owl:Class; rdfs:subClassOf , , , _:68698a, _:68699a, _:6869aa, _:6869ba, _:6869ca, _:6869da, _:6869ea, _:6869fa, _:686a0a, _:686a1a, _:686a2a, _:686a3a, _:686a4a, _:686a5a, _:686a6a, _:686a7a, _:686a8a, _:686a9a, _:686aaa; "Post-mitotic, ciliated epidermal cells."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "PMID:25017721", "PMID:28072387"; "Planarian_Anatomy"; rdfs:label "Category 5 cell" . _:68698a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68699a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6869aa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6869ba a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6869ca a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6869da a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6869ea a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6869fa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:686a0a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:686a1a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:686a2a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:686a3a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:686a4a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:686a5a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:686a6a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:686a7a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:686a8a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:686a9a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:686aaa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:686aba a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Post-mitotic, ciliated epidermal cells."; "PMID:25017721" . a owl:Class; rdfs:subClassOf , , _:686aca, _:686ada, _:686aea, _:686afa, _:686b0a, _:686b1a, _:686b2a, _:686b3a, _:686b4a, _:686b5a; "An innervated, muscular pump that ingests yolk cells into the gut cavity. The embryonic pharynx is an extraembryonic tissue that forms during Stage 2, functions during Stages 3-5, and degenerates during Stages 6-7."; ; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "FBbt:00001866", "ISBN:9780070316607", "PMID:28072387"; "temporary embryonic pharynx"; "Planarian_Anatomy"; rdfs:label "embryonic pharynx" . _:686aca a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:686ada a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:686aea a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:686afa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:686b0a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:686b1a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:686b2a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:686b3a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:686b4a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:686b5a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:686b6a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "An innervated, muscular pump that ingests yolk cells into the gut cavity. The embryonic pharynx is an extraembryonic tissue that forms during Stage 2, functions during Stages 3-5, and degenerates during Stages 6-7."; "PMID:28072387" . _:686b7a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget ; rdfs:comment "Depicted by field contains hematoxylin and eosin staining section of a stage 5 embryo that zooms in on the embryonic pharynx." . a owl:Class; rdfs:subClassOf ; "Asexual animal strains that reproduce solely through fission followed by whole body regeneration. Asexual Smed are stable diploids that harbor a chromosome translocation, making them karyotypically distinct from sexual Smed."; ; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "PMID:11972158", "PMID:28812561"; "asexual", "asexual adult", "asexual biotype"; "Planarian_Anatomy"; rdfs:label "Smed asexual biotype" . _:686b8a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Asexual animal strains that reproduce solely through fission followed by whole body regeneration. Asexual Smed are stable diploids that harbor a chromosome translocation, making them karyotypically distinct from sexual Smed."; "PMID:11972158", "PMID:17376870" . _:686b9a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget ; rdfs:comment "Image is an scanning electron micrograph of the dorsal side of an entire animal. This is an adult asexual Schmidtea mediterranea. Anterior is to the right and posterior is to the left. Scale bar is 500um." . a owl:Class; rdfs:subClassOf , _:686baa; "The nervous system is an organ system containing predominantly neuron and glial cells. In bilaterally symmetrical organisms, it is arranged in a network of tree-like structures connected to a central body. The main functions of the nervous system are to regulate and control body functions, and to receive sensory input, process this information, and generate behavior [CUMBO]."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "ISBN:9780070316607", "PMID:16033796", "PMID:16311336", "PMID:17251262", "PMID:18202849", "PMID:19048075", "PMID:19211673", "PMID:19247960", "PMID:20223763", "PMID:20707997", "PMID:20967238", "PMID:21806978", "PMID:22339734", "PMID:22427692", "PMID:22445864", "PMID:22549959", "PMID:22696458", "PMID:23079596", "PMID:23250205", "PMID:23297191", "PMID:23318641", "PMID:23903188", "PMID:24131630", "PMID:24173799", "PMID:24737865", "PMID:24950970", "PMID:25254346", "PMID:25278423", "PMID:25725068", "PMID:26062938", "PMID:26114597", "PMID:26556349", "PMID:27013241", "PMID:27068018", "PMID:27163480", "PMID:27501047", "PMID:27523733", "PMID:27551436", "PMID:27612384", "PMID:27864883", "PMID:28292427", "PMID:29357350", "PMID:29557542", "PMID:29674431", "PMID:30399335", "UBERON:0001016"; "nerve system"; "Planarian_Anatomy"; rdfs:label "nervous system" . _:686baa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:686bba a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "The nervous system is an organ system containing predominantly neuron and glial cells. In bilaterally symmetrical organisms, it is arranged in a network of tree-like structures connected to a central body. The main functions of the nervous system are to regulate and control body functions, and to receive sensory input, process this information, and generate behavior [CUMBO]."; "UBERON:0001016" . a owl:Class; rdfs:subClassOf , , _:686bca, _:686bda, _:686bea, _:686bfa, _:686c0a, _:686c1a, _:686c2a, _:686c3a, _:686c4a, _:686c5a, _:686c6a, _:686c7a, _:686c8a, _:686c9a, _:686caa, _:686cba, _:686cca, _:686cda, _:686cea; "The planarian triclad gut contains a central anterior gut branch connected to two posterior gut branches arranged around the pharynx. Secondary gut branches extend laterally from the primary gut branches, while tertiary gut branches extend from the secondary branches. Food and waste enter and exit the gut through the pharynx."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "ISBN:9780070316607", "PMID:17553481", "PMID:17942485", "PMID:18063757", "PMID:18287199", "PMID:19174194", "PMID:19247960", "PMID:19933103", "PMID:20707997", "PMID:20865784", "PMID:20967238", "PMID:21179478", "PMID:21282632", "PMID:21356107", "PMID:21458439", "PMID:21566185", "PMID:21566195", "PMID:21664348", "PMID:21806978", "PMID:21828097", "PMID:22411224", "PMID:22439894", "PMID:22451003", "PMID:22899852", "PMID:23079596", "PMID:23235145", "PMID:23250205", "PMID:23318635", "PMID:23318641", "PMID:23405188", "PMID:23903188", "PMID:23954785", "PMID:24040508", "PMID:24063805", "PMID:24120894", "PMID:24173799", "PMID:24238224", "PMID:24415944", "PMID:24737865", "PMID:24950970", "PMID:24992682", "PMID:25017721", "PMID:25254346", "PMID:25356635", "PMID:25558068", "PMID:25956527", "PMID:26062938", "PMID:26114597", "PMID:26457503", "PMID:26556349", "PMID:26651295", "PMID:27034770", "PMID:27063937", "PMID:27074666", "PMID:27122174", "PMID:27150006", "PMID:27163480", "PMID:27240733", "PMID:27441386", "PMID:27501047", "PMID:27542689", "PMID:27551436", "PMID:27612382", "PMID:27612384", "PMID:27864883", "PMID:28072387", "PMID:28216315", "PMID:28245923", "PMID:28287248", "PMID:28292427", "PMID:28461239", "PMID:28686611", "PMID:28807897", "PMID:29100657", "PMID:29158443", "PMID:29547123", "PMID:29674431", "PMID:29674432", "PMID:29906446", "PMID:30143032", "PMID:30194301", "PMID:30282036", "PMID:30297872", "PMID:30383829", "PMID:30471994", "PMID:30962434", "UBERON:0000160", "https://doi.org/10.1101/279364"; "adult gut", "blind gut", "definitive gut", "digestive tract", "gastrovascular digestive tract", "gastrovascular tract", "intestinal tract", "intestine", "three-branched gut", "triclad gut"; "Planarian_Anatomy"; rdfs:label "gut" . _:686bca a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:686bda a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:686bea a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:686bfa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:686c0a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:686c1a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:686c2a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:686c3a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:686c4a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:686c5a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:686c6a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:686c7a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:686c8a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:686c9a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:686caa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:686cba a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:686cca a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:686cda a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:686cea a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:686cfa a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "The planarian triclad gut contains a central anterior gut branch connected to two posterior gut branches arranged around the pharynx. Secondary gut branches extend laterally from the primary gut branches, while tertiary gut branches extend from the secondary branches. Food and waste enter and exit the gut through the pharynx."; "PMID:3490491" . a owl:Class; rdfs:subClassOf ; "Strains of cross-fertilizing hemaphrodites that reproduce sexually and do not undergo fission. After mating, each parent lays an egg capsule containing one or more embryos. Sexual Smed are stable diploids."; ; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "PMID:11972158", "PMID:19022767", "PMID:28812561"; "hermaphroditic biotype", "sexual", "sexual hermaphrodite"; "Planarian_Anatomy"; rdfs:label "Smed sexual biotype" . _:686d0a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Strains of cross-fertilizing hemaphrodites that reproduce sexually and do not undergo fission. After mating, each parent lays an egg capsule containing one or more embryos. Sexual Smed are stable diploids."; "PMID:11972158", "PMID:19022767" . _:686d1a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget ; rdfs:comment "Depicted by field contains light micrscope image of asexual and sexual biotypes of Schmidtea meditteranea with their respective karyotypes. Note that the asexual bioptype has a chromosome inversion compared to the sexual." . a owl:Class; rdfs:subClassOf , , , _:686d2a, _:686d3a, _:686d4a, _:686d5a, _:686d6a, _:686d7a, _:686d8a, _:686d9a, _:686daa, _:686dba, _:686dca, _:686dda, _:686dea, _:686dfa, _:686e0a, _:686e1a, _:686e2a, _:686e3a, _:686e4a; "Post-mitotic, mesenchymally located epidermal progenitors downstream of the zeta neoblasts."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "PMID:18786419", "PMID:20040488", "PMID:21894189", "PMID:22385657", "PMID:22427692", "PMID:22439894", "PMID:22899852", "PMID:23318635", "PMID:23629965", "PMID:24063805", "PMID:24173799", "PMID:24367277", "PMID:25017721", "PMID:26114597", "PMID:26651295", "PMID:27013241", "PMID:27068018", "PMID:27542689", "PMID:28072387", "PMID:29674431"; "Category 2 gene expressing cell", "NB.21.11e expressing cell", "Smed-NB.21.11e+ cell", "early division progeny", "early epidermal progenitor", "early neoblast progeny", "early post-mitotic progeny", "early progeny", "prog-1+ epidermal progenitor cell"; "Planarian_Anatomy"; rdfs:label "Category 2 cell" . _:686d2a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:686d3a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:686d4a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:686d5a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:686d6a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:686d7a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:686d8a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:686d9a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:686daa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:686dba a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:686dca a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:686dda a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:686dea a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:686dfa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:686e0a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:686e1a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:686e2a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:686e3a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:686e4a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:686e5a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Post-mitotic, mesenchymally located epidermal progenitors downstream of the zeta neoblasts."; "PMID:18786419", "PMID:20040488", "PMID:22385657", "PMID:25017721", "PMID:26114597" . a owl:Class; rdfs:subClassOf , , _:686e6a, _:686e7a, _:686e8a, _:686e9a, _:686eaa, _:686eba, _:686eca, _:686eda; "A single cell layer of extraembryonic, post-mitotic ectodermal cells bounding the embryo. The primitive ectoderm forms during Stage 2 and is thought to degenerate as the definitive epidermis forms during Stages 5-7."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "OCLC:20423827", "OCLC:464776945", "OCLC:82522822", "PMID:28072387", "https://github.com/obophenotype/planaria-ontology/blob/master/metadata/planarefs/planaref-0000001.md"; "Planarian_Anatomy"; rdfs:label "primitive ectoderm" . _:686e6a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:686e7a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:686e8a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:686e9a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:686eaa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:686eba a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:686eca a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:686eda a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:686eea a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "A single cell layer of extraembryonic, post-mitotic ectodermal cells bounding the embryo. The primitive ectoderm forms during Stage 2 and is thought to degenerate as the definitive epidermis forms during Stages 5-7."; "OCLC:20423827", "OCLC:464776945", "OCLC:82522822", "https://github.com/obophenotype/planaria-ontology/blob/master/metadata/planarefs/planaref-0000001.md" . a owl:Class; rdfs:subClassOf , , _:686efa, _:686f0a, _:686f1a, _:686f2a, _:686f3a; "The median line/ plane of bilateral symmetry along the anteroposterior axis."; ; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "NCIT:C81170"; "Planarian_Anatomy"; rdfs:label "midline" . _:686efa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:686f0a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:686f1a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:686f2a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:686f3a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:686f4a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget ; rdfs:comment "Illustration of the midline (in green)." . a owl:Class; rdfs:subClassOf , , _:686f5a, _:686f6a, _:686f7a, _:686f8a, _:686f9a, _:686faa, _:686fba, _:686fca, _:686fda, _:686fea, _:686ffa; "Non-neuronal, pigmented cells arrayed along the proximal side of the optic cup."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "PMID:17251262", "PMID:17390146", "PMID:17553481", "PMID:17905225", "PMID:20967238", "PMID:21282632", "PMID:21458439", "PMID:21852957", "PMID:22339734", "PMID:22445864", "PMID:22884275", "PMID:23250205", "PMID:23318641", "PMID:24063805", "PMID:25254346", "PMID:25493551", "PMID:26017970", "PMID:27122174", "PMID:27551436", "PMID:27606067", "PMID:28137894", "PMID:28245923", "PMID:28287248", "PMID:28495872", "PMID:28976975", "PMID:29158443", "PMID:29674431", "PMID:29674432", "PMID:30471994"; "eye pigment cell", "eye pigment cup cell", "eye pigment producing cell", "eye pigmented cell", "melanin pigment cell", "optic cup cell", "photoceptor pigmented cell"; "Planarian_Anatomy"; rdfs:label "pigment cup cell" . _:686f5a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:686f6a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:686f7a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:686f8a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:686f9a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:686faa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:686fba a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:686fca a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:686fda a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:686fea a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:686ffa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68700a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Non-neuronal, pigmented cells arrayed along the proximal side of the optic cup."; "PMID:21852957", "PMID:22884275" . a owl:Class; owl:equivalentClass _:68701a; rdfs:subClassOf , _:68706a, _:68707a; "The median line/plane of bilateral symmetry along the anteroposterior axis on the dorsal surface of the animal."; ; "dorsal region of midline"; "Planarian_Anatomy"; "PLANA:0000032"; rdfs:label "dorsal midline" . _:68701a a owl:Class; owl:intersectionOf _:68703a . _:68703a rdf:first _:68702a; rdf:rest _:68705a . _:68702a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68705a rdf:first _:68704a; rdf:rest rdf:nil . _:68704a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68706a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68707a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68708a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget ; rdfs:comment "Illustration of the dorsal midline (in green)." . a owl:Class; owl:equivalentClass _:68709a; rdfs:subClassOf , , _:6870da; "Mitotically active zeta neoblasts and their post-mitotic descendants which undergo progressive differentiation and outward directed movement through the mesenchyme prior to incorporation into the epidermis, where terminal differentiation occurs."; "epithelial progenitor"; "Planarian_Anatomy"; "PLANA:0000033"; rdfs:label "epidermal progenitor cell" . _:68709a a owl:Class; owl:intersectionOf _:6870aa . _:6870aa rdf:first ; rdf:rest _:6870ca . _:6870ca rdf:first _:6870ba; rdf:rest rdf:nil . _:6870ba a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6870da a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6870ea a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Mitotically active zeta neoblasts and their post-mitotic descendants which undergo progressive differentiation and outward directed movement through the mesenchyme prior to incorporation into the epidermis, where terminal differentiation occurs."; "PMID:27150006", "PMID:27606067", "PMID:29674432", "PMID:30282036" . a owl:Class; rdfs:subClassOf , , _:6870fa, _:68710a, _:68711a, _:68712a, _:68713a, _:68714a, _:68715a, _:68716a, _:68717a, _:68718a, _:68719a, _:6871aa, _:6871ba, _:6871ca, _:6871da, _:6871ea, _:6871fa, _:68720a, _:68721a; "A single cell layer of post-mitotic epithelial cells containing ciliated and non-ciliated cell types forming the exterior surface of the animal."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "ISBN:9780070316607", "OCLC:16809160", "PMID:15866156", "PMID:16311336", "PMID:18786419", "PMID:19048075", "PMID:19247960", "PMID:19852954", "PMID:20215344", "PMID:20511647", "PMID:20599901", "PMID:20865784", "PMID:21179478", "PMID:21282632", "PMID:21295483", "PMID:22252539", "PMID:22549959", "PMID:23235145", "PMID:23297191", "PMID:23954785", "PMID:24120894", "PMID:24173799", "PMID:24922054", "PMID:24950970", "PMID:25558068", "PMID:25772472", "PMID:26114597", "PMID:26457503", "PMID:26651295", "PMID:26711341", "PMID:27034770", "PMID:27074666", "PMID:27150006", "PMID:27163480", "PMID:27240733", "PMID:27501047", "PMID:27612384", "PMID:28137894", "PMID:28216315", "PMID:28245923", "PMID:28292427", "PMID:28686611", "PMID:28757112", "PMID:28976975", "PMID:29100657", "PMID:29158443", "PMID:29273738", "PMID:29674431", "PMID:29674432", "PMID:29906446", "PMID:30194301", "PMID:30282036", "PMID:30962434", "UBERON:0001003"; "definitive epidermis", "epidermal layer", "epidermis", "epithelium", "mature epidermis", "tegument"; "Planarian_Anatomy"; rdfs:comment "At present, this definition does not apply to epithelial structures other than the dorsal and ventral epidermis (i.e., the pharyngeal epithelium)."; rdfs:label "epidermis" . _:6870fa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68710a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68711a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68712a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68713a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68714a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68715a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68716a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68717a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68718a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68719a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6871aa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6871ba a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6871ca a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6871da a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6871ea a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6871fa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68720a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68721a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68722a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "A single cell layer of post-mitotic epithelial cells containing ciliated and non-ciliated cell types forming the exterior surface of the animal."; "OCLC:16809160" . a owl:Class; rdfs:subClassOf , , , _:68723a, _:68724a, _:68725a, _:68726a, _:68727a, _:68728a, _:68729a, _:6872aa, _:6872ba, _:6872ca, _:6872da, _:6872ea, _:6872fa, _:68730a, _:68731a, _:68732a, _:68733a, _:68734a, _:68735a; "Post-mitotic, mesenchymally located epidermal progenitors downstream of the Category 2 cells."; ; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "PMID:18786419", "PMID:20040488", "PMID:21894189", "PMID:22252539", "PMID:22427692", "PMID:22439894", "PMID:22899852", "PMID:23297191", "PMID:23318635", "PMID:23629965", "PMID:23954785", "PMID:24063805", "PMID:24173799", "PMID:24367277", "PMID:26114597", "PMID:26457503", "PMID:26651295", "PMID:27013241", "PMID:27068018", "PMID:28072387"; "AGAT-1 expressing cell", "AGAT1 expressing cell", "Category 3 gene expressing cell", "Smed-AGAT-1+ cell", "late division progeny", "late epidermal progenitor", "late neoblast progeny", "late postmitotic progeny", "late progeny"; "Planarian_Anatomy"; rdfs:label "Category 3 cell" . _:68723a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68724a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68725a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68726a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68727a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68728a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68729a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6872aa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6872ba a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6872ca a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6872da a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6872ea a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6872fa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68730a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68731a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68732a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68733a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68734a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68735a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68736a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Post-mitotic, mesenchymally located epidermal progenitors downstream of the Category 2 cells."; "PMID:18786419", "PMID:20040488", "PMID:26114597", "PMID:26457503" . a owl:Class; rdfs:subClassOf , , _:68737a, _:68738a, _:68739a, _:6873aa, _:6873ba, _:6873ca, _:6873da, _:6873ea, _:6873fa, _:68740a, _:68741a, _:68742a; "An organ that detects light."; ; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "ISBN:9780070316607", "PMID:15866156", "PMID:15972844", "PMID:16311336", "PMID:16890156", "PMID:17251262", "PMID:17553481", "PMID:17905225", "PMID:17942485", "PMID:18063755", "PMID:18063757", "PMID:18202849", "PMID:18287199", "PMID:18456843", "PMID:18786419", "PMID:19048075", "PMID:19174194", "PMID:19211673", "PMID:19247960", "PMID:19766622", "PMID:19805089", "PMID:19852954", "PMID:20040488", "PMID:20215344", "PMID:20223763", "PMID:20422023", "PMID:20599901", "PMID:20707997", "PMID:20865784", "PMID:20967238", "PMID:21179478", "PMID:21282632", "PMID:21295481", "PMID:21295483", "PMID:21356107", "PMID:21458439" . _:68737a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68738a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68739a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6873aa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6873ba a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6873ca a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6873da a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6873ea a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6873fa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68740a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68741a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68742a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . "PMID:21566185", "PMID:21566195", "PMID:21747960", "PMID:21806978", "PMID:21828097", "PMID:21852957", "PMID:21894189", "PMID:21937596", "PMID:22125640", "PMID:22318224", "PMID:22339734", "PMID:22385657", "PMID:22411224", "PMID:22439894", "PMID:22445864", "PMID:22479207", "PMID:22549959", "PMID:22884275", "PMID:22899852", "PMID:23235145", "PMID:23297191", "PMID:23318635", "PMID:23318641", "PMID:23405188", "PMID:23629965", "PMID:23903188", "PMID:24063805", "PMID:24120894", "PMID:24131630", "PMID:24173799", "PMID:24238224", "PMID:24415944", "PMID:24704339", "PMID:24737865", "PMID:24922054", "PMID:24950970", "PMID:24992682", "PMID:25017721", "PMID:25254346", "PMID:25356635", "PMID:25493551", "PMID:25558068", "PMID:25725068", "PMID:25772472", "PMID:25956527", "PMID:26017970", "PMID:26062938", "PMID:26114597", "PMID:26457503", "PMID:26525673", "PMID:26556349", "PMID:26618653", "PMID:26711341", "PMID:26884331", "PMID:27034770", "PMID:27063937", "PMID:27150006", "PMID:27240733", "PMID:27542689", "PMID:27551436", "PMID:27606067", "PMID:27654173", "PMID:27800171", "PMID:28171748", "PMID:28216315", "PMID:28287248", "PMID:28292427", "PMID:28495872", "PMID:28686611", "PMID:28893948", "PMID:28976975", "PMID:29100657", "PMID:29158443", "PMID:29273738", "PMID:29291974", "PMID:29291981", "PMID:29357350", "PMID:29547123", "PMID:29674431", "PMID:30237141", "PMID:30282036", "PMID:30297872", "PMID:30383829", "PMID:30485821", "PMID:30962434", "UBERON:0000970", "https://doi.org/10.1101/279364"; "cerebral eye", "eye spot", "eye-spot", "eyespot", "ocelli", "photoreceptor"; "Planarian_Anatomy"; rdfs:comment "Depicted by field contains hematoxylin and eosin staining section of a asexual adult animal. The eyes are indicated by arrows. Scale bar = 250um"; rdfs:label "eye" . _:68743a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "An organ that detects light."; "UBERON:0000970" . a owl:Class; ; rdfs:comment "we will move forward using \"tissue\" instead. We have not listed anything as a regenerating or developing tissue, so this seems unnecessary"; rdfs:label "obsolete definitive tissue"; owl:deprecated true . a owl:Class; owl:equivalentClass _:68744a; rdfs:subClassOf , _:68749a, _:6874aa; "The median line/ plane of bilateral symmetry along the anteroposterior axis on the ventral surface of the animal."; ; "ventral region of midline"; "Planarian_Anatomy"; "PLANA:0000038"; rdfs:label "ventral midline" . _:68744a a owl:Class; owl:intersectionOf _:68746a . _:68746a rdf:first _:68745a; rdf:rest _:68748a . _:68745a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68748a rdf:first _:68747a; rdf:rest rdf:nil . _:68747a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68749a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6874aa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6874ba a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget ; rdfs:comment "Illustration of the ventral midline (in green)." . a owl:Class; rdfs:subClassOf , _:6874ca; "An abundant neoblast subclass, exhibiting enriched expression of gata456a, hnf4, prox-1 and nkx2.2, implicated in maintenance and regeneration of the definitive gut."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "PMID:25017721", "PMID:26651295", "PMID:27013241", "PMID:27150006", "PMID:27542689", "PMID:28287248", "PMID:28757112", "PMID:28807897", "PMID:29674431", "PMID:29674432", "PMID:29906446"; "gamma", "gamma class neoblast", "gamma-neoblast", "gut progenitor cell"; "Planarian_Anatomy"; rdfs:label "gamma neoblast" . _:6874ca a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6874da a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "An abundant neoblast subclass, exhibiting enriched expression of gata456a, hnf4, prox-1 and nkx2.2, implicated in maintenance and regeneration of the definitive gut."; "PMID:25017721" . a owl:Class; rdfs:comment "this term is not needed. All previous children of this term (Stage 1, Sage 2, etc) are now children of GO life cycle stage or zygote stage"; rdfs:label "obsolete Schmidtea mediterranea developmental stage"; owl:deprecated true . a owl:Class; rdfs:subClassOf , , _:6874ea, _:6874fa, _:68750a, _:68751a, _:68752a, _:68753a; "Stage 3-5 embryo hemisphere centered around the pole opposite the embryonic pharynx."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "PMID:28072387", "UBERON:0008259"; "Planarian_Anatomy"; rdfs:label "aboral hemisphere" . _:6874ea a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6874fa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68750a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68751a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68752a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68753a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68754a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Stage 3-5 embryo hemisphere centered around the pole opposite the embryonic pharynx."; "PMID:28072387" . a owl:Class; rdfs:subClassOf , , _:68755a, _:68756a, _:68757a, _:68758a, _:68759a, _:6875aa, _:6875ba, _:6875ca; "The single, central gut branch of the triclad gut anterior to the pharynx."; ; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "PMID:21664348", "PMID:3490491"; "Planarian_Anatomy"; rdfs:label "anterior primary gut branch" . _:68755a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68756a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68757a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68758a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68759a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6875aa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6875ba a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6875ca a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6875da a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "The single, central gut branch of the triclad gut anterior to the pharynx."; "PMID:3490491" . _:6875ea a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget ; rdfs:comment "Depicted by field contains hematoxylin and eosin staining section of a asexual adult animal. Anterior primary gut branch indicated by arrows. Scale bar = 250um" . a owl:Class; owl:equivalentClass _:6875fa; rdfs:subClassOf , _:68764a, _:68765a; "Region along the edge of the animal where the dorsal and ventral surfaces meet."; ; "D/V boundary", "DV border", "DV boundary", "DV domain", "DV margin", "body edge", "body margin", "body periphery", "dorsal ventral boundary", "dorsal-ventral boundary", "dorsal/ventral compartment boundary of whole organism", "dorsoventral margin", "edge"; "Planarian_Anatomy"; "PLANA:0000043"; rdfs:label "dorsal ventral margin of the whole animal" . _:6875fa a owl:Class; owl:intersectionOf _:68761a . _:68761a rdf:first _:68760a; rdf:rest _:68763a . _:68760a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68763a rdf:first _:68762a; rdf:rest rdf:nil . _:68762a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68764a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68765a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68766a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Region along the edge of the animal where the dorsal and ventral surfaces meet."; "ISBN:9780070316607", "PMID:17905225", "PMID:19174194", "PMID:20865784", "PMID:21295481", "PMID:21295483", "PMID:21458439", "PMID:22549959", "PMID:22696458", "PMID:24415944", "PMID:26457503", "PMID:28216315", "PMID:29357350", "PMID:29674431", "PMID:29674432", "PMID:30399335", "PMID:30485821" . a owl:Class; rdfs:subClassOf , , _:68767a, _:68768a, _:68769a, _:6876aa, _:6876ba, _:6876ca, _:6876da, _:6876ea, _:6876fa, _:68770a, _:68771a, _:68772a; "The planarian brain, consisting of two bilaterally symmetric lobes occupying a ventral position in the head."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "ISBN:9780070316607", "OCLC:16809160", "PMID:15866156", "PMID:16033796", "PMID:16344473", "PMID:16890156", "PMID:17251262", "PMID:17376870", "PMID:17553481", "PMID:17670787", "PMID:17905225", "PMID:17942485", "PMID:17999079", "PMID:18063755", "PMID:18063757", "PMID:18202849", "PMID:18287199", "PMID:19048075", "PMID:19174194", "PMID:19211673", "PMID:19247960", "PMID:19766622", "PMID:20215344", "PMID:20422023", "PMID:20844018", "PMID:20967238", "PMID:21179478", "PMID:21282632", "PMID:21295481", "PMID:21458439", "PMID:21566195", "PMID:21806978", "PMID:22074376", "PMID:22125640", "PMID:22339734", "PMID:22411224", "PMID:22445864", "PMID:22451003", "PMID:22549959", "PMID:23235145", "PMID:23297191", "PMID:23318635", "PMID:23318641", "PMID:23405188", "PMID:23652002", "PMID:24131630", "PMID:24173799", "PMID:24238224", "PMID:24415944", "PMID:24950970", "PMID:25254346", "PMID:25278423", "PMID:25356635", "PMID:25404302", "PMID:25725068", "PMID:25772472", "PMID:25956527", "PMID:26017970", "PMID:26884331", "PMID:27013241", "PMID:27074666", "PMID:27163480", "PMID:27612382", "PMID:27612384", "PMID:27800171", "PMID:28072387", "PMID:28126842", "PMID:28216315", "PMID:28287248", "PMID:29291974", "PMID:29291981", "PMID:29547123", "PMID:29674431", "PMID:30194301", "PMID:30237141", "UBERON:0000955", "https://doi.org/10.1101/279364"; "bi-lobed brain", "bi-lobed cephalic ganglia", "brain", "cerebral ganglia"; "Planarian_Anatomy"; rdfs:label "cephalic ganglia" . _:68767a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68768a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68769a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6876aa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6876ba a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6876ca a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6876da a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6876ea a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6876fa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68770a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68771a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68772a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , , _:68773a, _:68774a, _:68775a, _:68776a, _:68777a, _:68778a, _:68779a, _:6877aa, _:6877ba, _:6877ca, _:6877da, _:6877ea, _:6877fa, _:68780a; "Body wall muscle fibers arrayed around the dorsoventral axis. Upon regeneration, these are thought to be produced de novo in the blastema."; ; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "PMID:26904543", "https://github.com/obophenotype/planaria-ontology/blob/master/metadata/planarefs/planaref-0000005.md"; "circular muscle fiber"; "Planarian_Anatomy"; rdfs:label "circular muscle cell" . _:68773a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68774a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68775a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68776a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68777a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68778a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68779a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6877aa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6877ba a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6877ca a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6877da a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6877ea a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6877fa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68780a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68781a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Body wall muscle fibers arrayed around the dorsoventral axis. Upon regeneration, these are thought to be produced de novo in the blastema."; "PMID:26904543", "https://github.com/obophenotype/planaria-ontology/blob/master/metadata/planarefs/planaref-0000005.md" . _:68782a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget ; rdfs:comment "Image is an electron micrograph depicting the body wall musculature beneath the dorsal epidermis. The first layer of muscle cells beneath the basal lamina (BL), circular muscle, have been colored and labeled with arrowheads. Circular muscle = magenta; longitudinal muscle = green; diagonal muscle = red. Scale bar is 2um." . a owl:Class; rdfs:subClassOf , , _:68783a; "Pluripotent piwi-1+ stem cells that self-renew, form expanding colonies and produce differentiating daughters that contribute to multiple organ systems. cNeoblasts are predicted to be broadly distributed across the anteroposterior axis of the adult worm."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "PMID:16344473", "PMID:19247960", "PMID:20215344", "PMID:21566185", "PMID:21852957", "PMID:21937596", "PMID:22318224", "PMID:22385657", "PMID:22411224", "PMID:22543868", "PMID:22549959", "PMID:22884275", "PMID:22899852", "PMID:23079596", "PMID:23297191", "PMID:23318641", "PMID:23652002", "PMID:23954785", "PMID:24040508", "PMID:24120894", "PMID:24173799", "PMID:25017721", "PMID:25254346", "PMID:25356635", "PMID:26711341", "PMID:27063937", "PMID:27074666", "PMID:27149082", "PMID:27150006", "PMID:27502555", "PMID:27523733", "PMID:27551436", "PMID:28434803", "PMID:29357350", "PMID:29674431", "PMID:29674432", "PMID:29906446", "PMID:30962434"; "adult pluripotent stem cell", "cNeoblast", "clonogenic stem cell", "pluripotent stem cell"; "Planarian_Anatomy"; rdfs:label "clonogenic neoblast" . _:68783a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68784a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Pluripotent piwi-1+ stem cells that self-renew, form expanding colonies and produce differentiating daughters that contribute to multiple organ systems. cNeoblasts are predicted to be broadly distributed across the anteroposterior axis of the adult worm."; "PMID:21566185" . a owl:Class; rdfs:subClassOf , , _:68785a, _:68786a, _:68787a, _:68788a, _:68789a, _:6878aa, _:6878ba, _:6878ca, _:6878da, _:6878ea, _:6878fa, _:68790a, _:68791a; "Non-ciliated tubules associated with the distal tubules, which cross the basement membrane and terminate in the dorsal epidermis."; ; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "PMID:26057828", "PMID:27068018", "PMID:29674431", "UBERON:0001232"; "collection duct"; "Planarian_Anatomy"; rdfs:label "collecting duct" . _:68785a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68786a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68787a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68788a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68789a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6878aa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6878ba a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6878ca a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6878da a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6878ea a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6878fa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68790a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68791a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68792a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Non-ciliated tubules associated with the distal tubules, which cross the basement membrane and terminate in the dorsal epidermis."; "PMID:26057828" . _:68793a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget ; rdfs:comment "Image is an electron micrograph depicting a collecting duct (arrowheads) passing through the basal lamina (BL). Dorsal is up and the scale bar is 5 um." . a owl:Class; rdfs:subClassOf , , _:68794a, _:68795a, _:68796a, _:68797a, _:68798a, _:68799a, _:6879aa, _:6879ba, _:6879ca, _:6879da, _:6879ea, _:6879fa, _:687a0a; "Body wall muscle fibers arrayed diagonally along the anteroposterior axis."; ; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "ISBN:9780070316607", "PMID:23903188", "PMID:26904543", "PMID:27068018", "PMID:28461239", "PMID:28807897", "PMID:30471994"; "diagonal fiber", "diagonal muscle", "diagonal muscle fiber"; "Planarian_Anatomy"; rdfs:label "diagonal muscle cell" . _:68794a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68795a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68796a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68797a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68798a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68799a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6879aa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6879ba a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6879ca a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6879da a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6879ea a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6879fa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:687a0a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:687a1a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Body wall muscle fibers arrayed diagonally along the anteroposterior axis."; "PMID:26904543" . _:687a2a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget ; rdfs:comment "Image is an electron micrograph depicting the body wall musculature beneath the dorsal epidermis. The third layer of cells beneath the basement membrane, diagonal muscle cells, have been colored and labeled with arrowheads. Circular muscle = magenta; longitudinal muscle = green; diagonal muscle = red. Scale bar is 2um." . a owl:Class; rdfs:subClassOf , _:687a3a, _:687a4a; "Anatomical system that has as its parts the organs devoted to the ingestion, digestion, and assimilation of food and the discharge of residual wastes."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "ISBN:9780070316607", "PMID:15866156", "PMID:16311336", "PMID:16344473", "PMID:17390146", "PMID:17553481", "PMID:17905225", "PMID:18063757", "PMID:18287199", "PMID:19048075", "PMID:19247960", "PMID:19766622", "PMID:19933103", "PMID:20040488", "PMID:20215344", "PMID:20707997", "PMID:21356107", "PMID:21664348", "PMID:21806978", "PMID:22451003", "PMID:22479207", "PMID:23079596", "PMID:24737865", "PMID:24922054", "PMID:25254346", "PMID:25558068", "PMID:26556349", "PMID:27068018", "PMID:27501047", "PMID:29357350", "UBERON:0001007"; "gastrointestinal system", "gastrovascular system"; "Planarian_Anatomy"; rdfs:label "digestive system" . _:687a3a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:687a4a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:687a5a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Anatomical system that has as its parts the organs devoted to the ingestion, digestion, and assimilation of food and the discharge of residual wastes."; "UBERON:0001007" . a owl:Class; rdfs:comment "removing all processes. may bring back if PLANA expanded to cover processes."; rdfs:label "obsolete direct development"; owl:deprecated true . a owl:Class; rdfs:comment "removing all processes. may bring back if PLANA expanded to cover processes."; rdfs:label "obsolete dispersed cleavage"; owl:deprecated true . a owl:Class; rdfs:subClassOf , , _:687a6a, _:687a7a, _:687a8a, _:687a9a, _:687aaa, _:687aba, _:687aca, _:687ada, _:687aea, _:687afa, _:687b0a, _:687b1a, _:687b2a, _:687b3a; "Sinusoidal, non-ciliated tubules connected to proximal tubules within the parenchyma. Tubules are formed via intercellular junctions between two epithelial cells."; ; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "PMID:21828097", "PMID:27068018", "UBERON:0004135"; "Planarian_Anatomy"; rdfs:label "distal tubule" . _:687a6a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:687a7a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:687a8a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:687a9a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:687aaa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:687aba a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:687aca a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:687ada a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:687aea a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:687afa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:687b0a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:687b1a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:687b2a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:687b3a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:687b4a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Sinusoidal, non-ciliated tubules connected to proximal tubules within the parenchyma. Tubules are formed via intercellular junctions between two epithelial cells."; "PMID:21828097" . _:687b5a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget ; rdfs:comment "Depicted by field contains a diagram representing the protonephrida unit (top) as well as a 3D rendering of confocal data depicting the same. In the diagram, terminal flame cells and their corresponding cilia are in blues, the proximal tubule is in reds, the distal tubule is in greens while thecollecting duct is in purple. In the 3D rendering below the cilia (AcTub) are in blue, portions of the proximal tubule (slc6a-13) are in red while the distal tubule (slc6a-12) is in green." . a owl:Class; owl:equivalentClass _:687b6a; rdfs:subClassOf , _:687bba, _:687bca; "Single cell layer of dorsal, post-mitotic, epithelial cells containing the dorsal stripe."; ; "dorsal epithelium", "dorsal region of epidermis"; "Planarian_Anatomy"; "PLANA:0000054"; rdfs:label "dorsal region of the epidermis" . _:687b6a a owl:Class; owl:intersectionOf _:687b8a . _:687b8a rdf:first _:687b7a; rdf:rest _:687baa . _:687b7a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:687baa rdf:first _:687b9a; rdf:rest rdf:nil . _:687b9a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:687bba a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:687bca a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:687bda a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Single cell layer of dorsal, post-mitotic, epithelial cells containing the dorsal stripe."; "ISBN:9780070316607", "PMID:17942485", "PMID:19048075", "PMID:19852954", "PMID:20599901", "PMID:20844018", "PMID:22385657", "PMID:22479207", "PMID:26457503", "PMID:27612382", "PMID:28292427" . _:687bea a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget ; rdfs:comment "Image is an electron micrograph depicting the dorsal epidermis (arrowheads). Also visible in this micrograph, immediately deep to the epidermis is the basal lamina and beneath that is a photoreceptor. Scale bar is 10 um." . a owl:Class; rdfs:subClassOf , , _:687bfa, _:687c0a, _:687c1a, _:687c2a, _:687c3a, _:687c4a, _:687c5a, _:687c6a, _:687c7a, _:687c8a, _:687c9a, _:687caa; "Ciliated epithelial cells along the dorsal midline."; ; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "PMID:17553481"; "racing stripe"; "Planarian_Anatomy"; rdfs:label "dorsal stripe" . _:687bfa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:687c0a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:687c1a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:687c2a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:687c3a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:687c4a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:687c5a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:687c6a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:687c7a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:687c8a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:687c9a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:687caa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:687cba a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Ciliated epithelial cells along the dorsal midline."; "PMID:17553481" . _:687cca a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget ; rdfs:comment "Image is an electron micrograph showing the dorsal side of the head of an adult worm. Arrowheads mark where the ciliated cells of the dorsal stripe can be seen. Anterior is up and scale bar is 100um." . a owl:Class; rdfs:subClassOf ; "Turbellarian (freshwater flatworm) embryos that undergo a modified form of cleavage due to separation of oocyte and yolk. Yolk is not contained within oocytes, and is produced by somatic vitellogenic gland cells."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "PMID:22074376", "PMID:27149082", "https://github.com/obophenotype/planaria-ontology/blob/master/metadata/planarefs/planaref-0000002.md"; "Planarian_Anatomy"; rdfs:label "ectolecithal embryo" . _:687cda a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Turbellarian (freshwater flatworm) embryos that undergo a modified form of cleavage due to separation of oocyte and yolk. Yolk is not contained within oocytes, and is produced by somatic vitellogenic gland cells."; "PMID:22074376", "PMID:27149082", "https://github.com/obophenotype/planaria-ontology/blob/master/metadata/planarefs/planaref-0000002.md" . a owl:Class; rdfs:comment "removing all processes. may bring back if PLANA expanded to cover processes."; rdfs:label "obsolete embryonic cleavage"; owl:deprecated true . a owl:Class; rdfs:subClassOf , , _:687cea, _:687cfa, _:687d0a, _:687d1a, _:687d2a, _:687d3a, _:687d4a, _:687d5a; "A cryptic digestive system in Stage 3-6 embryos comprised of temporary embryonic cell types and organs, including the embryonic pharynx and primitive gut cells. Embryonic gut cells, likely produced from blastomeres, form a phagocytic tissue layer surrounding the inner gut cavity during Stages 4-6. It is not known whether the embryonic gut is temporary embryonic tissue or a definitive tissue. For convenience, the embryonic gut is currently designated as an extraembryonic structure because cell type specific markers for the embryonic gut do not stain the definitive gut in hatchlings or adult animals."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "PMID:28072387", "UBERON:6001842"; "Planarian_Anatomy"; rdfs:label "embryonic digestive system" . _:687cea a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:687cfa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:687d0a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:687d1a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:687d2a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:687d3a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:687d4a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:687d5a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:687d6a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "A cryptic digestive system in Stage 3-6 embryos comprised of temporary embryonic cell types and organs, including the embryonic pharynx and primitive gut cells. Embryonic gut cells, likely produced from blastomeres, form a phagocytic tissue layer surrounding the inner gut cavity during Stages 4-6. It is not known whether the embryonic gut is temporary embryonic tissue or a definitive tissue. For convenience, the embryonic gut is currently designated as an extraembryonic structure because cell type specific markers for the embryonic gut do not stain the definitive gut in hatchlings or adult animals."; "PMID:28072387" . a owl:Class; rdfs:subClassOf , , _:687d7a, _:687d8a, _:687d9a, _:687daa, _:687dba, _:687dca, _:687dda, _:687dea, _:687dfa; "Dispersed, phagocytic gut cells that appear during Stage 4 and ultimately generate a honeycomb-like lattice surrounding the central gut cavity in Stage 5 embryos. Early embryonic gut cell specific transcripts are expressed from Stage 4-6, and are downregulated during Stage 7."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "PMID:28072387"; "Planarian_Anatomy"; rdfs:label "embryonic gut cell" . _:687d7a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:687d8a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:687d9a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:687daa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:687dba a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:687dca a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:687dda a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:687dea a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:687dfa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:687e0a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Dispersed, phagocytic gut cells that appear during Stage 4 and ultimately generate a honeycomb-like lattice surrounding the central gut cavity in Stage 5 embryos. Early embryonic gut cell specific transcripts are expressed from Stage 4-6, and are downregulated during Stage 7."; "PMID:28072387" . a owl:Class; rdfs:subClassOf , , _:687e1a, _:687e2a, _:687e3a, _:687e4a, _:687e5a; "The parenchymal space between the gut cavity and the primitive ectoderm containing undifferentiated blastomeres in Stage 3-5 embryos."; ; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "OCLC:16809160", "PMID:12888018", "PMID:28072387"; "Planarian_Anatomy"; rdfs:label "embryonic wall" . _:687e1a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:687e2a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:687e3a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:687e4a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:687e5a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:687e6a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "The parenchymal space between the gut cavity and the primitive ectoderm containing undifferentiated blastomeres in Stage 3-5 embryos."; "OCLC:16809160", "PMID:12888018" . _:687e7a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget ; rdfs:comment "Depicted by field contains hematoxylin and eosin staining section of a stage 5 embryo with anatomical feature noted with black indicators." . a owl:Class; rdfs:subClassOf , , _:687e8a, _:687e9a, _:687eaa, _:687eba, _:687eca, _:687eda, _:687eea, _:687efa, _:687f0a, _:687f1a, _:687f2a, _:687f3a, _:687f4a, _:687f5a; "Visceral muscle surrounding the gut."; ; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "PMID:21664348", "PMID:22411224", "PMID:23079596", "PMID:26904543", "PMID:30471994", "PMID:30962434", "UBERON:2001324"; "enteric muscle", "intestinal muscle"; "Planarian_Anatomy"; rdfs:label "enteric musculature" . _:687e8a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:687e9a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:687eaa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:687eba a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:687eca a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:687eda a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:687eea a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:687efa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:687f0a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:687f1a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:687f2a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:687f3a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:687f4a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:687f5a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:687f6a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget ; rdfs:comment "Image is an electron micrograph depicting the enteric musculature (arrowheads) surrounding the gut, which extends across the top of the image. These cells are very small compared to the layer of medial muscle underneath them. Scale bar is 1um." . a owl:Class; rdfs:subClassOf , , _:687f7a, _:687f8a, _:687f9a, _:687faa, _:687fba, _:687fca; "Attachment between the triclad gut and the proximal end of the pharynx."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "ISBN:9780070316607", "OCLC:16809160", "PMID:18063757", "PMID:20707997", "PMID:21806978", "PMID:24737865", "PMID:27063937", "PMID:29674431", "PMID:30485821", "UBERON:0001043"; "gut pharynx intersection", "pharynx root", "root of pharynx"; "Planarian_Anatomy"; rdfs:label "esophagus" . _:687f7a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:687f8a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:687f9a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:687faa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:687fba a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:687fca a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf ; "A multicellular anatomical structure that is associated with an embryo and derived from the zygote from which it develops, but which does not contribute to the embryo proper or to structures that are part of the same organism after embryogenesis."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "UBERON:0000478"; "Planarian_Anatomy"; rdfs:label "extraembryonic structure" . _:687fda a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "A multicellular anatomical structure that is associated with an embryo and derived from the zygote from which it develops, but which does not contribute to the embryo proper or to structures that are part of the same organism after embryogenesis."; "UBERON:0000478" . a owl:Class; rdfs:subClassOf , , _:687fea, _:687ffa, _:68800a, _:68801a, _:68802a, _:68803a, _:68804a, _:68805a, _:68806a, _:68807a, _:68808a, _:68809a; "Terminal structure of protonephridia unit; consists of flame cells."; ; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "PMID:21828097", "PMID:26057828"; "Planarian_Anatomy"; rdfs:label "flame bulb" . _:687fea a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:687ffa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68800a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68801a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68802a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68803a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68804a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68805a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68806a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68807a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68808a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68809a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6880aa a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget ; rdfs:comment "Image is an electron micrograph depicting a flame cell (outlined), which is a part of the flame bulb. \"N\" marks this cell's nucleus and the cilia are noted by an arrowhead. Scale bar is 1um." . a owl:Class; rdfs:subClassOf , , _:6880ba, _:6880ca, _:6880da, _:6880ea, _:6880fa, _:68810a, _:68811a, _:68812a, _:68813a, _:68814a, _:68815a, _:68816a, _:68817a; "Terminal structure of the protonephridia unit, capping the proximal tubules. Flame cells are defined by the filtration weir‚ or filtration diaphragm, which consists of closely apposed strands of cytoplasm surrounding a central cilia bundle, and by numerous microvilli between weir and cilia. Positive for acetyated tubulin."; ; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "ISBN:9780070316607", "OCLC:16809160", "PMID:17670787", "PMID:19247960", "PMID:19852954", "PMID:21828097", "PMID:21937596", "PMID:24523458", "PMID:26057828", "PMID:26711341", "PMID:27068018", "PMID:27542689", "PMID:29674431", "PMID:29674432"; "Planarian_Anatomy"; rdfs:label "flame cell" . _:6880ba a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6880ca a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6880da a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6880ea a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6880fa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68810a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68811a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68812a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68813a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68814a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68815a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68816a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68817a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68818a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Terminal structure of the protonephridia unit, capping the proximal tubules. Flame cells are defined by the filtration weir‚ or filtration diaphragm, which consists of closely apposed strands of cytoplasm surrounding a central cilia bundle, and by numerous microvilli between weir and cilia. Positive for acetyated tubulin."; "OCLC:16809160", "PMID:21828097", "PMID:26057828" . _:68819a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget ; rdfs:comment "Image is an electron micrograph depicting a flame cell (outlined), which is a part of the flame bulb. \"N\" marks this cell's nucleus and the cilia are noted by an arrowhead. Scale bar is 1um." . a owl:Class; rdfs:subClassOf , , _:6881aa, _:6881ba, _:6881ca, _:6881da, _:6881ea, _:6881fa, _:68820a, _:68821a, _:68822a, _:68823a, _:68824a, _:68825a, _:68826a, _:68827a; "The single cell layer columnar epithelial lining of the intestine. The gastrodermis is surrounded by a basal lamina and enteric muscle."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "BTO:0000509", "ISBN:9780070316607", "PMID:21282632", "PMID:21664348", "PMID:24120894", "PMID:25558068", "PMID:27441386", "PMID:27501047", "PMID:28287248", "PMID:30608231"; "gut epithelia", "gut epithelium", "intestinal epithelium"; "Planarian_Anatomy"; rdfs:label "gastrodermis" . _:6881aa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6881ba a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6881ca a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6881da a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6881ea a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6881fa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68820a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68821a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68822a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68823a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68824a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68825a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68826a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68827a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68828a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "The single cell layer columnar epithelial lining of the intestine. The gastrodermis is surrounded by a basal lamina and enteric muscle."; "PMID:3490491" . a owl:Class; rdfs:subClassOf , , _:68829a, _:6882aa, _:6882ba, _:6882ca, _:6882da, _:6882ea, _:6882fa, _:68830a, _:68831a, _:68832a, _:68833a, _:68834a, _:68835a; "Secretory cells that release digestive enzymes into the lumen of the intestine."; ; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "BTO:0001540", "PMID:20865784", "PMID:21664348", "PMID:23079596", "PMID:27501047", "PMID:28137894", "PMID:28287248", "PMID:29674431", "PMID:29674432"; "Planarian_Anatomy"; rdfs:label "goblet cell" . _:68829a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6882aa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6882ba a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6882ca a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6882da a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6882ea a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6882fa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68830a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68831a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68832a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68833a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68834a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68835a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68836a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Secretory cells that release digestive enzymes into the lumen of the intestine."; "PMID:3490491" . _:68837a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget ; rdfs:comment "Image is an electron micrograph showing part of the gastrodermis. A goblet cell, a type of gastrodermal cell is labeled with arrowheads. Note the large, dark mucus granules contained in the cell body. The lumen of the gut can be seen on the right side of the image and has been labeled with \"L.\" Scale bar is 1 um." . a owl:Class; rdfs:subClassOf , , _:68838a, _:68839a, _:6883aa, _:6883ba, _:6883ca, _:6883da, _:6883ea, _:6883fa; "Cavity encompassed by the embryonic digestive tract, prior to formation of the branched defintive gut."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "PMID:28072387"; "Planarian_Anatomy"; rdfs:label "embryonic gut cavity" . _:68838a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68839a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6883aa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6883ba a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6883ca a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6883da a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6883ea a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6883fa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68840a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Cavity encompassed by the embryonic digestive tract, prior to formation of the branched defintive gut."; "PMID:28072387" . a owl:Class; rdfs:subClassOf , , _:68841a, _:68842a, _:68843a, _:68844a, _:68845a, _:68846a, _:68847a, _:68848a, _:68849a, _:6884aa, _:6884ba, _:6884ca, _:6884da; "Inner most body wall muscle fibers arrayed along the anteroposterior axis. These fibers are thicker than the outer longitudinal muscle fibers. The pattern of these muscles differs along the dorsoventral axis, with the dorsal arrangement converging at the central zone of the anterior pole. The ventral arrangement is more parallel or may diverge slightly as it approaches the ventral pole."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "ISBN:9780070316607", "PMID:26904543", "PMID:30962434", "https://github.com/obophenotype/planaria-ontology/blob/master/metadata/planarefs/planaref-0000003.md"; "inner longitudinal muscle fiber", "inner longitudinal muscle layer"; "Planarian_Anatomy"; rdfs:label "inner longitudinal muscle cell" . _:68841a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68842a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68843a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68844a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68845a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68846a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68847a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68848a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68849a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6884aa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6884ba a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6884ca a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6884da a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6884ea a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Inner most body wall muscle fibers arrayed along the anteroposterior axis. These fibers are thicker than the outer longitudinal muscle fibers. The pattern of these muscles differs along the dorsoventral axis, with the dorsal arrangement converging at the central zone of the anterior pole. The ventral arrangement is more parallel or may diverge slightly as it approaches the ventral pole."; "PMID:26904543", "https://github.com/obophenotype/planaria-ontology/blob/master/metadata/planarefs/planaref-0000003.md" . a owl:Class; rdfs:subClassOf , , _:6884fa, _:68850a, _:68851a, _:68852a, _:68853a, _:68854a, _:68855a, _:68856a, _:68857a, _:68858a, _:68859a, _:6885aa, _:6885ba; "Absorptive digestive cells that engulf food particles for intracellular digestion."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "PMID:19933103", "PMID:21664348", "PMID:23079596", "PMID:27542689", "PMID:28072387", "PMID:29674431", "PMID:29674432"; "enterocyte", "gut enterocyte", "gut phagocyte", "intestinal epithelial cell"; "Planarian_Anatomy"; rdfs:label "intestinal phagocyte" . _:6884fa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68850a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68851a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68852a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68853a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68854a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68855a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68856a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68857a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68858a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68859a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6885aa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6885ba a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6885ca a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Absorptive digestive cells that engulf food particles for intracellular digestion."; "PMID:3490491" . a owl:Class; rdfs:subClassOf , _:6885da; "Body wall muscle fibers arrayed along the anteroposterior axis. Upon regeneration, these muscles are thought to be established from truncated pre-existing fibers.Inner most body wall muscle fibers arrayed along the anteroposterior axis. These fibers are thicker than the outer longitudinal muscle fibers. The pattern of these muscles differs along the dorsoventral axis, with the dorsal arrangement converging at the central zone of the anterior pole. The ventral arrangement is more parallel or may diverge slightly as it approaches the ventral pole."; ; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "ISBN:9780070316607", "PMID:23903188", "PMID:26904543", "PMID:27551436", "PMID:28461239", "PMID:28807897", "PMID:30471994", "https://github.com/obophenotype/planaria-ontology/blob/master/metadata/planarefs/planaref-0000005.md"; "BW longitudinal fiber", "body wall longitudinal fiber", "longitudinal fiber", "longitudinal muscle", "longitudinal muscle cell", "longitudinal muscle fiber"; "Planarian_Anatomy"; rdfs:label "longitudinal muscle cell" . _:6885da a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6885ea a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Body wall muscle fibers arrayed along the anteroposterior axis. Upon regeneration, these muscles are thought to be established from truncated pre-existing fibers.Inner most body wall muscle fibers arrayed along the anteroposterior axis. These fibers are thicker than the outer longitudinal muscle fibers. The pattern of these muscles differs along the dorsoventral axis, with the dorsal arrangement converging at the central zone of the anterior pole. The ventral arrangement is more parallel or may diverge slightly as it approaches the ventral pole."; "PMID:26904543", "https://github.com/obophenotype/planaria-ontology/blob/master/metadata/planarefs/planaref-0000005.md" . _:6885fa a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget ; rdfs:comment "Image is an electron micrograph depicting the body wall musculature beneath the dorsal epidermis. The longitudinal muscle cells (arrowheads) sit behind both the circular muscle and the diagonal muscle. Circular muscle = magenta; longitudinal muscle = green; diagonal muscle = red. Scale bar is 2um." . a owl:Class; rdfs:subClassOf , , _:68860a, _:68861a, _:68862a, _:68863a, _:68864a, _:68865a, _:68866a, _:68867a, _:68868a, _:68869a, _:6886aa; "The sole point of entry and exit for the Triclad planarian flatworm gut. The mouth is connected to the pharyngeal pouch to allow for exit and re-entry of the pharynx on the ventral side of the animal. The mouth contains several cell types, including epithelial cells, muscle, and secretory cells."; ; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "ISBN:9780070316607", "OCLC:16809160", "PMID:17251262", "PMID:17905225", "PMID:18287199", "PMID:19174194", "PMID:19211673", "PMID:20707997", "PMID:21295481", "PMID:21458439", "PMID:21806978", "PMID:23954785", "PMID:26457503", "PMID:26556349", "PMID:27034770", "PMID:27063937", "PMID:27074666", "PMID:27122174", "PMID:28807897", "PMID:29674431", "PMID:30399335", "PMID:30471994", "PMID:30485821", "UBERON:0000165"; "anus", "manus"; "Planarian_Anatomy"; rdfs:label "mouth" . _:68860a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68861a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68862a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68863a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68864a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68865a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68866a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68867a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68868a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68869a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6886aa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6886ba a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "The sole point of entry and exit for the Triclad planarian flatworm gut. The mouth is connected to the pharyngeal pouch to allow for exit and re-entry of the pharynx on the ventral side of the animal. The mouth contains several cell types, including epithelial cells, muscle, and secretory cells."; "OCLC:16809160" . _:6886ca a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget ; rdfs:comment "Image is an electron micrograph of the mouth (arrowheads), which is located on the ventral side of the animal. Note the heavily ciliated pharynx that is peeking out. Scale bar is 10um." . a owl:Class; rdfs:subClassOf , , _:6886da, _:6886ea, _:6886fa, _:68870a, _:68871a, _:68872a; "A female germ cell that has entered meiosis."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "CL:0000023", "PMID:25278423", "PMID:27149082", "PMID:27163480", "PMID:27304889", "PMID:27330085", "PMID:27501047", "PMID:28072387", "PMID:28434803", "PMID:28812561"; "egg", "female gamete", "ovum"; "Planarian_Anatomy"; rdfs:label "oocyte" . _:6886da a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6886ea a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6886fa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68870a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68871a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68872a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68873a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "A female germ cell that has entered meiosis."; "CL:0000023" . a owl:Class; rdfs:subClassOf , , _:68874a, _:68875a, _:68876a, _:68877a, _:68878a, _:68879a, _:6887aa . _:68874a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68875a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68876a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68877a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68878a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68879a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6887aa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . rdfs:subClassOf _:6887ba, _:6887ca, _:6887da; "A portion of the eye containing pigment cells and dendritic projections from photoreceptor neurons."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "ISBN:9780070316607", "PMID:15866156", "PMID:20707997", "PMID:20865784", "PMID:21458439", "PMID:21828097", "PMID:21852957", "PMID:22411224", "PMID:22427692", "PMID:22445864", "PMID:22549959", "PMID:22884275", "PMID:25493551", "PMID:26017970", "PMID:26618653", "PMID:27068018", "PMID:27240733", "PMID:27542689", "PMID:27606067", "PMID:27800171", "PMID:28495872", "PMID:29547123", "PMID:30143032", "PMID:30194301", "UBERON:0003072"; "eye cup", "photoreceptor pigment cup", "photoreceptor pigmentation", "pigment cup", "pigmented cell cup", "pigmented optic cup"; "Planarian_Anatomy"; rdfs:label "optic cup" . _:6887ba a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6887ca a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6887da a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6887ea a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "A portion of the eye containing pigment cells and dendritic projections from photoreceptor neurons."; "PMID:21852957", "PMID:22884275" . a owl:Class; rdfs:subClassOf , , _:6887fa, _:68880a, _:68881a, _:68882a, _:68883a, _:68884a; "Stage 3-5 embryo hemisphere centered around the embryonic pharynx."; ; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "PMID:28072387"; "Planarian_Anatomy"; rdfs:label "oral hemisphere" . _:6887fa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68880a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68881a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68882a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68883a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68884a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68885a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Stage 3-5 embryo hemisphere centered around the embryonic pharynx."; "PMID:28072387" . _:68886a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget ; rdfs:comment "Illustration of the oral hemispshere (in green)." . a owl:Class; rdfs:subClassOf , , _:68887a, _:68888a, _:68889a, _:6888aa, _:6888ba, _:6888ca, _:6888da, _:6888ea, _:6888fa, _:68890a, _:68891a, _:68892a, _:68893a; "Body wall muscle fibers arrayed along the anteroposterior axis. Upon regeneration, these muscles are thought to be established from truncated pre-existing fibers."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "ISBN:9780070316607", "PMID:26904543", "https://github.com/obophenotype/planaria-ontology/blob/master/metadata/planarefs/planaref-0000005.md"; "outer longitudinal muscle layer"; "Planarian_Anatomy"; rdfs:label "outer longitudinal muscle cell" . _:68887a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68888a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68889a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6888aa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6888ba a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6888ca a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6888da a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6888ea a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6888fa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68890a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68891a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68892a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68893a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68894a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Body wall muscle fibers arrayed along the anteroposterior axis. Upon regeneration, these muscles are thought to be established from truncated pre-existing fibers."; "PMID:26904543", "https://github.com/obophenotype/planaria-ontology/blob/master/metadata/planarefs/planaref-0000005.md" . a owl:Class; rdfs:subClassOf , , _:68895a, _:68896a, _:68897a, _:68898a, _:68899a, _:6889aa, _:6889ba, _:6889ca, _:6889da, _:6889ea, _:6889fa, _:688a0a, _:688a1a; "Muscles that are present through the mesenchyme, inclusing dorsal-ventral muscles, intestinal muscles and pharynx muscles."; ; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "ISBN:9780070316607", "OCLC:16809160", "PMID:30962434"; "dorsoventral muscle fibers", "parenchymal muscle"; "Planarian_Anatomy"; rdfs:label "parenchymal musculature" . _:68895a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68896a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68897a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68898a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68899a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6889aa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6889ba a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6889ca a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6889da a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6889ea a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6889fa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:688a0a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:688a1a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:688a2a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Muscles that are present through the mesenchyme, inclusing dorsal-ventral muscles, intestinal muscles and pharynx muscles."; "OCLC:16809160" . _:688a3a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget ; rdfs:comment "Image is an electron micrograph of the parenchyma. Three muscle cells have been notated with an arrowhead. Scale bar is 2 um." . a owl:Class; rdfs:subClassOf ; "A major division of the nervous system that contains nerves which connect the central nervous system (CNS) with sensory organs, other organs, muscles, blood vessels and glands."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "PMID:20967238", "PMID:22339734", "PMID:23903188", "PMID:26017970", "PMID:26884331", "PMID:27150006", "PMID:27612382", "PMID:29674431", "UBERON:0000010"; "Planarian_Anatomy"; rdfs:label "peripheral nervous system" . _:688a4a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "A major division of the nervous system that contains nerves which connect the central nervous system (CNS) with sensory organs, other organs, muscles, blood vessels and glands."; "UBERON:0000010" . a owl:Class; rdfs:subClassOf , , _:688a5a, _:688a6a, _:688a7a, _:688a8a, _:688a9a, _:688aaa; "An epithelial structure housing the pharynx, connected to the esophagus and mouth."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "OCLC:16809160"; "pharyngeal pocket", "pharyngeal pouch"; "Planarian_Anatomy"; rdfs:label "pharynx pouch" . _:688a5a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:688a6a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:688a7a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:688a8a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:688a9a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:688aaa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:688aba a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "An epithelial structure housing the pharynx, connected to the esophagus and mouth."; "OCLC:16809160" . a owl:Class; rdfs:comment "racing stripe is now a synonym of PLANA:0000055 dorsal stripe"; rdfs:label "obsolete racing stripe"; owl:deprecated true . a owl:Class; rdfs:subClassOf , , _:688aca, _:688ada, _:688aea, _:688afa, _:688b0a, _:688b1a, _:688b2a, _:688b3a; "The primary gut branches of the triclad gut lateral and posterior to the pharynx and pharyngeal pouch."; ; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "PMID:21664348", "PMID:23318641", "PMID:24063805"; "major posterior gut branch", "primary posterior intestinal branch"; "Planarian_Anatomy"; rdfs:label "posterior primary gut branch" . _:688aca a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:688ada a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:688aea a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:688afa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:688b0a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:688b1a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:688b2a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:688b3a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:688b4a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "The primary gut branches of the triclad gut lateral and posterior to the pharynx and pharyngeal pouch."; "PMID:3490491" . _:688b5a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget ; rdfs:comment "Depicted by field contains hematoxylin and eosin staining section of a asexual adult animal. The posterior primary gut branch is indicated by arrows. Scale bar = 250um" . a owl:Class; rdfs:subClassOf , , _:688b6a, _:688b7a, _:688b8a, _:688b9a, _:688baa, _:688bba, _:688bca, _:688bda; "A phagocytic cell closely associated with the embryonic pharynx."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "PMID:28072387"; "Planarian_Anatomy"; rdfs:label "primitive gut cell" . _:688b6a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:688b7a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:688b8a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:688b9a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:688baa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:688bba a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:688bca a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:688bda a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:688bea a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "A phagocytic cell closely associated with the embryonic pharynx."; "PMID:28072387" . a owl:Class; rdfs:comment "removing all processes. may bring back if PLANA expanded to cover processes."; rdfs:label "obsolete protosphere"; owl:deprecated true . a owl:Class; rdfs:subClassOf , , _:688bfa, _:688c0a, _:688c1a, _:688c2a, _:688c3a, _:688c4a, _:688c5a, _:688c6a, _:688c7a, _:688c8a, _:688c9a, _:688caa, _:688cba, _:688cca, _:688cda, _:688cea, _:688cfa, _:688d0a, _:688d1a; "Ciliated epithelial cells form tubules, generating coiled, branching units terminating in flame bulbs. Tubules are formed via intercellular junctions between two epithelial cells. Proximal tubules are connected to non-ciliated distal tubules within the parenchyma."; ; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "PMID:21828097", "PMID:21937596", "PMID:26057828", "PMID:27068018", "UBERON:0004134"; "Planarian_Anatomy"; rdfs:label "proximal tubule" . _:688bfa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:688c0a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:688c1a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:688c2a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:688c3a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:688c4a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:688c5a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:688c6a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:688c7a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:688c8a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:688c9a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:688caa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:688cba a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:688cca a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:688cda a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:688cea a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:688cfa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:688d0a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:688d1a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:688d2a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Ciliated epithelial cells form tubules, generating coiled, branching units terminating in flame bulbs. Tubules are formed via intercellular junctions between two epithelial cells. Proximal tubules are connected to non-ciliated distal tubules within the parenchyma."; "PMID:21828097" . _:688d3a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget ; rdfs:comment "Image is an electron micrograph depicting a proximal tubule (arrowheads) of the protonephridia structure. Note the cilia and the characteristic way the cell membrane connects with other proximal tubule epithelial cells. Scale bar is 2um." . a owl:Class; rdfs:subClassOf , _:688d4a, _:688d5a; "The renal system is an anatomical system that maintains fluid balance and contributes to electrolyte balance, acid/base balance, and disposal of nitrogenous waste products."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "ISBN:9780070316607", "PMID:17670787", "PMID:19048075", "PMID:19247960", "PMID:19852954", "PMID:20707997", "PMID:21828097", "PMID:21937596", "PMID:22427692", "PMID:23079596", "PMID:23235145", "PMID:23903188", "PMID:24173799", "PMID:24523458", "PMID:24737865", "PMID:25254346", "PMID:26057828", "PMID:26711341", "PMID:27068018", "PMID:27542689", "PMID:28461239", "PMID:29674431", "PMID:30297872", "UBERON:0001008"; "excretory system", "protonephridial system"; "Planarian_Anatomy"; rdfs:label "renal system" . _:688d4a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:688d5a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:688d6a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "The renal system is an anatomical system that maintains fluid balance and contributes to electrolyte balance, acid/base balance, and disposal of nitrogenous waste products."; "UBERON:0001008" . a owl:Class; rdfs:subClassOf ; "Gut branches, originating from and connected to the primary gut branches, that extend laterally towards the body edge."; ; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "PMID:21664348", "PMID:27122174", "PMID:28287248", "PMID:30471994"; "Planarian_Anatomy"; rdfs:label "secondary gut branch" . _:688d7a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Gut branches, originating from and connected to the primary gut branches, that extend laterally towards the body edge."; "PMID:3490491" . _:688d8a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget ; rdfs:comment "Depicted by field contains hematoxylin and eosin staining section of a asexual adult animal. The secondary gut branch is indicated by arrows. Scale bar = 250um" . a owl:Class; rdfs:subClassOf , , _:688d9a, _:688daa, _:688dba, _:688dca, _:688dda, _:688dea, _:688dfa, _:688e0a, _:688e1a, _:688e2a; "A mature male germ cell that develops from a spermatid."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "CL:0000019", "PMID:17390146", "PMID:20844018", "PMID:22074376", "PMID:25278423", "PMID:27149082", "PMID:27163480", "PMID:27304889", "PMID:28072387", "PMID:29095551", "https://doi.org/10.1101/279364"; "mature sperm", "spermatozoa"; "Planarian_Anatomy"; rdfs:label "sperm" . _:688d9a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:688daa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:688dba a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:688dca a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:688dda a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:688dea a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:688dfa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:688e0a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:688e1a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:688e2a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:688e3a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "A mature male germ cell that develops from a spermatid."; "CL:0000019" . a owl:Class; rdfs:comment "removing all processes. may bring back if PLANA expanded to cover processes."; rdfs:label "obsolete sphere formation"; owl:deprecated true . a owl:Class; rdfs:subClassOf , , _:688e4a, _:688e5a, _:688e6a, _:688e7a, _:688e8a; "Fused yolk cells surrounding blastomeres undergoing dispersed cleavage during Stages 1 and 2."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "PMID:15599763"; "syncytial yolk cell"; "Planarian_Anatomy"; rdfs:label "yolk syncytium" . _:688e4a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:688e5a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:688e6a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:688e7a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:688e8a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:688e9a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Fused yolk cells surrounding blastomeres undergoing dispersed cleavage during Stages 1 and 2."; "PMID:15599763" . a owl:Class; rdfs:subClassOf ; "Gut branches originating from and connected to the secondary gut branches."; ; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "PMID:21664348", "PMID:23250205", "PMID:27122174", "PMID:28137894", "PMID:28287248", "PMID:30194301", "PMID:30471994"; "tertiary branch", "tertiary intestinal branch"; "Planarian_Anatomy"; rdfs:label "tertiary gut branch" . _:688eaa a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Gut branches originating from and connected to the secondary gut branches."; "PMID:3490491" . _:688eba a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget ; rdfs:comment "Depicted by field contains hematoxylin and eosin staining section of a asexual adult animal. The tertiary gut branch indicated is by arrows. Scale bar = 250um" . a owl:Class; rdfs:comment "removing all processes. may bring back if PLANA expanded to cover processes."; rdfs:label "obsolete tissue morphogenesis"; owl:deprecated true . a owl:Class; rdfs:subClassOf , _:688eca, _:688eda; "Ovo+ neoblasts and post-mitotic eye progenitors that simultaneously migrate and differentiate into photoreceptor neurons and non-neuronal pigment cup cells comprising the optic cup."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "PMID:21852957", "PMID:22884275", "PMID:23250205", "PMID:24040508", "PMID:27606067", "PMID:28072387", "PMID:28245923", "PMID:29674431", "PMID:30485821"; "eye progenitor", "eye progenitor cell", "ovo+ eye progenitor"; "Planarian_Anatomy"; rdfs:label "trail cell" . _:688eca a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:688eda a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:688eea a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Ovo+ neoblasts and post-mitotic eye progenitors that simultaneously migrate and differentiate into photoreceptor neurons and non-neuronal pigment cup cells comprising the optic cup."; "PMID:22884275" . a owl:Class; owl:equivalentClass _:688efa; rdfs:subClassOf , _:688f4a, _:688f5a; "Single cell layer of ventral, post-mitotic, heavily ciliated epithelial cells"; "cilated ventral epidermis", "ciliated ventral epithelium", "ventral epidermin", "ventral epithelia", "ventral epithelium", "ventral region of epidermis"; "Planarian_Anatomy"; "PLANA:0000096"; rdfs:label "ventral epidermis" . _:688efa a owl:Class; owl:intersectionOf _:688f1a . _:688f1a rdf:first _:688f0a; rdf:rest _:688f3a . _:688f0a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:688f3a rdf:first _:688f2a; rdf:rest rdf:nil . _:688f2a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:688f4a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:688f5a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:688f6a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Single cell layer of ventral, post-mitotic, heavily ciliated epithelial cells"; "ISBN:9780070316607", "PMID:15866156", "PMID:17942485", "PMID:19852954", "PMID:20599901", "PMID:21282632", "PMID:23144623", "PMID:23903188", "PMID:24523458", "PMID:25017721", "PMID:26457503", "PMID:26912790", "PMID:27068018", "PMID:28292427", "PMID:29100657", "PMID:30383829", "PMID:30962434" . a owl:Class; rdfs:subClassOf , , _:688f7a, _:688f8a, _:688f9a, _:688faa, _:688fba, _:688fca, _:688fda, _:688fea, _:688ffa, _:68900a, _:68901a, _:68902a, _:68903a, _:68904a; "The pair of closely united ventral longitudinal nerves with their segmental ganglia that is characteristic of many elongate invertebrates (as earthworms)[BTO]. A large process bundle that runs along the vental mid-line extending from the ventral region of the nerve ring[WB]. The ventral cord is one of the distinguishing traits of the central nervous system of all arthropods (such as insects, crustaceans and arachnids) as well as many other invertebrates, such as the annelid worms[GO]."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "BTO:0002328", "EFO:0000896", "FBbt:00001102", "ISBN:9780070316607", "MAT:0000339", "MIAA:0000339", "PMID:16033796", "PMID:16890156", "PMID:17251262", "PMID:17390146", "PMID:17553481", "PMID:17905225", "PMID:18063755", "PMID:18063757", "PMID:18202849", "PMID:18287199", "PMID:19174194", "PMID:19211673", "PMID:19247960", "PMID:20215344", "PMID:20223763", "PMID:20422023", "PMID:20599901", "PMID:20707997", "PMID:20967238", "PMID:21179478", "PMID:21282632", "PMID:21566185", "PMID:21806978", "PMID:21828097", "PMID:22074376", "PMID:22125640", "PMID:22339734", "PMID:22479207", "PMID:23250205", "PMID:23297191", "PMID:23318635", "PMID:23954785", "PMID:24063805", "PMID:24120894", "PMID:24131630", "PMID:24173799", "PMID:24950970", "PMID:25254346", "PMID:25356635", "PMID:25558068", "PMID:25772472", "PMID:25956527", "PMID:26017970", "PMID:26062938", "PMID:26457503", "PMID:26556349", "PMID:27013241", "PMID:27034770", "PMID:27150006", "PMID:27163480", "PMID:27612382", "PMID:28072387", "PMID:28126842", "PMID:28245923", "PMID:28807897", "PMID:29291974", "PMID:29674431", "PMID:30143032", "PMID:30471994", "UBERON:0000934", "WBbt:0005829", "http://en.wikipedia.org/wiki/Ventral:nerve:cord", "nlx:146329"; "VNC", "nerve cord", "ventral cord"; "Planarian_Anatomy"; rdfs:label "ventral nerve cord" . _:688f7a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:688f8a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:688f9a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:688faa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:688fba a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:688fca a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:688fda a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:688fea a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:688ffa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68900a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68901a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68902a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68903a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68904a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68905a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "The pair of closely united ventral longitudinal nerves with their segmental ganglia that is characteristic of many elongate invertebrates (as earthworms)[BTO]. A large process bundle that runs along the vental mid-line extending from the ventral region of the nerve ring[WB]. The ventral cord is one of the distinguishing traits of the central nervous system of all arthropods (such as insects, crustaceans and arachnids) as well as many other invertebrates, such as the annelid worms[GO]."; "UBERON:0000934" . a owl:Class; rdfs:subClassOf , , _:68906a, _:68907a, _:68908a; "Diploid cell resulting from the fusion of male and female gametes at fertilization. [The_Dictionary_of_Cell_and_Molecular_Biology:Third_Edition ]."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "BTO:0000854", "CL:0000365", "PMID:28812561", "UBERON:0000106"; "Planarian_Anatomy"; rdfs:label "zygote" . _:68906a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68907a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68908a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68909a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Diploid cell resulting from the fusion of male and female gametes at fertilization. [The_Dictionary_of_Cell_and_Molecular_Biology:Third_Edition ]."; "CL:0000365" . a owl:Class; rdfs:subClassOf ; "The basic cellular unit of nervous tissue. Each neuron consists of a body, an axon, and dendrites. Their purpose is to receive, conduct, and transmit impulses in the nervous system."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "BTO:0000938", "CL:0000540", "NCIT:C12623", "PMID:16033796", "PMID:16890156", "PMID:17553481", "PMID:17905225", "PMID:18202849", "PMID:18287199", "PMID:19048075", "PMID:19174194", "PMID:19211673", "PMID:20215344", "PMID:21566185", "PMID:22411224", "PMID:22439894", "PMID:22479207", "PMID:22549959", "PMID:23297191", "PMID:23903188", "PMID:23954785", "PMID:24040508", "PMID:24131630", "PMID:24173799", "PMID:24737865", "PMID:24922054", "PMID:24950970", "PMID:25254346", "PMID:25356635", "PMID:25558068", "PMID:26457503", "PMID:26525673", "PMID:27013241", "PMID:27063937", "PMID:27150006", "PMID:27163480", "PMID:27542689", "PMID:27612382", "PMID:27612384", "PMID:27864883", "PMID:28072387", "PMID:28126842", "PMID:28137894", "PMID:28245923", "PMID:28292427", "PMID:28461239", "PMID:28807897", "PMID:29100657", "PMID:29184198", "PMID:29291974", "PMID:29291981", "PMID:29357350", "PMID:29674432", "PMID:30143032", "PMID:30399335", "WBbt:0003679"; "differentiated neuron", "nerve cell", "neural cell", "neuronal cell"; "Planarian_Anatomy"; rdfs:label "neuron" . _:6890aa a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "The basic cellular unit of nervous tissue. Each neuron consists of a body, an axon, and dendrites. Their purpose is to receive, conduct, and transmit impulses in the nervous system."; "CL:0000540" . a owl:Class; rdfs:subClassOf ; "A cell that is usually found in a two-dimensional sheet with a free surface. The cell has a cytoskeleton that allows for tight cell to cell contact and for cell polarity where the apical part is directed towards the lumen and the basal part to the basal lamina."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "CL:0000066", "PMID:18202849", "PMID:19048075", "PMID:20865784", "PMID:22479207", "PMID:24737865", "PMID:26114597", "PMID:28072387", "PMID:28461239"; "epidermis cell"; "Planarian_Anatomy"; rdfs:label "epithelial cell" . _:6890ba a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "A cell that is usually found in a two-dimensional sheet with a free surface. The cell has a cytoskeleton that allows for tight cell to cell contact and for cell polarity where the apical part is directed towards the lumen and the basal part to the basal lamina."; "CL:0000066" . a owl:Class; rdfs:subClassOf ; "A mature contractile cell, commonly known as a myocyte. This cell has as part of its cytoplasm myofibrils organized in various patterns."; ; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "CL:0000187", "PMID:15972844", "PMID:18202849", "PMID:19174194", "PMID:20422023", "PMID:20511647", "PMID:21458439", "PMID:21828097", "PMID:22252539", "PMID:22479207", "PMID:23318641", "PMID:23405188", "PMID:23954785", "PMID:24415944", "PMID:24737865", "PMID:25254346", "PMID:25558068", "PMID:26062938", "PMID:27063937", "PMID:27523733", "PMID:28216315", "PMID:28287248", "PMID:28292427", "PMID:28461239", "PMID:28686611", "PMID:28807897", "PMID:28893948", "PMID:30471994", "PMID:30962434"; "muscle fiber", "myocyte"; "Planarian_Anatomy"; rdfs:label "muscle cell" . _:6890ca a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "A mature contractile cell, commonly known as a myocyte. This cell has as part of its cytoplasm myofibrils organized in various patterns."; "CL:0000187" . _:6890da a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget ; rdfs:comment "Image is an electron micrograph depicting a muscle cell (arrowheads) cut in a transverse orientation with respect to the fiber length. Note the texture of the cytoplasm that comes from the organization of myofibrils. Scale bar is 1um." . a owl:Class; rdfs:subClassOf ; "A subdivision of an anatomical compartment."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "BSPO:0000070", "PMID:28292427", "PMID:29547123"; "body region"; "Planarian_Anatomy"; rdfs:label "anatomical region" . a owl:Class; rdfs:subClassOf , _:6890ea; "The central nervous system is the core nervous system that serves an integrating and coordinating function. In vertebrates it consists of the neural tube derivatives: the brain and spinal cord. In invertebrates it includes central ganglia plus nerve cord."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "PMID:16033796", "PMID:16344473", "PMID:16890156", "PMID:17251262", "PMID:17553481", "PMID:17670787", "PMID:17905225", "PMID:17942485", "PMID:18063757", "PMID:18202849", "PMID:18287199", "PMID:19174194", "PMID:19247960", "PMID:19933103", "PMID:20865784", "PMID:20967238", "PMID:21282632", "PMID:21295481", "PMID:21458439", "PMID:21664348", "PMID:21806978", "PMID:21828097", "PMID:22125640", "PMID:22252539", "PMID:22339734", "PMID:22385657", "PMID:22411224", "PMID:22427692", "PMID:22439894", "PMID:22445864", "PMID:23297191", "PMID:23318635", "PMID:23318641", "PMID:23903188", "PMID:24063805", "PMID:24173799", "PMID:24367277", "PMID:24704339", "PMID:24737865", "PMID:24922054", "PMID:24950970", "PMID:25356635", "PMID:25493551", "PMID:25772472", "PMID:25956527", "PMID:26017970", "PMID:26459857", "PMID:26711341", "PMID:26884331", "PMID:27013241", "PMID:27063937", "PMID:27068018", "PMID:27074666", "PMID:27150006", "PMID:27163480", "PMID:27240733", "PMID:27523733", "PMID:27542689", "PMID:27612382", "PMID:27612384", "PMID:27800171", "PMID:27864883", "PMID:28126842", "PMID:28434803", "PMID:28461239", "PMID:28807897", "PMID:28976975", "PMID:29273738", "PMID:29291981", "PMID:30399335", "PMID:30471994", "PMID:30729158", "PMID:30962434", "UBERON:0001017", "https://doi.org/10.1101/279364"; "CNS", "head-restricted nervous system"; "Planarian_Anatomy"; rdfs:label "central nervous system" . _:6890ea a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6890fa a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "The central nervous system is the core nervous system that serves an integrating and coordinating function. In vertebrates it consists of the neural tube derivatives: the brain and spinal cord. In invertebrates it includes central ganglia plus nerve cord."; "UBERON:0001017" . a owl:Class; rdfs:subClassOf ; "Straight or curved rod-like structures within the epidermal cells, oriented with long axis at right angles to the epidermal surface, that are discharged into mucous secretions."; ; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "OCLC:16809160"; "Planarian_Anatomy"; rdfs:label "rhabdite" . _:68910a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Straight or curved rod-like structures within the epidermal cells, oriented with long axis at right angles to the epidermal surface, that are discharged into mucous secretions."; "OCLC:16809160" . _:68911a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget ; rdfs:comment "Image is an electron micrograph depicting the epidermis. Inside of the epidermal cells, rhabdites (arrowheads) can be seen in various stages of expansion. Scale bar is 5 um." . a owl:Class; rdfs:subClassOf ; "A cell that specializes in controlled release of one or more substances."; ; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "CL:0000151", "NCIT:C13055"; "Planarian_Anatomy"; rdfs:label "secretory cell" . _:68912a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "A cell that specializes in controlled release of one or more substances."; "CL:0000151" . _:68913a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget ; rdfs:comment "Image is an electron micrograph of a viscid gland cell (arrowheads) passing across the basal lamina (BL). This cell secretes a specialized type of mucus. The secretory duct transports mucus to the outside of the animal, through the secretory pore. Ventral is down and scale bar is 5um." . a owl:Class; rdfs:subClassOf ; "An epithelial cell that has cilia."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "CL:0000067", "PMID:24737865", "PMID:28461239", "PMID:28807897"; "ciliated epidermal cell"; "Planarian_Anatomy"; rdfs:label "ciliated epithelial cell" . _:68914a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "An epithelial cell that has cilia."; "CL:0000067" . a owl:Class; rdfs:subClassOf , , _:68915a, _:68916a, _:68917a, _:68918a, _:68919a, _:6891aa, _:6891ba, _:6891ca, _:6891da, _:6891ea, _:6891fa, _:68920a, _:68921a; "An extraembryonic cell, produced by somatic vitellogenic glands in adult hermaphrodites, that provides nutrition to the developing embryo."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "CL:0000428", "ISBN:9780070316607", "PMID:22074376", "PMID:27149082", "PMID:28072387", "PMID:28434803", "PMID:29674431"; "vitellocyte"; "Planarian_Anatomy"; rdfs:label "yolk cell" . _:68915a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68916a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68917a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68918a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68919a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6891aa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6891ba a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6891ca a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6891da a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6891ea a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6891fa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68920a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68921a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68922a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "An extraembryonic cell, produced by somatic vitellogenic glands in adult hermaphrodites, that provides nutrition to the developing embryo."; "PMID:27149082" . a owl:Class; rdfs:comment "extra layer of complexity not needed upon further examination"; rdfs:label "obsolete anatomical compartment subdivision feature"; owl:deprecated true . a owl:Class; owl:equivalentClass _:68923a; rdfs:subClassOf , , _:68927a; "foxA1+ neoblasts and their post-mitotic, differentiating daughters required for maintenance and regeneration of the pharynx."; "Planarian_Anatomy"; "PLANA:0000110"; rdfs:label "pharynx progenitor cell" . _:68923a a owl:Class; owl:intersectionOf _:68924a . _:68924a rdf:first ; rdf:rest _:68926a . _:68926a rdf:first _:68925a; rdf:rest rdf:nil . _:68925a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68927a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68928a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "foxA1+ neoblasts and their post-mitotic, differentiating daughters required for maintenance and regeneration of the pharynx."; "PMID:24737865", "PMID:25254346" . a owl:Class; rdfs:subClassOf , , _:68929a, _:6892aa, _:6892ba, _:6892ca, _:6892da, _:6892ea, _:6892fa, _:68930a, _:68931a, _:68932a, _:68933a, _:68934a; "Ciliated epithelial cells that assemble into proximal tubules."; ; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "BTO:0006154", "PMID:21828097", "PMID:29674431"; "proximal tubule cell"; "Planarian_Anatomy"; rdfs:label "proximal tubule epithelial cell" . _:68929a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6892aa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6892ba a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6892ca a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6892da a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6892ea a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6892fa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68930a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68931a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68932a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68933a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68934a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68935a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Ciliated epithelial cells that assemble into proximal tubules."; "PMID:21828097" . _:68936a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget ; rdfs:comment "Image is an electron micrograph of a proximal tubule epithelial cell (arrowheads). N = nucleus. Note the way the cell is wrapped around the cilia, creating the lumen in the middle. Scale bar is 2um." . a owl:Class; rdfs:comment "removing all processes. may bring back if PLANA expanded to cover processes."; rdfs:label "obsolete Schmidtea mediterranea developmental term"; owl:deprecated true . a owl:Class; rdfs:subClassOf ; "Multicellular anatomical structure that consists of many cells of one or a few types, arranged in an extracellular matrix such that their long-range organisation is at least partly a repetition of their short-range organisation."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "UBERON:0000479", "https://github.com/obophenotype/planaria-ontology/blob/master/metadata/planarefs/planaref-0000000.md"; "Planarian_Anatomy"; rdfs:label "tissue" . _:68937a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Multicellular anatomical structure that consists of many cells of one or a few types, arranged in an extracellular matrix such that their long-range organisation is at least partly a repetition of their short-range organisation."; "UBERON:0000479" . a owl:Class; rdfs:subClassOf ; "Multicellular, connected anatomical structure that has multiple organs as parts and whose parts work together to achieve some shared function."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "UBERON:0000467"; "Planarian_Anatomy"; rdfs:label "anatomical system" . _:68938a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Multicellular, connected anatomical structure that has multiple organs as parts and whose parts work together to achieve some shared function."; "UBERON:0000467" . a owl:Class; rdfs:subClassOf , , _:68939a, _:6893aa, _:6893ba, _:6893ca, _:6893da, _:6893ea, _:6893fa, _:68940a, _:68941a, _:68942a, _:68943a, _:68944a; "Nonciliated epithelial cells that assemble into protonephridial distal tubules."; ; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "PMID:21828097", "PMID:29674431"; "distal tubule cell"; "Planarian_Anatomy"; rdfs:label "distal tubule epithelial cell" . _:68939a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6893aa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6893ba a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6893ca a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6893da a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6893ea a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6893fa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68940a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68941a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68942a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68943a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68944a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68945a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Nonciliated epithelial cells that assemble into protonephridial distal tubules."; "PMID:21828097" . _:68946a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget ; rdfs:comment "Image is an electron micrograph showing a cell (outlined) that is part of the collecting duct. Note how much more stained this cell is, compared to the surrounding ones. Also note the visible lumen of the collecting duct inside the cell where it is white and wrinkled. Scale bar is 1um." . a owl:Class; rdfs:subClassOf , ; "Anatomical entity that comprises the organism in the early stages of growth and differentiation that are characterized by cleavage, the laying down of fundamental tissues, and the formation of primitive organs and organ systems. For example, for mammals, the process would begin with zygote formation and end with birth. For insects, the process would begin at zygote formation and end with larval hatching. For plant zygotic embryos, this would be from zygote formation to the end of seed dormancy. For plant vegetative embryos, this would be from the initial determination of the cell or group of cells to form an embryo until the point when the embryo becomes independent of the parent plant."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "UBERON:0000922"; "Planarian_Anatomy"; rdfs:label "embryo" . _:68947a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Anatomical entity that comprises the organism in the early stages of growth and differentiation that are characterized by cleavage, the laying down of fundamental tissues, and the formation of primitive organs and organ systems. For example, for mammals, the process would begin with zygote formation and end with birth. For insects, the process would begin at zygote formation and end with larval hatching. For plant zygotic embryos, this would be from zygote formation to the end of seed dormancy. For plant vegetative embryos, this would be from the initial determination of the cell or group of cells to form an embryo until the point when the embryo becomes independent of the parent plant."; "UBERON:0000922" . a owl:Class; rdfs:subClassOf ; "Anatomical structure that is part of an embryo."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "BTO:0000174", "UBERON:0002050"; "Planarian_Anatomy"; rdfs:label "embryonic structure" . _:68948a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Anatomical structure that is part of an embryo."; "UBERON:0002050" . a owl:Class; rdfs:subClassOf , , _:68949a, _:6894aa, _:6894ba, _:6894ca, _:6894da, _:6894ea, _:6894fa, _:68950a, _:68951a, _:68952a, _:68953a, _:68954a; "Nonciliated epithelial cells that assemble into collecting ducts."; ; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "PMID:26057828"; "Planarian_Anatomy"; rdfs:label "collecting duct epithelial cell" . _:68949a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6894aa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6894ba a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6894ca a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6894da a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6894ea a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6894fa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68950a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68951a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68952a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68953a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68954a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68955a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Nonciliated epithelial cells that assemble into collecting ducts."; "PMID:26057828" . _:68956a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget ; rdfs:comment "Image is an electron micrograph showing a cell (outlined) that is part of the collecting duct. Note how much more stained this cell is, compared to the surrounding ones. Also note the visible lumen of the collecting duct inside the cell where it is white and wrinkled. Scale bar is 1um." . a owl:Class; rdfs:subClassOf ; "A post-mitotic, terminally differentiated cell type found in planarian embryos, juveniles and/or adult animals."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "PMID:29674432"; "Planarian_Anatomy"; rdfs:label "terminally differentiated cell" . a owl:Class; rdfs:subClassOf , , _:68957a; "A cycling neoblast and/or post-mitotic cell that is primed or irreversibly committed to a tissue-specific differentation program"; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "PMID:21852957", "PMID:29674432", "https://doi.org/10.1101/279364"; "precursor cell"; "Planarian_Anatomy"; rdfs:label "progenitor cell" . _:68957a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf ; "A relatively undifferentiated cell that retains the ability to divide and proliferate throughout life to provide progenitor cells that can differentiate into specialized cells."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "CL:0000034", "PMID:17376870", "PMID:19805089", "PMID:20422023", "PMID:20707997", "PMID:21937596", "PMID:22385657", "PMID:23123964", "PMID:23318635", "PMID:24063805", "PMID:24173799", "PMID:26062938", "PMID:26651295", "PMID:26711341", "PMID:27013241", "PMID:27034770", "PMID:27501047", "PMID:29124009", "https://doi.org/10.1101/279364"; "Planarian_Anatomy"; rdfs:label "stem cell" . _:68958a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "A relatively undifferentiated cell that retains the ability to divide and proliferate throughout life to provide progenitor cells that can differentiate into specialized cells."; "CL:0000034" . a owl:Class; rdfs:subClassOf , , _:68959a, _:6895aa, _:6895ba, _:6895ca; "A mature sexual reproductive cell having a single set of unpaired chromosomes."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "CL:0000300", "PMID:20844018", "PMID:23652002", "PMID:27149082", "PMID:27163480", "PMID:27304889", "PMID:28434803"; "Planarian_Anatomy"; rdfs:label "gamete" . _:68959a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6895aa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6895ba a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6895ca a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6895da a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "A mature sexual reproductive cell having a single set of unpaired chromosomes."; "CL:0000300" . a owl:Class; rdfs:subClassOf ; "A cell of the embryo."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "CL:0002321"; "Planarian_Anatomy"; rdfs:label "embryonic cell" . _:6895ea a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "A cell of the embryo."; "CL:0002321" . a owl:Class; rdfs:subClassOf , _:6895fa, _:68960a; "The sensory system subserving the sense of vision."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "UBERON:0002104"; "Planarian_Anatomy"; rdfs:label "visual system" . _:6895fa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68960a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68961a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "The sensory system subserving the sense of vision."; "UBERON:0002104" . a owl:Class; rdfs:subClassOf , _:68962a, _:68963a; "Anatomical system that overlaps the nervous system and is responsible for receiving and processing sensory information."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "UBERON:0001032"; "Planarian_Anatomy"; rdfs:label "sensory system" . _:68962a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68963a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68964a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Anatomical system that overlaps the nervous system and is responsible for receiving and processing sensory information."; "UBERON:0001032" . a owl:Class; rdfs:subClassOf , _:68965a; "Anatomical system that has as its parts the organs concerned with reproduction."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "UBERON:0000990"; "Planarian_Anatomy"; rdfs:label "reproductive system" . _:68965a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68966a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Anatomical system that has as its parts the organs concerned with reproduction."; "UBERON:0000990" . a owl:Class; rdfs:subClassOf , , _:68967a, _:68968a, _:68969a, _:6896aa, _:6896ba, _:6896ca, _:6896da, _:6896ea, _:6896fa, _:68970a; "Ciliated epithelial cells that assemble into the oviduct."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "PMID:22074376"; "Planarian_Anatomy"; rdfs:label "oviduct epithelial cell" . _:68967a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68968a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68969a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6896aa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6896ba a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6896ca a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6896da a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6896ea a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6896fa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68970a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68971a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Ciliated epithelial cells that assemble into the oviduct."; "PMID:22074376" . a owl:Class; rdfs:subClassOf , , _:68972a, _:68973a, _:68974a, _:68975a, _:68976a, _:68977a, _:68978a, _:68979a, _:6897aa, _:6897ba, _:6897ca; "Ciliated epithelial cells comprising the sperm ducts."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "PMID:19022767", "PMID:22074376"; "Planarian_Anatomy"; rdfs:label "sperm duct epithelial cell" . _:68972a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68973a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68974a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68975a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68976a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68977a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68978a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68979a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6897aa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6897ba a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6897ca a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6897da a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Ciliated epithelial cells comprising the sperm ducts."; "PMID:19022767", "PMID:22074376" . a owl:Class; ; rdfs:comment "replacing with UBERON term"; rdfs:label "obsolete anatomical structure"; owl:deprecated true . a owl:Class; rdfs:subClassOf , , ; "piwi-1+, nkx1-1+ progenitor neoblasts required for specification of circular muscle fibers."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "PMID:29168507"; "Planarian_Anatomy"; rdfs:label "circular muscle progenitor cell" . _:6897ea a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "piwi-1+, nkx1-1+ progenitor neoblasts required for specification of circular muscle fibers."; "PMID:29168507" . a owl:Class; rdfs:subClassOf ; "Primordia are populations of contiguous cells that are morphologically distinct and already correspond in extent to a later organ/tissue."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "UBERON:0001048"; "Planarian_Anatomy"; rdfs:label "primordium" . _:6897fa a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Primordia are populations of contiguous cells that are morphologically distinct and already correspond in extent to a later organ/tissue."; "UBERON:0001048" . a owl:Class; rdfs:comment "removing all processes. may bring back if PLANA expanded to cover processes."; rdfs:label "obsolete gametogenesis"; owl:deprecated true . a owl:Class; rdfs:subClassOf ; "A cell specialized to transduce mechanical stimuli and relay that information centrally in the nervous system."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "PMID:18202849", "PMID:7466176"; "mechanoreceptor"; "Planarian_Anatomy"; rdfs:label "mechanoreceptor cell" . _:68980a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "A cell specialized to transduce mechanical stimuli and relay that information centrally in the nervous system."; "PMID:18202849", "PMID:7466176" . a owl:Class; rdfs:subClassOf , ; "piwi-1+, myoD+, snail-1+ progenitor neoblasts required for specification and creation of longitudinal muscle fibers."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "PMID:29168507"; "Planarian_Anatomy"; rdfs:label "longitudinal muscle progenitor cell" . _:68981a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "piwi-1+, myoD+, snail-1+ progenitor neoblasts required for specification and creation of longitudinal muscle fibers."; "PMID:29168507" . a owl:Class; rdfs:subClassOf , , , _:68982a, _:68983a, _:68984a, _:68985a, _:68986a, _:68987a, _:68988a; "Cells expressing nanos that are located ventrally in the location that the ovaries form. Primordial germ cells are present in both asexual adults and sexual hermaphrodites. This term may be redundant with oogonial stem cell."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "PMID:17390146"; "Planarian_Anatomy"; rdfs:label "female primordial germ cell" . _:68982a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68983a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68984a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68985a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68986a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68987a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68988a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68989a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Cells expressing nanos that are located ventrally in the location that the ovaries form. Primordial germ cells are present in both asexual adults and sexual hermaphrodites. This term may be redundant with oogonial stem cell."; "PMID:17390146" . a owl:Class; rdfs:subClassOf ; "Anatomical structure that is an individual member of Schmidtea mediterranea or any other flatworm of the class Turbellaria."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "PMID:17251262", "PMID:26711341", "PMID:27502555", "PMID:28976975", "PMID:29906446", "UBERON:0000468"; "WW", "intact animal", "intact planarian", "whole animal", "whole body", "whole worm"; "Planarian_Anatomy"; rdfs:label "whole organism" . _:6898aa a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Anatomical structure that is an individual member of Schmidtea mediterranea or any other flatworm of the class Turbellaria."; "UBERON:0000468" . a owl:Class; rdfs:subClassOf ; "The regrowth of a lost or destroyed body part, such as an organ or tissue. This process may occur via renewal, repair, and/or growth alone (i.e. increase in size or mass)."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "GO:0031099", "GOC:mah", "GOC:pr", "Wikipedia:Regeneration:(biology)"; "regernative development"; "Planarian_Anatomy"; rdfs:label "regeneration" . _:6898ba a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "The regrowth of a lost or destroyed body part, such as an organ or tissue. This process may occur via renewal, repair, and/or growth alone (i.e. increase in size or mass)."; "GO:0031099" . a owl:Class; rdfs:subClassOf , , _:6898ca; "PROG-2-5 positive granules that range in size from 0.5um to 1um present in epithelia and epithelia progenitor cells. These are distinct from rhabdites."; ; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "PMID:29100657"; "Planarian_Anatomy"; rdfs:label "Hyman vesicle" . _:6898ca a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6898da a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "PROG-2-5 positive granules that range in size from 0.5um to 1um present in epithelia and epithelia progenitor cells. These are distinct from rhabdites."; "PMID:29100657" . _:6898ea a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget ; rdfs:comment "Image is an immunoelectron micrograph depicting hyman vesicles in the apical side of an epidermal cell. Scale bar is 1um." . a owl:Class; owl:equivalentClass _:6898fa; rdfs:subClassOf , _:68994a, _:68995a; "Compartment along the anteroposterior axis closer to the head rather than the tail, from the head margin to the esophagus."; ; "anterior region of whole organism"; "Planarian_Anatomy"; "PLANA:0000140"; rdfs:label "anterior region of the whole animal" . _:6898fa a owl:Class; owl:intersectionOf _:68991a . _:68991a rdf:first _:68990a; rdf:rest _:68993a . _:68990a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68993a rdf:first _:68992a; rdf:rest rdf:nil . _:68992a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68994a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68995a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68996a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Compartment along the anteroposterior axis closer to the head rather than the tail, from the head margin to the esophagus."; "ISBN:9780070316607", "OCLC:16809160", "PMID:16033796", "PMID:16311336", "PMID:17251262", "PMID:17376870", "PMID:17390146", "PMID:18063757", "PMID:18456843", "PMID:18786419", "PMID:19048075", "PMID:19174194", "PMID:19211673", "PMID:19247960", "PMID:19766622", "PMID:19805089", "PMID:19852954", "PMID:19933103", "PMID:20215344", "PMID:20422023", "PMID:21282632", "PMID:21295481", "PMID:21356107", "PMID:21566185", "PMID:21806978", "PMID:21828097", "PMID:21852957", "PMID:21894189", "PMID:21937596", "PMID:22339734", "PMID:22385657", "PMID:22439894", "PMID:22479207", "PMID:22696458", "PMID:22899852", "PMID:23250205", "PMID:23297191", "PMID:23318635", "PMID:23405188", "PMID:23629965", "PMID:23903188", "PMID:24040508", "PMID:24063805", "PMID:24367277", "PMID:24415944", "PMID:24523458", "PMID:24950970", "PMID:25017721", "PMID:25278423", "PMID:25356635", "PMID:25493551", "PMID:25558068", "PMID:26062938", "PMID:26114597", "PMID:26556349", "PMID:26651295", "PMID:26884331", "PMID:27013241", "PMID:27034770", "PMID:27063937", "PMID:27074666", "PMID:27150006", "PMID:27240733", "PMID:27612382", "PMID:27612384", "PMID:27800171", "PMID:28072387", "PMID:28287248", "PMID:28893948", "PMID:29273738", "PMID:29547123", "PMID:29557542", "PMID:29906446", "PMID:30143032", "PMID:30471994", "PMID:30485821", "PMID:30962434" . _:68997a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget ; rdfs:comment "Illustration of the anterior region of the whole animal (in green)." . a owl:Class; owl:equivalentClass _:68998a; rdfs:subClassOf , _:6899da, _:6899ea; "Three dimensional compartment along the dorsoventral axis that is above the anteroposterior axis, containing the eyes."; ; "dorsal region of whole organism"; "Planarian_Anatomy"; "PLANA:0000141"; rdfs:label "dorsal region of the whole animal" . _:68998a a owl:Class; owl:intersectionOf _:6899aa . _:6899aa rdf:first _:68999a; rdf:rest _:6899ca . _:68999a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6899ca rdf:first _:6899ba; rdf:rest rdf:nil . _:6899ba a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6899da a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6899ea a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6899fa a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget ; rdfs:comment "Illustration of the dorsal region of the whole animal (in green)." . a owl:Class; owl:equivalentClass _:689a0a; rdfs:subClassOf , _:689a5a, _:689a6a; "Three dimensional compartment along the anteroposterior axis that is closer to the tail rather than the head, from the anterior boundary of the pharyngeal pouch to the tip of the tail."; ; "posterior compartment of the whole animal", "posterior region of whole organism"; "Planarian_Anatomy"; "PLANA:0000142"; rdfs:label "posterior region of the whole animal" . _:689a0a a owl:Class; owl:intersectionOf _:689a2a . _:689a2a rdf:first _:689a1a; rdf:rest _:689a4a . _:689a1a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:689a4a rdf:first _:689a3a; rdf:rest rdf:nil . _:689a3a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:689a5a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:689a6a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:689a7a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget ; rdfs:comment "Illustration of the posterior compartement of the whole animal (in green)." . a owl:Class; owl:equivalentClass _:689a8a; rdfs:subClassOf , _:689ada, _:689aea; "Compartment along the dorsoventral axis that is below the anteroposterior axis."; ; "ventral region of whole organism"; "Planarian_Anatomy"; "PLANA:0000143"; rdfs:label "ventral region of the whole animal" . _:689a8a a owl:Class; owl:intersectionOf _:689aaa . _:689aaa rdf:first _:689a9a; rdf:rest _:689aca . _:689a9a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:689aca rdf:first _:689aba; rdf:rest rdf:nil . _:689aba a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:689ada a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:689aea a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:689afa a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget ; rdfs:comment "Illustration of the ventral region of the whole animal (in green)." . a owl:Class; rdfs:subClassOf , , _:689b0a, _:689b1a, _:689b2a, _:689b3a, _:689b4a, _:689b5a, _:689b6a; "The passageway connecting the genital atrium to the copulatory bursa. Part of the copulatory apparatus. During mating, sperm from a partner is deposited into the bursal canal, where it collects in the copulatory bursa before travelling up the oviducts to the tuba."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "ISBN:9780070316607", "PMID:20967238", "PMID:22074376", "PMID:25278423", "PMID:27149082"; "Planarian_Anatomy"; rdfs:label "bursal canal" . _:689b0a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:689b1a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:689b2a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:689b3a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:689b4a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:689b5a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:689b6a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:689b7a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "The passageway connecting the genital atrium to the copulatory bursa. Part of the copulatory apparatus. During mating, sperm from a partner is deposited into the bursal canal, where it collects in the copulatory bursa before travelling up the oviducts to the tuba."; "PMID:22074376" . a owl:Class; rdfs:subClassOf , , _:689b8a, _:689b9a, _:689baa, _:689bba; "The gonopore, a component of the copulatory apparatus, is an opening located on the ventral side of the animal posterior to the pharynx. The gonopore is the sole point of exit and entry for the reproductive system, allowing from reciprocal exchange of sperm during copulation and egg capsule laying."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "ISBN:9780070316607", "PMID:16344473", "PMID:19247960", "PMID:20967238", "PMID:21566185", "PMID:22074376", "PMID:22899852", "PMID:25278423", "PMID:27149082", "PMID:28072387", "PMID:28434803", "https://doi.org/10.1101/279364"; "common gonopore", "genital pore"; "Planarian_Anatomy"; rdfs:label "gonopore" . _:689b8a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:689b9a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:689baa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:689bba a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:689bca a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "The gonopore, a component of the copulatory apparatus, is an opening located on the ventral side of the animal posterior to the pharynx. The gonopore is the sole point of exit and entry for the reproductive system, allowing from reciprocal exchange of sperm during copulation and egg capsule laying."; "PMID:22074376" . a owl:Class; rdfs:subClassOf , , _:689bda, _:689bea, _:689bfa; "A gonad containing female germline stem cells which fuel oocyte production. Two ovaries are located ventally, underneath the body wall musculature, immediately posterior to the cephalic ganglia (brain) and adjacent to the ventral nerve cords. The neoblast compartment, including piwi-1+, nanos+ primordial germ cells, fuel formation of the ovaries during juvenile development."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "ISBN:9780070316607", "NCIT:C12404", "PMID:16344473", "PMID:17376870", "PMID:17390146", "PMID:18456843", "PMID:19247960", "PMID:20844018", "PMID:20967238", "PMID:22074376", "PMID:22318224", "PMID:22371573", "PMID:23652002", "PMID:25278423", "PMID:25404302", "PMID:27149082", "PMID:27163480", "PMID:27330085", "PMID:28072387", "PMID:28434803", "PMID:28812561", "https://doi.org/10.1101/279364"; "female gonad"; "Planarian_Anatomy"; rdfs:label "ovary" . _:689bda a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:689bea a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:689bfa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:689c0a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "A gonad containing female germline stem cells which fuel oocyte production. Two ovaries are located ventally, underneath the body wall musculature, immediately posterior to the cephalic ganglia (brain) and adjacent to the ventral nerve cords. The neoblast compartment, including piwi-1+, nanos+ primordial germ cells, fuel formation of the ovaries during juvenile development."; "PMID:17376870" . a owl:Class; rdfs:subClassOf , , _:689c1a, _:689c2a, _:689c3a, _:689c4a, _:689c5a, _:689c6a; "Ciliated tubes adjacent to the ventral nerve cords, adjoining the tuba and the bursal canal, that transport fertilized oocytes to the genital atrium."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "ISBN:9780070316607", "PMID:16344473", "PMID:17376870", "PMID:19247960", "PMID:20844018", "PMID:20967238", "PMID:22074376", "PMID:23652002", "PMID:25278423", "PMID:27149082", "PMID:27163480", "PMID:28072387", "https://doi.org/10.1101/279364"; "ovovitilline duct"; "Planarian_Anatomy"; rdfs:label "oviduct" . _:689c1a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:689c2a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:689c3a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:689c4a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:689c5a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:689c6a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:689c7a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Ciliated tubes adjacent to the ventral nerve cords, adjoining the tuba and the bursal canal, that transport fertilized oocytes to the genital atrium."; "PMID:22074376" . a owl:Class; rdfs:subClassOf , , _:689c8a, _:689c9a, _:689caa, _:689cba; "A rounded protuberance, connected to the seminal vesicles, responsible for transferring semen into a mating partner's bursal canal."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "ISBN:9780070316607", "PMID:20967238", "PMID:22074376", "PMID:23652002", "PMID:25278423", "PMID:27074666", "PMID:28072387", "PMID:28434803", "https://doi.org/10.1101/279364"; "penis", "penis bulb"; "Planarian_Anatomy"; rdfs:label "penis papilla" . _:689c8a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:689c9a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:689caa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:689cba a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:689cca a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "A rounded protuberance, connected to the seminal vesicles, responsible for transferring semen into a mating partner's bursal canal."; "PMID:22074376" . a owl:Class; rdfs:subClassOf , , _:689cda, _:689cea, _:689cfa, _:689d0a; "A network of tubes that transport sperm from the testes to the seminal vesicles. Tubes connect each testis to ducts that run along the ventral nerve cords. The ducts bifurcate immediately posterior to the pharynx, where they connect to the seminal vesicles."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "ISBN:9780070316607", "PMID:17390146", "PMID:19022767", "PMID:19247960", "PMID:20844018", "PMID:20967238", "PMID:22074376", "PMID:23652002", "PMID:25278423", "PMID:27149082", "PMID:27304889", "PMID:28072387", "PMID:28434803", "ZFA:0001268", "https://doi.org/10.1101/279364"; "seminal duct", "sperm ductule"; "Planarian_Anatomy"; rdfs:label "sperm duct" . _:689cda a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:689cea a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:689cfa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:689d0a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:689d1a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "A network of tubes that transport sperm from the testes to the seminal vesicles. Tubes connect each testis to ducts that run along the ventral nerve cords. The ducts bifurcate immediately posterior to the pharynx, where they connect to the seminal vesicles."; "PMID:19022767", "PMID:22074376" . a owl:Class; rdfs:subClassOf , , _:689d2a, _:689d3a, _:689d4a, _:689d5a, _:689d6a, _:689d7a, _:689d8a; "A gonad containing male germline stem cells which fuel sperm production. Testes are located dorsolaterally, and are excluded from the head. The neoblast compartment, including piwi-1+, nanos+ primordial germ cells, fuels formation of testes during juvenile development and regeneration."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "ISBN:9780070316607", "PMID:16344473", "PMID:17376870", "PMID:18456843", "PMID:19022767", "PMID:19247960", "PMID:20844018", "PMID:20967238", "PMID:22074376", "PMID:22318224", "PMID:22371573", "PMID:23629965", "PMID:23652002", "PMID:25278423", "PMID:25404302", "PMID:27149082", "PMID:27163480", "PMID:27304889", "PMID:27330085", "PMID:28072387", "PMID:28434803", "PMID:28812561", "PMID:29095551", "UBERON:0000473", "https://doi.org/10.1101/279364"; "male gonad", "testis lobe", "testis lobule"; "Planarian_Anatomy"; rdfs:label "testis" . _:689d2a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:689d3a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:689d4a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:689d5a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:689d6a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:689d7a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:689d8a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:689d9a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "A gonad containing male germline stem cells which fuel sperm production. Testes are located dorsolaterally, and are excluded from the head. The neoblast compartment, including piwi-1+, nanos+ primordial germ cells, fuels formation of testes during juvenile development and regeneration."; "PMID:19022767" . a owl:Class; ; rdfs:comment "replacing with UBERON term"; rdfs:label "obsolete developing anatomical structure"; owl:deprecated true . a owl:Class; rdfs:subClassOf , , , _:689daa, _:689dba, _:689dca, _:689dda, _:689dea, _:689dfa, _:689e0a, _:689e1a, _:689e2a; "Primitive ectoderm cells differentiate from the blastomere population, exit the cell cycle and interact to boud the embryo during Stage 2."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "OCLC:20423827", "OCLC:464776945", "OCLC:82522822", "PMID:28072387", "https://github.com/obophenotype/planaria-ontology/blob/master/metadata/planarefs/planaref-0000001.md"; "Planarian_Anatomy"; rdfs:label "primitive ectoderm cell" . _:689daa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:689dba a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:689dca a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:689dda a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:689dea a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:689dfa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:689e0a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:689e1a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:689e2a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:689e3a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Primitive ectoderm cells differentiate from the blastomere population, exit the cell cycle and interact to boud the embryo during Stage 2."; "OCLC:20423827", "OCLC:464776945", "OCLC:82522822", "PMID:28072387", "https://github.com/obophenotype/planaria-ontology/blob/master/metadata/planarefs/planaref-0000001.md" . a owl:Class; ; rdfs:comment "replace with blastomere only"; rdfs:label "obsolete blastomere compartment"; owl:deprecated true . a owl:Class; rdfs:subClassOf ; "A postnatal stage of Smed development that initiates with hatching and proceeds until sexual maturity is reached. Reproductive structures develop during the juvenile stage."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "UBERON:0034919"; "Planarian_Anatomy"; rdfs:label "juvenile stage" . a owl:Class; rdfs:subClassOf , , _:689e4a; "Products of the reproductive system include gametes, zygotes, yolk cells and egg capsules."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "Planarian_Anatomy"; rdfs:label "reproductive system product" . _:689e4a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:689e5a; "A proteinaceous, semi-permeable shell housing yolk cells and one or more embryos.Egg capsules are anchored to a substrate via a stalk."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "ISBN:9780070316607", "PMID:16344473", "PMID:17376870", "PMID:18942102", "PMID:20967238", "PMID:22074376", "PMID:22371573", "PMID:25278423", "PMID:27149082", "PMID:28072387", "PMID:28434803", "PMID:28812561", "https://doi.org/10.1101/279364"; "capsule", "cocoon"; "Planarian_Anatomy"; rdfs:label "egg capsule" . _:689e5a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:689e6a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "A proteinaceous, semi-permeable shell housing yolk cells and one or more embryos.Egg capsules are anchored to a substrate via a stalk."; "PMID:18942102" . a owl:Class; rdfs:subClassOf ; "Reproductive organ that produces and releases eggs (ovary) or sperm (testis)."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "ISBN:9780070316607", "PMID:16344473", "PMID:17376870", "PMID:17390146", "PMID:20844018", "PMID:22074376", "PMID:22252538", "PMID:22371573", "PMID:23652002", "PMID:27149082", "PMID:27163480", "PMID:28434803", "PMID:28976975", "UBERON:0000991", "https://doi.org/10.1101/279364"; "Planarian_Anatomy"; rdfs:label "gonad" . _:689e7a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Reproductive organ that produces and releases eggs (ovary) or sperm (testis)."; "UBERON:0000991" . a owl:Class; rdfs:subClassOf , , , _:689e8a, _:689e9a, _:689eaa, _:689eba, _:689eca, _:689eda, _:689eea, _:689efa, _:689f0a, _:689f1a; "Cells coexpressing piwi-1 and nanos that are required for male gonad formation. Primordial germ cells are present in both asexual adults and sexual hermaphrodites. This term may be redundant with spermatogonial stem cell."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "PMID:17376870", "PMID:17390146"; "Planarian_Anatomy"; rdfs:label "male primordial germ cell" . _:689e8a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:689e9a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:689eaa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:689eba a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:689eca a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:689eda a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:689eea a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:689efa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:689f0a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:689f1a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:689f2a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Cells coexpressing piwi-1 and nanos that are required for male gonad formation. Primordial germ cells are present in both asexual adults and sexual hermaphrodites. This term may be redundant with spermatogonial stem cell."; "PMID:17376870", "PMID:17390146" . a owl:Class; rdfs:subClassOf , , , _:689f3a, _:689f4a, _:689f5a, _:689f6a, _:689f7a, _:689f8a, _:689f9a, _:689faa, _:689fba, _:689fca, _:689fda, _:689fea; "gh4+, nanos+ cells residing at the testis periphery that self-renew and give rise to differentiating daughters that will ultimately produce haploid sperm."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "PMID:19022767", "PMID:20844018", "PMID:27163480", "PMID:27330085"; "SSC", "male germline stem cell"; "Planarian_Anatomy"; rdfs:label "spermatogonial stem cell" . _:689f3a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:689f4a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:689f5a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:689f6a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:689f7a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:689f8a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:689f9a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:689faa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:689fba a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:689fca a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:689fda a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:689fea a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:689ffa a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "gh4+, nanos+ cells residing at the testis periphery that self-renew and give rise to differentiating daughters that will ultimately produce haploid sperm."; "PMID:19022767", "PMID:20844018", "PMID:27163480", "PMID:27330085" . a owl:Class; rdfs:subClassOf , , , _:68a00a, _:68a01a, _:68a02a, _:68a03a, _:68a04a, _:68a05a, _:68a06a, _:68a07a, _:68a08a, _:68a09a, _:68a0aa, _:68a0ba; "An euploid male germ cell of an early stage of spermatogenesis. In planaria, the gh4+ stem cell daughter exiting the niche undergoes three rounds of transit amplifying division with incomplete cytokinesis prior to transitioning to terminal differentiation."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "CL:0000020", "PMID:23629965", "PMID:27163480", "PMID:27330085", "https://doi.org/10.1101/279364"; "spermatogonial cell"; "Planarian_Anatomy"; rdfs:label "spermatogonium" . _:68a00a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68a01a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68a02a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68a03a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68a04a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68a05a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68a06a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68a07a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68a08a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68a09a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68a0aa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68a0ba a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68a0ca a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "An euploid male germ cell of an early stage of spermatogenesis. In planaria, the gh4+ stem cell daughter exiting the niche undergoes three rounds of transit amplifying division with incomplete cytokinesis prior to transitioning to terminal differentiation."; "PMID:27163480", "PMID:27330085" . a owl:Class; rdfs:subClassOf , , _:68a0da, _:68a0ea, _:68a0fa, _:68a10a, _:68a11a, _:68a12a, _:68a13a, _:68a14a, _:68a15a, _:68a16a; "A tektin-1+ male germ cell that develops from spermatogonia. The euploid primary spermatocytes undergo meiosis and give rise to the haploid secondary spermatocytes which in turn give rise to spermatids."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "CL:0000017", "PMID:17376870", "PMID:20844018", "PMID:22074376", "PMID:25278423", "PMID:25404302", "PMID:27163480", "PMID:27304889", "PMID:27330085", "PMID:29095551" . _:68a0da a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68a0ea a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68a0fa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68a10a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68a11a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68a12a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68a13a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68a14a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68a15a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68a16a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . "primary spermatocyte"; "Planarian_Anatomy"; rdfs:label "spermatocyte" . _:68a17a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "A tektin-1+ male germ cell that develops from spermatogonia. The euploid primary spermatocytes undergo meiosis and give rise to the haploid secondary spermatocytes which in turn give rise to spermatids."; "PMID:27330085" . a owl:Class; rdfs:subClassOf , , _:68a18a, _:68a19a, _:68a1aa, _:68a1ba, _:68a1ca, _:68a1da, _:68a1ea, _:68a1fa, _:68a20a; "A male germ cell that develops from the haploid secondary spermatocytes. Without further division, spermatids undergo structural changes and give rise to spermatozoa."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "CL:0000018", "PMID:17376870", "PMID:20844018", "PMID:22074376", "PMID:25278423", "PMID:25404302", "PMID:27163480", "PMID:27304889", "PMID:27330085"; "Planarian_Anatomy"; rdfs:label "spermatid" . _:68a18a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68a19a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68a1aa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68a1ba a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68a1ca a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68a1da a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68a1ea a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68a1fa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68a20a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68a21a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "A male germ cell that develops from the haploid secondary spermatocytes. Without further division, spermatids undergo structural changes and give rise to spermatozoa."; "CL:0000018" . a owl:Class; rdfs:subClassOf , , , _:68a22a, _:68a23a, _:68a24a, _:68a25a, _:68a26a, _:68a27a, _:68a28a, _:68a29a; "A piwi-1+, nanos+ cell residing in the ovary that self-renews and give rise to oogonial cells that differentiate into oocytes."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "PMID:23652002", "PMID:25278423", "PMID:27149082", "PMID:27163480", "PMID:27330085"; "female germ cell", "female germline cell", "female germline stem cell", "oogonial stem cell", "ovarian germline stem cell"; "Planarian_Anatomy"; rdfs:label "oogonial stem cell" . _:68a22a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68a23a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68a24a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68a25a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68a26a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68a27a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68a28a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68a29a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68a2aa a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "A piwi-1+, nanos+ cell residing in the ovary that self-renews and give rise to oogonial cells that differentiate into oocytes."; "PMID:19022767", "PMID:20844018" . a owl:Class; rdfs:subClassOf , , _:68a2ba, _:68a2ca, _:68a2da, _:68a2ea, _:68a2fa, _:68a30a, _:68a31a, _:68a32a; "Glands surrounding the genital atrium that are required for production of the proteinaceous egg capsule shell and stalk."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "ASIN:B000M4NK9M", "ISBN:9780070316607", "PMID:18942102", "PMID:20967238", "PMID:22074376", "PMID:23652002", "PMID:25278423", "PMID:27149082"; "shell gland"; "Planarian_Anatomy"; rdfs:label "cement gland" . _:68a2ba a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68a2ca a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68a2da a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68a2ea a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68a2fa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68a30a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68a31a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68a32a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68a33a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Glands surrounding the genital atrium that are required for production of the proteinaceous egg capsule shell and stalk."; "ASIN:B000M4NK9M", "PMID:18942102", "PMID:22074376", "PMID:27149082" . a owl:Class; rdfs:comment "removing all processes. may bring back if PLANA expanded to cover processes."; rdfs:label "obsolete oviparity"; owl:deprecated true . a owl:Class; rdfs:comment "removing all processes. may bring back if PLANA expanded to cover processes."; rdfs:label "obsolete cross-fertilization"; owl:deprecated true . a owl:Class; rdfs:subClassOf , _:68a34a; "1. A gamete (as an egg or sperm cell) or one of its antecedent cells. 2. A mature male or female germ cell usually possessing a haploid chromosome set and capable of initiating formation of a new diploid individual by fusion with a gamete of the opposite sex."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "BTO:0000535"; "Planarian_Anatomy"; rdfs:label "germ cell" . _:68a34a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68a35a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "1. A gamete (as an egg or sperm cell) or one of its antecedent cells. 2. A mature male or female germ cell usually possessing a haploid chromosome set and capable of initiating formation of a new diploid individual by fusion with a gamete of the opposite sex."; "BTO:0000535" . a owl:Class; rdfs:subClassOf ; "A male germ cell is a germ cell that supports male gamete production."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "CL:0000015", "PMID:23652002", "PMID:27304889", "PMID:27330085"; "Planarian_Anatomy"; rdfs:label "male germ cell" . _:68a36a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "A male germ cell is a germ cell that supports male gamete production."; "CL:0000015" . a owl:Class; rdfs:subClassOf ; "Female germ cell is a germ cell that supports female gamete production."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "CL:0000021"; "Planarian_Anatomy"; rdfs:label "female germ cell" . _:68a37a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Female germ cell is a germ cell that supports female gamete production."; "CL:0000021" . a owl:Class; rdfs:subClassOf , , _:68a38a, _:68a39a, _:68a3aa; "A sperm storage organ located immediately posterior to the ovary, at the anterior end of the oviduct. Oocytes exiting the ovary are fertilized in the tuba as they enter the oviduct."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "PMID:19022767", "PMID:20844018", "PMID:22074376", "PMID:25278423", "PMID:27149082", "PMID:27163480", "PMID:28434803"; "Planarian_Anatomy"; rdfs:label "tuba" . _:68a38a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68a39a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68a3aa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68a3ba a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "A sperm storage organ located immediately posterior to the ovary, at the anterior end of the oviduct. Oocytes exiting the ovary are fertilized in the tuba as they enter the oviduct."; "PMID:19022767", "PMID:20844018", "PMID:22074376", "PMID:27149082" . a owl:Class; rdfs:subClassOf , , _:68a3ca, _:68a3da, _:68a3ea, _:68a3fa, _:68a40a, _:68a41a, _:68a42a, _:68a43a; "Glands surrounding the oviducts which produce yolk cells. Yolk cells deposited into the oviducts travel to the genital atrium where they are packaged, along with one or more zygotes, into developing egg capsules."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "ISBN:9780070316607", "PMID:16344473", "PMID:16932928", "PMID:17390146", "PMID:18942102", "PMID:19247960", "PMID:22074376", "PMID:23652002", "PMID:27149082", "PMID:27163480", "PMID:27501047", "PMID:28072387", "PMID:28434803", "https://doi.org/10.1101/279364"; "vitellaria", "vitellarium", "yolk gland"; "Planarian_Anatomy"; rdfs:label "vitelline gland" . _:68a3ca a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68a3da a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68a3ea a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68a3fa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68a40a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68a41a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68a42a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68a43a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68a44a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Glands surrounding the oviducts which produce yolk cells. Yolk cells deposited into the oviducts travel to the genital atrium where they are packaged, along with one or more zygotes, into developing egg capsules."; "PMID:16932928", "PMID:18942102", "PMID:27149082" . a owl:Class; rdfs:subClassOf , , _:68a45a, _:68a46a, _:68a47a, _:68a48a, _:68a49a; "Accessory reproductive structures involved in copulation, egg capsule development and laying."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "ISBN:9780070316607", "PMID:16344473", "PMID:17376870", "PMID:17390146", "PMID:19247960", "PMID:20967238", "PMID:22074376", "PMID:23652002", "PMID:27149082", "PMID:27163480", "PMID:28434803"; "copulatory complex"; "Planarian_Anatomy"; rdfs:label "copulatory apparatus" . _:68a45a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68a46a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68a47a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68a48a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68a49a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68a4aa a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Accessory reproductive structures involved in copulation, egg capsule development and laying."; "PMID:22074376" . a owl:Class; rdfs:subClassOf , , _:68a4ba, _:68a4ca, _:68a4da; "An organ that receives and stores sperm from mating partners."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "ISBN:9780070316607", "PMID:20967238", "PMID:22074376", "PMID:25278423", "https://doi.org/10.1101/279364"; "bursa", "male antrum"; "Planarian_Anatomy"; rdfs:label "copulatory bursa" . _:68a4ba a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68a4ca a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68a4da a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68a4ea a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "An organ that receives and stores sperm from mating partners."; "PMID:22074376" . a owl:Class; rdfs:subClassOf , , _:68a4fa, _:68a50a, _:68a51a; "Glandular pouches adjoining the sperm ducts which produce seminal fluid."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "NCIT:C12787", "PMID:19022767", "PMID:22074376", "UBERON:0000998"; "Planarian_Anatomy"; rdfs:label "seminal vesicle" . _:68a4fa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68a50a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68a51a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68a52a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Glandular pouches adjoining the sperm ducts which produce seminal fluid."; "PMID:19022767", "PMID:22074376" . a owl:Class; rdfs:subClassOf , _:68a53a; "A cyst of 8 interconnected spermatocytes undergoes meiosis, producing 32 haploid round spermatids. Round spermatids express protein kinase A, andundergo morphogenesis to produce mature sperm."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "PMID:20844018", "PMID:27163480", "PMID:27304889", "PMID:27330085", "PMID:29095551", "https://doi.org/10.1101/279364"; "Planarian_Anatomy"; rdfs:label "round spermatid" . _:68a53a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68a54a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "A cyst of 8 interconnected spermatocytes undergoes meiosis, producing 32 haploid round spermatids. Round spermatids express protein kinase A, andundergo morphogenesis to produce mature sperm."; "PMID:27163480", "PMID:27330085" . a owl:Class; rdfs:subClassOf , _:68a55a; "Spermatids expressing protein kinase A undergoing morphogenic changes to make mature sperm."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "PMID:20844018", "PMID:27163480", "PMID:27304889", "PMID:27330085", "PMID:29095551"; "elongating spermatid"; "Planarian_Anatomy"; rdfs:label "elongate spermatid" . _:68a55a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68a56a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Spermatids expressing protein kinase A undergoing morphogenic changes to make mature sperm."; "PMID:27163480", "PMID:27330085" . a owl:Class; rdfs:subClassOf , , , _:68a57a, _:68a58a, _:68a59a, _:68a5aa, _:68a5ba, _:68a5ca, _:68a5da, _:68a5ea; "An undifferentiated germ cell that proliferates rapidly and gives rise to oocytes."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "FMA:83673"; "Planarian_Anatomy"; rdfs:label "oogonial cell" . _:68a57a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68a58a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68a59a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68a5aa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68a5ba a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68a5ca a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68a5da a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68a5ea a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68a5fa a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "An undifferentiated germ cell that proliferates rapidly and gives rise to oocytes."; "FMA:83673" . a owl:Class; rdfs:subClassOf , , _:68a60a, _:68a61a, _:68a62a, _:68a63a, _:68a64a, _:68a65a, _:68a66a, _:68a67a, _:68a68a, _:68a69a, _:68a6aa, _:68a6ba, _:68a6ca, _:68a6da, _:68a6ea, _:68a6fa; "Any collection of muscles that is part of a body wall [Automatically generated definition]."; ; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "BSA:0000058", "BTO:0001863", "FMA:86931", "PMID:19048075", "PMID:19174194", "PMID:21828097", "PMID:22385657", "PMID:24992682", "PMID:27063937", "PMID:27074666", "PMID:28171748", "PMID:29100657", "PMID:29547123", "PMID:29674431", "PMID:29674432", "PMID:30471994", "PMID:30962434", "UBERON:0004462", "WBbt:0005813"; "BWM", "body muscle", "body wall muscle", "body wall muscles", "body-wall muscle", "body-wall musculature", "muscle layer surrounding the body wall"; "Planarian_Anatomy"; rdfs:label "body wall musculature" . _:68a60a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68a61a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68a62a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68a63a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68a64a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68a65a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68a66a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68a67a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68a68a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68a69a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68a6aa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68a6ba a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68a6ca a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68a6da a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68a6ea a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68a6fa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68a70a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Any collection of muscles that is part of a body wall [Automatically generated definition]."; "UBERON:0004462" . _:68a71a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget ; rdfs:comment "http://purl.obolibrary.org/obo/Image is an electron micrograph of the dorsal epidermis, basal lamina (BL), and underlying body wall musculature. Three types of muscle cells have been color coded form superficial to deep_ Circular muscle = magenta; longitudinal muscle = green; diagonal muscle = red. Scale bar is 2um." . a owl:Class; rdfs:subClassOf , , _:68a72a, _:68a73a, _:68a74a, _:68a75a; "Pharynx muscle fibers running anteroposterior (proximal to distal)."; ; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "ASIN:B000M4NK9M"; "pharyngeal longitudinal muscle cell", "pharyngeal longitudinal muscle fiber", "pharynx longitudinal muscle fiber"; "Planarian_Anatomy"; rdfs:label "pharynx longitudinal muscle cell" . _:68a72a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68a73a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68a74a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68a75a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68a76a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Pharynx muscle fibers running anteroposterior (proximal to distal)."; "ASIN:B000M4NK9M" . _:68a77a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget ; rdfs:comment "Image is an electron micrograph of a transverse section through the pharynx. The inner longitudinal muscle (arrowheads) is immediately deep to the inner circular muscle of the pharynx. Magenta = circular; green = longitudinal; red = radial. Scale bar is 2 um." . a owl:Class; ; rdfs:comment "replacing with UBERON term"; rdfs:label "obsolete anatomical cavity"; owl:deprecated true . a owl:Class; ; rdfs:comment "replacing with UBERON term"; rdfs:label "obsolete anatomical entity"; owl:deprecated true . a owl:Class; ; rdfs:comment "replacing with UBERON term"; rdfs:label "obsolete immaterial anatomical entity"; owl:deprecated true . a owl:Class; ; rdfs:comment "replacing with UBERON term"; rdfs:label "obsolete anatomical point"; owl:deprecated true . a owl:Class; ; rdfs:comment "replacing with UBERON term"; rdfs:label "obsolete anatomical space"; owl:deprecated true . a owl:Class; rdfs:subClassOf , , _:68a78a, _:68a79a, _:68a7aa, _:68a7ba, _:68a7ca, _:68a7da; "Anatomical space enclosed by the pharynx inner epithelium."; ; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "PMID:17251262", "PMID:26711341", "PMID:27502555", "PMID:28976975", "PMID:29906446", "UBERON:0000468"; "cavity of pharynx", "pharyngeal lumen", "pharynx cavity"; "Planarian_Anatomy"; rdfs:label "pharynx lumen" . _:68a78a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68a79a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68a7aa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68a7ba a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68a7ca a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68a7da a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68a7ea a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Anatomical space enclosed by the pharynx inner epithelium."; "UBERON:0000468" . _:68a7fa a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget ; rdfs:comment "Depicted by field contains hematoxylin and eosin staining section of a asexual adult animal. Cavity of pharynx is indicated by arrows. Scale bar = 250um" . a owl:Class; rdfs:subClassOf , , _:68a80a, _:68a81a, _:68a82a, _:68a83a, _:68a84a, _:68a85a, _:68a86a, _:68a87a; "An anatomical space that is surrounded by a digestive tract."; ; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "PMID:17553481", "PMID:21664348", "PMID:21828097", "PMID:28072387", "UBERON:0006909"; "digestive system lumen", "gut cavity", "lumen of digestive tract"; "Planarian_Anatomy"; rdfs:label "digestive tract lumen" . _:68a80a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68a81a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68a82a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68a83a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68a84a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68a85a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68a86a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68a87a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68a88a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "An anatomical space that is surrounded by a digestive tract."; "PMID:21664348" . _:68a89a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget ; rdfs:comment "Depicted by field contains hematoxylin and eosin staining on a coronal section of a asexual adult animal. The lumen of the digestive tract is indicated by arrows. Scale bar = 250um" . a owl:Class; rdfs:subClassOf , , _:68a8aa, _:68a8ba, _:68a8ca, _:68a8da, _:68a8ea, _:68a8fa, _:68a90a, _:68a91a, _:68a92a, _:68a93a, _:68a94a, _:68a95a; "The orifice that connects the mouth to the exterior of the body."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "PMID:17670787", "PMID:29674431", "PMID:30399335", "UBERON:0000166"; "pharyngeal mouth opening", "pharynx opening"; "Planarian_Anatomy"; rdfs:label "oral opening" . _:68a8aa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68a8ba a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68a8ca a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68a8da a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68a8ea a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68a8fa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68a90a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68a91a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68a92a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68a93a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68a94a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68a95a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68a96a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "The orifice that connects the mouth to the exterior of the body."; "UBERON:0000166" . a owl:Class; rdfs:subClassOf , , _:68a97a, _:68a98a, _:68a99a, _:68a9aa; "Anatomical space between the pharynx and the epithelial cells comprising parapharyngeal pouch."; ; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "OCLC:16809160"; "pharnygeal cavity", "pharyngeal pouch cavity"; "Planarian_Anatomy"; rdfs:label "pharynx pouch cavity" . _:68a97a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68a98a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68a99a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68a9aa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68a9ba a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Anatomical space between the pharynx and the epithelial cells comprising parapharyngeal pouch."; "OCLC:16809160" . _:68a9ca a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget ; rdfs:comment "Depicted by field contains hematoxylin and eosin stainingcoronal section section of a asexual adult animal. Parapharyngeal pouch cavity is indicated by arrows. Scale bar = 250um" . a owl:Class; owl:equivalentClass _:68a9da; rdfs:subClassOf , _:68aa2a, _:68aa3a; "The apical surface of the single layered epidermis that is in contact with the environment."; ; "apical surface of epidermis"; "Planarian_Anatomy"; "PLANA:0000409"; rdfs:label "apical surface of the epidermis" . _:68a9da a owl:Class; owl:intersectionOf _:68a9fa . _:68a9fa rdf:first _:68a9ea; rdf:rest _:68aa1a . _:68a9ea a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68aa1a rdf:first _:68aa0a; rdf:rest rdf:nil . _:68aa0a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68aa2a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68aa3a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68aa4a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget ; rdfs:comment "Electron micrograph of the dorsal epidermis in a transverse plane from an asexual adult animal. The apical epidermis surface is noted with magenta arrows. Scale bar is 5um." . a owl:Class; owl:equivalentClass _:68aa5a; rdfs:subClassOf , _:68aaaa, _:68aaba; "The basal surface of the epidermis in direct contact with the basal lamina."; ; "basal surface of epidermis"; "Planarian_Anatomy"; "PLANA:0000410"; rdfs:label "basal surface of the epidermis" . _:68aa5a a owl:Class; owl:intersectionOf _:68aa7a . _:68aa7a rdf:first _:68aa6a; rdf:rest _:68aa9a . _:68aa6a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68aa9a rdf:first _:68aa8a; rdf:rest rdf:nil . _:68aa8a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68aaaa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68aaba a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68aaca a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget ; rdfs:comment "Electron micrograph of the dorsal epidermis in a transverse plane. The basal epidermis surface is noted with magenta arrows. Scale bar is 5um." . a owl:Class; rdfs:subClassOf , _:68aada, _:68aaea, _:68aafa, _:68ab0a; "The surface of the gastrodermis in contact with the gut lumen."; ; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "PMID:21664348"; "lumen gut surface"; "Planarian_Anatomy"; rdfs:label "gastrodermis surface" . _:68aada a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68aaea a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68aafa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68ab0a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68ab1a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "The surface of the gastrodermis in contact with the gut lumen."; "PMID:21664348" . _:68ab2a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget ; rdfs:comment "The depicted by field is a hemotoxylin and eosin stained coronal section encompassing the anterior primary gut branch. The lumen gut surface is marked by black arrows. Scale bar is 200um." . a owl:Class; rdfs:subClassOf , _:68ab3a, _:68ab4a, _:68ab5a, _:68ab6a; "The epithelial surface lining the interior of the pharynx, facing the lumen."; ; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "UBERON:0001731"; "pharyngeal inner epidermis surface", "pharyngeal inner epithelial surface", "pharyngeal lumen epithelial surface", "pharynx inner epidermis surface", "pharynx lumen epithelial surface"; "Planarian_Anatomy"; rdfs:label "pharynx inner epithelium surface" . _:68ab3a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68ab4a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68ab5a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68ab6a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68ab7a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget ; rdfs:comment "Image is an electron micrograph of a transverse section through the pharynx. An epidermal cell, a part of the inner epithelial layer, has been marked with arrowheads. Immediately deep to the inner epithelial layer of the pharynx is musculature that has been colored. Magenta = circular; blue = longitudinal; yellow = radial. Scale bar is 5 um." . a owl:Class; rdfs:subClassOf , _:68ab8a, _:68ab9a, _:68abaa, _:68abba; "Epithelial surface covering the outside of the pharynx."; ; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "PMID:24120894", "PMID:29865769", "doi:10.1002/jmor.1052060308"; "pharyngeal outer epidermis surface", "pharyngeal outer epithelial surface", "pharynx outer epidermis surface", "pharynx outer side"; "Planarian_Anatomy"; rdfs:label "pharynx outer epithelium surface" . _:68ab8a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68ab9a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68abaa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68abba a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68abca a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Epithelial surface covering the outside of the pharynx."; "PMID:29865769", "doi:10.1002/jmor.1052060308" . _:68abda a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget ; rdfs:comment "Image is an electron micrograph of a transverse section through the pharynx. The pharynx pouch cavity is at the top. The outer epithelium has been labeled with arrowheads. Immediately deep to the outer epithelial layer of the pharynx is musculature that has been colored. Red = circular; blue = longitudinal. Scale bar is 2 um." . a owl:Class; rdfs:subClassOf , _:68abea, _:68abfa, _:68ac0a, _:68ac1a; "The surface of the parapharyngeal pouch facing the pharynx."; ; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "OCLC:16809160"; "pharyngeal pouch surface", "pharynx pouch surface"; "Planarian_Anatomy"; rdfs:label "pharynx pouch epithelial surface" . _:68abea a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68abfa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68ac0a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68ac1a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68ac2a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "The surface of the parapharyngeal pouch facing the pharynx."; "OCLC:16809160" . _:68ac3a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget ; rdfs:comment "The depicted by field is a hemotoxylin and eosin stained coronal section encompassing the pharynx and surrounding tissues. Anterior is up. The parapharyngeal pouch surface is marked by black arrows. Scale bar is 200um." . a owl:Class; ; rdfs:comment "replacing with UBERON term"; rdfs:label "obsolete organism subdivision"; owl:deprecated true . a owl:Class; rdfs:subClassOf ; "Anatomical structure which is a subdivision of a whole adult or juvenile organism, consisting of components of multiple anatomical systems."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "Planarian_Anatomy"; rdfs:label "definitive organism subdivision" . a owl:Class; rdfs:subClassOf , , _:68ac4a, _:68ac5a, _:68ac6a, _:68ac7a, _:68ac8a, _:68ac9a; "The head is the anterior-most division of the body [GO]. A three dimensional compartment bounded by the anterior margin or the head and the posterior boundary of the cephalic ganglia (brain)."; ; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "UBERON:0000033"; "head"; "Planarian_Anatomy"; rdfs:label "head region" . _:68ac4a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68ac5a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68ac6a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68ac7a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68ac8a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68ac9a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68acaa a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget ; rdfs:comment "Depicted by field contains diagram representation of body region." . a owl:Class; rdfs:subClassOf , , _:68acba, _:68acca, _:68acda, _:68acea, _:68acfa, _:68ad0a; "Region of the juvenile or adult animal between the posterior end of the cephalic ganglia and the anterior end of the pharynx."; ; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "OCLC:16809160", "PMID:17251262", "PMID:18202849", "PMID:18287199", "PMID:21295481", "PMID:21852957", "PMID:22339734", "PMID:23318641", "PMID:24120894", "PMID:24922054", "PMID:26556349", "PMID:27063937", "PMID:27150006", "PMID:28216315", "PMID:28245923", "PMID:28287248", "PMID:28893948", "PMID:29547123", "PMID:29674431", "https://doi.org/10.1101/279364"; "neck", "pre-pharyngeal region", "pre-pharynx region"; "Planarian_Anatomy"; rdfs:label "prepharyngeal region" . _:68acba a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68acca a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68acda a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68acea a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68acfa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68ad0a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68ad1a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Region of the juvenile or adult animal between the posterior end of the cephalic ganglia and the anterior end of the pharynx."; "OCLC:16809160" . _:68ad2a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget ; rdfs:comment "Depicted by field contains diagram representation of body region." . a owl:Class; rdfs:subClassOf , , _:68ad3a, _:68ad4a, _:68ad5a, _:68ad6a, _:68ad7a, _:68ad8a; "Region of the animal lateral to and surrounding the pharynx."; ; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "PMID:22125640", "PMID:25956527", "PMID:26651295", "PMID:28807897", "PMID:29674431", "PMID:30143032"; "para-pharyngeal", "parapharyngeal", "peri-pharyngeal", "peripharyngeal region", "trunk"; "Planarian_Anatomy"; rdfs:comment "Trunk is a synonym here because the parapharyngeal region is always contained in a trunk fragment. However, a trunk fragment may also contain some neck and some tail."; rdfs:label "parapharyngeal region" . _:68ad3a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68ad4a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68ad5a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68ad6a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68ad7a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68ad8a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68ad9a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget ; rdfs:comment "Depicted by field contains diagram representation of body region." . a owl:Class; rdfs:subClassOf , , _:68adaa, _:68adba, _:68adca, _:68adda, _:68adea, _:68adfa, _:68ae0a; "Caudal region, beginning at the mouth and ending at posterior pole."; ; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "UBERON:0002415"; "tail"; "Planarian_Anatomy"; rdfs:label "tail region" . _:68adaa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68adba a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68adca a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68adda a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68adea a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68adfa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68ae0a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68ae1a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget ; rdfs:comment "Depicted by field contains diagram representation of body region." . a owl:Class; rdfs:subClassOf , , _:68ae2a, _:68ae3a, _:68ae4a, _:68ae5a; "Medial region of the tail; the parenchymal space between the posterior primary gut branches."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "Planarian_Anatomy"; rdfs:label "tail stripe" . _:68ae2a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68ae3a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68ae4a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68ae5a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68ae6a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Medial region of the tail; the parenchymal space between the posterior primary gut branches."; "PMID:29906446" . a owl:Class; rdfs:subClassOf ; "Anatomical structure which is a subdivision of a whole developing/ embryonic organism, consisting of components of multiple anatomical systems."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "Planarian_Anatomy"; rdfs:label "embryonic subdivision" . a owl:Class; ; rdfs:comment "replacing with UBERON term"; rdfs:label "obsolete material anatomical entity"; owl:deprecated true . a owl:Class; rdfs:comment "extra layer of complexity not needed upon further examination"; rdfs:label "obsolete definitive anatomical structure"; owl:deprecated true . a owl:Class; ; rdfs:comment "replacing with UBERON term"; rdfs:label "obsolete acellular anatomical structure"; owl:deprecated true . a owl:Class; rdfs:subClassOf ; "An anatomical structure that has more than one cell as a part."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "UBERON:0010000"; "Planarian_Anatomy"; rdfs:label "multicellular anatomical structure" . _:68ae7a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "An anatomical structure that has more than one cell as a part."; "UBERON:0010000" . a owl:Class; rdfs:subClassOf , _:68ae8a, _:68ae9a; "Total musculature of the planarian body."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "ISBN:9780070316607", "PMID:15866156", "PMID:17942485", "PMID:20707997", "PMID:24950970", "PMID:27068018", "PMID:28137894", "UBERON:0001015"; "muscular system", "musculature"; "Planarian_Anatomy"; rdfs:label "musculature system" . _:68ae8a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68ae9a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68aeaa a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Total musculature of the planarian body."; "UBERON:0001015" . a owl:Class; rdfs:subClassOf , , , _:68aeba, _:68aeca, _:68aeda, _:68aeea, _:68aefa, _:68af0a, _:68af1a, _:68af2a, _:68af3a, _:68af4a, _:68af5a, _:68af6a, _:68af7a, _:68af8a, _:68af9a, _:68afaa, _:68afba; "A heterogeneous population of pluripotent, somatic adult stem cells and lineage primed progenitors that are required for maintenance and regeneration of all cell types in planaria, including the germline."; ; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "BTO:0006347", "PMID:15866156", "PMID:15972844", "PMID:16033796", "PMID:16311336", "PMID:16344473", "PMID:16890156", "PMID:17251262", "PMID:17376870", "PMID:17390146", "PMID:17553481", "PMID:17670787", "PMID:17905225", "PMID:18063755", "PMID:18202849", "PMID:18287199", "PMID:18456843", "PMID:18786419", "PMID:19048075", "PMID:19174194", "PMID:19247960", "PMID:19564616", "PMID:19766622", "PMID:19805089", "PMID:20040488", "PMID:20215344", "PMID:20223763", "PMID:20599901", "PMID:20844018", "PMID:21179477", "PMID:21179478", "PMID:21282632", "PMID:21356107", "PMID:21458439", "PMID:21566185", "PMID:21664348", "PMID:21747960", "PMID:21806978", "PMID:21852957", "PMID:21894189", "PMID:21937596", "PMID:22125640", "PMID:22223737", "PMID:22252538", "PMID:22252539", "PMID:22318224", "PMID:22339734", "PMID:22371573", "PMID:22385657", "PMID:22411224", "PMID:22427692", "PMID:22439894", "PMID:22445864", "PMID:22451003", "PMID:22479207", "PMID:22543868", "PMID:22549959", "PMID:22696458", "PMID:22884275", "PMID:22899852", "PMID:23079596", "PMID:23235145", "PMID:23250205", "PMID:23297191", "PMID:23318635", "PMID:23318641", "PMID:23405188", "PMID:23629965", "PMID:23903188", "PMID:23954785", "PMID:24040508", "PMID:24063805", "PMID:24120894", "PMID:24131630", "PMID:24173799", "PMID:24238224", "PMID:24367277", "PMID:24415944", "PMID:24523458", "PMID:24704339", "PMID:24737865", "PMID:24903754", "PMID:24922054", "PMID:24992682", "PMID:25017721", "PMID:25254346", "PMID:25278423", "PMID:25356635", "PMID:25956527", "PMID:26057828", "PMID:26114597", "PMID:26457503", "PMID:26459857", "PMID:26516985", "PMID:26525673", "PMID:26556349", "PMID:26618653", "PMID:26651295", "PMID:26884331", "PMID:27013241", "PMID:27063937", "PMID:27068018", "PMID:27122174", "PMID:27149082", "PMID:27150006", "PMID:27163480", "PMID:27304889", "PMID:27441386", "PMID:27501047", "PMID:27502555", "PMID:27523733", "PMID:27542689", "PMID:27551436", "PMID:27606067", "PMID:27612384", "PMID:27654173", "PMID:27864883", "PMID:28072387", "PMID:28137894", "PMID:28171748", "PMID:28216315", "PMID:28287248", "PMID:28292427", "PMID:28461239", "PMID:28686611", "PMID:28757112", "PMID:28893948", "PMID:29095551", "PMID:29100657", "PMID:29124009", "PMID:29273738", "PMID:29291974", "PMID:29364871", "PMID:29547123", "PMID:29557542", "PMID:29674431", "PMID:29674432", "PMID:29906446", "PMID:30143032", "PMID:30194301", "PMID:30237141", "PMID:30282036", "PMID:30297872", "PMID:30471994", "PMID:30485821", "PMID:30729158", "PMID:30962434", "https://doi.org/10.1101/279364", "https://github.com/obophenotype/planaria-ontology/blob/master/metadata/planarefs/planaref-0000004.md"; "ASC", "adult somatic stem cell", "adult stem cell", "cycling cell", "irradiation-sensitive cell", "neoblast compartment", "pASC", "planarian adult stem cell", "planarian stem cell", "somatic stem cell"; "Planarian_Anatomy"; rdfs:label "neoblast" . _:68aeba a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68aeca a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68aeda a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68aeea a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68aefa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68af0a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68af1a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68af2a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68af3a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68af4a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68af5a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68af6a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68af7a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68af8a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68af9a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68afaa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68afba a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68afca a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "A heterogeneous population of pluripotent, somatic adult stem cells and lineage primed progenitors that are required for maintenance and regeneration of all cell types in planaria, including the germline."; "PMID:16311336", "PMID:21566185", "PMID:22899852", "https://github.com/obophenotype/planaria-ontology/blob/master/metadata/planarefs/planaref-0000004.md" . _:68afda a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget ; rdfs:comment "Image is an electron micrograph showing a neoblast undergoing mitotic telophase (outlined). The condensed chromatin is visible toward the left side of the cell and has been outlined by the nuclear envelope. Scale bar is 1um." . a owl:Class; rdfs:subClassOf , _:68afea; "A part of an epithelial cell."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "Planarian_Anatomy"; rdfs:label "epithelial cell component" . _:68afea a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf ; "Anatomical structure that performs a specific function or group of functions."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "PMID:29547123", "UBERON:0000062"; "Planarian_Anatomy"; rdfs:label "organ" . _:68affa a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Anatomical structure that performs a specific function or group of functions."; "UBERON:0000062" . a owl:Class; ; rdfs:comment "replacing with UBERON term"; rdfs:label "obsolete regenerating anatomical structure"; owl:deprecated true . a owl:Class; ; rdfs:comment "replacing with GO term"; rdfs:label "obsolete cellular component"; owl:deprecated true . a owl:Class; rdfs:subClassOf , , _:68b00a, _:68b01a, _:68b02a, _:68b03a, _:68b04a, _:68b05a; "A decussation of the diencephalon where the fibers of the optic nerve cross"; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "AAO:0010622", "BAMS:DC", "BAMS:OC", "BAMS:och", "BAMS:ox", "BM:Tel-OCX", "C90609", "DHBA:10644", "DMBA:17783", "EHDAA2:0001302", "EHDAA:10227", "EMAPA:17603", "FMA:62045", "GAID:832", "HBA:9310", "MA:0001098", "MBA:117", "MESH:D009897", "NCIT:C90609", "Optic:chiasm", "PMID:15866156", "PMID:16033796", "PMID:17553481", "PMID:17905225", "PMID:18202849", "PMID:18466009", "PMID:19048075", "PMID:19211673", "PMID:21282632", "PMID:22339734", "PMID:22445864", "PMID:25356635", "PMID:25493551", "PMID:26618653", "PMID:27800171", "PMID:28495872", "PMID:30194301", "PMID:30962434", "TAO:0000556", "UBERON:0000959", "UMLS:C0029126", "VHOG:0000190", "XAO:0004071", "ZFA:0000556", "birnlex:1416", "http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=459", "http://linkedlifedata.com/resource/umls/id/C0029126", "http://www.snomedbrowser.com/Codes/Details/244453006"; "chiasm", "chiasma", "chiasma nervorum opticorum", "chiasma opticum", "decussation of optic nerve fibers", "optic chiasm (Rufus of Ephesus)", "optic chiasma", "optic chiasmata"; "Planarian_Anatomy"; rdfs:label "optic chiasm" . _:68b00a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68b01a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68b02a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68b03a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68b04a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68b05a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68b06a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "A decussation of the diencephalon where the fibers of the optic nerve cross"; "PMID:18466009" . a owl:Class; rdfs:subClassOf , _:68b07a, _:68b08a, _:68b09a; "A bundle of nerve fibers connecting the two cephalic ganglia."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "UBERON:0000935"; "anterior brain commissure"; "Planarian_Anatomy"; rdfs:label "anterior commissure" . _:68b07a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68b08a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68b09a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68b0aa a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "A bundle of nerve fibers connecting the two cephalic ganglia."; "UBERON:0000935" . a owl:Class; rdfs:subClassOf , , _:68b0ba, _:68b0ca, _:68b0da, _:68b0ea, _:68b0fa, _:68b10a, _:68b11a; "Nerve branches that extend from the lateral side of each cephalic ganglia lobe. Each lobe has nine lateral branches which terminate in sensory organs. Evidence suggests they play a role in chemosensation."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "ISBN:9780070316607", "PMID:12128224", "PMID:18287199", "PMID:18466009", "PMID:20422023", "PMID:21282632", "PMID:21806978", "PMID:24922054", "PMID:25254346", "PMID:27612384", "PMID:29674431", "PMID:30399335", "PMID:4452894", "PMID:9493832"; "bilateral cephalic ganglia branch", "brain branch", "cephalic brain branch", "cephalic branch", "lateral brain branch"; "Planarian_Anatomy"; rdfs:label "lateral branch" . _:68b0ba a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68b0ca a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68b0da a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68b0ea a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68b0fa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68b10a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68b11a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68b12a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Nerve branches that extend from the lateral side of each cephalic ganglia lobe. Each lobe has nine lateral branches which terminate in sensory organs. Evidence suggests they play a role in chemosensation."; "PMID:12128224", "PMID:18466009", "PMID:27612384", "PMID:4452894", "PMID:9493832" . a owl:Class; rdfs:subClassOf ; "A cell that performs a sensory function."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "BTO:0001037", "ISBN:9780070316607", "NCIT:C12628", "PMID:17251262", "PMID:17942485"; "Planarian_Anatomy"; rdfs:label "sensory cell" . a owl:Class; rdfs:subClassOf , , _:68b13a, _:68b14a, _:68b15a; "Neurons that express choline acetyltransferase."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "PMID:20338223", "PMID:21566185", "PMID:23652002", "PMID:23903188", "PMID:24131630", "PMID:24173799", "PMID:24950970", "PMID:25356635", "PMID:26525673", "PMID:27163480", "PMID:27612382", "PMID:27864883", "PMID:28126842", "PMID:28137894", "PMID:29291981", "PMID:30143032", "PMID:30194301"; "acetylcholinergic neuron"; "Planarian_Anatomy"; rdfs:label "cholinergic neuron" . _:68b13a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68b14a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68b15a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68b16a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Neurons that express choline acetyltransferase."; "PMID:20338223" . a owl:Class; rdfs:subClassOf , , _:68b17a, _:68b18a, _:68b19a; "Neurons that express glutamine decarboxylase."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "CL:0000617", "FBbt:00007228", "PMID:18440152", "PMID:23903188", "PMID:24131630", "PMID:24173799", "PMID:24922054", "PMID:24950970", "PMID:25356635", "PMID:26525673", "PMID:27864883", "PMID:28216315", "PMID:29291981", "PMID:30194301", "PMID:30485821", "WBbt:0005190", "ZFA:0009276"; "GABA neuron", "GABAergic cell", "gabanergic neuron", "inhibitory neuron"; "Planarian_Anatomy"; rdfs:label "GABAergic neuron" . _:68b17a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68b18a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68b19a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68b1aa a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Neurons that express glutamine decarboxylase."; "PMID:18440152" . a owl:Class; rdfs:subClassOf , , _:68b1ba, _:68b1ca, _:68b1da, _:68b1ea, _:68b1fa; "Plexus of nerves located in the pharynx comprised of inner and outer wall rings."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "PMID:16033796", "PMID:17905225", "PMID:20967238" . _:68b1ba a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68b1ca a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68b1da a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68b1ea a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68b1fa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . "PMID:23250205", "PMID:23297191"; "nerve ganglia of pharynx", "neural plexus of the pharynx", "pharyngeal nerve plexus", "pharyngeal nerve ring", "pharyngeal nervous system", "pharyngeal neural plexus", "pharynx nerve ring"; "Planarian_Anatomy"; rdfs:label "pharynx nerve plexus" . a owl:Class; rdfs:subClassOf , , _:68b20a, _:68b21a, _:68b22a, _:68b23a, _:68b24a, _:68b25a, _:68b26a, _:68b27a, _:68b28a, _:68b29a, _:68b2aa, _:68b2ba, _:68b2ca; "Plexus of nerves located just between the epidermis and the body wall musculature."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "PMID:27612384", "doi:10.1002/jmor.1051550208"; "Planarian_Anatomy"; rdfs:label "subepidermal nerve plexus" . _:68b20a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68b21a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68b22a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68b23a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68b24a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68b25a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68b26a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68b27a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68b28a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68b29a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68b2aa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68b2ba a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68b2ca a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , , _:68b2da, _:68b2ea, _:68b2fa, _:68b30a, _:68b31a, _:68b32a, _:68b33a, _:68b34a, _:68b35a, _:68b36a, _:68b37a, _:68b38a, _:68b39a; "Plexus of nerves that innervate the body wall musculature."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "Planarian_Anatomy"; rdfs:label "submuscular nerve plexus" . _:68b2da a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68b2ea a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68b2fa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68b30a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68b31a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68b32a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68b33a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68b34a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68b35a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68b36a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68b37a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68b38a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68b39a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , , _:68b3aa, _:68b3ba, _:68b3ca, _:68b3da, _:68b3ea, _:68b3fa, _:68b40a, _:68b41a, _:68b42a, _:68b43a, _:68b44a; "A thin net of single nerve fibers located around the gut."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "PMID:17999079", "doi.org/10.1002/jmor.1051550208"; "Planarian_Anatomy"; rdfs:label "gastrodermal plexus" . _:68b3aa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68b3ba a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68b3ca a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68b3da a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68b3ea a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68b3fa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68b40a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68b41a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68b42a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68b43a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68b44a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , , _:68b45a, _:68b46a, _:68b47a, _:68b48a, _:68b49a, _:68b4aa, _:68b4ba; "A cluster of neurites that is part of a nervous system and forms a network of dendrites and axons where synapses are present and in which neuronal somata do not occur."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "BTO:0005268", "C12617", "CALOHA:TS-2403", "FBbt:00005139", "FMA:261269", "GAID:740", "MESH:D019581", "NIF:Subcellular:sao205380252", "PMID:16033796", "PMID:17553481", "PMID:24173799", "PMID:24950970", "PMID:25356635", "PMID:27612382", "PMID:27612384", "PMID:29291974", "PMID:29291981", "UBERON:0002606", "UMLS:C0228081", "birnlex:1142", "http://en.wikipedia.org/wiki/Neuropil", "http://linkedlifedata.com/resource/umls/id/C0228081", "http://www.snomedbrowser.com/Codes/Details/67146008"; "central neuropil", "cephalic ganglia neuropil", "neuropilus"; "Planarian_Anatomy"; rdfs:label "neuropil" . _:68b45a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68b46a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68b47a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68b48a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68b49a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68b4aa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68b4ba a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68b4ca a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "A cluster of neurites that is part of a nervous system and forms a network of dendrites and axons where synapses are present and in which neuronal somata do not occur."; "PMID:27612384" . a owl:Class; rdfs:subClassOf , , _:68b4da, _:68b4ea, _:68b4fa, _:68b50a, _:68b51a, _:68b52a, _:68b53a; "Heavily ciliated epidermal cells covering the outer surface of the pharynx shaft. These are \"insunk\" epidermal cells in which the nuclei reside behind the layers of longitudinal and circumferential muscles and the epithelial cell body sends out a ciliated projection to the surface to cover and encase the shaft."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "ASIN:B000M4NK9M", "PMID:29674431"; "epithelial pharynx lining", "outer pharyngeal epidermis", "outer pharyngeal epithelium", "outer pharynx epidermis", "outer pharynx epithelium"; "Planarian_Anatomy"; rdfs:label "pharynx outer epithelium" . _:68b4da a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68b4ea a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68b4fa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68b50a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68b51a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68b52a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68b53a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68b54a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Heavily ciliated epidermal cells covering the outer surface of the pharynx shaft. These are \"insunk\" epidermal cells in which the nuclei reside behind the layers of longitudinal and circumferential muscles and the epithelial cell body sends out a ciliated projection to the surface to cover and encase the shaft."; "ASIN:B000M4NK9M" . a owl:Class; rdfs:subClassOf , _:68b55a; "Pharynx muscle fibers thar run circumferentially about the pharynx and lie just beneath the outer longitudinal pharynx muscles."; ; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "ASIN:B000M4NK9M", "ISBN:9780070316607"; "outer circular muscle layer", "pharyneal outer circular muscle fiber", "pharyngeal outer circular muscle cell", "pharynx outer circular muscle fiber"; "Planarian_Anatomy"; rdfs:label "pharynx outer circular muscle cell" . _:68b55a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68b56a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Pharynx muscle fibers thar run circumferentially about the pharynx and lie just beneath the outer longitudinal pharynx muscles."; "ASIN:B000M4NK9M" . _:68b57a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget ; rdfs:comment "Image is an electron micrograph of a transverse section through the pharynx. The pharynx pouch cavity is at the top. The outer circular muscle (arrowheads) is immediately deep to the outer longitudinal muscle of the pharynx. Red = circular; blue = longitudinal. Scale bar is 2 um." . a owl:Class; rdfs:subClassOf , _:68b58a, _:68b59a; "Pharynx muscle fiber that runs circumferentially about the pharynx and lies just beneath the inner logitudinal pharynx muscle fibers."; ; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "ASIN:B000M4NK9M"; "inner circular muscle layer", "pharyngeal inner circular muscle cell", "pharyngeal inner circular muscle fiber", "pharynx inner circular muscle fiber"; "Planarian_Anatomy"; rdfs:label "pharynx inner circular muscle cell" . _:68b58a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68b59a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68b5aa a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Pharynx muscle fiber that runs circumferentially about the pharynx and lies just beneath the inner logitudinal pharynx muscle fibers."; "ASIN:B000M4NK9M" . _:68b5ba a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget ; rdfs:comment "Image is an electron micrograph of a transverse section through the pharynx. The pharynx lumen it to the left. The inner circular muscle (arrowheads) is immediately deep to the inner epithelial layer of the pharynx. Magenta = circular; green = longitudinal; red = radial. Scale bar is 2 um." . a owl:Class; rdfs:subClassOf , _:68b5ca; "Pharynx muscle fibers running anteroposterior which lie beneath both the inner circular muscle fibers and the apical, ciliated portion of the epithium lining the lumenal surface."; ; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "ASIN:B000M4NK9M", "ISBN:9780070316607"; "inner longitudinal muscle layer", "pharyngeal inner longitudinal muscle cell", "pharyngeal inner longitudinal muscle fiber", "pharynx inner longitudinal muscle fiber"; "Planarian_Anatomy"; rdfs:label "pharynx inner longitudinal muscle cell" . _:68b5ca a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68b5da a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Pharynx muscle fibers running anteroposterior which lie beneath both the inner circular muscle fibers and the apical, ciliated portion of the epithium lining the lumenal surface."; "ASIN:B000M4NK9M" . _:68b5ea a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget ; rdfs:comment "Image is an electron micrograph of a transverse section through the pharynx. The inner longitudinal muscle (arrowheads) is immediately deep to the inner circular muscle of the pharynx. Magenta = circular; green = longitudinal; red = radial. Scale bar is 2 um." . a owl:Class; rdfs:subClassOf , _:68b5fa, _:68b60a; "Pharynx muscle fibers running anteroposterior which lie just underneath the apical, cilaited portion of the outer epithelium."; ; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "ASIN:B000M4NK9M"; "pharyngeal outer longitudinal muscle cell", "pharyngeal outer longitudinal muscle fiber", "pharynx outer longitudinal muscle fiber"; "Planarian_Anatomy"; rdfs:label "pharynx outer longitudinal muscle cell" . _:68b5fa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68b60a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68b61a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Pharynx muscle fibers running anteroposterior which lie just underneath the apical, cilaited portion of the outer epithelium."; "ASIN:B000M4NK9M" . _:68b62a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget ; rdfs:comment "Image is an electron micrograph of a transverse section through the pharynx. The pharynx pouch cavity is at the top. The outer longitudinal muscle (arrowheads) is immediately deep to the outer epithelium of the pharynx. Red = circular; blue = longitudinal. Scale bar is 2 um." . a owl:Class; rdfs:subClassOf , , _:68b63a, _:68b64a, _:68b65a, _:68b66a, _:68b67a, _:68b68a; "Pharynx muscle fibers that run radially, connecting the outer muscle fibers and epithelia with their inner counterparts."; ; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "ASIN:B000M4NK9M", "PMID:28072387"; "pharyngeal radial muscle cell", "pharyngeal radial muscle fiber", "pharynx radial muscle fiber", "radial muscle cell", "radial muscle fiber"; "Planarian_Anatomy"; rdfs:label "pharynx radial muscle cell" . _:68b63a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68b64a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68b65a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68b66a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68b67a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68b68a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68b69a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Pharynx muscle fibers that run radially, connecting the outer muscle fibers and epithelia with their inner counterparts."; "ASIN:B000M4NK9M" . _:68b6aa a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget ; rdfs:comment "Image is an electron micrograph of a transverse section through the pharynx. Immediately deep to the inner epithelial layer of the pharynx is musculature that has been colored. Magenta = circular; blue = longitudinal; yellow = radial. Scale bar is 5 um." . a owl:Class; rdfs:subClassOf , , _:68b6ba, _:68b6ca, _:68b6da, _:68b6ea, _:68b6fa, _:68b70a; "The total musculature within the pharynx."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "ISBN:9780070316607", "PMID:26904543", "PMID:29674432", "UBERON:0004467"; "pharyngeal musculature", "pharynx muscle", "pharynx musculature"; "Planarian_Anatomy"; rdfs:label "pharynx musculature" . _:68b6ba a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68b6ca a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68b6da a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68b6ea a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68b6fa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68b70a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68b71a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "The total musculature within the pharynx."; "PMID:26904543" . a owl:Class; rdfs:subClassOf , _:68b72a; "Ring of the pharynx nerve plexus that is proximal to the lumen."; ; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "ISBN:9780070316607"; "inner pharyngeal nerve ring", "inner pharynx nerve ring", "pharynx inner nerve plexus"; "Planarian_Anatomy"; rdfs:label "pharynx inner nerve plexus" . _:68b72a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68b73a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Ring of the pharynx nerve plexus that is proximal to the lumen."; "ISBN:9780070316607" . _:68b74a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget ; rdfs:comment "Image is an electron micrograph of a transverse section through the pharynx. Neuronal cells/tissue are marked with arrowheads. The inner nerve plexus is immediately deep to the inner longitudinal musculature. Magenta = circular; blue = longitudinal; yellow = radial. Scale bar is 5 um." . a owl:Class; rdfs:subClassOf , _:68b75a; "Ring of the pharynx nerve plexus that is proximal to the exterior surface."; ; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "ISBN:9780070316607", "PMID:27612384", "doi:10.1002/jmor.1051550208"; "outer pharyngeal nerve ring", "outer pharynx nerve plexus", "outer pharynx nerve ring"; "Planarian_Anatomy"; rdfs:label "pharynx outer nerve plexus" . _:68b75a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68b76a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Ring of the pharynx nerve plexus that is proximal to the exterior surface."; "ISBN:9780070316607" . _:68b77a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget ; rdfs:comment "Image is an electron micrograph of a transverse section through the pharynx.The pharynx pouch cavity is at the top. The outer nerve plexus (arrowheads) is immediately deep to the outer circular muscle of the pharynx. Red = circular; blue = longitudinal. Scale bar is 2 um." . a owl:Class; rdfs:subClassOf , , _:68b78a, _:68b79a, _:68b7aa, _:68b7ba, _:68b7ca, _:68b7da, _:68b7ea, _:68b7fa, _:68b80a, _:68b81a, _:68b82a, _:68b83a, _:68b84a, _:68b85a, _:68b86a; "Neurons that express the neurotransmitter serotonin."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "CL:0000850", "FBbt:00005133", "PMID:23903188", "PMID:24131630", "PMID:24173799", "PMID:24922054", "PMID:24950970", "PMID:25356635", "PMID:26525673", "PMID:27864883", "PMID:28137894", "PMID:29357350", "PMID:30194301", "WBbt:0006837", "ZFA:0009361"; "serotonergic cell"; "Planarian_Anatomy"; rdfs:label "serotonergic neuron" . _:68b78a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68b79a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68b7aa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68b7ba a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68b7ca a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68b7da a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68b7ea a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68b7fa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68b80a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68b81a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68b82a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68b83a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68b84a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68b85a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68b86a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68b87a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Neurons that express the neurotransmitter serotonin."; "PMID:17624455" . a owl:Class; rdfs:subClassOf , , _:68b88a, _:68b89a, _:68b8aa; "A neuron that expresses the neurotransmitter dopamine."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "CL:0000700", "FBbt:00005131", "PMID:17565705", "PMID:21458439", "PMID:23250205", "PMID:23903188", "PMID:24131630", "PMID:24173799", "PMID:24950970", "PMID:25356635", "PMID:27864883", "PMID:30194301", "WBbt:0006746", "ZFA:0009301"; "Planarian_Anatomy"; rdfs:label "dopaminergic neuron" . _:68b88a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68b89a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68b8aa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68b8ba a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "A neuron that expresses the neurotransmitter dopamine."; "PMID:17565705" . a owl:Class; rdfs:subClassOf , , _:68b8ca, _:68b8da, _:68b8ea; "Neurons that express the biogenic amine octopamine."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "FBbt:00007364", "PMID:18926867"; "Planarian_Anatomy"; rdfs:label "octopaminergic neuron" . _:68b8ca a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68b8da a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68b8ea a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68b8fa a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Neurons that express the biogenic amine octopamine."; "PMID:18926867" . a owl:Class; rdfs:subClassOf , _:68b90a, _:68b91a; "Anatomical system that has as its parts cells and glands devoted to the discharge of substances such as mucus."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "PMID:20865784", "WBbt:0006850"; "Planarian_Anatomy"; rdfs:label "secretory system" . _:68b90a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68b91a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68b92a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Anatomical system that has as its parts cells and glands devoted to the discharge of substances such as mucus."; "PMID:20865784" . a owl:Class; rdfs:subClassOf ; "Specialized insunk epithelial cells located in the mesenchyme that participate in mucus secretion. They are characterized by elongated cell bodies with long cytoplasmic projections that terminate between, or penetrate directly throughepithelial cells and form a secretory pore at the surface."; ; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "CLYH:1000090", "ISBN:9780070316607", "PMID:19247960", "PMID:20865784", "PMID:23318635", "PMID:24737865", "PMID:28807897", "PMID:29674431", "PMID:30962434", "WBbt:0003670"; "secretory gland cell"; "Planarian_Anatomy"; rdfs:label "gland cell" . _:68b93a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Specialized insunk epithelial cells located in the mesenchyme that participate in mucus secretion. They are characterized by elongated cell bodies with long cytoplasmic projections that terminate between, or penetrate directly throughepithelial cells and form a secretory pore at the surface."; "PMID:20865784" . _:68b94a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget ; rdfs:comment "Image is an electron micrograph depicting a portion of a gland cell (arrowheads). Note the nucleus surrounded by endoplasmic reticulum and the dark mucus granules that fill the long cytoplasmic projection. Scale bar is 2 um." . a owl:Class; rdfs:subClassOf , , _:68b95a, _:68b96a, _:68b97a; "The opening by which the gland cells secrete mucus to the exterior of the animal."; ; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "ISBN:9780070316607", "PMID:20865784"; "pore"; "Planarian_Anatomy"; rdfs:label "secretory pore" . _:68b95a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68b96a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68b97a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68b98a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "The opening by which the gland cells secrete mucus to the exterior of the animal."; "PMID:20865784" . _:68b99a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget ; rdfs:comment "Image is an electron micrograph of a viscid gland cell passing across the basal lamina (BL). This cell secretes a specialized type of mucus. The secretory duct transports mucus to the outside of the animal, through the secretory pore (arrowhead). Ventral is down and scale bar is 5um." . a owl:Class; rdfs:subClassOf ; "One of two distinct histochemical classes of gland cells, these can be found throughout the body but primarily form clusters of subepidermal marginal adhesive glands along the dorsoventral border of the animal."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "PMID:20865784"; "eosinophilic gland cell", "erythrophilous gland cell"; "Planarian_Anatomy"; rdfs:label "acidophilic gland cell" . _:68b9aa a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "One of two distinct histochemical classes of gland cells, these can be found throughout the body but primarily form clusters of subepidermal marginal adhesive glands along the dorsoventral border of the animal."; "PMID:20865784" . a owl:Class; rdfs:subClassOf ; "One of two distinct histochemical classes of gland cells, these are found near the ventral mesenchyme, the pharynx and in the dorsal region of the head. May also be called cyanophilic gland cells."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "ISBN:9780070316607", "PMID:20865784", "PMID:23405188"; "cyanophilic gland cell", "cyanophilic secretory cell", "cyanophilous gland"; "Planarian_Anatomy"; rdfs:label "basophilic gland cell" . _:68b9ba a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "One of two distinct histochemical classes of gland cells, these are found near the ventral mesenchyme, the pharynx and in the dorsal region of the head. May also be called cyanophilic gland cells."; "PMID:20865784" . a owl:Class; ; rdfs:comment "replacing with CARO term"; rdfs:label "obsolete anatomical line"; owl:deprecated true . a owl:Class; ; rdfs:comment "replacing with BSPO term"; rdfs:label "obsolete anatomical plane"; owl:deprecated true . a owl:Class; ; rdfs:comment "let odk import from BSPO if needed", "replacing with UBERON term"; rdfs:label "obsolete plane of autonomy", "obsolete plane of autotomy"; owl:deprecated true . a owl:Class; rdfs:subClassOf , _:68b9ca; "Anatomical junction where subdivisions of two or more neural trees interconnect with one another to form a network through which nerve fibers of the constituent nerve trees become regrouped; together with other nerve plexuses, nerves and ganglia, it constitutes the peripheral nervous system. Examples: cervical nerve plexus, brachial nerve plexus, sacral nerve plexus[FMA]."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "AEO:0000138", "BTO:0000205", "C12929", "EHDAA2:0003138", "EHDAA:3780", "FMA:5901", "ISBN:9780070316607", "MA:0002407", "PMID:16311336", "PMID:21566185", "PMID:22899852", "UBERON:0001810", "UMLS:C0501403", "http://en.wikipedia.org/wiki/Nervous:system:plexus", "http://linkedlifedata.com/resource/umls/id/C0501403", "http://www.snomedbrowser.com/Codes/Details/122455009", "https://github.com/obophenotype/planaria-ontology/blob/master/metadata/planarefs/planaref-0000004.md"; "neural network", "neural plexus", "plexus"; "Planarian_Anatomy"; rdfs:label "nerve plexus" . _:68b9ca a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68b9da a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Anatomical junction where subdivisions of two or more neural trees interconnect with one another to form a network through which nerve fibers of the constituent nerve trees become regrouped; together with other nerve plexuses, nerves and ganglia, it constitutes the peripheral nervous system. Examples: cervical nerve plexus, brachial nerve plexus, sacral nerve plexus[FMA]."; "UBERON:0001810" . a owl:Class; ; rdfs:comment "we will just use commissural neuron moving forward "; rdfs:label "obsolete nervous system commissure"; owl:deprecated true . a owl:Class; rdfs:subClassOf , , _:68b9ea, _:68b9fa, _:68ba0a, _:68ba1a; "any of the nerve fiber tracts that span the longitudinal fissure between the cerebral and/or cerebellar hemispheres of the brain"; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "UBERON:0005970"; "Planarian_Anatomy"; rdfs:label "brain commissure" . _:68b9ea a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68b9fa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68ba0a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68ba1a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68ba2a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "any of the nerve fiber tracts that span the longitudinal fissure between the cerebral and/or cerebellar hemispheres of the brain"; "UBERON:0005970" . a owl:Class; rdfs:subClassOf , _:68ba3a; "A regenerating tissue composed of a proliferative mass of undifferentiated progenitor cells from which new differentiated structures arise."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "", "AEO:0000192", "BTO:0001638", "CARO:0000010", "EFO:0003658", "FMA:50705", "PMID:15866156", "PMID:15972844", "PMID:16033796", "PMID:16890156", "PMID:17251262", "PMID:17553481", "PMID:17670787", "PMID:17905225", "PMID:17942485", "PMID:18063755", "PMID:18202849", "PMID:18456843", "PMID:19048075", "PMID:19174194", "PMID:19247960", "PMID:19766622", "PMID:19852954", "PMID:20040488", "PMID:20215344", "PMID:20223763", "PMID:20422023", "PMID:20599901", "PMID:21179478", "PMID:21295481", "PMID:21295483", "PMID:21356107", "PMID:21458439", "PMID:21566195", "PMID:21664348", "PMID:21806978", "PMID:21937596", "PMID:22125640", "PMID:22252539", "PMID:22318224", "PMID:22411224", "PMID:22439894", "PMID:22451003", "PMID:22479207", "PMID:22549959", "PMID:22884275", "PMID:22899852", "PMID:23235145", "PMID:23250205", "PMID:23318641", "PMID:23405188", "PMID:23629965", "PMID:23652002", "PMID:24040508", "PMID:24063805", "PMID:24120894", "PMID:24173799", "PMID:24415944", "PMID:24523458", "PMID:24704339", "PMID:24922054", "PMID:25254346", "PMID:25558068", "PMID:25725068", "PMID:25772472", "PMID:25956527", "PMID:26062938", "PMID:26459857", "PMID:26525673", "PMID:26711341", "PMID:26884331", "PMID:27013241", "PMID:27068018", "PMID:27240733", "PMID:27542689", "PMID:27551436", "PMID:27606067", "PMID:27612382", "PMID:27612384", "PMID:28126842", "PMID:28137894", "PMID:28171748", "PMID:28216315", "PMID:28461239", "PMID:28757112", "PMID:28807897", "PMID:28893948" . _:68ba3a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . "PMID:29158443", "PMID:29273738", "PMID:29291974", "PMID:29291981", "PMID:29357350", "PMID:30194301", "PMID:30237141", "PMID:30282036", "PMID:30297872", "PMID:30471994", "PMID:30485821", "PMID:30729158", "TAO:0001270", "UBERON:0005306", "XAO:0004060", "https://doi.org/10.1101/279364", "ncithesaurus:Blastemal_Cell"; "regeneration blastema", "regenerative blastema"; "Planarian_Anatomy"; rdfs:label "blastema" . _:68ba4a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "A regenerating tissue composed of a proliferative mass of undifferentiated progenitor cells from which new differentiated structures arise."; "UBERON:0005306" . a owl:Class; ; rdfs:comment "replacing with UBERON term"; rdfs:label "obsolete anatomical boundary"; owl:deprecated true . a owl:Class; ; rdfs:comment "replacing with UBERON term"; rdfs:label "obsolete anatomical junction"; owl:deprecated true . a owl:Class; ; rdfs:comment "replacing duplicate PLANA term"; rdfs:label "obsolete main body axis"; owl:deprecated true . a owl:Class; rdfs:subClassOf ; "A material entity of anatomical origin (part of or deriving from an organism) that has as its parts a maximally connected cell compartment surrounded by a plasma membrane."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "CALOHA:TS-2035", "CL:0000000", "FMA:68646", "GO:0005623", "KUPO:0000002", "VHOG:0001533", "WBbt:0004017", "XAO:0003012"; "Planarian_Anatomy"; rdfs:comment "The definition of cell is intended to represent all cells, and thus a cell is defined as a material entity and not an anatomical structure, which implies that it is part of an organism (or the entirety of one)."; rdfs:label "cell" . _:68ba5a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "A material entity of anatomical origin (part of or deriving from an organism) that has as its parts a maximally connected cell compartment surrounded by a plasma membrane."; "CL:0000000" . a owl:Class; ; rdfs:comment "PLANA:0000500 child terms moved to cellular component (GO:0005575) term and we think better serves interoperability and searchability"; rdfs:label "obsolete cell part"; owl:deprecated true . a owl:Class; rdfs:subClassOf ; "A prolongation or process extending from a cell."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "GO:0042995"; "Planarian_Anatomy"; rdfs:label "cell projection" . _:68ba6a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "A prolongation or process extending from a cell."; "GO:0042995" . a owl:Class; rdfs:subClassOf ; "A cell projection supported by an assembly of actin filaments."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "GO:0098858"; "Planarian_Anatomy"; rdfs:label "actin-based cell projection" . _:68ba7a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "A cell projection supported by an assembly of actin filaments."; "GO:0098858" . a owl:Class; ; rdfs:comment "inadvertently duplicated, going with ID that is best annotated"; rdfs:label "obsolete cilium"; owl:deprecated true . a owl:Class; rdfs:subClassOf ; "Thin cylindrical membrane-covered projections on the surface of an animal cell containing a core bundle of actin filaments."; ; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "GO:0005902"; "Planarian_Anatomy"; rdfs:label "microvillus" . _:68ba8a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Thin cylindrical membrane-covered projections on the surface of an animal cell containing a core bundle of actin filaments."; "GO:0005902" . _:68ba9a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget ; rdfs:comment "Image is an electron micrograph depicting a portion of the outer epithelium of the pharynx. Microvilli on the left hand of the image have been labeled with arrowheads. To the right of the microvilli are larger cilia. Note the difference in width and length. Scale bar is 2 um." . a owl:Class; rdfs:subClassOf ; "Extended zone of intimate apposition between two cells containing one or more types of intercellular junctions."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "GO:0044291"; "Planarian_Anatomy"; rdfs:label "cell-cell contact zone" . _:68baaa a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Extended zone of intimate apposition between two cells containing one or more types of intercellular junctions."; "GO:0044291" . a owl:Class; rdfs:subClassOf ; "A cellular component that forms a specialized region of connection between two or more cells or between a cell and the extracellular matrix. At a cell junction, anchoring proteins extend through the plasma membrane to link cytoskeletal proteins in one cell to cytoskeletal proteins in neighboring cells or to proteins in the extracellular matrix."; ; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "GO:0030054", "PMID:20511647", "PMID:21458439"; "Planarian_Anatomy"; rdfs:label "cell junction" . _:68baba a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "A cellular component that forms a specialized region of connection between two or more cells or between a cell and the extracellular matrix. At a cell junction, anchoring proteins extend through the plasma membrane to link cytoskeletal proteins in one cell to cytoskeletal proteins in neighboring cells or to proteins in the extracellular matrix."; "GO:0030054" . _:68baca a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget ; rdfs:comment "Image is an electron micrograph of two outer epidermal cells of the pharynx. There is an adherens junction (arrowheads) between two cells. Scale bar is 0.5 um." . a owl:Class; rdfs:subClassOf ; "A cell junction that forms a connection between two or more cells in a multicellular organism; this excludes direct cytoplasmic junctions such as ring canals."; ; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "GO:0005911"; "Planarian_Anatomy"; rdfs:label "cell-cell junction" . _:68bada a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "A cell junction that forms a connection between two or more cells in a multicellular organism; this excludes direct cytoplasmic junctions such as ring canals."; "GO:0005911" . _:68baea a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget ; rdfs:comment "Image is an electron micrograph of two outer epidermal cells of the pharynx. There is an adherens junction (arrowheads) between two cells. Scale bar is 0.5 um." . a owl:Class; rdfs:subClassOf ; "The attachment of one cell to another cell via adhesion molecules."; ; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "GO:0098609"; "Planarian_Anatomy"; rdfs:label "cell-cell adhesion" . _:68bafa a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "The attachment of one cell to another cell via adhesion molecules."; "GO:0098609" . _:68bb0a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget ; rdfs:comment "Image is an electron micrograph of two outer epidermal cells of the pharynx. There is an adherens junction (arrowheads) between two cells. Scale bar is 0.5 um." . a owl:Class; rdfs:subClassOf ; "Any constituent part of the living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "GO:0044424"; "Planarian_Anatomy"; rdfs:label "intracellular part" . _:68bb1a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Any constituent part of the living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm."; "GO:0044424" . a owl:Class; rdfs:subClassOf ; "All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures"; ; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "GO:0005737", "PMID:16890156", "PMID:28976975"; "Planarian_Anatomy"; rdfs:label "cytoplasm" . _:68bb2a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures"; "GO:0005737" . _:68bb3a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget ; rdfs:comment "Image is an electron micrograph depicting a portion of a cell. Outside of the nucleus (N), the arrowheads mark areas of cytoplasm, which appears as a mottled gray filling. Scale bar is 0.5um." . a owl:Class; rdfs:comment "term is not needed."; rdfs:label "obsolete acidophilic cytoplasm"; owl:deprecated true . a owl:Class; rdfs:comment "term is not needed."; rdfs:label "obsolete basophilic cytoplasm"; owl:deprecated true . a owl:Class; rdfs:subClassOf , _:68bb4a; "Any constituent part of the cytoplasm, all of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "GO:0044444"; "Planarian_Anatomy"; rdfs:label "cytoplasmic part" . _:68bb4a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68bb5a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Any constituent part of the cytoplasm, all of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures."; "GO:0044444" . a owl:Class; rdfs:subClassOf ; "Any constituent part of cytoplasmic vesicle, a vesicle formed of membrane or protein, found in the cytoplasm of a cell."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "GO:0044433"; "Planarian_Anatomy"; rdfs:label "cytoplasmic vesicle part" . _:68bb6a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Any constituent part of cytoplasmic vesicle, a vesicle formed of membrane or protein, found in the cytoplasm of a cell."; "GO:0044433" . a owl:Class; rdfs:subClassOf ; "A closed structure, found only in eukaryotic cells, that is completely surrounded by unit membrane and contains liquid material. Cells contain one or several vacuoles, that may have different functions from each other. Vacuoles have a diverse array of functions. They can act as a storage organelle for nutrients or waste products, as a degradative compartment, as a cost-effective way of increasing cell size, and as a homeostatic regulator controlling both turgor pressure and pH of the cytosol."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "GO:0005773"; "Planarian_Anatomy"; rdfs:label "vacuole" . _:68bb7a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "A closed structure, found only in eukaryotic cells, that is completely surrounded by unit membrane and contains liquid material. Cells contain one or several vacuoles, that may have different functions from each other. Vacuoles have a diverse array of functions. They can act as a storage organelle for nutrients or waste products, as a degradative compartment, as a cost-effective way of increasing cell size, and as a homeostatic regulator controlling both turgor pressure and pH of the cytosol."; "GO:0005773" . a owl:Class; rdfs:comment "term is not needed."; rdfs:label "obsolete cytoskeleton organization"; owl:deprecated true . a owl:Class; rdfs:subClassOf ; "Organized structure of distinctive morphology and function, occurring within the cell. Includes the nucleus, mitochondria, plastids, vacuoles, vesicles, ribosomes and the cytoskeleton. Excludes the plasma membrane."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "GO:0043229"; "Planarian_Anatomy"; rdfs:label "intracellular organelle" . _:68bb8a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Organized structure of distinctive morphology and function, occurring within the cell. Includes the nucleus, mitochondria, plastids, vacuoles, vesicles, ribosomes and the cytoskeleton. Excludes the plasma membrane."; "GO:0043229" . a owl:Class; rdfs:subClassOf , ; "Organized structure of distinctive morphology and function, not bounded by a lipid bilayer membrane and occurring within the cell. Includes ribosomes, the cytoskeleton and chromosomes"; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "GO:0043232"; "Planarian_Anatomy"; rdfs:label "intracellular non-membrane-bounded organelle" . _:68bb9a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Organized structure of distinctive morphology and function, not bounded by a lipid bilayer membrane and occurring within the cell. Includes ribosomes, the cytoskeleton and chromosomes"; "GO:0043232" . a owl:Class; rdfs:subClassOf ; "A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "GO:0016020"; "Planarian_Anatomy"; rdfs:label "membrane" . _:68bbaa a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it."; "GO:0016020" . a owl:Class; rdfs:subClassOf ; "Examples include the outer membranes of double membrane bound organelles such as mitochondria as well as the bounding membranes of single-membrane bound organelles such as lysosomes."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "GO:0098588"; "Planarian_Anatomy"; rdfs:label "bounding membrane of organelle" . _:68bbba a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Examples include the outer membranes of double membrane bound organelles such as mitochondria as well as the bounding membranes of single-membrane bound organelles such as lysosomes."; "GO:0098588" . a owl:Class; rdfs:subClassOf , _:68bbca; "Any constituent part of a membrane, a double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "GO:0044425"; "Planarian_Anatomy"; rdfs:label "membrane part" . _:68bbca a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68bbda a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Any constituent part of a membrane, a double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins."; "GO:0044425" . a owl:Class; rdfs:subClassOf , _:68bbea; "Any constituent part of the plasma membrane, the membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "GO:0044459"; "Planarian_Anatomy"; rdfs:label "plasma membrane part" . _:68bbea a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68bbfa a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Any constituent part of the plasma membrane, the membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins."; "GO:0044459" . a owl:Class; rdfs:subClassOf , _:68bc0a; "A membrane that is one of the two lipid bilayers of an organelle envelope or the outermost membrane of single membrane bound organelle."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "GO:0031090"; "Planarian_Anatomy"; rdfs:label "organelle membrane" . _:68bc0a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68bc1a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "A membrane that is one of the two lipid bilayers of an organelle envelope or the outermost membrane of single membrane bound organelle."; "GO:0031090" . a owl:Class; rdfs:subClassOf ; "Organized structure of distinctive morphology and function. Includes the nucleus, mitochondria, plastids, vacuoles, vesicles, ribosomes and the cytoskeleton, and prokaryotic structures such as anammoxosomes and pirellulosomes. Excludes the plasma membrane."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "GO:0043226"; "Planarian_Anatomy"; rdfs:label "organelle" . _:68bc2a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Organized structure of distinctive morphology and function. Includes the nucleus, mitochondria, plastids, vacuoles, vesicles, ribosomes and the cytoskeleton, and prokaryotic structures such as anammoxosomes and pirellulosomes. Excludes the plasma membrane."; "GO:0043226" . a owl:Class; rdfs:subClassOf ; "Organized structure of distinctive morphology and function, bounded by a single or double lipid bilayer membrane. Includes the nucleus, mitochondria, plastids, vacuoles, and vesicles. Excludes the plasma membrane."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "GO:0043227"; "Planarian_Anatomy"; rdfs:label "membrane-bounded organelle" . _:68bc3a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Organized structure of distinctive morphology and function, bounded by a single or double lipid bilayer membrane. Includes the nucleus, mitochondria, plastids, vacuoles, and vesicles. Excludes the plasma membrane."; "GO:0043227" . a owl:Class; rdfs:subClassOf , ; "Organized structure of distinctive morphology and function, bounded by a single or double lipid bilayer membrane and occurring within the cell. Includes the nucleus, mitochondria, plastids, vacuoles, and vesicles. Excludes the plasma membrane."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "GO:0043231"; "Planarian_Anatomy"; rdfs:label "intracellular membrane-bounded organelle" . _:68bc4a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Organized structure of distinctive morphology and function, bounded by a single or double lipid bilayer membrane and occurring within the cell. Includes the nucleus, mitochondria, plastids, vacuoles, and vesicles. Excludes the plasma membrane."; "GO:0043231" . a owl:Class; rdfs:subClassOf ; "A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions."; ; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "GO:0005794"; "Planarian_Anatomy"; rdfs:label "Golgi apparatus" . _:68bc5a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions."; "GO:0005794" . _:68bc6a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget ; rdfs:comment "Image is an electron micrograph showing golgi bodies (arrowheads). Many secretory vesicles can be seen, as well as rough endoplasmic reticulum on the right side of the micrograph. Scale bar is 0.2 um." . a owl:Class; rdfs:subClassOf ; "A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent."; ; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "GO:0005634", "ISBN:9780070316607", "PMID:23405188", "PMID:25404302", "PMID:26457503", "PMID:28976975", "PMID:29100657", "PMID:29357350"; "Planarian_Anatomy"; rdfs:label "nucleus" . _:68bc7a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent."; "GO:0005634" . _:68bc8a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget ; rdfs:comment "Image is an electron micrograph of several nuclei (N) close to and a part of the dorsal epidermis. Note how the epidermal cell nuclei appear more wrinkled and have stained differently than the cells lying beneath the basal lamina (BL). Scale bar is 2 um." . a owl:Class; rdfs:subClassOf ; "A cytoplasmic, membrane bound vesicle that is capable of fusing to the plasma membrane to release its contents into the extracellular space."; ; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "GO:0099503"; "Planarian_Anatomy"; rdfs:label "secretory vesicle" . _:68bc9a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "A cytoplasmic, membrane bound vesicle that is capable of fusing to the plasma membrane to release its contents into the extracellular space."; "GO:0099503" . _:68bcaa a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget ; rdfs:comment "Image is an electron micrograph depicting two golgi bodies and accompanying secratory vesicles. A few have been labeled with arrowheads. Scale bar is 200 nm." . a owl:Class; rdfs:subClassOf ; "Organized structure of distinctive morphology and function, not bounded by a lipid bilayer membrane. Includes ribosomes, the cytoskeleton and chromosomes."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "GO:0043228"; "Planarian_Anatomy"; rdfs:label "non-membrane-bounded organelle" . _:68bcba a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Organized structure of distinctive morphology and function, not bounded by a lipid bilayer membrane. Includes ribosomes, the cytoskeleton and chromosomes."; "GO:0043228" . a owl:Class; rdfs:subClassOf , _:68bcca; "Any constituent part of the nucleus, a membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "GO:0044428"; "Planarian_Anatomy"; rdfs:label "nuclear part" . _:68bcca a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68bcda a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Any constituent part of the nucleus, a membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated."; "GO:0044428" . a owl:Class; rdfs:subClassOf ; "A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome."; ; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "GO:0044428"; "Planarian_Anatomy"; rdfs:label "nucleolus" . _:68bcea a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome."; "GO:0044428" . _:68bcfa a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget ; rdfs:comment "Image is an electron micrograph depicting a nucleus. Inside, the nucleolus has been labeled with arrowheads. Scale bar is 1 um." . a owl:Class; rdfs:subClassOf ; "The ordered and organized complex of DNA, protein (histones), and sometimes RNA, that forms the chromosome."; ; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "GO:0000785"; "Planarian_Anatomy"; rdfs:label "chromatin" . _:68bd0a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "The ordered and organized complex of DNA, protein (histones), and sometimes RNA, that forms the chromosome."; "GO:0000785" . _:68bd1a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget ; rdfs:comment "Image is an electron micrograph showing a mitotic cell with condensed chromatin (arrowhead). Scale bar is 1um." . a owl:Class; rdfs:subClassOf ; "A compact and highly condensed form of chromatin."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "GO:0000792"; "Planarian_Anatomy"; rdfs:label "heterochromatin" . _:68bd2a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "A compact and highly condensed form of chromatin."; "GO:0000792" . a owl:Class; rdfs:subClassOf ; "A dispersed and relatively uncompacted form of chromatin."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "GO:0000791"; "Planarian_Anatomy"; rdfs:label "euchromatin" . _:68bd3a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "A dispersed and relatively uncompacted form of chromatin."; "GO:0000791" . a owl:Class; rdfs:subClassOf ; "An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins. [ https://www.worldcat.org/search?q=bn%3A0198506732 ]"; ; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "GO:0005840"; "Planarian_Anatomy"; rdfs:label "ribosome" . _:68bd4a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins. [ https://www.worldcat.org/search?q=bn%3A0198506732 ]"; "GO:0005840" . _:68bd5a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget ; rdfs:comment "Image is an electron micrograph depicting ribosomes (arrowheads) in two separate cells. They can be seen as small dots in the cytoplasm and associating with the rough endoplasmic reticulum in the cell in the bottom of the micrograph. Scale bar is 200 nm." . a owl:Class; rdfs:subClassOf ; "A group of axons linking two or more neuropils and having a common origin, termination"; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "PMID:22884275", "PMID:24950970", "PMID:28137894", "UBERON:0001018"; "axon bundle", "axon bundles", "axon tracts"; "Planarian_Anatomy"; rdfs:label "axon tract" . _:68bd6a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "A group of axons linking two or more neuropils and having a common origin, termination"; "UBERON:0001018" . a owl:Class; rdfs:subClassOf ; "A cell whose function is determined by its response to an electric signal."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "CL:0000393"; "Planarian_Anatomy"; rdfs:label "electrically responsive cell" . _:68bd7a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "A cell whose function is determined by its response to an electric signal."; "CL:0000393" . a owl:Class; rdfs:subClassOf ; "A cell that initiates an electrical signal and passes that signal to another cell."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "CL:0000404"; "Planarian_Anatomy"; rdfs:label "electrically signaling cell" . _:68bd8a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "A cell that initiates an electrical signal and passes that signal to another cell."; "CL:0000404" . a owl:Class; rdfs:subClassOf , _:68bd9a, _:68bdaa; "An enclosed, cable-like bundle of axons in the peripheral nervous system originating in a nerve root in the central nervous system (or a condensed nervous structure) connecting with peripheral structures."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "PMID:27612382", "PMID:27800171", "UBERON:0001021"; "nerve bundle", "nerves", "neural subtree", "peripheral nerve"; "Planarian_Anatomy"; rdfs:label "nerve" . _:68bd9a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68bdaa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68bdba a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "An enclosed, cable-like bundle of axons in the peripheral nervous system originating in a nerve root in the central nervous system (or a condensed nervous structure) connecting with peripheral structures."; "UBERON:0001021" . a owl:Class; rdfs:subClassOf , _:68bdca, _:68bdda; "A fasciculated bundle of neuron projections (GO:0043005), largely or completely lacking synapses."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "CARO:0001001", "UBERON:0000122"; "Planarian_Anatomy"; rdfs:label "neuron projection bundle" . _:68bdca a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68bdda a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68bdea a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "A fasciculated bundle of neuron projections (GO:0043005), largely or completely lacking synapses."; "CARO:0001001" . a owl:Class; rdfs:subClassOf , _:68bdfa, _:68be0a; "A neuron which conveys sensory information centrally from the periphery."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "CL:0000526", "FMA:87653"; "input neuron"; "Planarian_Anatomy"; rdfs:label "afferent neuron" . _:68bdfa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68be0a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68be1a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "A neuron which conveys sensory information centrally from the periphery."; "CL:0000526" . a owl:Class; rdfs:subClassOf , _:68be2a, _:68be3a, _:68be4a; "A type of interneuron that has two neurites, usually an axon and a dendrite, extending from opposite poles of an ovoid cell body."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "CL:0000103", "FMA:67282", "ISBN:9780070316607", "PMID:16033796", "PMID:18202849", "PMID:21458439", "PMID:22445864", "PMID:24173799", "PMID:25493551"; "bipolar nerve cell"; "Planarian_Anatomy"; rdfs:label "bipolar neuron" . _:68be2a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68be3a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68be4a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68be5a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "A type of interneuron that has two neurites, usually an axon and a dendrite, extending from opposite poles of an ovoid cell body."; "CL:0000103" . a owl:Class; rdfs:subClassOf , _:68be6a, _:68be7a; "A neuron that has an axon which crosses the midline."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "CL:0000678", "PMID:22339734"; "Planarian_Anatomy"; rdfs:label "commissural neuron" . _:68be6a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68be7a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68be8a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "A neuron that has an axon which crosses the midline."; "CL:0000678" . a owl:Class; rdfs:subClassOf , _:68be9a, _:68beaa; "A neuron which sends impulses peripherally to activate muscles or secretory cells."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "CL:0000527"; "output neuron"; "Planarian_Anatomy"; rdfs:label "efferent neuron" . _:68be9a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68beaa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68beba a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "A neuron which sends impulses peripherally to activate muscles or secretory cells."; "CL:0000527" . a owl:Class; rdfs:subClassOf , ; "A motor neuron that is capable of directly inducing muscle contraction."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "CL:0008014", "PMID:25356635"; "excitatory neuron"; "Planarian_Anatomy"; rdfs:comment "In vertebrates, all motor neurons are excitatory, but various types of inhibitory motor neurons exist in invertebrates."; rdfs:label "excitatory motor neuron" . _:68beca a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "A motor neuron that is capable of directly inducing muscle contraction."; "CL:0008014" . a owl:Class; rdfs:subClassOf , _:68beda, _:68beea; "Most generally any neuron which is not motor or sensory. Interneurons may also refer to neurons whose axons remain within a particular brain region as contrasted with projection neurons which have axons projecting to other brain regions."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "BTO:0003811", "CL:0000099", "FBbt:00005125", "FMA:67313", "WBbt:0005113"; "Planarian_Anatomy"; rdfs:label "interneuron" . _:68beda a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68beea a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68befa a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Most generally any neuron which is not motor or sensory. Interneurons may also refer to neurons whose axons remain within a particular brain region as contrasted with projection neurons which have axons projecting to other brain regions."; "CL:0000099" . a owl:Class; rdfs:subClassOf , ; "Any neuron having a sensory function; an afferent neuron conveying sensory impulses."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "BTO:0001037", "CL:0000101", "FBbt:00005124", "FMA:84649", "WBbt:0005759"; "Planarian_Anatomy"; rdfs:label "sensory neuron" . _:68bf0a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Any neuron having a sensory function; an afferent neuron conveying sensory impulses."; "CL:0000101" . a owl:Class; rdfs:subClassOf ; "An efferent neuron that passes from the central nervous system or a ganglion toward or to a muscle and conducts an impulse that causes or inhibits movement."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "BTO:0000312", "CL:0000100", "FMA:83617", "WBbt:0005409"; "motoneuron"; "Planarian_Anatomy"; rdfs:label "motor neuron" . _:68bf1a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "An efferent neuron that passes from the central nervous system or a ganglion toward or to a muscle and conducts an impulse that causes or inhibits movement."; "CL:0000100" . a owl:Class; rdfs:subClassOf , , _:68bf2a, _:68bf3a; "Neuronal cells which synthesize, store and release neurohormones."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "CL:0000381", "FBbt:00005130", "PMID:24173799"; "neurosecretory cell"; "Planarian_Anatomy"; rdfs:label "neurosecretory neuron" . _:68bf2a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68bf3a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68bf4a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Neuronal cells which synthesize, store and release neurohormones."; "CL:0000381" . a owl:Class; rdfs:subClassOf ; "Sympathetic neurons are part of the sympathetic nervous system and are primarily adrenergic producing the neurotransmitter noradrenalin along with other neuropeptides."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "CL:0011103"; "Planarian_Anatomy"; rdfs:label "sympathetic neuron" . _:68bf5a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Sympathetic neurons are part of the sympathetic nervous system and are primarily adrenergic producing the neurotransmitter noradrenalin along with other neuropeptides."; "CL:0011103" . a owl:Class; rdfs:subClassOf ; "Neuron with one neurite that extends from the cell body."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "CL:0000106", "FMA:67278", "ISBN:9780070316607", "PMID:18499291", "PMID:24173799"; "unipolar nerve cell"; "Planarian_Anatomy"; rdfs:label "unipolar neuron" . _:68bf6a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Neuron with one neurite that extends from the cell body."; "CL:0000106" . a owl:Class; rdfs:subClassOf , _:68bf7a, _:68bf8a; "Neuron with an axon and two or more dendrites."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "CL:0000104", "FMA:67287", "ISBN:9780070316607", "PMID:18499291"; "multipolar nerve cell"; "Planarian_Anatomy"; rdfs:label "multipolar neuron" . _:68bf7a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68bf8a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68bf9a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Neuron with an axon and two or more dendrites."; "CL:0000104" . a owl:Class; rdfs:subClassOf ; "Cells that are in close proximity to neurons."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "CL:0000130"; "Planarian_Anatomy"; rdfs:label "neuron associated cell (sensu Nematoda and Protostomia)" . _:68bfaa a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Cells that are in close proximity to neurons."; "CL:0000130" . a owl:Class; rdfs:subClassOf , _:68bfba; "Any neuron that is part of a central nervous system."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "CL:2000029"; "Planarian_Anatomy"; rdfs:label "central nervous system neuron" . _:68bfba a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68bfca a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Any neuron that is part of a central nervous system."; "CL:2000029" . a owl:Class; rdfs:subClassOf , _:68bfda, _:68bfea; "Any neuron that is part of a peripheral nervous system."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "CL:2000032", "PMID:23123964", "PMID:23954785", "PMID:25254346", "PMID:26711341", "PMID:29184198"; "peripheral neuron"; "Planarian_Anatomy"; rdfs:label "peripheral nervous system neuron" . _:68bfda a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68bfea a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68bffa a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Any neuron that is part of a peripheral nervous system."; "CL:2000032" . a owl:Class; rdfs:subClassOf ; "A neruon whose cell body is within an autonomic ganglion."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "CL:0000107", "FMA:80121"; "Planarian_Anatomy"; rdfs:label "autonomic neuron" . _:68c00a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "A neruon whose cell body is within an autonomic ganglion."; "CL:0000107" . a owl:Class; rdfs:subClassOf ; "A neruon contained within with the enteric nervous system (gastrodermal plexus)."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "CL:0007011"; "Planarian_Anatomy"; rdfs:label "enteric neuron" . _:68c01a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "A neruon contained within with the enteric nervous system (gastrodermal plexus)."; "CL:0007011" . a owl:Class; rdfs:subClassOf , _:68c02a, _:68c03a; "Acellular anatomical structure that consists of a thin sheet of fibrous proteins that underlie and support the cells of an epithelium. It separates the cells of an epithelium from any underlying tissue."; ; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "AAO:0010269", "AEO:0000065", "BILA:0000065", "C32186", "CARO:0000065", "EHDAA2:0003065" . _:68c02a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68c03a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . "FMA:62918", "HAO:0000065", "ISBN:9780070316607", "MESH:D001485", "NIF_Subcellular:sao1397492660", "PMID:18786419", "PMID:19048075", "PMID:21664348", "PMID:21828097", "PMID:22479207", "PMID:23079596", "PMID:23405188", "PMID:23903188", "PMID:25017721", "PMID:26057828", "PMID:26457503", "PMID:27551436", "PMID:29100657", "PMID:30383829", "PMID:30962434", "TAO:0001485", "TGMA:0001850", "UMLS:C0085872", "VHOG:0001592", "WBbt:0005756", "XAO:0003163", "ZFA:0001485"; "basal lamina", "basal lamina of epithelium", "basement membrane"; "Planarian_Anatomy"; rdfs:comment "this class represents a continuous sheet of basal lamina which can underlie multiple epithelial cells over large regions. In contrast, the GO class 'basal lamina' represents a portion of substance on the scale of a single cell."; rdfs:label "basal lamina of epidermis" . _:68c04a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Acellular anatomical structure that consists of a thin sheet of fibrous proteins that underlie and support the cells of an epithelium. It separates the cells of an epithelium from any underlying tissue."; "CARO:0000065" . _:68c05a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget ; rdfs:comment "Image is an electron micrograph showing the dorsal epidermis. Epidermal cells can be seen above (superfical to) the basal lamina (BL) and the body wall musculature can be seen below. Scale bar is 2um." . a owl:Class; rdfs:subClassOf , , _:68c06a, _:68c07a, _:68c08a, _:68c09a, _:68c0aa; "Rhabdites that are located basally to the epidermis, in the mesenchyme. In Smed these are present in cells likely on their way to becoming part of the mature epidermis."; ; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "ISBN:9780070316607"; "Planarian_Anatomy"; rdfs:comment "http://purl.obolibrary.org/obo/part_of 'dorsal epidermis progenitor cell' (PLANA_0003501), 'ventral epidermis progenitor cell' (PLANA:0003503)because EM data we can see immature adenal rhbadites in cells just underneath the basal lamina dorsally and ventrally."; rdfs:label "adenal rhabdite" . _:68c06a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68c07a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68c08a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68c09a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68c0aa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68c0ba a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Rhabdites that are located basally to the epidermis, in the mesenchyme. In Smed these are present in cells likely on their way to becoming part of the mature epidermis."; "ISBN:9780070316607" . _:68c0ca a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget ; rdfs:comment "Image is an electron micrograph showing the dorsal epidermis and underlying basal lamina at the top. Adenal rhabdites are marked with \"Rh\" and can be seen in cells underneath or medial to the basal lamina. Scale bar is 2um." . a owl:Class; rdfs:subClassOf , _:68c0da; "A cell junction at which anchoring proteins (cadherins or integrins) extend through the plasma membrane and are attached to actin filaments."; ; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "GO:0005912", "PMID:26556349"; "Planarian_Anatomy"; rdfs:label "adherens junction" . _:68c0da a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68c0ea a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "A cell junction at which anchoring proteins (cadherins or integrins) extend through the plasma membrane and are attached to actin filaments."; "GO:0005912" . _:68c0fa a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget ; rdfs:comment "Image is an electron micrograph of two outer epidermal cells of the pharynx. There is an adherens junction (arrowheads) between two cells. Scale bar is 0.5 um." . a owl:Class; rdfs:subClassOf , , _:68c10a, _:68c11a, _:68c12a, _:68c13a, _:68c14a, _:68c15a, _:68c16a; "Finger-like processes at the terminal pore of adhesive gland cells around the marginal adhesive zone. They protrude past the epidermis and are longer microvilli, and shorter than cilia."; ; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "ISBN:9780070316607"; "adhesive papillae"; "Planarian_Anatomy"; rdfs:label "adhesive papilla" . _:68c10a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68c11a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68c12a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68c13a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68c14a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68c15a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68c16a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68c17a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Finger-like processes at the terminal pore of adhesive gland cells around the marginal adhesive zone. They protrude past the epidermis and are longer microvilli, and shorter than cilia."; "ISBN:9780070316607" . _:68c18a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget ; rdfs:comment "Image is an electron micrograph of the outside of an animal at the marginal adhesive zone. The adhesive papilla (arrowheads) are colored in blue and surround each secretory pore (yellow). Mucus and cilia are both green. Scale bar is 2um." . a owl:Class; rdfs:subClassOf ; "A wound resulting in two or more separate tissue fragments."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "Planarian_Anatomy"; rdfs:label "amputation" . a owl:Class; rdfs:subClassOf , , _:68c19a, _:68c1aa, _:68c1ba, _:68c1ca, _:68c1da, _:68c1ea, _:68c1fa, _:68c20a; "A branch of the triclad gut located anterior to the pharynx."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "PMID:18063757", "PMID:18287199", "PMID:19174194", "PMID:20707997", "PMID:21458439", "PMID:21664348", "PMID:21806978", "PMID:22451003", "PMID:22479207", "PMID:23318635", "PMID:24063805", "PMID:28287248", "PMID:30194301"; "anterior branch", "anterior intestinal branch"; "Planarian_Anatomy"; rdfs:label "anterior gut branch" . _:68c19a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68c1aa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68c1ba a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68c1ca a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68c1da a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68c1ea a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68c1fa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68c20a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68c21a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "A branch of the triclad gut located anterior to the pharynx."; "PMID:21664348" . a owl:Class; rdfs:subClassOf , , _:68c22a, _:68c23a, _:68c24a, _:68c25a, _:68c26a; "The anterior-medial region of the head margin."; ; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "PMID:15866156", "PMID:18063755", "PMID:22479207", "PMID:24415944", "PMID:24992682", "PMID:27063937", "PMID:28126842", "PMID:28216315", "PMID:29547123", "PMID:30962434"; "head tip"; "Planarian_Anatomy"; rdfs:label "anterior tip" . _:68c22a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68c23a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68c24a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68c25a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68c26a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68c27a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "The anterior-medial region of the head margin."; "PMID:22479207" . _:68c28a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget ; rdfs:comment "Illustration of the anterior tip in green." . a owl:Class; rdfs:subClassOf ; "A chamber formation in an organ."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "ISBN:9780070316607", "NCIT:C97102"; "Planarian_Anatomy"; rdfs:label "antrum" . _:68c29a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "A chamber formation in an organ."; "ISBN:9780070316607" . a owl:Class; rdfs:subClassOf , , _:68c2aa, _:68c2ba, _:68c2ca, _:68c2da, _:68c2ea, _:68c2fa, _:68c30a, _:68c31a; "A sense organ located along the dorsolateral head margin. The auricular groove is highly innervtated by ciliated sensory neurons, and has an altered epidermis devoid of rhabdites and gland cells."; ; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "ISBN:9780070316607", "PMID:27800171", "PMID:28495872", "PMID:30399335", "PMID:30485821"; "Planarian_Anatomy"; rdfs:label "auricle" . _:68c2aa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68c2ba a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68c2ca a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68c2da a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68c2ea a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68c2fa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68c30a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68c31a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68c32a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "A sense organ located along the dorsolateral head margin. The auricular groove is highly innervtated by ciliated sensory neurons, and has an altered epidermis devoid of rhabdites and gland cells."; "ISBN:9780070316607" . _:68c33a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget ; rdfs:comment "Image is a scanning electron micrograph of the dorsal side of the head of an adult worm. The auricles (arrowheads) appear as a short groove on each side of the head. Anteror is down and scale bar is 100um." . a owl:Class; rdfs:subClassOf , _:68c34a; "The long process of a neuron that conducts nerve impulses, usually away from the cell body to the terminals and varicosities, which are sites of storage and release of neurotransmitter."; ; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "GO:0030424", "PMID:16033796", "PMID:17251262", "PMID:17553481", "PMID:18202849", "PMID:20707997", "PMID:21566185", "PMID:22445864", "PMID:23318641", "PMID:23903188", "PMID:25254346", "PMID:25356635", "PMID:25493551", "PMID:25772472", "PMID:27800171", "PMID:28495872"; "nerve fiber"; "Planarian_Anatomy"; rdfs:label "axon" . _:68c34a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68c35a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "The long process of a neuron that conducts nerve impulses, usually away from the cell body to the terminals and varicosities, which are sites of storage and release of neurotransmitter."; "GO:0030424" . _:68c36a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget ; rdfs:comment "Image is an electron micrograph showing a cross section of an axon (arrowheads), right underneath or medial to the dorsal body wall musculature. Dorsal is up and the scale bar is 2um." . a owl:Class; rdfs:subClassOf , , _:68c37a, _:68c38a; "The bundle of microtubules and associated proteins that forms the core of cilia (also called flagella) in eukaryotic cells and is responsible for their movements."; ; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "GO:0005930", "PMID:23144623", "PMID:26057828", "PMID:26912790"; "Planarian_Anatomy"; rdfs:label "axoneme" . _:68c37a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68c38a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68c39a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "The bundle of microtubules and associated proteins that forms the core of cilia (also called flagella) in eukaryotic cells and is responsible for their movements."; "GO:0005930" . _:68c3aa a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget ; rdfs:comment "Image is an electron micrograph of several cilia where a cross-section reveals the axoneme with a 9+2 arrangement of microtubles. Arrowheads denote microtubules. Scale bar is 100nm." . a owl:Class; rdfs:subClassOf , , _:68c3ba, _:68c3ca; "A membrane-tethered, short cylindrical array of microtubules and associated proteins found at the base of a eukaryotic cilium (also called flagellum) that is similar in structure to a centriole and derives from it. The cilium basal body is the site of assembly and remodelling of the cilium and serves as a nucleation site for axoneme growth. As well as anchoring the cilium, it is thought to provide a selective gateway regulating the entry of ciliary proteins and vesicles by intraflagellar transport."; ; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "GO:0036064", "ISBN:9780070316607", "PMID:21282632", "PMID:21828097", "PMID:21937596"; "Planarian_Anatomy"; rdfs:label "basal body" . _:68c3ba a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68c3ca a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68c3da a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "A membrane-tethered, short cylindrical array of microtubules and associated proteins found at the base of a eukaryotic cilium (also called flagellum) that is similar in structure to a centriole and derives from it. The cilium basal body is the site of assembly and remodelling of the cilium and serves as a nucleation site for axoneme growth. As well as anchoring the cilium, it is thought to provide a selective gateway regulating the entry of ciliary proteins and vesicles by intraflagellar transport."; "GO:0036064" . _:68c3ea a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget ; rdfs:comment "Image is an electron micrograph showing a cross-section of a cilium, revealing the basal body (arrowhead). Scale bar is 0.5um." . a owl:Class; rdfs:subClassOf , , _:68c3fa, _:68c40a, _:68c41a, _:68c42a, _:68c43a, _:68c44a, _:68c45a, _:68c46a; "Region of the cephalic ganglia innervated by the optic nerve (posterior-projecting photoreceptor neuron fasiculated axons)."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "PMID:16033796", "PMID:26618653"; "visual center"; "Planarian_Anatomy"; rdfs:label "brain visual center" . _:68c3fa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68c40a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68c41a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68c42a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68c43a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68c44a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68c45a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68c46a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68c47a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Region of the cephalic ganglia innervated by the optic nerve (posterior-projecting photoreceptor neuron fasiculated axons)."; "PMID:16033796" . a owl:Class; rdfs:subClassOf , , _:68c48a, _:68c49a, _:68c4aa; "An enlarged portion of the seminal vesicle, comprised of secretory epithelial cells, that connects to the ejaculatory duct within the penis papilla."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "ISBN:9780070316607", "https://doi.org/10.1101/279364"; "bulbar lumen"; "Planarian_Anatomy"; rdfs:label "bulbar cavity" . _:68c48a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68c49a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68c4aa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68c4ba a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "An enlarged portion of the seminal vesicle, comprised of secretory epithelial cells, that connects to the ejaculatory duct within the penis papilla."; "ISBN:9780070316607" . a owl:Class; rdfs:subClassOf , , , _:68c4ca, _:68c4da, _:68c4ea, _:68c4fa, _:68c50a, _:68c51a, _:68c52a, _:68c53a, _:68c54a, _:68c55a, _:68c56a, _:68c57a; "Irradiation-sensitive, mesenchymal cells that are absent from the head region anterior to the eyes and the pharynx. The Category 1 designation encompasses the neoblast population."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "PMID:18786419", "PMID:21894189", "PMID:22439894"; "Category 1 gene expressing cell"; "Planarian_Anatomy"; rdfs:label "Category 1 cell" . _:68c4ca a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68c4da a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68c4ea a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68c4fa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68c50a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68c51a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68c52a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68c53a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68c54a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68c55a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68c56a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68c57a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68c58a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Irradiation-sensitive, mesenchymal cells that are absent from the head region anterior to the eyes and the pharynx. The Category 1 designation encompasses the neoblast population."; "PMID:18786419" . a owl:Class; rdfs:subClassOf ; "The portion of a cell bearing surface projections such as axons, dendrites, cilia, or flagella that includes the nucleus, but excludes all cell projections."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "GO:0044297", "PMID:15866156", "PMID:16033796", "PMID:20865784", "PMID:27612384", "PMID:28495872"; "Planarian_Anatomy"; rdfs:label "cell body" . _:68c59a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "The portion of a cell bearing surface projections such as axons, dendrites, cilia, or flagella that includes the nucleus, but excludes all cell projections."; "GO:0044297" . a owl:Class; rdfs:subClassOf , , _:68c5aa, _:68c5ba, _:68c5ca, _:68c5da, _:68c5ea, _:68c5fa, _:68c60a, _:68c61a, _:68c62a, _:68c63a, _:68c64a, _:68c65a; "One of two bilaterally symmetric structures comprising the planarian brain."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "ISBN:9780070316607", "PMID:15866156", "PMID:16033796", "PMID:16890156", "PMID:17251262", "PMID:17553481", "PMID:17670787", "PMID:17905225", "PMID:17999079", "PMID:18063757", "PMID:18202849", "PMID:18287199", "PMID:19211673", "PMID:19247960", "PMID:19766622", "PMID:19852954", "PMID:20223763", "PMID:20422023", "PMID:20707997", "PMID:20967238", "PMID:21179478", "PMID:21282632", "PMID:21566185", "PMID:21806978", "PMID:21828097", "PMID:21852957", "PMID:22074376", "PMID:22125640", "PMID:22318224", "PMID:22371573", "PMID:22427692", "PMID:22439894", "PMID:22445864", "PMID:22451003", "PMID:22479207", "PMID:22884275", "PMID:23123964", "PMID:23250205", "PMID:23297191", "PMID:23318635", "PMID:23652002", "PMID:23903188", "PMID:24040508", "PMID:24063805", "PMID:24120894", "PMID:24131630", "PMID:24173799", "PMID:24238224", "PMID:24523458", "PMID:24704339", "PMID:24950970", "PMID:24992682", "PMID:25017721", "PMID:25254346", "PMID:25356635", "PMID:25493551", "PMID:25558068", "PMID:25772472", "PMID:26062938", "PMID:26114597", "PMID:26457503", "PMID:26525673", "PMID:26556349", "PMID:26618653", "PMID:27013241", "PMID:27034770", "PMID:27063937", "PMID:27074666", "PMID:27149082", "PMID:27150006", "PMID:27163480", "PMID:27523733", "PMID:27606067", "PMID:27612382", "PMID:27612384", "PMID:27800171", "PMID:27864883", "PMID:28126842", "PMID:28137894", "PMID:28171748", "PMID:28245923", "PMID:28287248", "PMID:28434803", "PMID:28686611", "PMID:28807897", "PMID:28893948", "PMID:29100657", "PMID:29158443", "PMID:29291974", "PMID:29291981", "PMID:29357350", "PMID:29547123", "PMID:29557542", "PMID:29674431", "PMID:29674432", "PMID:30143032", "PMID:30194301", "PMID:30282036", "PMID:30383829", "PMID:30399335", "PMID:30485821", "PMID:30729158"; "bi-lobed brain", "bi-lobed cephalic ganglia", "brain ganglia", "brain lobe"; "Planarian_Anatomy"; rdfs:label "cephalic ganglia lobe" . _:68c5aa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68c5ba a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68c5ca a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68c5da a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68c5ea a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68c5fa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68c60a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68c61a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68c62a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68c63a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68c64a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68c65a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68c66a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "One of two bilaterally symmetric structures comprising the planarian brain."; "PMID:17999079" . a owl:Class; rdfs:subClassOf , , _:68c67a, _:68c68a, _:68c69a, _:68c6aa; "A central nervous system neuron located within the planarian brain."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "PMID:17999079", "PMID:24173799", "PMID:27612382"; "brain neuron"; "Planarian_Anatomy"; rdfs:label "cephalic ganglia neuron" . _:68c67a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68c68a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68c69a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68c6aa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68c6ba a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "A central nervous system neuron located within the planarian brain."; "PMID:17999079" . a owl:Class; rdfs:subClassOf ; "Amputation carried out by application of chemicals."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "PMID:24737865"; "Planarian_Anatomy"; rdfs:label "chemical amputation" . _:68c6ca a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Amputation carried out by application of chemicals."; "PMID:24737865" . a owl:Class; rdfs:subClassOf ; "Amputation of the phaynx, including the esophagus, by treatment with Sodium Azide."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "PMID:24737865"; "chemical pharyngeal amputation"; "Planarian_Anatomy"; rdfs:label "chemical pharynx amputation" . _:68c6da a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Amputation of the phaynx, including the esophagus, by treatment with Sodium Azide."; "PMID:24737865" . a owl:Class; rdfs:subClassOf , _:68c6ea; "Any neuron that capable of some detection of chemical stimulus involved in sensory perception."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "FBbt:00005922", "PMID:18202849", "PMID:26525673", "PMID:27612382", "PMID:28126842", "PMID:28686611", "PMID:29547123"; "chemoreceptive neuron", "chemoreceptor neuron"; "Planarian_Anatomy"; rdfs:label "chemosensory neuron" . _:68c6ea a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68c6fa a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Any neuron that capable of some detection of chemical stimulus involved in sensory perception."; "FBbt:00005922" . a owl:Class; rdfs:subClassOf ; "A membrane-less, cytoplasmic ribonucleoprotein granule present in neoblasts and germ cells implicated in post-transcriptional regulation. The RNA helicase DHH1/RCK, Tudor, SmB, methylated substrates of PRMT5, PIWI-3 and Germinal Histone H4 localize to chromatoid bodies in neoblasts."; ; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "GO:0033391", "PMID:19247960", "PMID:20215344", "PMID:21356107", "PMID:22318224", "PMID:22385657", "PMID:22439894", "PMID:22543868", "PMID:24120894", "PMID:24367277", "PMID:24903754", "PMID:25017721", "PMID:27523733"; "nuage"; "Planarian_Anatomy"; rdfs:label "chromatoid body" . _:68c70a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "A membrane-less, cytoplasmic ribonucleoprotein granule present in neoblasts and germ cells implicated in post-transcriptional regulation. The RNA helicase DHH1/RCK, Tudor, SmB, methylated substrates of PRMT5, PIWI-3 and Germinal Histone H4 localize to chromatoid bodies in neoblasts."; "PMID:22318224", "PMID:24903754" . _:68c71a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget ; rdfs:comment "Image is an electron micrograph showing a chromatoid body (arrowhead) next to the cell's nucleus (N) which takes up the bottom left corner. Scale bar is 200nm." . a owl:Class; rdfs:subClassOf , ; "A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information."; ; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "GO:0005694", "PMID:25404302", "PMID:28757112", "PMID:28812561", "PMID:29364871", "PMID:30143032"; "Planarian_Anatomy"; rdfs:label "chromosome" . _:68c72a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information."; "GO:0005694" . _:68c73a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget ; rdfs:comment "Image is an electron micrograph showing a mitotic cell. An arrowhead marks the long arm of a chromosome. Scale bar is 1um." . a owl:Class; rdfs:subClassOf ; "Under the microscope chromosomes appear as thin, thread-like structures. They all have a short arm and long arm separated by a primary constriction called the centromere. The short arm is designated as p and the long arm as q."; ; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "NCIT:C13355", "PMID:25404302", "SO:0000105"; "Planarian_Anatomy"; rdfs:label "chromosome arm" . _:68c74a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Under the microscope chromosomes appear as thin, thread-like structures. They all have a short arm and long arm separated by a primary constriction called the centromere. The short arm is designated as p and the long arm as q."; "NCIT:C13355" . _:68c75a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget ; rdfs:comment "Image is an electron micrograph showing a mitotic cell. An arrowhead marks the long arm of a chromosome. Scale bar is 1um." . a owl:Class; rdfs:subClassOf ; "Epithelium bearing vibratile cilia on the free surface."; ; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "PMID:26457503", "PMID:26711341", "PMID:28216315", "PMID:28292427", "UBERON:0007601"; "Planarian_Anatomy"; rdfs:label "ciliated epithelium" . _:68c76a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Epithelium bearing vibratile cilia on the free surface."; "UBERON:0007601" . _:68c77a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget ; rdfs:comment "Image is an electron micrograph of an outer epidermal cell of the pharynx. These cells are heavily ciliated. Scale bar is 2um." . a owl:Class; rdfs:subClassOf , _:68c78a; "A specialized eukaryotic organelle that consists of a filiform extrusion of the cell surface and of some cytoplasmic parts. Each cilium is largely bounded by an extrusion of the cytoplasmic (plasma) membrane, and contains a regular longitudinal array of microtubules, anchored to a basal body. The longitudinal array of microtubules are almost always in a 9+2 array with 2 microtubles in the central cilia bundle and 9 sets of doublet microtubules around the perimeter. The exception to this arrangement is spermatazoa flagella, which have a 9+1 array in planarians."; ; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "GO:0005929"; "Planarian_Anatomy"; rdfs:label "cilium" . _:68c78a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68c79a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "A specialized eukaryotic organelle that consists of a filiform extrusion of the cell surface and of some cytoplasmic parts. Each cilium is largely bounded by an extrusion of the cytoplasmic (plasma) membrane, and contains a regular longitudinal array of microtubules, anchored to a basal body. The longitudinal array of microtubules are almost always in a 9+2 array with 2 microtubles in the central cilia bundle and 9 sets of doublet microtubules around the perimeter. The exception to this arrangement is spermatazoa flagella, which have a 9+1 array in planarians."; "GO:0005929" . _:68c7aa a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget ; rdfs:comment "Image is an electron micrograph depicting several cilia (arrowheads) emerging from a ventral epidermis cell. Scale bar is 0.5um." . a owl:Class; rdfs:subClassOf , _:68c7ba; "A bundle of nerve fibers crossing from one side to the other side of the brain or spinal cord."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "NCIT:C32349"; "Planarian_Anatomy"; rdfs:label "commissure" . _:68c7ba a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68c7ca a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "A bundle of nerve fibers crossing from one side to the other side of the brain or spinal cord."; "NCIT:C32349" . a owl:Class; rdfs:subClassOf ; "A wound or cleft resulted from tissue separation into parts or laid open or penetrated with a sharp edge or instrument."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "NCIT:C50518"; "Planarian_Anatomy"; rdfs:label "cut" . _:68c7da a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "A wound or cleft resulted from tissue separation into parts or laid open or penetrated with a sharp edge or instrument."; "NCIT:C50518" . a owl:Class; rdfs:subClassOf , _:68c7ea; "A neuron projection that has a short, tapering, morphology. Dendrites receive and integrate signals from other neurons or from sensory stimuli, and conduct nerve impulses towards the axon or the cell body. In most neurons, the impulse is conveyed from dendrites to axon via the cell body, but in some types of unipolar neuron, the impulse does not travel via the cell body."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "GO:0030425", "PMID:16033796", "PMID:17553481", "PMID:22445864", "PMID:25493551", "PMID:28495872" . _:68c7ea a owl:Restriction; owl:onProperty ; owl:someValuesFrom . "cell dendrite", "dendritic process", "dendritic projection"; "Planarian_Anatomy"; rdfs:label "dendrite" . _:68c7fa a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "A neuron projection that has a short, tapering, morphology. Dendrites receive and integrate signals from other neurons or from sensory stimuli, and conduct nerve impulses towards the axon or the cell body. In most neurons, the impulse is conveyed from dendrites to axon via the cell body, but in some types of unipolar neuron, the impulse does not travel via the cell body."; "GO:0030425" . a owl:Class; rdfs:subClassOf , , _:68c80a, _:68c81a, _:68c82a, _:68c83a, _:68c84a, _:68c85a, _:68c86a, _:68c87a, _:68c88a, _:68c89a, _:68c8aa, _:68c8ba, _:68c8ca; "A muscle cell that runs in the transverse plane that connects the dorsal and ventral sides of the animal."; ; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "PMID:30471994", "PMID:30962434"; "DVM", "dorsal-ventral muscle", "dorsal-ventral muscle fibers", "dorsoventral muscle", "dorsoventralmuscle fibers"; "Planarian_Anatomy"; rdfs:label "dorsal-ventral muscle cell" . _:68c80a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68c81a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68c82a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68c83a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68c84a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68c85a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68c86a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68c87a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68c88a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68c89a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68c8aa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68c8ba a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68c8ca a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68c8da a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "A muscle cell that runs in the transverse plane that connects the dorsal and ventral sides of the animal."; "PMID:30962434" . _:68c8ea a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget ; rdfs:comment "Image is an electron micrograph depicting multiple dorsal-ventral muscle cells (arrowheads). The ventral epidermis is at the bottom of this image. Scale bar is 10um." . a owl:Class; rdfs:subClassOf , , _:68c8fa, _:68c90a, _:68c91a, _:68c92a, _:68c93a, _:68c94a, _:68c95a; "A premeiotic female germ cell (i.e., a diploid female germline stem cell or transit amplifying oogonial cell)."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "Planarian_Anatomy"; rdfs:label "early female germ cell" . _:68c8fa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68c90a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68c91a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68c92a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68c93a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68c94a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68c95a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , , _:68c96a, _:68c97a, _:68c98a, _:68c99a, _:68c9aa, _:68c9ba, _:68c9ca, _:68c9da, _:68c9ea, _:68c9fa, _:68ca0a; "A premeiotic male germ cell (i.e., a spermatogonial stem cell or transit amplifying spermatogonial cell)."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "PMID:27330085"; "Planarian_Anatomy"; rdfs:label "early male germ cell" . _:68c96a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68c97a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68c98a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68c99a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68c9aa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68c9ba a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68c9ca a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68c9da a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68c9ea a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68c9fa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68ca0a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68ca1a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "A premeiotic male germ cell (i.e., a spermatogonial stem cell or transit amplifying spermatogonial cell)."; "PMID:27330085" . a owl:Class; rdfs:subClassOf , , _:68ca2a, _:68ca3a, _:68ca4a, _:68ca5a, _:68ca6a, _:68ca7a, _:68ca8a, _:68ca9a; "A cryptic digestive cavity comprised of phagocytic embryonic gut cells."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "PMID:28072387"; "Planarian_Anatomy"; rdfs:label "embryonic gut" . _:68ca2a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68ca3a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68ca4a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68ca5a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68ca6a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68ca7a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68ca8a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68ca9a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68caaa a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "A cryptic digestive cavity comprised of phagocytic embryonic gut cells."; "PMID:28072387" . a owl:Class; rdfs:subClassOf ; "An epithelial cell of the integument (the outer layer of an organism)."; ; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "CL:0000362", "PMID:21458439", "PMID:24922054", "PMID:25017721", "PMID:26457503", "PMID:28292427", "PMID:28686611", "PMID:28807897", "PMID:29100657", "PMID:29357350", "PMID:30399335"; "Planarian_Anatomy"; rdfs:label "epidermal cell" . _:68caba a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "An epithelial cell of the integument (the outer layer of an organism)."; "CL:0000362" . _:68caca a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget ; rdfs:comment "Image is an electron micrograph depicting the dorsal epidermis. A single cell has been labeled with arrowheads. Immediately deep to the epidermis is the basal lamina, labeled with \"BL.\" Scale bar is 2um." . a owl:Class; rdfs:subClassOf , , _:68cada, _:68caea, _:68cafa, _:68cb0a, _:68cb1a; "Rhabdites located within epidermal cells."; ; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "ISBN:9780070316607"; "Planarian_Anatomy"; rdfs:comment "http://purl.obolibrary.org/obo/part of 'dorsal epidermal cell' (PLANA_0003105) and 'ventral epidermal cell' (PLANA:0003101) added because we see rhabdites in both in EM data"; rdfs:label "epidermal rhabdite" . _:68cada a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68caea a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68cafa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68cb0a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68cb1a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68cb2a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Rhabdites located within epidermal cells."; "ISBN:9780070316607" . _:68cb3a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget ; rdfs:comment "Image is an electron micrograph depicting the epidermis. Rhabdites (arrowheads) can be seen in various stages of expansion inside of the epidermal cells. Scale bar is 5 um." . a owl:Class; rdfs:subClassOf , _:68cb4a; "The lipid bilayer surrounding the endoplasmic reticulum."; ; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "GO:0005789"; "Planarian_Anatomy"; rdfs:label "ER membrane" . _:68cb4a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68cb5a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "The lipid bilayer surrounding the endoplasmic reticulum."; "GO:0005789" . _:68cb6a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget ; rdfs:comment "Image is an electron micrograph depicting (rough) endoplasmic reticulum adjacent tp the nucleus (N). The arrowheads mark the ER membrane. Note the ribosomes (small dots) that can be seen both in the cytoplasm and lining the ER membrane. Scale bar is 0.2um." . a owl:Class; rdfs:subClassOf , , _:68cb7a, _:68cb8a, _:68cb9a, _:68cbaa, _:68cbba, _:68cbca, _:68cbda; "The black pigment that gives non-neuronal pigment cells of the optic cup their characteristic color."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "CHEBI:24009", "PMID:25356635", "PMID:26017970", "PMID:27240733"; "eye cell pigment", "eye pigment"; "Planarian_Anatomy"; rdfs:label "eumelanin" . _:68cb7a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68cb8a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68cb9a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68cbaa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68cbba a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68cbca a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68cbda a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68cbea a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "The black pigment that gives non-neuronal pigment cells of the optic cup their characteristic color."; "PMID:15760337", "PMID:26017970", "PMID:8812261" . a owl:Class; rdfs:subClassOf , _:68cbfa; "A cell involved in the elimination of metabolic and foreign toxins, and in maintaining the ionic, acid-base and water balance of biological fluids."; ; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "CL:0000424", "PMID:21566185", "PMID:24173799"; "Planarian_Anatomy"; rdfs:label "excretory cell" . _:68cbfa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68cc0a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "A cell involved in the elimination of metabolic and foreign toxins, and in maintaining the ionic, acid-base and water balance of biological fluids."; "CL:0000424" . _:68cc1a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget ; rdfs:comment "Image is an electron micrograph showing a cell that is part of the collecting duct. An arrowhead marks the nucleus of this cell. Note the visible lumen of the collecting duct extending out and passing through the basal lamina. This cell is involved in excretion. Scale bar is 2 um." . a owl:Class; rdfs:subClassOf , , _:68cc2a, _:68cc3a, _:68cc4a; "A structure lying external to one or more cells, which provides structural support, biochemical or biomechanical cues for cells or tissues."; ; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "GO:0031012", "PMID:19048075", "PMID:28126842", "PMID:28137894", "PMID:28807897", "PMID:30962434"; "ECM"; "Planarian_Anatomy"; rdfs:label "extracellular matrix" . _:68cc2a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68cc3a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68cc4a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68cc5a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "A structure lying external to one or more cells, which provides structural support, biochemical or biomechanical cues for cells or tissues."; "GO:0031012" . _:68cc6a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget ; rdfs:comment "Image is an electron micrograph showing the extracellular matrix (arrowheads) between two cells. Scale bar is 0.2um." . a owl:Class; rdfs:subClassOf ; "That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "GO:0005615", "PMID:21828097"; "Planarian_Anatomy"; rdfs:label "extracellular space" . _:68cc7a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid."; "GO:0005615" . a owl:Class; rdfs:subClassOf ; "A form of asexual reproduction resulting in self-amputation of posterior tissue, generating an anterior fragment and a fission fragment."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "Planarian_Anatomy"; rdfs:label "fission" . a owl:Class; rdfs:subClassOf , , _:68cc8a; "Planarian undulipodia consisting of spermatazoa cell posterior protrusions. Planarian spermatozoa contain two flagella and are composed of 9 + 1 axonemal microtubule arrangements in their flagella (markedly different from the 9 + 2 structures generally observed in sperm of other animals)."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "PMID:29095551", "PMID:4190073"; "Planarian_Anatomy"; rdfs:label "flagellum" . _:68cc8a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68cc9a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Planarian undulipodia consisting of spermatazoa cell posterior protrusions. Planarian spermatozoa contain two flagella and are composed of 9 + 1 axonemal microtubule arrangements in their flagella (markedly different from the 9 + 2 structures generally observed in sperm of other animals)."; "PMID:4190073" . a owl:Class; rdfs:subClassOf ; "A cell-cell junction composed of pannexins or innexins and connexins, two different families of channel-forming proteins."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "GO:0005921", "PMID:17670787", "PMID:22125640"; "Planarian_Anatomy"; rdfs:label "gap junction" . _:68ccaa a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "A cell-cell junction composed of pannexins or innexins and connexins, two different families of channel-forming proteins."; "GO:0005921" . a owl:Class; rdfs:subClassOf , , _:68ccba, _:68ccca, _:68ccda, _:68ccea; "A chamber where egg capsules are formed. One or more zygotes and yolk cells produced by the vitelline glands collect in the genital atrium; glands surrounding the genital atrium produce the egg capsule shell."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "PMID: 22074376"; "atrium", "female antrum"; "Planarian_Anatomy"; rdfs:label "genital atrium" . _:68ccba a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68ccca a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68ccda a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68ccea a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68ccfa a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "A chamber where egg capsules are formed. One or more zygotes and yolk cells produced by the vitelline glands collect in the genital atrium; glands surrounding the genital atrium produce the egg capsule shell."; "PMID:22074376" . a owl:Class; rdfs:subClassOf , , _:68cd0a, _:68cd1a; "A clonally-related group of interconnected spermatogonial or oogonial cells, enveloped by somatic gonadal cells."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "PMID:17376870", "PMID:22318224"; "germ cell cluster"; "Planarian_Anatomy"; rdfs:label "germ cell cyst" . _:68cd0a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68cd1a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68cd2a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "A clonally-related group of interconnected spermatogonial or oogonial cells, enveloped by somatic gonadal cells."; "PMID:17376870" . a owl:Class; rdfs:subClassOf , , _:68cd3a, _:68cd4a, _:68cd5a, _:68cd6a, _:68cd7a; "Stem cell that is the precursor of gametes."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "CL:0000014", "FBbt:00004861", "PMID:16344473", "PMID:17376870", "PMID:17390146", "PMID:18456843", "PMID:19247960", "PMID:20215344", "PMID:20844018", "PMID:22074376", "PMID:22252538", "PMID:22318224", "PMID:22385657", "PMID:22543868", "PMID:23652002", "PMID:24173799", "PMID:24367277", "PMID:25278423", "PMID:27013241", "PMID:28434803", "PMID:28812561", "https://doi.org/10.1101/279364"; "germ cell", "germ stem cell", "germline cell"; "Planarian_Anatomy"; rdfs:label "germline stem cell" . _:68cd3a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68cd4a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68cd5a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68cd6a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68cd7a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68cd8a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Stem cell that is the precursor of gametes."; "FBbt:00004861" . a owl:Class; rdfs:subClassOf ; "Cytoplasmic bead-like structures of animal cells, visible by electron microscope. Each granule is a functional unit with the biosynthesis and catabolism of glycogen being catalyzed by enzymes bound to the granule surface."; ; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "GO:0042587", "PMID:30608231"; "Planarian_Anatomy"; rdfs:label "glycogen granule" . _:68cd9a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Cytoplasmic bead-like structures of animal cells, visible by electron microscope. Each granule is a functional unit with the biosynthesis and catabolism of glycogen being catalyzed by enzymes bound to the granule surface."; "GO:0042587" . _:68cdaa a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget ; rdfs:comment "Image is an electron micrograph depicting glycogen granules (arrowheads) within the cytoplasm of a cell. Scale bar is 200 nm." . a owl:Class; rdfs:subClassOf ; "A surgical cut that breaches the epidermis, made with a defined edge."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "Planarian_Anatomy"; rdfs:label "incision" . a owl:Class; rdfs:subClassOf , , , _:68cdba, _:68cdca, _:68cdda, _:68cdea, _:68cdfa, _:68ce0a; "Epithelial cells lining the inside of the pharynx. In Smed, distally located cells are heavily ciliated."; ; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "ISBN:9780070316607", "PMID:20511647"; "inner pharynx epidermal cell"; "Planarian_Anatomy"; rdfs:label "pharynx inner epidermal cell" . _:68cdba a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68cdca a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68cdda a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68cdea a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68cdfa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68ce0a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68ce1a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Epithelial cells lining the inside of the pharynx. In Smed, distally located cells are heavily ciliated."; "ISBN:9780070316607" . _:68ce2a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget ; rdfs:comment "Image is an electron micrograph of a transverse section through the pharynx. The phayrnx lumen is to the bottom left. An epidermal cell, a part of the inner epithelial layer, has been marked with arrowheads. Immediately deep to the inner epithelial layer of the pharynx is musculature that has been colored. Magenta = circular; blue = longitudinal; yellow = radial. Scale bar is 5 um." . a owl:Class; rdfs:subClassOf , , _:68ce3a, _:68ce4a, _:68ce5a, _:68ce6a, _:68ce7a, _:68ce8a, _:68ce9a; "Gland or secretory cells sandwiched between muscle and epidermal layers in the pharynx."; ; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "ISBN:9780070316607"; "Planarian_Anatomy"; rdfs:label "inner zone of gland cells" . _:68ce3a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68ce4a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68ce5a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68ce6a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68ce7a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68ce8a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68ce9a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68ceaa a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Gland or secretory cells sandwiched between muscle and epidermal layers in the pharynx."; "ISBN:9780070316607" . _:68ceba a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget ; rdfs:comment "Image is an electron micrograph depicting a transverse section through the pharynx. Arrowheads label the inner zone of gland cells. They can be identified by the mucus granules the cell body is filled with. Scale bar is 5um." . a owl:Class; rdfs:subClassOf ; "A cell junction that forms a connection between two or more cells in a multicellular organism."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "GO:0005911"; "Planarian_Anatomy"; rdfs:label "intercellular junction" . _:68ceca a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "A cell junction that forms a connection between two or more cells in a multicellular organism."; "GO:0005911" . a owl:Class; rdfs:subClassOf ; "An amputation performed with a transverse, oblique or longitudinal cut."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "Planarian_Anatomy"; rdfs:label "linear amputation" . a owl:Class; rdfs:subClassOf ; "A breach of the epidermis and optionally down into other structures though an insult with a knife or other instrument, such that the movement includes the z direction and one or more of the x y direction."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "scratch"; "Planarian_Anatomy"; rdfs:label "linear incision" . a owl:Class; rdfs:subClassOf ; "An intracellular non-membrane-bounded organelle comprising a matrix of coalesced lipids surrounded by a phospholipid monolayer. May include associated proteins."; ; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "GO:0005811", "PMID:30608231", "https://doi.org/10.1101/279364"; "Planarian_Anatomy"; rdfs:label "lipid droplet" . _:68ceda a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "An intracellular non-membrane-bounded organelle comprising a matrix of coalesced lipids surrounded by a phospholipid monolayer. May include associated proteins."; "GO:0005811" . _:68ceea a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget ; rdfs:comment "Image is an electron micrograph depicting two lipid droplets (arrowheads) within two different cells. Note the mostly round shape of the droplets. Often, mitochondria can be seen clumped around lipids. Scale bar is 1um." . a owl:Class; rdfs:subClassOf ; "The cavity or channel within a tube or tubular organ such as a blood vessel or the intestine."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "NCIT:C94478"; "Planarian_Anatomy"; rdfs:label "lumen" . _:68cefa a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "The cavity or channel within a tube or tubular organ such as a blood vessel or the intestine."; "NCIT:C94478" . a owl:Class; rdfs:subClassOf , _:68cf0a, _:68cf1a, _:68cf2a; "Zone present along the lateral dorsoventral boundary that sits just underneath the animal, in contact with substrates. It is comprised of bunches of adhesion gland cells whose terminal pores form pore rosettes through the dorsal ventral boundary epidermis.This region of is devoid of rhabdites."; ; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "ISBN:9780070316607", "PMID:20865784"; "Planarian_Anatomy"; rdfs:label "marginal adhesive zone" . _:68cf0a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68cf1a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68cf2a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68cf3a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Zone present along the lateral dorsoventral boundary that sits just underneath the animal, in contact with substrates. It is comprised of bunches of adhesion gland cells whose terminal pores form pore rosettes through the dorsal ventral boundary epidermis.This region of is devoid of rhabdites."; "ISBN:9780070316607" . _:68cf4a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget ; rdfs:comment "Image is an electron micrograph depicting the lateral dorsoventral boundary. Several adhesion gland cells have been labeled with arrowheads to visualize the line of the marginal adhesive zone. Scale bar is 10um." . a owl:Class; rdfs:subClassOf , _:68cf5a; "Any neuron that is capable of some detection of mechanical stimulus involved in sensory perception."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "FBbt:00005919", "PMID:25725068", "PMID:28216315", "WBbt:0008431"; "mechanosensory cell"; "Planarian_Anatomy"; rdfs:label "mechanosensory neuron" . _:68cf5a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68cf6a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Any neuron that is capable of some detection of mechanical stimulus involved in sensory perception."; "FBbt:00005919" . a owl:Class; rdfs:subClassOf , , _:68cf7a, _:68cf8a, _:68cf9a, _:68cfaa, _:68cfba, _:68cfca, _:68cfda, _:68cfea; "Subset of dorsal-ventral muscle cells located in the medial body region."; ; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "PMID:29674431", "PMID:30962434"; "Planarian_Anatomy"; rdfs:label "medial muscle cell" . _:68cf7a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68cf8a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68cf9a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68cfaa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68cfba a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68cfca a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68cfda a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68cfea a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68cffa a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Subset of dorsal-ventral muscle cells located in the medial body region."; "PMID:30962434" . _:68d00a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget ; rdfs:comment "Image is an electron micrograph depicting multiple medial dorsal-ventral muscle cells (arrowheads). At the bottom of this image is the ventral epidermi, to the left is the dark staining of the gut tissue. Scale bar is 10um." . a owl:Class; rdfs:subClassOf , , _:68d01a, _:68d02a, _:68d03a; "A germ cell undergoing meiosis."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "PMID:27330085"; "Planarian_Anatomy"; rdfs:label "meiotic germ cell" . _:68d01a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68d02a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68d03a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68d04a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "A germ cell undergoing meiosis."; "PMID:27330085" . a owl:Class; rdfs:subClassOf , , _:68d05a, _:68d06a, _:68d07a, _:68d08a, _:68d09a, _:68d0aa, _:68d0ba, _:68d0ca, _:68d0da, _:68d0ea; "A tissue-specific, membrane-bounded cytoplasmic organelle within which melanin pigments are synthesized and stored. Melanosomes are synthesized in melanocyte cells."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "GO:0042470"; "Planarian_Anatomy"; rdfs:label "melanosome" . _:68d05a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68d06a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68d07a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68d08a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68d09a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68d0aa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68d0ba a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68d0ca a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68d0da a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68d0ea a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68d0fa a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "A tissue-specific, membrane-bounded cytoplasmic organelle within which melanin pigments are synthesized and stored. Melanosomes are synthesized in melanocyte cells."; "GO:0042470" . a owl:Class; rdfs:subClassOf , , _:68d10a, _:68d11a, _:68d12a, _:68d13a, _:68d14a; "A secreted, mucin-rich extracellular substance coating the epidermal surface of the animal implicated in gliding locomotion, substrate adhesion, innate immunity and predator avoidance."; ; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "PMID:21282632", "PMID:22653920", "UBERON:0000912"; "Planarian_Anatomy"; rdfs:label "mucus" . _:68d10a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68d11a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68d12a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68d13a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68d14a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68d15a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "A secreted, mucin-rich extracellular substance coating the epidermal surface of the animal implicated in gliding locomotion, substrate adhesion, innate immunity and predator avoidance."; "PMID:22653920" . _:68d16a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget ; rdfs:comment "Image is an electron micrograph of the outside of an animal at the marginal adhesive zone. The adhesive papilla are colored in blue and surround each secretory pore (yellow). Mucus (arrowheads) and cilia are both green. Scale bar is 2um." . a owl:Class; rdfs:subClassOf , , _:68d17a; "The external opening and terminus of a protonephridium made by a terminal cell."; ; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "ISBN:9780070316607", "PMID:21828097", "UBERON:0006972"; "Planarian_Anatomy"; rdfs:label "nephridiopore" . _:68d17a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68d18a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "The external opening and terminus of a protonephridium made by a terminal cell."; "ISBN:9780070316607" . _:68d19a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget ; rdfs:comment "Image is an electron micrograph depicting a collecting duct (arrowheads) passing through the basal lamina (BL). Dorsal is up and the scale bar is 5 um." . a owl:Class; rdfs:subClassOf , _:68d1aa; "Cell appendage of the neuron which includes the axon and the dendrite."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "FBbt:00005113", "FMA:61814", "ISBN:9780070316607", "PMID:27612382", "PMID:29547123"; "neuronal process"; "Planarian_Anatomy"; rdfs:label "neurite" . _:68d1aa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68d1ba a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Cell appendage of the neuron which includes the axon and the dendrite."; "FMA:61814" . a owl:Class; rdfs:subClassOf , _:68d1ca, _:68d1da; "A neuron that produces and releases neuropeptides at chemical synapses."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "PMID:24173799", "PMID:25356635", "PMID:27163480"; "cns peptidergic cell", "peptidergic neuron"; "Planarian_Anatomy"; rdfs:label "neuropeptidergic neuron" . _:68d1ca a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68d1da a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68d1ea a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "A neuron that produces and releases neuropeptides at chemical synapses."; "PMID:24173799" . a owl:Class; rdfs:subClassOf ; "Differentiating, immature epidermal cells lacking cilia."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "PMID:26457503", "PMID:28292427"; "Planarian_Anatomy"; rdfs:label "non-ciliated epidermis" . _:68d1fa a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Differentiating, immature epidermal cells lacking cilia."; "PMID:26457503" . a owl:Class; rdfs:subClassOf ; "The double lipid bilayer enclosing the nucleus and separating its contents from the rest of the cytoplasm; includes the intermembrane space, a gap of width 20-40 nm (also called the perinuclear space)."; ; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "GO:0005635", "https://doi.org/10.1101/279364"; "Planarian_Anatomy"; rdfs:label "nuclear envelope" . _:68d20a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "The double lipid bilayer enclosing the nucleus and separating its contents from the rest of the cytoplasm; includes the intermembrane space, a gap of width 20-40 nm (also called the perinuclear space)."; "GO:0005635" . _:68d21a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget ; rdfs:comment "Image is an electron micrograph depicting the nuclear envelope (arrowheads). The nucleus takes up the top left corner of the image and the nuclear envelope encloses it. Scale bar is 200 nm." . a owl:Class; rdfs:subClassOf , _:68d22a; "The inner, i.e. lumen-facing, lipid bilayer of the nuclear envelope."; ; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "GO:0005637"; "inner leaflet"; "Planarian_Anatomy"; rdfs:label "nuclear inner membrane" . _:68d22a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68d23a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "The inner, i.e. lumen-facing, lipid bilayer of the nuclear envelope."; "GO:0005637" . _:68d24a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget ; rdfs:comment "Image is an electron micrograph depicting the nuclear envelope. The nucleus takes up the top left corner of the image and the inner nuclear membrane has been labeled with arrowheads. Scale bar is 200 nm." . a owl:Class; rdfs:subClassOf ; "The volume enclosed by the nuclear inner membrane."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "GO:0031981"; "Planarian_Anatomy"; rdfs:label "nuclear lumen" . _:68d25a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "The volume enclosed by the nuclear inner membrane."; "GO:0031981" . a owl:Class; rdfs:subClassOf , _:68d26a; "The outer, i.e. cytoplasm-facing, lipid bilayer of the nuclear envelope; continuous with the endoplasmic reticulum of the cell and sometimes studded with ribosomes."; ; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "GO:0005640"; "outer leaflet"; "Planarian_Anatomy"; rdfs:label "nuclear outer membrane" . _:68d26a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68d27a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "The outer, i.e. cytoplasm-facing, lipid bilayer of the nuclear envelope; continuous with the endoplasmic reticulum of the cell and sometimes studded with ribosomes."; "GO:0005640" . _:68d28a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget ; rdfs:comment "Image is an electron micrograph depicting the nuclear envelope. The nucleus takes up the top left corner of the image and the outer nuclear membrane has been labeled with arrowheads. Scale bar is 200 nm." . a owl:Class; rdfs:subClassOf ; "The portion of the nuclear lumen proximal to the inner nuclear membrane."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "GO:0034399", "PMID:25404302"; "Planarian_Anatomy"; rdfs:label "nuclear periphery" . _:68d29a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "The portion of the nuclear lumen proximal to the inner nuclear membrane."; "GO:0034399" . a owl:Class; rdfs:subClassOf , , _:68d2aa, _:68d2ba, _:68d2ca, _:68d2da, _:68d2ea, _:68d2fa, _:68d30a, _:68d31a, _:68d32a, _:68d33a, _:68d34a, _:68d35a; "Parenchymal cells that synthesize and contain brown ommonchrome pigment."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "PMID:27240733"; "non-melanin pigment cell"; "Planarian_Anatomy"; rdfs:label "ommochrome pigment cell" . _:68d2aa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68d2ba a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68d2ca a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68d2da a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68d2ea a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68d2fa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68d30a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68d31a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68d32a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68d33a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68d34a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68d35a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68d36a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Parenchymal cells that synthesize and contain brown ommonchrome pigment."; "PMID:27240733" . a owl:Class; rdfs:subClassOf , , _:68d37a, _:68d38a, _:68d39a, _:68d3aa, _:68d3ba, _:68d3ca, _:68d3da; "A neuron projection bundle that connects the retina or its analog in the eye with the brain. This includes the vertebrate optic nerve (not truly a nerve) as well as analogous structures such as the Bolwig nerve in Drosophila."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "PMID:27800171", "UBERON:0004904"; "Planarian_Anatomy"; rdfs:label "optic nerve" . _:68d37a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68d38a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68d39a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68d3aa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68d3ba a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68d3ca a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68d3da a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68d3ea a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "A neuron projection bundle that connects the retina or its analog in the eye with the brain. This includes the vertebrate optic nerve (not truly a nerve) as well as analogous structures such as the Bolwig nerve in Drosophila."; "UBERON:0004904" . a owl:Class; rdfs:subClassOf , , , _:68d3fa, _:68d40a, _:68d41a, _:68d42a, _:68d43a, _:68d44a; "Heavily ciliated, insunk epithelial cells bounding the outside of the pharynx. Outer pharynx epithelial cell nuclei are positioned beneath the pharynx musculature."; ; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "ISBN:9780070316607", "PMID:20511647"; "outer pharynx epidermal cell"; "Planarian_Anatomy"; rdfs:label "pharynx outer epidermal cell" . _:68d3fa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68d40a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68d41a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68d42a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68d43a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68d44a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68d45a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Heavily ciliated, insunk epithelial cells bounding the outside of the pharynx. Outer pharynx epithelial cell nuclei are positioned beneath the pharynx musculature."; "ISBN:9780070316607" . _:68d46a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget ; rdfs:comment "Image is an electron micrograph of a transverse section through the pharynx. The pharynx pouch cavity is at the top. An epidermal cell, a part of the outer epithelium, has been labeled with arrowheads. Immediately deep to the outer epithelial layer of the pharynx is musculature that has been colored. Red = circular; blue = longitudinal. Scale bar is 2 um." . a owl:Class; rdfs:subClassOf ; "A cell that engulfs large particles or cells via invagination of the plasma membrane and creation of a phagosome."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "CL:0000234", "ISBN:9780070316607", "PMID:25956527", "PMID:27501047", "PMID:30471994"; "phagocyte"; "Planarian_Anatomy"; rdfs:label "phagocytic cell" . _:68d47a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "A cell that engulfs large particles or cells via invagination of the plasma membrane and creation of a phagosome."; "ISBN:9780070316607", "PMID:30471994" . a owl:Class; rdfs:subClassOf , , _:68d48a, _:68d49a, _:68d4aa, _:68d4ba; "The distal-most end of the pharnyx containing an opening to the pharynx lumen."; ; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "Planarian_Anatomy"; rdfs:label "pharynx tip" . _:68d48a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68d49a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68d4aa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68d4ba a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68d4ca a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget ; rdfs:comment "Image is an electron micrograph of the tip of the pharynx. Many gland cells can be seen inside, filled with mucus. Scale bar is 5um." . a owl:Class; rdfs:subClassOf ; "A pigment cell is a cell that contains pigment granules."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "CL:0000147", "PMID:26618653"; "pigment producing cell", "pigmented cell"; "Planarian_Anatomy"; rdfs:label "pigment cell" . _:68d4da a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "A pigment cell is a cell that contains pigment granules."; "CL:0000147" . a owl:Class; rdfs:subClassOf , _:68d4ea; "A small, subcellular membrane-bounded vesicle containing pigment and/or pigment precursor molecules. Pigment granule biogenesis is poorly understood, as pigment granules are derived from multiple sources including the endoplasmic reticulum, coated vesicles, lysosomes, and endosomes."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "GO:0048770", "ISBN:9780070316607", "PMID:27551436"; "Planarian_Anatomy"; rdfs:label "pigment granule" . _:68d4ea a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68d4fa a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "A small, subcellular membrane-bounded vesicle containing pigment and/or pigment precursor molecules. Pigment granule biogenesis is poorly understood, as pigment granules are derived from multiple sources including the endoplasmic reticulum, coated vesicles, lysosomes, and endosomes."; "GO:0048770" . a owl:Class; rdfs:subClassOf ; "A wound resulting from an amputation of tissue, usually though the whole depth of the animal encompassing both dorsal and ventral sides, often made with a biopsy punch."; ; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "Planarian_Anatomy"; rdfs:label "plug amputation" . _:68d50a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget ; rdfs:comment "Illustration of an example of a plug amputation showing resultant fragment and donor wound." . a owl:Class; rdfs:subClassOf ; "A breach of the epidermis made with a sharp pointed object, like a needle or an insect pin."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "poke"; "Planarian_Anatomy"; rdfs:label "point incision" . a owl:Class; rdfs:subClassOf ; "An anatomical space that is an opening, usually at the end of a canal or duct, on the surface of the integument or the lining of an internal anatomical space."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "UBERON:0008915"; "Planarian_Anatomy"; rdfs:label "pore" . _:68d51a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "An anatomical space that is an opening, usually at the end of a canal or duct, on the surface of the integument or the lining of an internal anatomical space."; "UBERON:0008915" . a owl:Class; rdfs:subClassOf , , _:68d52a, _:68d53a, _:68d54a, _:68d55a; "A haploid gamete undergoing terminal differentiation."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "Planarian_Anatomy"; rdfs:label "post-meiotic germ cell" . _:68d52a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68d53a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68d54a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68d55a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , , _:68d56a, _:68d57a, _:68d58a, _:68d59a, _:68d5aa; "A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters cross the synaptic cleft and transmit the signal to the postsynaptic membrane."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "GO:0045211", "PMID:24950970"; "post-synaptic cell"; "Planarian_Anatomy"; rdfs:label "postsynaptic cell" . _:68d56a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68d57a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68d58a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68d59a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68d5aa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68d5ba a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters cross the synaptic cleft and transmit the signal to the postsynaptic membrane."; "GO:0045211" . a owl:Class; rdfs:subClassOf , , _:68d5ca, _:68d5da, _:68d5ea, _:68d5fa, _:68d60a; "A diploid germline stem cell or transit amplifying germ cell that has not committed to undergoing meiotic DNA replication, reductive divisions or terminal differentiation."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "Planarian_Anatomy"; rdfs:label "premeiotic germ cell" . _:68d5ca a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68d5da a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68d5ea a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68d5fa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68d60a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:68d61a, _:68d62a; "The part of a synapse that is part of the presynaptic cell."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "GO:0098793", "PMID:24950970"; "pre-synaptic cell"; "Planarian_Anatomy"; rdfs:label "presynaptic cell" . _:68d61a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68d62a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68d63a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "The part of a synapse that is part of the presynaptic cell."; "GO:0098793" . a owl:Class; rdfs:subClassOf , _:68d64a, _:68d65a; "Terminal inflated portion of the axon, containing the specialized apparatus necessary to release neurotransmitters. The axon terminus is considered to be the whole region of thickening and the terminal bouton is a specialized region of it."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "GO:0043195", "PMID:23903188"; "pre-synaptic terminal"; "Planarian_Anatomy"; rdfs:label "presynaptic terminal" . _:68d64a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68d65a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68d66a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Terminal inflated portion of the axon, containing the specialized apparatus necessary to release neurotransmitters. The axon terminus is considered to be the whole region of thickening and the terminal bouton is a specialized region of it."; "GO:0043195" . a owl:Class; rdfs:subClassOf , _:68d67a; "A secretory organelle, typically 50 nm in diameter, of presynaptic nerve terminals; accumulates in high concentrations of neurotransmitters and secretes these into the synaptic cleft by fusion with the 'active zone' of the presynaptic plasma membrane."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "GO:0008021", "PMID:23903188"; "pre-synaptic vesicle"; "Planarian_Anatomy"; rdfs:label "presynaptic vesicle" . _:68d67a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68d68a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "A secretory organelle, typically 50 nm in diameter, of presynaptic nerve terminals; accumulates in high concentrations of neurotransmitters and secretes these into the synaptic cleft by fusion with the 'active zone' of the presynaptic plasma membrane."; "GO:0008021" . a owl:Class; rdfs:subClassOf ; "The largest branch of the triclad intestine. It is comprised of the gastrodermis, a columnar epithelium, surrounded by basal lamina and visceral musculature."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "PMID:17553481", "PMID:20865784", "PMID:21664348", "PMID:27122174", "PMID:28137894", "PMID:29674431"; "main gut branch", "primary intestine branch"; "Planarian_Anatomy"; rdfs:label "primary gut branch" . _:68d69a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "The largest branch of the triclad intestine. It is comprised of the gastrodermis, a columnar epithelium, surrounded by basal lamina and visceral musculature."; "PMID:21664348" . a owl:Class; rdfs:subClassOf , , _:68d6aa, _:68d6ba, _:68d6ca, _:68d6da, _:68d6ea, _:68d6fa, _:68d70a, _:68d71a; "Four large phagocytic cells associated with the embryonic pharynx."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "PMID:28072387"; "primitive endoderm"; "Planarian_Anatomy"; rdfs:label "primitive gut" . _:68d6aa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68d6ba a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68d6ca a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68d6da a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68d6ea a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68d6fa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68d70a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68d71a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68d72a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Four large phagocytic cells associated with the embryonic pharynx."; "PMID:28072387" . a owl:Class; rdfs:subClassOf ; "Gut branches originating from and connected to the tertiary gut branches."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "PMID:21664348"; "Planarian_Anatomy"; rdfs:label "quarternary gut branch" . _:68d73a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Gut branches originating from and connected to the tertiary gut branches."; "PMID:21664348" . a owl:Class; rdfs:subClassOf , , _:68d74a, _:68d75a, _:68d76a, _:68d77a; "An organ involved in reproduction"; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "PMID:16344473", "PMID:17376870", "PMID:20844018", "PMID:22074376", "PMID:25278423", "PMID:27074666", "UBERON:0003133", "https://doi.org/10.1101/279364"; "Planarian_Anatomy"; rdfs:label "reproductive organ" . _:68d74a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68d75a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68d76a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68d77a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68d78a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "An organ involved in reproduction"; "UBERON:0003133" . a owl:Class; rdfs:subClassOf , , _:68d79a, _:68d7aa, _:68d7ba; "Any anatomical structure that is part of the reproductive system."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "PMID:17376870", "UBERON:0005156"; "Planarian_Anatomy"; rdfs:label "reproductive structure" . _:68d79a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68d7aa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68d7ba a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68d7ca a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Any anatomical structure that is part of the reproductive system."; "UBERON:0005156" . a owl:Class; rdfs:subClassOf , , _:68d7da, _:68d7ea, _:68d7fa, _:68d80a, _:68d81a, _:68d82a, _:68d83a; "The light sensing structure consisting of photoreceptor neuron dendrites that project into the optic lumen and show close associations with eumelanin-containing pigment cup cells."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "PMID:15760337", "PMID:16033796", "PMID:21852957", "PMID:26017970"; "Planarian_Anatomy"; rdfs:label "rhabdome" . _:68d7da a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68d7ea a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68d7fa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68d80a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68d81a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68d82a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68d83a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68d84a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "The light sensing structure consisting of photoreceptor neuron dendrites that project into the optic lumen and show close associations with eumelanin-containing pigment cup cells."; "PMID:15760337", "PMID:16033796", "PMID:21852957" . a owl:Class; rdfs:subClassOf , , _:68d85a, _:68d86a, _:68d87a, _:68d88a, _:68d89a, _:68d8aa, _:68d8ba; "The dendritic process of a bipolar photoreceptor neuron that projects into the optic cup lumen and senses light."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "GO:0016028", "PMID:15760337", "PMID:16033796", "PMID:18202849", "PMID:20865784", "PMID:21282632", "PMID:21852957", "PMID:22445864", "PMID:25772472", "PMID:26618653", "PMID:27800171"; "Planarian_Anatomy"; rdfs:label "rhabdomere" . _:68d85a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68d86a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68d87a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68d88a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68d89a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68d8aa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68d8ba a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68d8ca a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "The dendritic process of a bipolar photoreceptor neuron that projects into the optic cup lumen and senses light."; "PMID:15760337", "PMID:16033796", "PMID:21852957" . a owl:Class; rdfs:subClassOf , , _:68d8da, _:68d8ea, _:68d8fa, _:68d90a; "A tubular structure that transports secreted or excreted substances."; ; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "PMID:30383829", "UBERON:0000058"; "secretory canal"; "Planarian_Anatomy"; rdfs:label "secretory duct" . _:68d8da a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68d8ea a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68d8fa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68d90a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68d91a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "A tubular structure that transports secreted or excreted substances."; "UBERON:0000058" . _:68d92a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget ; rdfs:comment "Image is an electron micrograph of a viscid gland cell passing across the basal lamina (BL). This cell secretes a specialized type of mucus. The secretory duct (arrowhead) transports mucus to the outside of the animal, through the secretory pore. Ventral is down and scale bar is 5um." . a owl:Class; rdfs:subClassOf , _:68d93a; "A small subcellular vesicle, surrounded by a membrane, that is formed from the Golgi apparatus and contains a highly concentrated protein destined for secretion. Secretory granules move towards the periphery of the cell and upon stimulation, their membranes fuse with the cell membrane, and their protein load is exteriorized. Processing of the contained protein may take place in secretory granules."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "GO:0030141", "PMID:29100657"; "Planarian_Anatomy"; rdfs:label "secretory granule" . _:68d93a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68d94a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "A small subcellular vesicle, surrounded by a membrane, that is formed from the Golgi apparatus and contains a highly concentrated protein destined for secretion. Secretory granules move towards the periphery of the cell and upon stimulation, their membranes fuse with the cell membrane, and their protein load is exteriorized. Processing of the contained protein may take place in secretory granules."; "GO:0030141" . a owl:Class; rdfs:subClassOf ; "One of the cells of the body that compose the tissues, organs, and parts of that individual other than the germ cells."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "BTO:0001268", "CL:0002371", "PMID:20599901", "PMID:21852957", "PMID:22074376", "PMID:22371573", "PMID:22385657", "PMID:25404302", "PMID:27606067", "PMID:28757112"; "Planarian_Anatomy"; rdfs:label "somatic cell" . _:68d95a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "One of the cells of the body that compose the tissues, organs, and parts of that individual other than the germ cells."; "BTO:0001268" . a owl:Class; rdfs:subClassOf , , _:68d96a; "A non-germline cell within the ovary or testis."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "PMID:27163480", "PMID:27330085", "WBbt:0007815"; "gonadal niche cell", "somatic gonadal niche cell", "somatic gonadal support cell"; "Planarian_Anatomy"; rdfs:label "somatic gonadal cell" . _:68d96a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68d97a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "A non-germline cell within the ovary or testis."; "PMID:27163480", "PMID:27330085" . a owl:Class; rdfs:subClassOf ; "A presumptive progenitor cell that expresses both pan-neoblast markers and pro-differentiation gene(s), frequently developmental transcription factors, implicated in lineage commitment and tissue-specific differentiation programs."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "PMID:25254346", "PMID:26651295", "PMID:27542689", "PMID:29674432", "PMID:30962434"; "Planarian_Anatomy"; rdfs:label "specialized neoblast" . _:68d98a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "A presumptive progenitor cell that expresses both pan-neoblast markers and pro-differentiation gene(s), frequently developmental transcription factors, implicated in lineage commitment and tissue-specific differentiation programs."; "PMID:23404104" . a owl:Class; rdfs:subClassOf , , _:68d99a, _:68d9aa; "A thin, flexible rod that anchors an egg capsule to a solid substrate."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "ISBN:9780070316607"; "Planarian_Anatomy"; rdfs:label "stalk" . _:68d99a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68d9aa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68d9ba a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "A thin, flexible rod that anchors an egg capsule to a solid substrate."; "ISBN:9780070316607" . a owl:Class; rdfs:subClassOf ; "A wound produced by non-autonomous physical means."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "Planarian_Anatomy"; rdfs:label "surgical wound" . a owl:Class; rdfs:subClassOf , _:68d9ca; "The junction between a nerve fiber of one neuron and another neuron, muscle fiber or glial cell. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "GO:0045202", "PMID:18202849", "PMID:18287199", "PMID:21282632"; "neural synapse", "neuronal synapse"; "Planarian_Anatomy"; rdfs:label "synapse" . _:68d9ca a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68d9da a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "The junction between a nerve fiber of one neuron and another neuron, muscle fiber or glial cell. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane."; "GO:0045202" . a owl:Class; rdfs:subClassOf , _:68d9ea, _:68d9fa; "The narrow gap that separates the presynaptic and postsynaptic membranes, into which neurotransmitter is released."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "GO:0043083", "PMID:23903188"; "Planarian_Anatomy"; rdfs:label "synaptic cleft" . _:68d9ea a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68d9fa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68da0a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "The narrow gap that separates the presynaptic and postsynaptic membranes, into which neurotransmitter is released."; "GO:0043083" . a owl:Class; rdfs:subClassOf , _:68da1a; "Vesicles that store various neurotransmitters that are released at the synapse. The release is regulated by a voltage-dependent calcium channel. Vesicles are essential for propagating nerve impulses between neurons and are constantly recreated by the cell. [Wikipedia]"; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "GO:0008021", "PMID:24950970"; "Planarian_Anatomy"; rdfs:label "synaptic vesicle" . _:68da1a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68da2a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Vesicles that store various neurotransmitters that are released at the synapse. The release is regulated by a voltage-dependent calcium channel. Vesicles are essential for propagating nerve impulses between neurons and are constantly recreated by the cell. [Wikipedia]"; "GO:0008021" . a owl:Class; rdfs:subClassOf ; "A proteinaceous scaffold found between homologous chromosomes during meiosis. It consists of 2 lateral elements and a central element, all running parallel to each other. Transverse filaments connect the lateral elements to the central element."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "GO:0000795", "PMID:25404302"; "Planarian_Anatomy"; rdfs:label "synaptonemal complex" . a owl:Class; rdfs:subClassOf , , _:68da3a, _:68da4a, _:68da5a, _:68da6a; "The posterior-medial region of the tail margin."; ; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "Planarian_Anatomy"; rdfs:label "tail tip" . _:68da3a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68da4a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68da5a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68da6a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68da7a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget ; rdfs:comment "Illustration of the tail tip (in green)." . a owl:Class; rdfs:subClassOf , _:68da8a; "The terminal region of a linear chromosome that includes the telomeric DNA repeats and associated proteins."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "GO:0000781", "PMID:22371573", "PMID:25404302", "https://doi.org/10.1101/279364"; "Planarian_Anatomy"; rdfs:label "telomere" . _:68da8a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68da9a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "The terminal region of a linear chromosome that includes the telomeric DNA repeats and associated proteins."; "GO:0000781" . a owl:Class; rdfs:subClassOf , _:68daaa; "A cell-cell junction in invertebrates that seals cells together in an epithelium in a way that prevents even small molecules from leaking from one side of the sheet to the other."; ; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "GO:0070160"; "Planarian_Anatomy"; rdfs:label "septate junction" . _:68daaa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68daba a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "A cell-cell junction in invertebrates that seals cells together in an epithelium in a way that prevents even small molecules from leaking from one side of the sheet to the other."; "GO:0070160" . _:68daca a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget ; rdfs:comment "Image is an electron micrograph depicting the inner epithelium of the pharynx. Septate junctions (arrowheads) can be clearly seen between cells. Scale bar is 200 nm." . a owl:Class; rdfs:subClassOf ; "A wound resulting from a piece of tissue removed from the lateral margin at any given point that extendes interiorly to more medial structures."; ; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "Planarian_Anatomy"; rdfs:label "wedge amputation" . _:68dada a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget ; rdfs:comment "Illustration of a wedge amputation depicting the resultant donor wound and wedge fragment." . a owl:Class; rdfs:subClassOf ; "An injury that breaches the epidermis."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "injury"; "Planarian_Anatomy"; rdfs:label "wound" . a owl:Class; rdfs:subClassOf , ; "A sorted cell population enriched for irradiation-sensitive, cycling cells (4n cells, with high levels of Hoescht 33342 staining) with scant cytoplasm (low levels of calcein-AM staining). X1 cells are enriched for cycling neoblasts."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "PMID:16872450", "PMID:17670787", "PMID:18456843", "PMID:18786419", "PMID:19048075", "PMID:20215344", "PMID:20223763", "PMID:21937596", "PMID:22385657", "PMID:22427692", "PMID:22543868", "PMID:22549959", "PMID:23235145", "PMID:23629965", "PMID:24120894", "PMID:24367277", "PMID:24992682", "PMID:25254346", "PMID:25558068", "PMID:25956527", "PMID:26114597", "PMID:26457503", "PMID:26711341", "PMID:27013241", "PMID:27068018", "PMID:27150006", "PMID:27502555", "PMID:27523733", "PMID:27551436", "PMID:28137894", "PMID:29100657", "PMID:29557542", "PMID:29674432", "PMID:29906446", "PMID:30194301"; "X1", "X1 cell population", "X1 neoblast", "X1 population"; "Planarian_Anatomy"; rdfs:label "X1 cell" . _:68daea a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "A sorted cell population enriched for irradiation-sensitive, cycling cells (4n cells, with high levels of Hoescht 33342 staining) with scant cytoplasm (low levels of calcein-AM staining). X1 cells are enriched for cycling neoblasts."; "PMID:16872450" . a owl:Class; rdfs:subClassOf , ; "A heterogeneous sorted cell population of unstained planarian cells with similar size and complexity to irradiation-sensitive, cycling cells contained in the X1 gate. Unlike X1 cells, X1(FS) cells are amenable to cell transplantation."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "PMID:21566185"; "Planarian_Anatomy"; rdfs:label "X1(FS) cell" . _:68dafa a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "A heterogeneous sorted cell population of unstained planarian cells with similar size and complexity to irradiation-sensitive, cycling cells contained in the X1 gate. Unlike X1 cells, X1(FS) cells are amenable to cell transplantation."; "PMID:21566185" . a owl:Class; rdfs:subClassOf , ; "A sorted cell population containing irradiation-sensitive and irradiation-insensitive cells, characterized by weak Hoescht 33342 and calcein-AM staining. X2 cell populations contain neoblasts as well as a variety of lineage-dedicated post-mitotic progenitor cells."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "PMID:16872450", "PMID:18786419", "PMID:19048075", "PMID:20215344", "PMID:20223763", "PMID:22427692", "PMID:22543868", "PMID:23629965", "PMID:24367277", "PMID:25017721", "PMID:27013241", "PMID:27150006", "PMID:27502555", "PMID:27606067", "PMID:27864883", "PMID:28137894", "PMID:29674432"; "Planarian_Anatomy"; rdfs:label "X2 cell" . _:68db0a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "A sorted cell population containing irradiation-sensitive and irradiation-insensitive cells, characterized by weak Hoescht 33342 and calcein-AM staining. X2 cell populations contain neoblasts as well as a variety of lineage-dedicated post-mitotic progenitor cells."; "PMID:16872450" . a owl:Class; rdfs:subClassOf , ; "A sorted cell population of irradiation-insensitive cells that contains a variety of post-mitotic, differentiated cell types."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "PMID:16872450", "PMID:17670787", "PMID:18456843", "PMID:18786419", "PMID:19048075", "PMID:20215344", "PMID:20223763", "PMID:22427692", "PMID:22479207", "PMID:22543868", "PMID:23629965", "PMID:24367277", "PMID:24992682", "PMID:25558068", "PMID:25956527", "PMID:26114597", "PMID:26457503", "PMID:26711341", "PMID:27013241", "PMID:27502555", "PMID:29100657", "PMID:29674432", "PMID:29906446", "PMID:30194301"; "Xins", "Xins cell population", "Xins cells"; "Planarian_Anatomy"; rdfs:label "Xins cell" . _:68db1a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "A sorted cell population of irradiation-insensitive cells that contains a variety of post-mitotic, differentiated cell types."; "PMID:16872450" . a owl:Class; rdfs:subClassOf , , _:68db2a, _:68db3a, _:68db4a, _:68db5a; "Posterior to the pharynx."; ; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "post pharyngeal", "post-pharyngeal", "post-pharyngeal region", "postpharyngeal region"; "Planarian_Anatomy"; rdfs:label "postpharyngeal region" . _:68db2a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68db3a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68db4a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68db5a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf ; "Adjacent to blastema, or proximal to blastema."; ; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "post-blastema", "postblastema", "postblastema region"; "Planarian_Anatomy"; rdfs:label "post-blastema region" . _:68db6a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget ; rdfs:comment "Illustration of the post-blastema region(in green) in the anterior region of a regenerating tail fragment." . a owl:Class; rdfs:subClassOf ; "A fragment derived from a spontaneous or induced fission event."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "Planarian_Anatomy"; rdfs:label "fission fragment" . a owl:Class; rdfs:comment "term is not needed."; rdfs:label "obsolete oblique"; owl:deprecated true . a owl:Class; rdfs:subClassOf ; "The avascular cellular layers that cover body surfaces and cavities and may form glands."; ; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "NCIT:C12710", "UBERON:0000483"; "Planarian_Anatomy"; rdfs:label "epithelium" . _:68db7a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "The avascular cellular layers that cover body surfaces and cavities and may form glands."; "NCIT:C12710" . _:68db8a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget ; rdfs:comment "Image is an electron micrograph of a transverse section of a planarian through the pharyngeal region depicting 3 different epithelial layers (arrowheads). At the top is the dorsal epidermis, in the middle is the epithelium of the pharyngeal pouch, and at the bottom of the image, the outer epithelium of the pharynx. Scale bar is 5um." . a owl:Class; rdfs:subClassOf , , _:68db9a, _:68dbaa, _:68dbba, _:68dbca; "The triclad planarian gut is serially bifrucated into connected lumens where each bifrucation is a branch."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "Planarian_Anatomy"; rdfs:label "gut branch" . _:68db9a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68dbaa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68dbba a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68dbca a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:68dbda; "Organ that is associated with an embryo and derived from the zygote from which it develops, but which does not contribute to the embryo proper or to structures that are part of the same organism after embryogenesis."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "Planarian_Anatomy"; rdfs:label "extraembryonic organ" . _:68dbda a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:68dbea; "This is a manufactured term, that serves the purpose of allow the parts of a chromosome to have an is_a path to the root."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "SO:0000830"; "Planarian_Anatomy"; rdfs:label "chromosome part" . _:68dbea a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68dbfa a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "This is a manufactured term, that serves the purpose of allow the parts of a chromosome to have an is_a path to the root."; "SO:0000830" . a owl:Class; rdfs:subClassOf owl:Thing; "An event or occurrence that causes damage to a tissue or organ."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "insult"; "Planarian_Anatomy"; rdfs:label "perturbation" . a owl:Class; rdfs:subClassOf ; "structural element of a chromosome, for example, a telomere and a centromere"; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "SO:0000628"; "chromosomal structural element"; "Planarian_Anatomy"; rdfs:label "chromosomal_structural_element" . _:68dc0a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "structural element of a chromosome, for example, a telomere and a centromere"; "SO:0000628" . a owl:Class; rdfs:subClassOf ; "A longitudinal fragment containing the preexisting midline and medial structures."; ; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "Planarian_Anatomy"; rdfs:label "thick fragment" . _:68dc1a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget ; rdfs:comment "Illustration of a thick fragment (in green)." . a owl:Class; rdfs:subClassOf ; "A longitudinal fragment lacking a midline and medial structures."; ; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "Planarian_Anatomy"; rdfs:label "thin fragment" . _:68dc2a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget ; rdfs:comment "Illustration of a thin fragment (in green)." . a owl:Class; rdfs:subClassOf ; "A piece of tissue isolated from the body."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "piece"; "Planarian_Anatomy"; rdfs:label "fragment" . a owl:Class; rdfs:subClassOf ; "A region bounded by any sagittal plane though the animal and the left or right side of the animal. NOTE: sagittal plane is an anatomical plane that divides a bilateral body into left and right parts, not necessarily of even size"; ; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "Planarian_Anatomy"; rdfs:label "longitudinal region" . _:68dc3a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget ; rdfs:comment "Illustration of a longitudinal region (green)." . a owl:Class; rdfs:subClassOf ; "An intentional wound produced by non-autonomous chemical means."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "Planarian_Anatomy"; rdfs:label "chemical wound" . a owl:Class; rdfs:subClassOf ; "A wound resulting from the removal of tissue, usually though the whole depth of the animal encompassing both dorsal and ventral sides, often made with a biopsy punch."; ; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "Planarian_Anatomy"; rdfs:label "plug wound" . _:68dc4a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget ; rdfs:comment "Illustration of a wound left in a donor animal resulting from a plug amputation." . a owl:Class; rdfs:subClassOf ; "A wound resulting from the removal of a piece of tissue from the lateral margin at any given point that extends interiorly to more medial structures."; ; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "Planarian_Anatomy"; rdfs:label "wedge wound" . _:68dc5a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget ; rdfs:comment "Illustration of a wedge wound." . a owl:Class; rdfs:subClassOf ; "A fragment that has undergone wound healing and is undergoing tissue replacement and morphallaxis."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "Planarian_Anatomy"; rdfs:label "regenerating fragment" . a owl:Class; rdfs:subClassOf ; "An orientation quality inhering in a bearer by virtue of the bearer having a position that is in the sagittal plane. This plane runs longitudinally and is not necessarily medial."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "longitudinal orientation"; "Planarian_Anatomy"; rdfs:label "sagittal orientation" . a owl:Class; rdfs:subClassOf ; "An orientation quality inhering in a bearer by virtue of the bearer having a position that is in the parasagittal plane, which runs longitudinally, and is never medial."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "PATO:0005023"; "Planarian_Anatomy"; rdfs:label "parasagittal orientation" . _:68dc6a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "An orientation quality inhering in a bearer by virtue of the bearer having a position that is in the parasagittal plane, which runs longitudinally, and is never medial."; "PATO:0005023" . a owl:Class; rdfs:subClassOf ; "An anatomical entity consisting of a single or a few multinucleated structures"; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "AEO:0000203", "BTO:0005784", "PMID:27330085"; "Planarian_Anatomy"; rdfs:label "syncytium" . _:68dc7a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "An anatomical entity consisting of a single or a few multinucleated structures"; "AEO:0000203" . a owl:Class; rdfs:subClassOf ; "Cytoplasmic part which forms a distinctive granular particle, which may or may not be visible using light microscopy."; ; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "MICRO:0000215"; "Planarian_Anatomy"; rdfs:label "intracellular granule" . _:68dc8a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Cytoplasmic part which forms a distinctive granular particle, which may or may not be visible using light microscopy."; "MICRO:0000215" . _:68dc9a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget ; rdfs:comment "Image is an electron micrograph depicting a cell with many intracellular granules (arrowheads) visible in the cytoplasm. The scale bar is 1um." . a owl:Class; rdfs:subClassOf ; "Any number of cells from dissociated planarian tissue sorted via a FACS sorter for any parameter."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "Planarian_Anatomy"; rdfs:label "FACS sorted cell population" . a owl:Class; rdfs:subClassOf ; "Cells isolated from dissociated planarian tissue."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "Planarian_Anatomy"; rdfs:label "derived cell population" . a owl:Class; rdfs:subClassOf , , _:68dcaa, _:68dcba, _:68dcca, _:68dcda, _:68dcea, _:68dcfa, _:68dd0a, _:68dd1a; "An epithelial monolayer lining the pharynx pouch cavity."; ; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "OCLC:16809160"; "Planarian_Anatomy"; rdfs:label "pharynx pouch epithelium" . _:68dcaa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68dcba a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68dcca a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68dcda a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68dcea a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68dcfa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68dd0a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68dd1a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68dd2a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "An epithelial monolayer lining the pharynx pouch cavity."; "OCLC:16809160" . _:68dd3a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget ; rdfs:comment "Image is an electron micrograph of a transverse slice through the parapharyngeal region. It includes the dorsal epidermis, pharynx pouch epithelium (arrowheads), and a portion of the pharynx. Dorsal is up and the lumen of the pouch is visible as the white stripe in the middle of the micrograph. Scale bar is 5um." . a owl:Class; rdfs:subClassOf , _:68dd4a, _:68dd5a, _:68dd6a, _:68dd7a; "Epithelial surface lining the sperm duct."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "PMID:19022767", "PMID:22074376"; "Planarian_Anatomy"; rdfs:label "sperm duct epithelial surface" . _:68dd4a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68dd5a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68dd6a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68dd7a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68dd8a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Epithelial surface lining the sperm duct."; "PMID:19022767", "PMID:22074376" . a owl:Class; rdfs:subClassOf , , _:68dd9a, _:68ddaa, _:68ddba, _:68ddca, _:68ddda, _:68ddea, _:68ddfa, _:68de0a, _:68de1a, _:68de2a, _:68de3a, _:68de4a; "A loosely organized collection of connective tissue and cells, including neoblasts and their immediate progeny, located in the space outside of the organs between the body wall musculature and the gut."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "OCLC:16809160"; "mesenchyme"; "Planarian_Anatomy"; rdfs:label "parenchyma" . _:68dd9a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68ddaa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68ddba a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68ddca a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68ddda a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68ddea a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68ddfa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68de0a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68de1a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68de2a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68de3a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68de4a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68de5a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "A loosely organized collection of connective tissue and cells, including neoblasts and their immediate progeny, located in the space outside of the organs between the body wall musculature and the gut."; "OCLC:16809160" . a owl:Class; owl:equivalentClass _:68de6a; rdfs:subClassOf , _:68deba, _:68deca; "The dorsal region of the tail."; ; "dorsal region of tail region"; "Planarian_Anatomy"; "PLANA:0003000"; rdfs:label "dorsal region of tail" . _:68de6a a owl:Class; owl:intersectionOf _:68de8a . _:68de8a rdf:first _:68de7a; rdf:rest _:68deaa . _:68de7a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68deaa rdf:first _:68de9a; rdf:rest rdf:nil . _:68de9a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68deba a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68deca a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68deda a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget ; rdfs:comment "Illustration of the dorsal region of the tail (in green)." . a owl:Class; owl:equivalentClass _:68deea; rdfs:subClassOf , _:68df3a, _:68df4a; "The lateral region of the medio-lateral axis of the whole animal."; "lateral region of whole organism"; "Planarian_Anatomy"; "PLANA:0003001"; rdfs:label "lateral region of the whole animal" . _:68deea a owl:Class; owl:intersectionOf _:68df0a . _:68df0a rdf:first _:68defa; rdf:rest _:68df2a . _:68defa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68df2a rdf:first _:68df1a; rdf:rest rdf:nil . _:68df1a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68df3a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68df4a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; owl:equivalentClass _:68df5a; rdfs:subClassOf , _:68dfaa, _:68dfba; "The anterior region of the eye."; "anterior region of eye"; "Planarian_Anatomy"; "PLANA:0003002"; rdfs:label "anterior region of the eye" . _:68df5a a owl:Class; owl:intersectionOf _:68df7a . _:68df7a rdf:first _:68df6a; rdf:rest _:68df9a . _:68df6a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68df9a rdf:first _:68df8a; rdf:rest rdf:nil . _:68df8a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68dfaa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68dfba a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; owl:equivalentClass _:68dfca; rdfs:subClassOf , _:68e01a, _:68e02a; "The posterior region of the eye."; "posterior region of eye"; "Planarian_Anatomy"; "PLANA:0003003"; rdfs:label "posterior region of the eye" . _:68dfca a owl:Class; owl:intersectionOf _:68dfea . _:68dfea rdf:first _:68dfda; rdf:rest _:68e00a . _:68dfda a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68e00a rdf:first _:68dffa; rdf:rest rdf:nil . _:68dffa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68e01a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68e02a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; owl:equivalentClass _:68e03a; rdfs:subClassOf , _:68e08a, _:68e09a; "The center-most region just anterior to the pharynx"; "prepharyngeal region of midline"; "Planarian_Anatomy"; "PLANA:0003004"; rdfs:label "prepharyngeal midline" . _:68e03a a owl:Class; owl:intersectionOf _:68e05a . _:68e05a rdf:first _:68e04a; rdf:rest _:68e07a . _:68e04a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68e07a rdf:first _:68e06a; rdf:rest rdf:nil . _:68e06a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68e08a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68e09a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:68e0aa; "cell which is part of the testis"; "Planarian_Anatomy"; "PLANA:0003100"; rdfs:label "testis cell" . _:68e0aa a owl:Class; owl:intersectionOf _:68e0ba . _:68e0ba rdf:first ; rdf:rest _:68e0da . _:68e0da rdf:first _:68e0ca; rdf:rest rdf:nil . _:68e0ca a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68e0ea a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "cell which is part of the testis"; "PMID:29674431" . a owl:Class; rdfs:subClassOf _:68e0fa; "cell which is part of the ventral epidermis"; "ventral ciliated cell", "ventral epithelial cell", "ventral motile ciliated cell", "ventral multiciliated cell"; "Planarian_Anatomy"; "PLANA:0003101"; rdfs:label "ventral epidermis cell" . _:68e0fa a owl:Class; owl:intersectionOf _:68e10a . _:68e10a rdf:first ; rdf:rest _:68e12a . _:68e12a rdf:first _:68e11a; rdf:rest rdf:nil . _:68e11a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68e13a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "cell which is part of the ventral epidermis"; "PMID:22479207", "PMID:23144623" . a owl:Class; rdfs:subClassOf _:68e14a; "cell which is part of the visual system"; "visual cell"; "Planarian_Anatomy"; "PLANA:0003102"; rdfs:label "visual system cell" . _:68e14a a owl:Class; owl:intersectionOf _:68e15a . _:68e15a rdf:first ; rdf:rest _:68e17a . _:68e17a rdf:first _:68e16a; rdf:rest rdf:nil . _:68e16a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68e18a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "cell which is part of the visual system"; "PMID:17905225", "PMID:24922054" . a owl:Class; rdfs:subClassOf , _:68e19a; "cell which is part of the eye"; "photoreceptor cell", "photosensitive cell"; "Planarian_Anatomy"; "PLANA:0003103"; rdfs:label "eye cell" . _:68e19a a owl:Class; owl:intersectionOf _:68e1aa . _:68e1aa rdf:first ; rdf:rest _:68e1ca . _:68e1ca rdf:first _:68e1ba; rdf:rest rdf:nil . _:68e1ba a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68e1da a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "cell which is part of the eye"; "PMID:29357350" . a owl:Class; rdfs:subClassOf , _:68e1ea; "cell which is part of the enteric musculature"; "gut muscle cell", "intestinal muscle cell"; "Planarian_Anatomy"; "PLANA:0003104"; rdfs:label "enteric muscle cell" . _:68e1ea a owl:Class; owl:intersectionOf _:68e1fa . _:68e1fa rdf:first ; rdf:rest _:68e21a . _:68e21a rdf:first _:68e20a; rdf:rest rdf:nil . _:68e20a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68e22a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "cell which is part of the enteric musculature"; "PMID:23954785", "PMID:25558068" . a owl:Class; rdfs:subClassOf _:68e23a; "cell which is part of the dorsal region of the epidermis"; "dorsal epithelial cell"; "Planarian_Anatomy"; "PLANA:0003105"; rdfs:label "dorsal epidermis cell" . _:68e23a a owl:Class; owl:intersectionOf _:68e24a . _:68e24a rdf:first ; rdf:rest _:68e26a . _:68e26a rdf:first _:68e25a; rdf:rest rdf:nil . _:68e25a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68e27a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "cell which is part of the dorsal region of the epidermis"; "PMID:22479207" . a owl:Class; rdfs:subClassOf _:68e28a; "cell which is part of the adhesion gland"; "Planarian_Anatomy"; "PLANA:0003106"; rdfs:label "adhesion gland cell" . _:68e28a a owl:Class; owl:intersectionOf _:68e29a . _:68e29a rdf:first ; rdf:rest _:68e2ba . _:68e2ba rdf:first _:68e2aa; rdf:rest rdf:nil . _:68e2aa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68e2ca a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "cell which is part of the adhesion gland"; "PMID:16890156", "PMID:28976975" . a owl:Class; rdfs:subClassOf _:68e2da; "cell which is part of the body wall musculature"; "body wall muscle fiber", "body-wall muscle cell"; "Planarian_Anatomy"; "PLANA:0003107"; rdfs:label "body wall muscle cell" . _:68e2da a owl:Class; owl:intersectionOf _:68e2ea . _:68e2ea rdf:first ; rdf:rest _:68e30a . _:68e30a rdf:first _:68e2fa; rdf:rest rdf:nil . _:68e2fa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68e31a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "cell which is part of the body wall musculature"; "PMID:23954785", "PMID:24992682", "PMID:25254346", "PMID:25725068", "PMID:26525673" . a owl:Class; rdfs:subClassOf , _:68e32a; "cell which is part of the gastrodermis"; "gut cell", "intestinal cell" . _:68e32a a owl:Class; owl:intersectionOf _:68e33a . _:68e33a rdf:first ; rdf:rest _:68e35a . _:68e35a rdf:first _:68e34a; rdf:rest rdf:nil . _:68e34a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . "Planarian_Anatomy"; "PLANA:0003108"; rdfs:label "gastrodermal cell" . _:68e36a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "cell which is part of the gastrodermis"; "PMID:19174194", "PMID:22479207", "PMID:27122174" . a owl:Class; rdfs:subClassOf _:68e37a; "cell which is part of the anterior pole"; "Planarian_Anatomy"; "PLANA:0003109"; rdfs:label "anterior pole cell" . _:68e37a a owl:Class; owl:intersectionOf _:68e38a . _:68e38a rdf:first ; rdf:rest _:68e3aa . _:68e3aa rdf:first _:68e39a; rdf:rest rdf:nil . _:68e39a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68e3ba a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "cell which is part of the anterior pole"; "PMID:24992682", "PMID:29674431", "PMID:30471994" . a owl:Class; rdfs:subClassOf , _:68e3ca; "neuron which is part of the pharynx"; "pharyngeal neuron"; "Planarian_Anatomy"; "PLANA:0003110"; rdfs:label "pharynx neuron" . _:68e3ca a owl:Class; owl:intersectionOf _:68e3da . _:68e3da rdf:first ; rdf:rest _:68e3fa . _:68e3fa rdf:first _:68e3ea; rdf:rest rdf:nil . _:68e3ea a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68e40a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "neuron which is part of the pharynx"; "PMID:18202849", "PMID:29674431", "PMID:30485821" . a owl:Class; rdfs:subClassOf , _:68e41a; "epithelial cell which is part of the pharynx"; "pharynx epithelial cell"; "Planarian_Anatomy"; "PLANA:0003111"; rdfs:label "pharynx epithelial cell" . _:68e41a a owl:Class; owl:intersectionOf _:68e42a . _:68e42a rdf:first ; rdf:rest _:68e44a . _:68e44a rdf:first _:68e43a; rdf:rest rdf:nil . _:68e43a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68e45a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "epithelial cell which is part of the pharynx"; "PMID:20511647" . a owl:Class; rdfs:subClassOf , _:68e46a; "muscle cell which is part of the pharynx"; "pharynx muscle fiber"; "Planarian_Anatomy"; "PLANA:0003112"; rdfs:label "pharynx muscle cell" . _:68e46a a owl:Class; owl:intersectionOf _:68e47a . _:68e47a rdf:first ; rdf:rest _:68e49a . _:68e49a rdf:first _:68e48a; rdf:rest rdf:nil . _:68e48a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68e4aa a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "muscle cell which is part of the pharynx"; "PMID:27068018" . a owl:Class; rdfs:subClassOf , _:68e4ba; "epithelial cell which is part of the pharynx pouch"; "pharyngeal cavity epithelial cell", "pharynx cavity epithelial cell"; "Planarian_Anatomy"; "PLANA:0003113"; rdfs:label "pharynx pouch epithelial cell" . _:68e4ba a owl:Class; owl:intersectionOf _:68e4ca . _:68e4ca rdf:first ; rdf:rest _:68e4ea . _:68e4ea rdf:first _:68e4da; rdf:rest rdf:nil . _:68e4da a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:68e4fa; "pigment granule which is part of the eumelanin"; "melanin", "melanosome", "photoreceptor pigment"; "Planarian_Anatomy"; "PLANA:0003114"; rdfs:label "melanin pigment granule" . _:68e4fa a owl:Class; owl:intersectionOf _:68e50a . _:68e50a rdf:first ; rdf:rest _:68e52a . _:68e52a rdf:first _:68e51a; rdf:rest rdf:nil . _:68e51a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68e53a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "pigment granule which is part of the eumelanin"; "PMID:25356635", "PMID:26017970", "PMID:27551436" . a owl:Class; rdfs:subClassOf _:68e54a; "pigment granule which is part of the ommochrome pigment cell"; "Planarian_Anatomy"; "PLANA:0003115"; rdfs:label "ommochrome pigment granule" . _:68e54a a owl:Class; owl:intersectionOf _:68e55a . _:68e55a rdf:first ; rdf:rest _:68e57a . _:68e57a rdf:first _:68e56a; rdf:rest rdf:nil . _:68e56a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf _:68e58a; "cell which is part of the parenchyma"; "Planarian_Anatomy"; "PLANA:0003116"; rdfs:label "parenchymal cell" . _:68e58a a owl:Class; owl:intersectionOf _:68e59a . _:68e59a rdf:first ; rdf:rest _:68e5ba . _:68e5ba rdf:first _:68e5aa; rdf:rest rdf:nil . _:68e5aa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68e5ca a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "cell which is part of the parenchyma"; "PMID:19247960", "PMID:29674431" . a owl:Class; rdfs:subClassOf _:68e5da; "cell which is part of the parapharyngeal region"; "Planarian_Anatomy"; "PLANA:0003117"; rdfs:label "parapharyngeal cell" . _:68e5da a owl:Class; owl:intersectionOf _:68e5ea . _:68e5ea rdf:first ; rdf:rest _:68e60a . _:68e60a rdf:first _:68e5fa; rdf:rest rdf:nil . _:68e5fa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf _:68e61a; "cell which is part of the prepharyngeal region"; "Planarian_Anatomy"; "PLANA:0003118"; rdfs:label "prepharyngeal cell" . _:68e61a a owl:Class; owl:intersectionOf _:68e62a . _:68e62a rdf:first ; rdf:rest _:68e64a . _:68e64a rdf:first _:68e63a; rdf:rest rdf:nil . _:68e63a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; owl:equivalentClass _:68e65a; rdfs:subClassOf , _:68e69a; "neoblast undergoing mitotic G1 phase"; "Planarian_Anatomy"; "PLANA:0003200"; rdfs:label "G1 phase neoblast" . _:68e65a a owl:Class; owl:intersectionOf _:68e66a . _:68e66a rdf:first ; rdf:rest _:68e68a . _:68e68a rdf:first _:68e67a; rdf:rest rdf:nil . _:68e67a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68e69a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; owl:equivalentClass _:68e6aa; rdfs:subClassOf , _:68e6ea; "neoblast undergoing mitotic S phase"; "Planarian_Anatomy"; "PLANA:0003201"; rdfs:label "S phase neoblast" . _:68e6aa a owl:Class; owl:intersectionOf _:68e6ba . _:68e6ba rdf:first ; rdf:rest _:68e6da . _:68e6da rdf:first _:68e6ca; rdf:rest rdf:nil . _:68e6ca a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68e6ea a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; owl:equivalentClass _:68e6fa; rdfs:subClassOf , _:68e73a; "neoblast undergoing mitotic G2 phase"; "Planarian_Anatomy"; "PLANA:0003202"; rdfs:label "G2 phase neoblast" . _:68e6fa a owl:Class; owl:intersectionOf _:68e70a . _:68e70a rdf:first ; rdf:rest _:68e72a . _:68e72a rdf:first _:68e71a; rdf:rest rdf:nil . _:68e71a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68e73a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; owl:equivalentClass _:68e74a; rdfs:subClassOf , _:68e78a; "neoblast undergoing mitotic prophase"; ; "Planarian_Anatomy"; "PLANA:0003203"; rdfs:label "prophase neoblast" . _:68e74a a owl:Class; owl:intersectionOf _:68e75a . _:68e75a rdf:first ; rdf:rest _:68e77a . _:68e77a rdf:first _:68e76a; rdf:rest rdf:nil . _:68e76a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68e78a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68e79a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget ; rdfs:comment "Image is an electron micrograph showing a neoblast undergoing mitotic prophase (outlined). Note the difference in appearance compared to neighboring cells, nuclei labeled \"N.\" Scale bar is 2 um." . a owl:Class; owl:equivalentClass _:68e7aa; rdfs:subClassOf , _:68e7ea; "neoblast undergoing mitotic metaphase"; ; "M phase neoblast"; "Planarian_Anatomy"; "PLANA:0003204"; rdfs:label "metaphase neoblast" . _:68e7aa a owl:Class; owl:intersectionOf _:68e7ba . _:68e7ba rdf:first ; rdf:rest _:68e7da . _:68e7da rdf:first _:68e7ca; rdf:rest rdf:nil . _:68e7ca a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68e7ea a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68e7fa a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget ; rdfs:comment "Image is an electron micrograph depicting cells in the mesenchyme, near the regeneration blastema. In the middle of the image, outlined, a cell is undergoing mitotic metaphase. This cell's chromosomes can be seen in a vertical arrangement. Scale bar is 2um." . a owl:Class; owl:equivalentClass _:68e80a; rdfs:subClassOf , _:68e84a; "neoblast undergoing mitotic anaphase"; ; "Planarian_Anatomy"; "PLANA:0003205"; rdfs:label "anaphase neoblast" . _:68e80a a owl:Class; owl:intersectionOf _:68e81a . _:68e81a rdf:first ; rdf:rest _:68e83a . _:68e83a rdf:first _:68e82a; rdf:rest rdf:nil . _:68e82a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68e84a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68e85a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget ; rdfs:comment "Image is an electron micrograph showing a neoblast undergoing mitotic anaphase. The entire cell has been outlined and the condensed chromatin is visible inside. Scale bar is 2um." . a owl:Class; owl:equivalentClass _:68e86a; rdfs:subClassOf , _:68e8aa; "neoblast undergoing mitotic telophase"; ; "Planarian_Anatomy"; "PLANA:0003206"; rdfs:label "telophase neoblast" . _:68e86a a owl:Class; owl:intersectionOf _:68e87a . _:68e87a rdf:first ; rdf:rest _:68e89a . _:68e89a rdf:first _:68e88a; rdf:rest rdf:nil . _:68e88a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68e8aa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68e8ba a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget ; rdfs:comment "Image is an electron micrograph showing a neoblast undergoing mitotic telophase (outlined). The condensed chromatin is visible inside and has been partially outlined by the nuclear envelope. Scale bar is 1um." . a owl:Class; owl:equivalentClass _:68e8ca; rdfs:subClassOf , _:68e90a; "spermatogonial stem cell undergoing mitotic G1 phase"; "Planarian_Anatomy"; "PLANA:0003207"; rdfs:label "G1 phase spermatogonial stem cell" . _:68e8ca a owl:Class; owl:intersectionOf _:68e8da . _:68e8da rdf:first ; rdf:rest _:68e8fa . _:68e8fa rdf:first _:68e8ea; rdf:rest rdf:nil . _:68e8ea a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68e90a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; owl:equivalentClass _:68e91a; rdfs:subClassOf , _:68e95a; "spermatogonial stem cell undergoing mitotic S phase"; "Planarian_Anatomy"; "PLANA:0003208"; rdfs:label "S phase spermatogonial stem cell" . _:68e91a a owl:Class; owl:intersectionOf _:68e92a . _:68e92a rdf:first ; rdf:rest _:68e94a . _:68e94a rdf:first _:68e93a; rdf:rest rdf:nil . _:68e93a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68e95a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; owl:equivalentClass _:68e96a; rdfs:subClassOf , _:68e9aa; "spermatogonial stem cell undergoing mitotic G2 phase"; "Planarian_Anatomy"; "PLANA:0003209"; rdfs:label "G2 phase spermatogonial stem cell" . _:68e96a a owl:Class; owl:intersectionOf _:68e97a . _:68e97a rdf:first ; rdf:rest _:68e99a . _:68e99a rdf:first _:68e98a; rdf:rest rdf:nil . _:68e98a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68e9aa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; owl:equivalentClass _:68e9ba; rdfs:subClassOf , _:68e9fa; "spermatogonial stem cell undergoing mitotic prophase"; "Planarian_Anatomy"; "PLANA:0003210"; rdfs:label "prophase spermatogonial stem cell" . _:68e9ba a owl:Class; owl:intersectionOf _:68e9ca . _:68e9ca rdf:first ; rdf:rest _:68e9ea . _:68e9ea rdf:first _:68e9da; rdf:rest rdf:nil . _:68e9da a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68e9fa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; owl:equivalentClass _:68ea0a; rdfs:subClassOf , _:68ea4a; "spermatogonial stem cell undergoing mitotic metaphase"; "Planarian_Anatomy"; "PLANA:0003211"; rdfs:label "metaphase spermatogonial stem cell" . _:68ea0a a owl:Class; owl:intersectionOf _:68ea1a . _:68ea1a rdf:first ; rdf:rest _:68ea3a . _:68ea3a rdf:first _:68ea2a; rdf:rest rdf:nil . _:68ea2a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68ea4a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; owl:equivalentClass _:68ea5a; rdfs:subClassOf , _:68ea9a; "spermatogonial stem cell undergoing mitotic anaphase"; "Planarian_Anatomy"; "PLANA:0003212"; rdfs:label "anaphase spermatogonial stem cell" . _:68ea5a a owl:Class; owl:intersectionOf _:68ea6a . _:68ea6a rdf:first ; rdf:rest _:68ea8a . _:68ea8a rdf:first _:68ea7a; rdf:rest rdf:nil . _:68ea7a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68ea9a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; owl:equivalentClass _:68eaaa; rdfs:subClassOf , _:68eaea; "spermatogonial stem cell undergoing mitotic telophase"; "Planarian_Anatomy"; "PLANA:0003213"; rdfs:label "telophase spermatogonial stem cell" . _:68eaaa a owl:Class; owl:intersectionOf _:68eaba . _:68eaba rdf:first ; rdf:rest _:68eada . _:68eada rdf:first _:68eaca; rdf:rest rdf:nil . _:68eaca a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68eaea a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; owl:equivalentClass _:68eafa; rdfs:subClassOf , _:68eb3a; "oogonial stem cell undergoing mitotic G1 phase"; "Planarian_Anatomy"; "PLANA:0003214"; rdfs:label "G1 phase oogonial stem cell" . _:68eafa a owl:Class; owl:intersectionOf _:68eb0a . _:68eb0a rdf:first ; rdf:rest _:68eb2a . _:68eb2a rdf:first _:68eb1a; rdf:rest rdf:nil . _:68eb1a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68eb3a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; owl:equivalentClass _:68eb4a; rdfs:subClassOf , _:68eb8a; "oogonial stem cell undergoing mitotic S phase"; "Planarian_Anatomy"; "PLANA:0003215"; rdfs:label "S phase oogonial stem cell" . _:68eb4a a owl:Class; owl:intersectionOf _:68eb5a . _:68eb5a rdf:first ; rdf:rest _:68eb7a . _:68eb7a rdf:first _:68eb6a; rdf:rest rdf:nil . _:68eb6a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68eb8a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; owl:equivalentClass _:68eb9a; rdfs:subClassOf , _:68ebda; "oogonial stem cell undergoing mitotic G2 phase"; "Planarian_Anatomy"; "PLANA:0003216"; rdfs:label "G2 phase oogonial stem cell" . _:68eb9a a owl:Class; owl:intersectionOf _:68ebaa . _:68ebaa rdf:first ; rdf:rest _:68ebca . _:68ebca rdf:first _:68ebba; rdf:rest rdf:nil . _:68ebba a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68ebda a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; owl:equivalentClass _:68ebea; rdfs:subClassOf , _:68ec2a; "oogonial stem cell undergoing mitotic prophase"; "Planarian_Anatomy"; "PLANA:0003217"; rdfs:label "prophase oogonial stem cell" . _:68ebea a owl:Class; owl:intersectionOf _:68ebfa . _:68ebfa rdf:first ; rdf:rest _:68ec1a . _:68ec1a rdf:first _:68ec0a; rdf:rest rdf:nil . _:68ec0a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68ec2a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; owl:equivalentClass _:68ec3a; rdfs:subClassOf , _:68ec7a; "oogonial stem cell undergoing mitotic metaphase"; "Planarian_Anatomy"; "PLANA:0003218"; rdfs:label "metaphase oogonial stem cell" . _:68ec3a a owl:Class; owl:intersectionOf _:68ec4a . _:68ec4a rdf:first ; rdf:rest _:68ec6a . _:68ec6a rdf:first _:68ec5a; rdf:rest rdf:nil . _:68ec5a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68ec7a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; owl:equivalentClass _:68ec8a; rdfs:subClassOf , _:68ecca; "oogonial stem cell undergoing mitotic anaphase"; "Planarian_Anatomy"; "PLANA:0003219"; rdfs:label "anaphase oogonial stem cell" . _:68ec8a a owl:Class; owl:intersectionOf _:68ec9a . _:68ec9a rdf:first ; rdf:rest _:68ecba . _:68ecba rdf:first _:68ecaa; rdf:rest rdf:nil . _:68ecaa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68ecca a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; owl:equivalentClass _:68ecda; rdfs:subClassOf , _:68ed1a; "oogonial stem cell undergoing mitotic telophase"; "Planarian_Anatomy"; "PLANA:0003220"; rdfs:label "telophase oogonial stem cell" . _:68ecda a owl:Class; owl:intersectionOf _:68ecea . _:68ecea rdf:first ; rdf:rest _:68ed0a . _:68ed0a rdf:first _:68ecfa; rdf:rest rdf:nil . _:68ecfa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68ed1a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; owl:equivalentClass _:68ed2a; rdfs:subClassOf , _:68ed6a; "spermatogonium undergoing mitotic G1 phase"; "Planarian_Anatomy"; "PLANA:0003221"; rdfs:label "G1 phase spermatogonium" . _:68ed2a a owl:Class; owl:intersectionOf _:68ed3a . _:68ed3a rdf:first ; rdf:rest _:68ed5a . _:68ed5a rdf:first _:68ed4a; rdf:rest rdf:nil . _:68ed4a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68ed6a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; owl:equivalentClass _:68ed7a; rdfs:subClassOf , _:68edba; "spermatogonium undergoing mitotic S phase"; "Planarian_Anatomy"; "PLANA:0003222"; rdfs:label "S phase spermatogonium" . _:68ed7a a owl:Class; owl:intersectionOf _:68ed8a . _:68ed8a rdf:first ; rdf:rest _:68edaa . _:68edaa rdf:first _:68ed9a; rdf:rest rdf:nil . _:68ed9a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68edba a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; owl:equivalentClass _:68edca; rdfs:subClassOf , _:68ee0a; "spermatogonium undergoing mitotic G2 phase"; "Planarian_Anatomy"; "PLANA:0003223"; rdfs:label "G2 phase spermatogonium" . _:68edca a owl:Class; owl:intersectionOf _:68edda . _:68edda rdf:first ; rdf:rest _:68edfa . _:68edfa rdf:first _:68edea; rdf:rest rdf:nil . _:68edea a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68ee0a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; owl:equivalentClass _:68ee1a; rdfs:subClassOf , _:68ee5a; "spermatogonium undergoing mitotic prophase"; "Planarian_Anatomy"; "PLANA:0003224"; rdfs:label "prophase spermatogonium" . _:68ee1a a owl:Class; owl:intersectionOf _:68ee2a . _:68ee2a rdf:first ; rdf:rest _:68ee4a . _:68ee4a rdf:first _:68ee3a; rdf:rest rdf:nil . _:68ee3a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68ee5a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; owl:equivalentClass _:68ee6a; rdfs:subClassOf , _:68eeaa; "spermatogonium undergoing mitotic metaphase"; "Planarian_Anatomy"; "PLANA:0003225"; rdfs:label "metaphase spermatogonia" . _:68ee6a a owl:Class; owl:intersectionOf _:68ee7a . _:68ee7a rdf:first ; rdf:rest _:68ee9a . _:68ee9a rdf:first _:68ee8a; rdf:rest rdf:nil . _:68ee8a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68eeaa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; owl:equivalentClass _:68eeba; rdfs:subClassOf , _:68eefa; "spermatogonium undergoing mitotic anaphase"; "Planarian_Anatomy"; "PLANA:0003226"; rdfs:label "anaphase spermatogonia" . _:68eeba a owl:Class; owl:intersectionOf _:68eeca . _:68eeca rdf:first ; rdf:rest _:68eeea . _:68eeea rdf:first _:68eeda; rdf:rest rdf:nil . _:68eeda a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68eefa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; owl:equivalentClass _:68ef0a; rdfs:subClassOf , _:68ef4a; "spermatogonium undergoing mitotic telophase"; "Planarian_Anatomy"; "PLANA:0003227"; rdfs:label "telophase spermatogonium" . _:68ef0a a owl:Class; owl:intersectionOf _:68ef1a . _:68ef1a rdf:first ; rdf:rest _:68ef3a . _:68ef3a rdf:first _:68ef2a; rdf:rest rdf:nil . _:68ef2a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68ef4a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; owl:equivalentClass _:68ef5a; rdfs:subClassOf , _:68ef9a; "oogonial cell undergoing mitotic G1 phase"; "Planarian_Anatomy"; "PLANA:0003228"; rdfs:label "G1 phase oogonial cell" . _:68ef5a a owl:Class; owl:intersectionOf _:68ef6a . _:68ef6a rdf:first ; rdf:rest _:68ef8a . _:68ef8a rdf:first _:68ef7a; rdf:rest rdf:nil . _:68ef7a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68ef9a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; owl:equivalentClass _:68efaa; rdfs:subClassOf , _:68efea; "oogonial cell undergoing mitotic S phase"; "Planarian_Anatomy"; "PLANA:0003229"; rdfs:label "S phase oogonial cell" . _:68efaa a owl:Class; owl:intersectionOf _:68efba . _:68efba rdf:first ; rdf:rest _:68efda . _:68efda rdf:first _:68efca; rdf:rest rdf:nil . _:68efca a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68efea a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; owl:equivalentClass _:68effa; rdfs:subClassOf , _:68f03a; "oogonial cell undergoing mitotic G2 phase"; "Planarian_Anatomy"; "PLANA:0003230"; rdfs:label "G2 phase oogonial cell" . _:68effa a owl:Class; owl:intersectionOf _:68f00a . _:68f00a rdf:first ; rdf:rest _:68f02a . _:68f02a rdf:first _:68f01a; rdf:rest rdf:nil . _:68f01a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68f03a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; owl:equivalentClass _:68f04a; rdfs:subClassOf , _:68f08a; "oogonial cell undergoing mitotic prophase"; "Planarian_Anatomy"; "PLANA:0003231"; rdfs:label "prophase oogonial cell" . _:68f04a a owl:Class; owl:intersectionOf _:68f05a . _:68f05a rdf:first ; rdf:rest _:68f07a . _:68f07a rdf:first _:68f06a; rdf:rest rdf:nil . _:68f06a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68f08a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; owl:equivalentClass _:68f09a; rdfs:subClassOf , _:68f0da; "oogonial cell undergoing mitotic metaphase"; "Planarian_Anatomy"; "PLANA:0003232"; rdfs:label "metaphase oogonial cell" . _:68f09a a owl:Class; owl:intersectionOf _:68f0aa . _:68f0aa rdf:first ; rdf:rest _:68f0ca . _:68f0ca rdf:first _:68f0ba; rdf:rest rdf:nil . _:68f0ba a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68f0da a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; owl:equivalentClass _:68f0ea; rdfs:subClassOf , _:68f12a; "oogonial cell undergoing mitotic anaphase"; "Planarian_Anatomy"; "PLANA:0003233"; rdfs:label "anaphase oogonial cell" . _:68f0ea a owl:Class; owl:intersectionOf _:68f0fa . _:68f0fa rdf:first ; rdf:rest _:68f11a . _:68f11a rdf:first _:68f10a; rdf:rest rdf:nil . _:68f10a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68f12a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; owl:equivalentClass _:68f13a; rdfs:subClassOf , _:68f17a; "oogonial cell undergoing mitotic telophase"; "Planarian_Anatomy"; "PLANA:0003234"; rdfs:label "telophase oogonial cell" . _:68f13a a owl:Class; owl:intersectionOf _:68f14a . _:68f14a rdf:first ; rdf:rest _:68f16a . _:68f16a rdf:first _:68f15a; rdf:rest rdf:nil . _:68f15a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68f17a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; owl:equivalentClass _:68f18a; rdfs:subClassOf , _:68f1ca; "germ cell cyst undergoing mitotic G1 phase"; "Planarian_Anatomy"; "PLANA:0003235"; rdfs:label "G1 phase germ cell cyst" . _:68f18a a owl:Class; owl:intersectionOf _:68f19a . _:68f19a rdf:first ; rdf:rest _:68f1ba . _:68f1ba rdf:first _:68f1aa; rdf:rest rdf:nil . _:68f1aa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68f1ca a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; owl:equivalentClass _:68f1da; rdfs:subClassOf , _:68f21a; "germ cell cyst undergoing mitotic S phase"; "Planarian_Anatomy"; "PLANA:0003236"; rdfs:label "S phase germ cell cyst" . _:68f1da a owl:Class; owl:intersectionOf _:68f1ea . _:68f1ea rdf:first ; rdf:rest _:68f20a . _:68f20a rdf:first _:68f1fa; rdf:rest rdf:nil . _:68f1fa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68f21a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; owl:equivalentClass _:68f22a; rdfs:subClassOf , _:68f26a; "germ cell cyst undergoing mitotic G2 phase"; "Planarian_Anatomy"; "PLANA:0003237"; rdfs:label "G2 phase germ cell cyst" . _:68f22a a owl:Class; owl:intersectionOf _:68f23a . _:68f23a rdf:first ; rdf:rest _:68f25a . _:68f25a rdf:first _:68f24a; rdf:rest rdf:nil . _:68f24a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68f26a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; owl:equivalentClass _:68f27a . _:68f27a a owl:Class; owl:intersectionOf _:68f28a . _:68f28a rdf:first ; rdf:rest _:68f2aa . _:68f2aa rdf:first _:68f29a; rdf:rest rdf:nil . _:68f29a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . rdfs:subClassOf , _:68f2ba; "germ cell cyst undergoing mitotic prophase"; "Planarian_Anatomy"; "PLANA:0003238"; rdfs:label "prophase germ cell cyst" . _:68f2ba a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; owl:equivalentClass _:68f2ca; rdfs:subClassOf , _:68f30a; "germ cell cyst undergoing mitotic metaphase"; "Planarian_Anatomy"; "PLANA:0003239"; rdfs:label "metaphase germ cell cyst" . _:68f2ca a owl:Class; owl:intersectionOf _:68f2da . _:68f2da rdf:first ; rdf:rest _:68f2fa . _:68f2fa rdf:first _:68f2ea; rdf:rest rdf:nil . _:68f2ea a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68f30a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; owl:equivalentClass _:68f31a; rdfs:subClassOf , _:68f35a; "germ cell cyst undergoing mitotic anaphase"; "Planarian_Anatomy"; "PLANA:0003240"; rdfs:label "anaphase germ cell cyst" . _:68f31a a owl:Class; owl:intersectionOf _:68f32a . _:68f32a rdf:first ; rdf:rest _:68f34a . _:68f34a rdf:first _:68f33a; rdf:rest rdf:nil . _:68f33a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68f35a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; owl:equivalentClass _:68f36a; rdfs:subClassOf , _:68f3aa; "germ cell cyst undergoing mitotic telophase"; "Planarian_Anatomy"; "PLANA:0003241"; rdfs:label "telophase germ cell cyst" . _:68f36a a owl:Class; owl:intersectionOf _:68f37a . _:68f37a rdf:first ; rdf:rest _:68f39a . _:68f39a rdf:first _:68f38a; rdf:rest rdf:nil . _:68f38a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68f3aa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; owl:equivalentClass _:68f3ba; rdfs:subClassOf , _:68f3fa; "spermatocyte undergoing meiotic S phase"; "Planarian_Anatomy"; "PLANA:0003242"; rdfs:label "meiotic S phase spermatocyte" . _:68f3ba a owl:Class; owl:intersectionOf _:68f3ca . _:68f3ca rdf:first ; rdf:rest _:68f3ea . _:68f3ea rdf:first _:68f3da; rdf:rest rdf:nil . _:68f3da a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68f3fa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; owl:equivalentClass _:68f40a; rdfs:subClassOf , _:68f44a; "spermatocyte undergoing meiotic G1 phase"; "Planarian_Anatomy"; "PLANA:0003243"; rdfs:label "meiotic G1 phase spermatocyte" . _:68f40a a owl:Class; owl:intersectionOf _:68f41a . _:68f41a rdf:first ; rdf:rest _:68f43a . _:68f43a rdf:first _:68f42a; rdf:rest rdf:nil . _:68f42a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68f44a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; owl:equivalentClass _:68f45a; rdfs:subClassOf , _:68f49a; "spermatocyte undergoing meiotic G2 phase"; "Planarian_Anatomy"; "PLANA:0003244"; rdfs:label "meiotic G2 phase spermatocyte" . _:68f45a a owl:Class; owl:intersectionOf _:68f46a . _:68f46a rdf:first ; rdf:rest _:68f48a . _:68f48a rdf:first _:68f47a; rdf:rest rdf:nil . _:68f47a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68f49a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; owl:equivalentClass _:68f4aa; rdfs:subClassOf , _:68f4ea; "spermatocyte undergoing meiotic prophase I"; "Planarian_Anatomy"; "PLANA:0003245"; rdfs:label "meiotic prophase I spermatocyte" . _:68f4aa a owl:Class; owl:intersectionOf _:68f4ba . _:68f4ba rdf:first ; rdf:rest _:68f4da . _:68f4da rdf:first _:68f4ca; rdf:rest rdf:nil . _:68f4ca a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68f4ea a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; owl:equivalentClass _:68f4fa; rdfs:subClassOf , _:68f53a; "spermatocyte undergoing leptotene"; "Planarian_Anatomy"; "PLANA:0003246"; rdfs:label "leptotene stage spermatocyte" . _:68f4fa a owl:Class; owl:intersectionOf _:68f50a . _:68f50a rdf:first ; rdf:rest _:68f52a . _:68f52a rdf:first _:68f51a; rdf:rest rdf:nil . _:68f51a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68f53a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; owl:equivalentClass _:68f54a; rdfs:subClassOf , _:68f58a; "spermatocyte undergoing zygotene"; "Planarian_Anatomy"; "PLANA:0003247"; rdfs:label "zygotene stage spermatocyte" . _:68f54a a owl:Class; owl:intersectionOf _:68f55a . _:68f55a rdf:first ; rdf:rest _:68f57a . _:68f57a rdf:first _:68f56a; rdf:rest rdf:nil . _:68f56a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68f58a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68f59a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "spermatocyte undergoing zygotene"; "https://doi.org/10.1101/279364" . a owl:Class; owl:equivalentClass _:68f5aa; rdfs:subClassOf , _:68f5ea; "spermatocyte undergoing pachytene"; "Planarian_Anatomy"; "PLANA:0003248"; rdfs:label "pachytene stage spermatocyte" . _:68f5aa a owl:Class; owl:intersectionOf _:68f5ba . _:68f5ba rdf:first ; rdf:rest _:68f5da . _:68f5da rdf:first _:68f5ca; rdf:rest rdf:nil . _:68f5ca a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68f5ea a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68f5fa a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "spermatocyte undergoing pachytene"; "https://doi.org/10.1101/279364" . a owl:Class; owl:equivalentClass _:68f60a; rdfs:subClassOf , _:68f64a; "spermatocyte undergoing diplotene"; "Planarian_Anatomy"; "PLANA:0003249"; rdfs:label "diplotene stage spermatocyte" . _:68f60a a owl:Class; owl:intersectionOf _:68f61a . _:68f61a rdf:first ; rdf:rest _:68f63a . _:68f63a rdf:first _:68f62a; rdf:rest rdf:nil . _:68f62a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68f64a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; owl:equivalentClass _:68f65a; rdfs:subClassOf , _:68f69a; "spermatocyte undergoing diakinesis"; "Planarian_Anatomy"; "PLANA:0003250"; rdfs:label "diakinesis stage spermatocyte" . _:68f65a a owl:Class; owl:intersectionOf _:68f66a . _:68f66a rdf:first ; rdf:rest _:68f68a . _:68f68a rdf:first _:68f67a; rdf:rest rdf:nil . _:68f67a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68f69a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; owl:equivalentClass _:68f6aa; rdfs:subClassOf , _:68f6ea; "spermatocyte undergoing meiotic metaphase I"; "Planarian_Anatomy"; "PLANA:0003251"; rdfs:label "meiotic metaphase 1 stage spermatocyte" . _:68f6aa a owl:Class; owl:intersectionOf _:68f6ba . _:68f6ba rdf:first ; rdf:rest _:68f6da . _:68f6da rdf:first _:68f6ca; rdf:rest rdf:nil . _:68f6ca a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68f6ea a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; owl:equivalentClass _:68f6fa; rdfs:subClassOf , _:68f73a; "spermatocyte undergoing meiotic anaphase I"; "Planarian_Anatomy"; "PLANA:0003252"; rdfs:label "meiotic anaphase I stage spermatocyte" . _:68f6fa a owl:Class; owl:intersectionOf _:68f70a . _:68f70a rdf:first ; rdf:rest _:68f72a . _:68f72a rdf:first _:68f71a; rdf:rest rdf:nil . _:68f71a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68f73a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; owl:equivalentClass _:68f74a; rdfs:subClassOf , _:68f78a; "spermatocyte undergoing meiotic telophase I"; "Planarian_Anatomy"; "PLANA:0003253"; rdfs:label "meiotic telophase I spermatocyte" . _:68f74a a owl:Class; owl:intersectionOf _:68f75a . _:68f75a rdf:first ; rdf:rest _:68f77a . _:68f77a rdf:first _:68f76a; rdf:rest rdf:nil . _:68f76a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68f78a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; owl:equivalentClass _:68f79a; rdfs:subClassOf , _:68f7da; "spermatocyte undergoing meiosis II cell cycle phase"; "Planarian_Anatomy"; "PLANA:0003254"; rdfs:label "meiosis II stage spermatocyte" . _:68f79a a owl:Class; owl:intersectionOf _:68f7aa . _:68f7aa rdf:first ; rdf:rest _:68f7ca . _:68f7ca rdf:first _:68f7ba; rdf:rest rdf:nil . _:68f7ba a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68f7da a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; owl:equivalentClass _:68f7ea; rdfs:subClassOf , _:68f82a; "spermatocyte undergoing meiotic prophase II"; "Planarian_Anatomy"; "PLANA:0003255"; rdfs:label "meiotic prophase II spermatocyte" . _:68f7ea a owl:Class; owl:intersectionOf _:68f7fa . _:68f7fa rdf:first ; rdf:rest _:68f81a . _:68f81a rdf:first _:68f80a; rdf:rest rdf:nil . _:68f80a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68f82a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; owl:equivalentClass _:68f83a; rdfs:subClassOf , _:68f87a; "spermatocyte undergoing meiotic metaphase II"; "Planarian_Anatomy"; "PLANA:0003256"; rdfs:label "meiotic metaphase 2 spermatocyte" . _:68f83a a owl:Class; owl:intersectionOf _:68f84a . _:68f84a rdf:first ; rdf:rest _:68f86a . _:68f86a rdf:first _:68f85a; rdf:rest rdf:nil . _:68f85a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68f87a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; owl:equivalentClass _:68f88a; rdfs:subClassOf , _:68f8ca; "spermatocyte undergoing meiotic anaphase II"; "Planarian_Anatomy"; "PLANA:0003257"; rdfs:label "meiotic anaphase II spermatocyte" . _:68f88a a owl:Class; owl:intersectionOf _:68f89a . _:68f89a rdf:first ; rdf:rest _:68f8ba . _:68f8ba rdf:first _:68f8aa; rdf:rest rdf:nil . _:68f8aa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68f8ca a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; owl:equivalentClass _:68f8da; rdfs:subClassOf , _:68f91a; "spermatocyte undergoing meiotic telophase II"; "Planarian_Anatomy"; "PLANA:0003258"; rdfs:label "meiotic telophase II spermatocyte" . _:68f8da a owl:Class; owl:intersectionOf _:68f8ea . _:68f8ea rdf:first ; rdf:rest _:68f90a . _:68f90a rdf:first _:68f8fa; rdf:rest rdf:nil . _:68f8fa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68f91a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; owl:equivalentClass _:68f92a; rdfs:subClassOf , , _:68f96a; "This primordium develops into cephalic ganglia"; "PMID:16033796", "PMID:17553481", "PMID:17905225", "PMID:19174194", "PMID:21806978", "PMID:22339734", "PMID:23318635", "PMID:25772472", "PMID:26525673"; "brain primordia", "brain primordium", "brain primoridia", "brain rudiment", "cephalic ganglia primordia", "cephalic ganglia primordium"; "Planarian_Anatomy"; "PLANA:0003300"; rdfs:label "cephalic ganglia primordium" . _:68f92a a owl:Class; owl:intersectionOf _:68f93a . _:68f93a rdf:first ; rdf:rest _:68f95a . _:68f95a rdf:first _:68f94a; rdf:rest rdf:nil . _:68f94a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68f96a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; owl:equivalentClass _:68f97a; rdfs:subClassOf , , _:68f9ba; "This primordium develops into eye"; "PMID:22884275"; "eye aggregate"; "Planarian_Anatomy"; "PLANA:0003301"; rdfs:label "eye primordium" . _:68f97a a owl:Class; owl:intersectionOf _:68f98a . _:68f98a rdf:first ; rdf:rest _:68f9aa . _:68f9aa rdf:first _:68f99a; rdf:rest rdf:nil . _:68f99a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68f9ba a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; owl:equivalentClass _:68f9ca; rdfs:subClassOf , , _:68fa0a; "This primordium develops into pharynx"; "PMID:18202849", "PMID:21282632", "PMID:25254346", "PMID:26556349", "PMID:27074666"; "Planarian_Anatomy"; "PLANA:0003302"; rdfs:label "pharynx primordium" . _:68f9ca a owl:Class; owl:intersectionOf _:68f9da . _:68f9da rdf:first ; rdf:rest _:68f9fa . _:68f9fa rdf:first _:68f9ea; rdf:rest rdf:nil . _:68f9ea a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68fa0a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; owl:equivalentClass _:68fa1a; rdfs:subClassOf , , _:68fa5a; "This primordium develops into optic cup"; "PMID:21852957"; "optic cup primordium"; "Planarian_Anatomy"; "PLANA:0003303"; rdfs:label "pigment cup primordium" . _:68fa1a a owl:Class; owl:intersectionOf _:68fa2a . _:68fa2a rdf:first ; rdf:rest _:68fa4a . _:68fa4a rdf:first _:68fa3a; rdf:rest rdf:nil . _:68fa3a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68fa5a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; owl:equivalentClass _:68fa6a; rdfs:subClassOf , _:68faaa; "This primordium develops into testis"; "PMID:23652002"; "Planarian_Anatomy"; "PLANA:0003304"; rdfs:label "testis primordium" . _:68fa6a a owl:Class; owl:intersectionOf _:68fa7a . _:68fa7a rdf:first ; rdf:rest _:68fa9a . _:68fa9a rdf:first _:68fa8a; rdf:rest rdf:nil . _:68fa8a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68faaa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; owl:equivalentClass _:68faba; rdfs:subClassOf , , _:68fafa; "This primordium develops into gonad"; "Planarian_Anatomy"; "PLANA:0003305"; rdfs:label "gonad primoridium" . _:68faba a owl:Class; owl:intersectionOf _:68faca . _:68faca rdf:first ; rdf:rest _:68faea . _:68faea rdf:first _:68fada; rdf:rest rdf:nil . _:68fada a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68fafa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; owl:equivalentClass _:68fb0a; rdfs:subClassOf , _:68fb4a; "This primordium develops into ovary"; "Planarian_Anatomy"; "PLANA:0003306"; rdfs:label "ovary primordium" . _:68fb0a a owl:Class; owl:intersectionOf _:68fb1a . _:68fb1a rdf:first ; rdf:rest _:68fb3a . _:68fb3a rdf:first _:68fb2a; rdf:rest rdf:nil . _:68fb2a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68fb4a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; owl:equivalentClass _:68fb5a; rdfs:subClassOf , , _:68fb9a; "lumen which is part of the protonephridia"; "Planarian_Anatomy"; "PLANA:0003400"; rdfs:label "protonephridial lumen" . _:68fb5a a owl:Class; owl:intersectionOf _:68fb6a . _:68fb6a rdf:first ; rdf:rest _:68fb8a . _:68fb8a rdf:first _:68fb7a; rdf:rest rdf:nil . _:68fb7a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68fb9a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68fbaa a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "lumen which is part of the protonephridia"; "PMID:26057828" . a owl:Class; owl:equivalentClass _:68fbba; rdfs:subClassOf , , _:68fbfa; "lumen which is part of the testis"; "Planarian_Anatomy"; "PLANA:0003401"; rdfs:label "testis lumen" . _:68fbba a owl:Class; owl:intersectionOf _:68fbca . _:68fbca rdf:first ; rdf:rest _:68fbea . _:68fbea rdf:first _:68fbda; rdf:rest rdf:nil . _:68fbda a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68fbfa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68fc0a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "lumen which is part of the testis"; "PMID:17390146" . a owl:Class; owl:equivalentClass _:68fc1a; rdfs:subClassOf , , _:68fc5a; "lumen which is part of the ovary"; "Planarian_Anatomy"; "PLANA:0003402"; rdfs:label "ovary lumen" . _:68fc1a a owl:Class; owl:intersectionOf _:68fc2a . _:68fc2a rdf:first ; rdf:rest _:68fc4a . _:68fc4a rdf:first _:68fc3a; rdf:rest rdf:nil . _:68fc3a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68fc5a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68fc6a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "lumen which is part of the ovary"; "PMID:19247960" . a owl:Class; owl:equivalentClass _:68fc7a; rdfs:subClassOf , _:68fcba; "lumen which is part of the flame cell"; "flame cell barrel lumen"; "Planarian_Anatomy"; "PLANA:0003403"; rdfs:label "flame cell lumen" . _:68fc7a a owl:Class; owl:intersectionOf _:68fc8a . _:68fc8a rdf:first ; rdf:rest _:68fcaa . _:68fcaa rdf:first _:68fc9a; rdf:rest rdf:nil . _:68fc9a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68fcba a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68fcca a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "lumen which is part of the flame cell"; "PMID:21828097" . a owl:Class; owl:equivalentClass _:68fcda; rdfs:subClassOf , , _:68fd1a; "A progenitor cell that gives rise to one or more of the cell type(s) in the nervous system."; "brain progenitor", "brain progentitor cell"; "Planarian_Anatomy"; rdfs:label "cephalic ganglia progenitor cell" . _:68fcda a owl:Class; owl:intersectionOf _:68fcea . _:68fcea rdf:first ; rdf:rest _:68fd0a . _:68fd0a rdf:first _:68fcfa; rdf:rest rdf:nil . _:68fcfa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68fd1a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68fd2a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "A progenitor cell that gives rise to one or more of the cell type(s) in the nervous system."; "PMID:26525673" . a owl:Class; owl:equivalentClass _:68fd3a; rdfs:subClassOf , , _:68fd7a; "A progenitor cell that gives rise to one or more of the cell type(s) in the dorsal epidermis."; "Planarian_Anatomy"; rdfs:label "dorsal epidermis progenitor cell" . _:68fd3a a owl:Class; owl:intersectionOf _:68fd4a . _:68fd4a rdf:first ; rdf:rest _:68fd6a . _:68fd6a rdf:first _:68fd5a; rdf:rest rdf:nil . _:68fd5a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68fd7a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68fd8a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "A progenitor cell that gives rise to one or more of the cell type(s) in the dorsal epidermis."; "PMID:28292427" . a owl:Class; owl:equivalentClass _:68fd9a; rdfs:subClassOf , , _:68fdda; "A progenitor cell that gives rise to optic cup cells of the eye."; "optic cup trail cell"; "Planarian_Anatomy"; rdfs:label "optic cup progenitor cell" . _:68fd9a a owl:Class; owl:intersectionOf _:68fdaa . _:68fdaa rdf:first ; rdf:rest _:68fdca . _:68fdca rdf:first _:68fdba; rdf:rest rdf:nil . _:68fdba a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68fdda a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68fdea a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "A progenitor cell that gives rise to optic cup cells of the eye."; "PMID:21852957" . a owl:Class; owl:equivalentClass _:68fdfa; rdfs:subClassOf , , _:68fe3a; "A progenitor cell that gives rise to one or more of the cell type(s) in the epidermis."; "Planarian_Anatomy"; "PLANA:0003503"; rdfs:label "ventral epidermis progenitor cell" . _:68fdfa a owl:Class; owl:intersectionOf _:68fe0a . _:68fe0a rdf:first ; rdf:rest _:68fe2a . _:68fe2a rdf:first _:68fe1a; rdf:rest rdf:nil . _:68fe1a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68fe3a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68fe4a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "A progenitor cell that gives rise to one or more of the cell type(s) in the epidermis."; "PMID:28292427" . a owl:Class; owl:equivalentClass _:68fe5a; rdfs:subClassOf , , _:68fe9a; "This progenitor cell develops into testis somatic gonadal cell"; "Planarian_Anatomy"; "PLANA:0003504"; rdfs:label "testis somatic gonadal cell progenitor cell" . _:68fe5a a owl:Class; owl:intersectionOf _:68fe6a . _:68fe6a rdf:first ; rdf:rest _:68fe8a . _:68fe8a rdf:first _:68fe7a; rdf:rest rdf:nil . _:68fe7a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68fe9a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68feaa a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "This progenitor cell develops into testis somatic gonadal cell"; "PMID: 23652002" . a owl:Class; owl:equivalentClass _:68feba; rdfs:subClassOf , _:68fefa; "A fragment derived from a prepharyngeal amputation encompassing the head."; ; "head piece"; "Planarian_Anatomy"; "PLANA:0003600"; rdfs:label "head fragment" . _:68feba a owl:Class; owl:intersectionOf _:68feca . _:68feca rdf:first ; rdf:rest _:68feea . _:68feea rdf:first _:68feda; rdf:rest rdf:nil . _:68feda a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68fefa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68ff0a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget ; rdfs:comment "A fragment derived from a prepharyngeal amputation encompassing the head." . a owl:Class; owl:equivalentClass _:68ff1a; rdfs:subClassOf , _:68ff5a; "A fragment derived from pre- and post-pharyngeal amputations, encompassing the pharynx and parapharyngeal region."; ; "trunk piece"; "Planarian_Anatomy"; "PLANA:0003601"; rdfs:label "trunk fragment" . _:68ff1a a owl:Class; owl:intersectionOf _:68ff2a . _:68ff2a rdf:first ; rdf:rest _:68ff4a . _:68ff4a rdf:first _:68ff3a; rdf:rest rdf:nil . _:68ff3a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68ff5a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68ff6a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget ; rdfs:comment "Illustration of a trunk fragment (in green)." . a owl:Class; owl:equivalentClass _:68ff7a; rdfs:subClassOf , _:68ffba; "A fragment derived from a postpharyngeal amputation encompassing the tail."; ; "tail piece"; "Planarian_Anatomy"; "PLANA:0003602"; rdfs:label "tail fragment" . _:68ff7a a owl:Class; owl:intersectionOf _:68ff8a . _:68ff8a rdf:first ; rdf:rest _:68ffaa . _:68ffaa rdf:first _:68ff9a; rdf:rest rdf:nil . _:68ff9a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68ffba a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:68ffca a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget ; rdfs:comment "A fragment derived from a postpharyngeal amputation encompassing the tail." . a owl:Class; owl:equivalentClass _:68ffda; rdfs:subClassOf , _:69001a; "A fragment derived from two prepharyngeal amputations, removing the head and posterior regions of the animal."; ; "neck fragment", "neck piece"; "Planarian_Anatomy"; "PLANA:0003603"; rdfs:label "prepharyngeal fragment" . _:68ffda a owl:Class; owl:intersectionOf _:68ffea . _:68ffea rdf:first ; rdf:rest _:69000a . _:69000a rdf:first _:68fffa; rdf:rest rdf:nil . _:68fffa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69001a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69002a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget ; rdfs:comment "Illustration of a prepharyngeal fragment (in green)." . a owl:Class; owl:equivalentClass _:69003a; rdfs:subClassOf , _:69007a; "A fragment derived from two postpharyngeal amputations, removing the anterior region and the tail tip."; ; "post-pharyngeal fragment", "post-pharyngeal piece", "postpharyngeal piece"; "Planarian_Anatomy"; "PLANA:0003604"; rdfs:label "postpharyngeal fragment" . _:69003a a owl:Class; owl:intersectionOf _:69004a . _:69004a rdf:first ; rdf:rest _:69006a . _:69006a rdf:first _:69005a; rdf:rest rdf:nil . _:69005a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69007a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69008a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget ; rdfs:comment "Illustration of a postpharyngeal fragment (in green)." . a owl:Class; owl:equivalentClass _:69009a; rdfs:subClassOf , _:6900da; "A fragment encompassing all or part of the anterior region of the animal."; ; "Planarian_Anatomy"; "PLANA:0003605"; rdfs:label "anterior fragment" . _:69009a a owl:Class; owl:intersectionOf _:6900aa . _:6900aa rdf:first ; rdf:rest _:6900ca . _:6900ca rdf:first _:6900ba; rdf:rest rdf:nil . _:6900ba a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6900da a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6900ea a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget ; rdfs:comment "A fragment encompassing all or part of the anterior region of the animal." . a owl:Class; owl:equivalentClass _:6900fa . _:6900fa a owl:Class; owl:intersectionOf _:69010a . _:69010a rdf:first ; rdf:rest _:69012a . _:69012a rdf:first _:69011a . _:69011a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69012a rdf:rest rdf:nil . rdfs:subClassOf , _:69013a; "A fragment encompassing all or part of the posterior region of the animal."; ; "Planarian_Anatomy"; "PLANA:0003606"; rdfs:label "posterior fragment" . _:69013a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69014a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget ; rdfs:comment "Illustration of an example of a posterior fragment (in green)." . a owl:Class; owl:equivalentClass _:69015a; rdfs:subClassOf , _:69019a; "A fragment derived from an amputation parallel to or along any edge, which overlaps the lateral region, dorso-lateral region, ventro-lateral region, antero-lateral margin, lateral margin, ventro-lateral margin, postero-lateral margin, dorso-lateral margin, antero-lateral region, postero-lateral region. [SMR: a fragment that encompasses the side of the animal, not necessarily longituduinal, or parallel to the midline]"; ; "edge fragment", "longitudinal fragment", "sagittal fragment", "side fragment"; "Planarian_Anatomy"; "PLANA:0003607"; rdfs:label "lateral fragment" . _:69015a a owl:Class; owl:intersectionOf _:69016a . _:69016a rdf:first ; rdf:rest _:69018a . _:69018a rdf:first _:69017a; rdf:rest rdf:nil . _:69017a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69019a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6901aa a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget ; rdfs:comment "http://purl.obolibrary.org/obo/A fragment derived from an amputation parallel to or along any edge, which overlaps the lateral region, dorso-lateral region, ventro-lateral region, antero-lateral margin, lateral margin, ventro-lateral margin, postero-lateral margin, dorso-lateral margin, antero-lateral region, postero-lateral region. [SMR_ a fragment that encompasses the side of the animal, not necessarily longituduinal, or parallel to the midline]" . a owl:Class; owl:equivalentClass _:6901ba; rdfs:subClassOf , _:6901fa; "a fragment derived from an amputation parallel to the midline."; ; "Planarian_Anatomy"; "PLANA:0003608"; rdfs:label "longitudinal fragment" . _:6901ba a owl:Class; owl:intersectionOf _:6901ca . _:6901ca rdf:first ; rdf:rest _:6901ea . _:6901ea rdf:first _:6901da; rdf:rest rdf:nil . _:6901da a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6901fa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69020a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget ; rdfs:comment "a fragment derived from an amputation parallel to the midline." . a owl:Class; owl:equivalentClass _:69021a; rdfs:subClassOf , _:69025a; "A 3D piece of tissue, usually though the whole depth of the animal encompassing both dorsal and ventral sides, often made with a biopsy punch."; ; "Planarian_Anatomy"; "PLANA:0003609"; rdfs:label "plug fragment" . _:69021a a owl:Class; owl:intersectionOf _:69022a . _:69022a rdf:first ; rdf:rest _:69024a . _:69024a rdf:first _:69023a; rdf:rest rdf:nil . _:69023a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69025a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69026a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget ; rdfs:comment "Illustration of an example plug fragment in green." . a owl:Class; owl:equivalentClass _:69027a; rdfs:subClassOf , _:6902ba; "A piece of tissue removed from the lateral margin at any given point that extendes interiorly to more medial structures."; ; "Planarian_Anatomy"; "PLANA:0003610"; rdfs:label "wedge fragment" . _:69027a a owl:Class; owl:intersectionOf _:69028a . _:69028a rdf:first ; rdf:rest _:6902aa . _:6902aa rdf:first _:69029a; rdf:rest rdf:nil . _:69029a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6902ba a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6902ca a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget ; rdfs:comment "Illustration of an example wedge fragment in green." . a owl:Class; owl:equivalentClass _:6902da; rdfs:subClassOf , _:69032a, _:69033a; "The dorsal region of a fragment derived from a prepharyngeal amputation encompassing the head."; ; "dorsal region of head fragment"; "Planarian_Anatomy"; rdfs:label "dorsal region of head fragment" . _:6902da a owl:Class; owl:intersectionOf _:6902fa . _:6902fa rdf:first _:6902ea; rdf:rest _:69031a . _:6902ea a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69031a rdf:first _:69030a; rdf:rest rdf:nil . _:69030a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69032a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69033a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69034a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget ; rdfs:comment "Illustration of the dorsal region of a head fragment (green)." . a owl:Class; owl:equivalentClass _:69035a; rdfs:subClassOf , _:6903aa, _:6903ba; "The ventral region of a fragment derived from a prepharyngeal amputation encompassing the head."; ; "ventral region of head fragment"; "Planarian_Anatomy"; rdfs:label "ventral region of head fragment" . _:69035a a owl:Class; owl:intersectionOf _:69037a . _:69037a rdf:first _:69036a; rdf:rest _:69039a . _:69036a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69039a rdf:first _:69038a; rdf:rest rdf:nil . _:69038a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6903aa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6903ba a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6903ca a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget ; rdfs:comment "Illustration of the ventral region of a head fragment (green)." . a owl:Class; owl:equivalentClass _:6903da; rdfs:subClassOf , _:69042a, _:69043a; "The anterior region of a fragment derived from a prepharyngeal amputation encompassing the head."; ; "anterior region of head fragment"; "Planarian_Anatomy"; rdfs:label "anterior region of head fragment" . _:6903da a owl:Class; owl:intersectionOf _:6903fa . _:6903fa rdf:first _:6903ea; rdf:rest _:69041a . _:6903ea a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69041a rdf:first _:69040a; rdf:rest rdf:nil . _:69040a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69042a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69043a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69044a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget ; rdfs:comment "Illustration of the anterior region of a head fragment (green)." . a owl:Class; owl:equivalentClass _:69045a; rdfs:subClassOf , _:6904aa, _:6904ba; "The posterior region of a fragment derived from a prepharyngeal amputation encompassing the head."; ; "posterior region of head fragment"; "Planarian_Anatomy"; rdfs:label "posterior region of head fragment" . _:69045a a owl:Class; owl:intersectionOf _:69047a . _:69047a rdf:first _:69046a; rdf:rest _:69049a . _:69046a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69049a rdf:first _:69048a; rdf:rest rdf:nil . _:69048a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6904aa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6904ba a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6904ca a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget ; rdfs:comment "Illustration of the posterior region of a head fragment (green)." . a owl:Class; owl:equivalentClass _:6904da; rdfs:subClassOf , _:69052a, _:69053a; "The dorsal region of a fragment derived from pre- and post-pharyngeal amputations, encompassing the pharynx and parapharyngeal region."; ; "dorsal region of trunk fragment"; "Planarian_Anatomy"; rdfs:label "dorsal region of trunk fragment" . _:6904da a owl:Class; owl:intersectionOf _:6904fa . _:6904fa rdf:first _:6904ea; rdf:rest _:69051a . _:6904ea a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69051a rdf:first _:69050a; rdf:rest rdf:nil . _:69050a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69052a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69053a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69054a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget ; rdfs:comment "Illustration of the dorsal region of a trunk fragment (green)." . a owl:Class; owl:equivalentClass _:69055a; rdfs:subClassOf , _:6905aa, _:6905ba; "The ventral region of a fragment derived from pre- and post-pharyngeal amputations, encompassing the pharynx and parapharyngeal region."; ; "ventral region of trunk fragment"; "Planarian_Anatomy"; rdfs:label "ventral region of trunk fragment" . _:69055a a owl:Class; owl:intersectionOf _:69057a . _:69057a rdf:first _:69056a; rdf:rest _:69059a . _:69056a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69059a rdf:first _:69058a; rdf:rest rdf:nil . _:69058a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6905aa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6905ba a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6905ca a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget ; rdfs:comment "Illustration of the ventral region of a trunk fragment (green)." . a owl:Class; owl:equivalentClass _:6905da; rdfs:subClassOf , _:69062a, _:69063a; "The anterior region of a fragment derived from pre- and post-pharyngeal amputations, encompassing the pharynx and parapharyngeal region."; ; "anterior region of trunk fragment"; "Planarian_Anatomy"; rdfs:label "anterior region of trunk fragment" . _:6905da a owl:Class; owl:intersectionOf _:6905fa . _:6905fa rdf:first _:6905ea; rdf:rest _:69061a . _:6905ea a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69061a rdf:first _:69060a; rdf:rest rdf:nil . _:69060a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69062a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69063a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69064a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget ; rdfs:comment "Illustration of the anterior region of a trunk fragment (green)." . a owl:Class; owl:equivalentClass _:69065a; rdfs:subClassOf , _:6906aa, _:6906ba; "The posterior region of a fragment derived from pre- and post-pharyngeal amputations, encompassing the pharynx and parapharyngeal region."; ; "posterior region of trunk fragment"; "Planarian_Anatomy"; rdfs:label "posterior region of trunk fragment" . _:69065a a owl:Class; owl:intersectionOf _:69067a . _:69067a rdf:first _:69066a; rdf:rest _:69069a . _:69066a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69069a rdf:first _:69068a; rdf:rest rdf:nil . _:69068a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6906aa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6906ba a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6906ca a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget ; rdfs:comment "Illustration of the posterior region of a trunk fragment (green)." . a owl:Class; owl:equivalentClass _:6906da; rdfs:subClassOf , _:69072a, _:69073a; "The dorsal region of a fragment derived from a postpharyngeal amputation encompassing the tail."; ; "dorsal region of tail fragment"; "Planarian_Anatomy"; rdfs:label "dorsal region of tail fragment" . _:6906da a owl:Class; owl:intersectionOf _:6906fa . _:6906fa rdf:first _:6906ea; rdf:rest _:69071a . _:6906ea a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69071a rdf:first _:69070a; rdf:rest rdf:nil . _:69070a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69072a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69073a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69074a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget ; rdfs:comment "Illustration of the dorsal region of a tail fragment (green)." . a owl:Class; owl:equivalentClass _:69075a; rdfs:subClassOf , _:6907aa, _:6907ba; "The ventral region of a fragment derived from a postpharyngeal amputation encompassing the tail."; ; "ventral region of tail fragment"; "Planarian_Anatomy"; rdfs:label "ventral region of tail fragment" . _:69075a a owl:Class; owl:intersectionOf _:69077a . _:69077a rdf:first _:69076a; rdf:rest _:69079a . _:69076a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69079a rdf:first _:69078a; rdf:rest rdf:nil . _:69078a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6907aa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6907ba a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6907ca a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget ; rdfs:comment "Illustration of the ventral region of a tail fragment (green)." . a owl:Class; owl:equivalentClass _:6907da; rdfs:subClassOf , _:69082a, _:69083a; "The anterior region of a fragment derived from a postpharyngeal amputation encompassing the tail."; ; "anterior region of tail fragment"; "Planarian_Anatomy"; rdfs:label "anterior region of tail fragment" . _:6907da a owl:Class; owl:intersectionOf _:6907fa . _:6907fa rdf:first _:6907ea; rdf:rest _:69081a . _:6907ea a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69081a rdf:first _:69080a; rdf:rest rdf:nil . _:69080a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69082a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69083a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69084a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget ; rdfs:comment "Illustration of the anterior region of a tail fragment (green)." . a owl:Class; owl:equivalentClass _:69085a; rdfs:subClassOf , _:6908aa, _:6908ba; "The posterior region of a fragment derived from a postpharyngeal amputation encompassing the tail."; ; "posterior region of tail fragment"; "Planarian_Anatomy"; rdfs:label "posterior region of tail fragment" . _:69085a a owl:Class; owl:intersectionOf _:69087a . _:69087a rdf:first _:69086a; rdf:rest _:69089a . _:69086a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69089a rdf:first _:69088a; rdf:rest rdf:nil . _:69088a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6908aa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6908ba a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6908ca a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget ; rdfs:comment "Illustration of the posterior region of a tail fragment (green)." . a owl:Class; owl:equivalentClass _:6908da; rdfs:subClassOf , _:69092a, _:69093a; "The dorsal region of a fragment derived from two prepharyngeal amputations, removing the head and posterior regions of the animal."; ; "dorsal region of prepharyngeal fragment"; "Planarian_Anatomy"; rdfs:label "dorsal region of prepharyngeal fragment" . _:6908da a owl:Class; owl:intersectionOf _:6908fa . _:6908fa rdf:first _:6908ea; rdf:rest _:69091a . _:6908ea a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69091a rdf:first _:69090a; rdf:rest rdf:nil . _:69090a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69092a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69093a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69094a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget ; rdfs:comment "Illustration of the dorsal region of a prepharyngeal fragment (green)." . a owl:Class; owl:equivalentClass _:69095a; rdfs:subClassOf , _:6909aa, _:6909ba; "The ventral region of a fragment derived from two prepharyngeal amputations, removing the head and posterior regions of the animal."; ; "ventral region of prepharyngeal fragment"; "Planarian_Anatomy"; rdfs:label "ventral region of prepharyngeal fragment" . _:69095a a owl:Class; owl:intersectionOf _:69097a . _:69097a rdf:first _:69096a; rdf:rest _:69099a . _:69096a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69099a rdf:first _:69098a; rdf:rest rdf:nil . _:69098a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6909aa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6909ba a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6909ca a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget ; rdfs:comment "Illustration of the ventral region of a prepharyngeal fragment (green)." . a owl:Class; owl:equivalentClass _:6909da; rdfs:subClassOf , _:690a2a, _:690a3a; "The anterior region of a fragment derived from two prepharyngeal amputations, removing the head and posterior regions of the animal."; ; "anterior region of prepharyngeal fragment"; "Planarian_Anatomy"; rdfs:label "anterior region of prepharyngeal fragment" . _:6909da a owl:Class; owl:intersectionOf _:6909fa . _:6909fa rdf:first _:6909ea; rdf:rest _:690a1a . _:6909ea a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:690a1a rdf:first _:690a0a; rdf:rest rdf:nil . _:690a0a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:690a2a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:690a3a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:690a4a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget ; rdfs:comment "Illustration of the anterior region of a prepharyngeal fragment (green)." . a owl:Class; owl:equivalentClass _:690a5a; rdfs:subClassOf , _:690aaa, _:690aba; "The posterior region of a fragment derived from two prepharyngeal amputations, removing the head and posterior regions of the animal."; ; "posterior region of prepharyngeal fragment"; "Planarian_Anatomy"; rdfs:label "posterior region of prepharyngeal fragment" . _:690a5a a owl:Class; owl:intersectionOf _:690a7a . _:690a7a rdf:first _:690a6a; rdf:rest _:690a9a . _:690a6a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:690a9a rdf:first _:690a8a; rdf:rest rdf:nil . _:690a8a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:690aaa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:690aba a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:690aca a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget ; rdfs:comment "Illustration of the posterior region of a prepharyngeal fragment (green)." . a owl:Class; owl:equivalentClass _:690ada; rdfs:subClassOf , _:690b2a, _:690b3a; "The dorsal region of a fragment derived from two postpharyngeal amputations, removing the anterior region and the tail tip."; ; "dorsal region of postpharyngeal fragment"; "Planarian_Anatomy"; rdfs:label "dorsal region of postpharyngeal fragment" . _:690ada a owl:Class; owl:intersectionOf _:690afa . _:690afa rdf:first _:690aea; rdf:rest _:690b1a . _:690aea a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:690b1a rdf:first _:690b0a; rdf:rest rdf:nil . _:690b0a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:690b2a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:690b3a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:690b4a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget ; rdfs:comment "Illustration of the dorsal region of a postpharyngeal fragment (green)." . a owl:Class; owl:equivalentClass _:690b5a; rdfs:subClassOf , _:690baa, _:690bba; "The ventral region of a fragment derived from two postpharyngeal amputations, removing the anterior region and the tail tip."; ; "ventral region of postpharyngeal fragment"; "Planarian_Anatomy"; rdfs:label "ventral region of postpharyngeal fragment" . _:690b5a a owl:Class; owl:intersectionOf _:690b7a . _:690b7a rdf:first _:690b6a; rdf:rest _:690b9a . _:690b6a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:690b9a rdf:first _:690b8a; rdf:rest rdf:nil . _:690b8a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:690baa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:690bba a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:690bca a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget ; rdfs:comment "Illustration of the ventral region of a postpharyngeal fragment (green)." . a owl:Class; owl:equivalentClass _:690bda; rdfs:subClassOf , _:690c2a, _:690c3a; "The anterior region of a fragment derived from two postpharyngeal amputations, removing the anterior region and the tail tip."; ; "anterior region of postpharyngeal fragment"; "Planarian_Anatomy"; rdfs:label "anterior region of postpharyngeal fragment" . _:690bda a owl:Class; owl:intersectionOf _:690bfa . _:690bfa rdf:first _:690bea; rdf:rest _:690c1a . _:690bea a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:690c1a rdf:first _:690c0a; rdf:rest rdf:nil . _:690c0a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:690c2a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:690c3a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:690c4a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget ; rdfs:comment "Illustration of the anterior region of a postpharyngeal fragment (green)." . a owl:Class; owl:equivalentClass _:690c5a; rdfs:subClassOf , _:690caa, _:690cba; "The posterior region of a fragment derived from two postpharyngeal amputations, removing the anterior region and the tail tip."; ; "posterior region of postpharyngeal fragment"; "Planarian_Anatomy"; rdfs:label "posterior region of postpharyngeal fragment" . _:690c5a a owl:Class; owl:intersectionOf _:690c7a . _:690c7a rdf:first _:690c6a; rdf:rest _:690c9a . _:690c6a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:690c9a rdf:first _:690c8a; rdf:rest rdf:nil . _:690c8a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:690caa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:690cba a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:690cca a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget ; rdfs:comment "Illustration of the posterior region of a postpharyngeal fragment (green)." . a owl:Class; owl:equivalentClass _:690cda; rdfs:subClassOf , _:690d2a, _:690d3a; "The dorsal region of a fragment encompassing all or part of the anterior region of the animal."; ; "dorsal region of anterior fragment"; "Planarian_Anatomy"; rdfs:label "dorsal region of anterior fragment" . _:690cda a owl:Class; owl:intersectionOf _:690cfa . _:690cfa rdf:first _:690cea; rdf:rest _:690d1a . _:690cea a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:690d1a rdf:first _:690d0a; rdf:rest rdf:nil . _:690d0a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:690d2a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:690d3a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:690d4a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget ; rdfs:comment "Illustration of the dorsal region of an anterior fragment (green)." . a owl:Class; owl:equivalentClass _:690d5a; rdfs:subClassOf , _:690daa, _:690dba; "The ventral region of a fragment encompassing all or part of the anterior region of the animal."; ; "ventral region of anterior fragment"; "Planarian_Anatomy"; rdfs:label "ventral region of anterior fragment" . _:690d5a a owl:Class; owl:intersectionOf _:690d7a . _:690d7a rdf:first _:690d6a; rdf:rest _:690d9a . _:690d6a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:690d9a rdf:first _:690d8a; rdf:rest rdf:nil . _:690d8a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:690daa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:690dba a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:690dca a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget ; rdfs:comment "Illustration of the ventral region of an anterior fragment (green)." . a owl:Class; owl:equivalentClass _:690dda; rdfs:subClassOf , _:690e2a, _:690e3a; "The anterior region of a fragment encompassing all or part of the anterior region of the animal."; ; "anterior region of anterior fragment"; "Planarian_Anatomy"; rdfs:label "anterior region of anterior fragment" . _:690dda a owl:Class; owl:intersectionOf _:690dfa . _:690dfa rdf:first _:690dea; rdf:rest _:690e1a . _:690dea a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:690e1a rdf:first _:690e0a; rdf:rest rdf:nil . _:690e0a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:690e2a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:690e3a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:690e4a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget ; rdfs:comment "Illustration of the anterior region of an anterior fragment (green)." . a owl:Class; owl:equivalentClass _:690e5a; rdfs:subClassOf , _:690eaa, _:690eba; "The posterior region of a fragment encompassing all or part of the anterior region of the animal."; ; "posterior region of anterior fragment"; "Planarian_Anatomy"; rdfs:label "posterior region of anterior fragment" . _:690e5a a owl:Class; owl:intersectionOf _:690e7a . _:690e7a rdf:first _:690e6a; rdf:rest _:690e9a . _:690e6a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:690e9a rdf:first _:690e8a; rdf:rest rdf:nil . _:690e8a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:690eaa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:690eba a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:690eca a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget ; rdfs:comment "Illustration of the posterior region of an anterior fragment (green)." . a owl:Class; owl:equivalentClass _:690eda; rdfs:subClassOf , _:690f2a, _:690f3a; "The dorsal region of a fragment encompassing all or part of the posterior region of the animal."; ; "dorsal region of posterior fragment"; "Planarian_Anatomy"; rdfs:label "dorsal region of posterior fragment" . _:690eda a owl:Class; owl:intersectionOf _:690efa . _:690efa rdf:first _:690eea; rdf:rest _:690f1a . _:690eea a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:690f1a rdf:first _:690f0a; rdf:rest rdf:nil . _:690f0a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:690f2a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:690f3a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:690f4a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget ; rdfs:comment "Illustration of the dorsal region of a posterior fragment (green)." . a owl:Class; owl:equivalentClass _:690f5a; rdfs:subClassOf , _:690faa, _:690fba; "The ventral region of a fragment encompassing all or part of the posterior region of the animal."; ; "ventral region of posterior fragment"; "Planarian_Anatomy"; rdfs:label "ventral region of posterior fragment" . _:690f5a a owl:Class; owl:intersectionOf _:690f7a . _:690f7a rdf:first _:690f6a; rdf:rest _:690f9a . _:690f6a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:690f9a rdf:first _:690f8a; rdf:rest rdf:nil . _:690f8a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:690faa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:690fba a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:690fca a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget ; rdfs:comment "Illustration of the ventral region of a posterior fragment (green)." . a owl:Class; owl:equivalentClass _:690fda; rdfs:subClassOf . _:690fda a owl:Class; owl:intersectionOf _:690ffa . _:690ffa rdf:first _:690fea; rdf:rest _:69101a . _:690fea a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69101a rdf:first _:69100a; rdf:rest rdf:nil . _:69100a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . rdfs:subClassOf _:69102a, _:69103a; "The anterior region of a fragment encompassing all or part of the posterior region of the animal."; ; "anterior region of posterior fragment"; "Planarian_Anatomy"; rdfs:label "anterior region of posterior fragment" . _:69102a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69103a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69104a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget ; rdfs:comment "Illustration of the anterior region of a posterior fragment (green)." . a owl:Class; owl:equivalentClass _:69105a; rdfs:subClassOf , _:6910aa, _:6910ba; "The posterior region of a fragment encompassing all or part of the posterior region of the animal."; ; "posterior region of posterior fragment"; "Planarian_Anatomy"; rdfs:label "posterior region of posterior fragment" . _:69105a a owl:Class; owl:intersectionOf _:69107a . _:69107a rdf:first _:69106a; rdf:rest _:69109a . _:69106a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69109a rdf:first _:69108a; rdf:rest rdf:nil . _:69108a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6910aa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6910ba a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6910ca a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget ; rdfs:comment "Illustration of the posterior region of a posterior fragment (green)." . a owl:Class; owl:equivalentClass _:6910da; rdfs:subClassOf , _:69112a, _:69113a; "The dorsal region of a fragment derived from an amputation parallel to or along any edge, which overlaps the lateral region, dorso-lateral region, ventro-lateral region, antero-lateral margin, lateral margin, ventro-lateral margin, postero-lateral margin, dorso-lateral margin, antero-lateral region, postero-lateral region."; ; "dorsal region of lateral fragment"; "Planarian_Anatomy"; rdfs:label "dorsal region of lateral fragment" . _:6910da a owl:Class; owl:intersectionOf _:6910fa . _:6910fa rdf:first _:6910ea; rdf:rest _:69111a . _:6910ea a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69111a rdf:first _:69110a; rdf:rest rdf:nil . _:69110a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69112a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69113a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69114a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget ; rdfs:comment "Illustration of the dorsal region of a lateral fragment (green)." . a owl:Class; owl:equivalentClass _:69115a; rdfs:subClassOf , _:6911aa, _:6911ba; "The ventral region of a fragment derived from an amputation parallel to or along any edge, which overlaps the lateral region, dorso-lateral region, ventro-lateral region, antero-lateral margin, lateral margin, ventro-lateral margin, postero-lateral margin, dorso-lateral margin, antero-lateral region, postero-lateral region."; ; "ventral region of lateral fragment"; "Planarian_Anatomy"; rdfs:label "ventral region of lateral fragment" . _:69115a a owl:Class; owl:intersectionOf _:69117a . _:69117a rdf:first _:69116a; rdf:rest _:69119a . _:69116a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69119a rdf:first _:69118a; rdf:rest rdf:nil . _:69118a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6911aa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6911ba a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6911ca a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget ; rdfs:comment "Illustration of the ventral region of a lateral fragment (green)." . a owl:Class; owl:equivalentClass _:6911da; rdfs:subClassOf , _:69122a, _:69123a; "The anterior region of a fragment derived from an amputation parallel to or along any edge, which overlaps the lateral region, dorso-lateral region, ventro-lateral region, antero-lateral margin, lateral margin, ventro-lateral margin, postero-lateral margin, dorso-lateral margin, antero-lateral region, postero-lateral region."; ; "anterior region of lateral fragment"; "Planarian_Anatomy"; rdfs:label "anterior region of lateral fragment" . _:6911da a owl:Class; owl:intersectionOf _:6911fa . _:6911fa rdf:first _:6911ea; rdf:rest _:69121a . _:6911ea a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69121a rdf:first _:69120a; rdf:rest rdf:nil . _:69120a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69122a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69123a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69124a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget ; rdfs:comment "Illustration of the anterior region of a lateral fragment (green)." . a owl:Class; owl:equivalentClass _:69125a; rdfs:subClassOf , _:6912aa, _:6912ba; "The posterior region of a fragment derived from an amputation parallel to or along any edge, which overlaps the lateral region, dorso-lateral region, ventro-lateral region, antero-lateral margin, lateral margin, ventro-lateral margin, postero-lateral margin, dorso-lateral margin, antero-lateral region, postero-lateral region."; ; "posterior region of lateral fragment"; "Planarian_Anatomy"; rdfs:label "posterior region of lateral fragment" . _:69125a a owl:Class; owl:intersectionOf _:69127a . _:69127a rdf:first _:69126a; rdf:rest _:69129a . _:69126a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69129a rdf:first _:69128a; rdf:rest rdf:nil . _:69128a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6912aa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6912ba a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6912ca a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget ; rdfs:comment "Illustration of the posterior region of a lateral fragment (green)." . a owl:Class; owl:equivalentClass _:6912da; rdfs:subClassOf , _:69132a, _:69133a; "The dorsal region of a fragment derived from an amputation parallel to the midline."; ; "dorsal region of longitudinal fragment"; "Planarian_Anatomy"; rdfs:label "dorsal region of longitudinal fragment" . _:6912da a owl:Class; owl:intersectionOf _:6912fa . _:6912fa rdf:first _:6912ea; rdf:rest _:69131a . _:6912ea a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69131a rdf:first _:69130a; rdf:rest rdf:nil . _:69130a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69132a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69133a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69134a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget ; rdfs:comment "Illustration of the dorsal region of a longitudinal fragment (green)." . a owl:Class; owl:equivalentClass _:69135a; rdfs:subClassOf , _:6913aa, _:6913ba; "The ventral region of a fragment derived from an amputation parallel to the midline."; ; "ventral region of longitudinal fragment"; "Planarian_Anatomy"; rdfs:label "ventral region of longitudinal fragment" . _:69135a a owl:Class; owl:intersectionOf _:69137a . _:69137a rdf:first _:69136a; rdf:rest _:69139a . _:69136a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69139a rdf:first _:69138a; rdf:rest rdf:nil . _:69138a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6913aa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6913ba a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6913ca a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget ; rdfs:comment "Illustration of the ventral region of a longitudinal fragment (green)." . a owl:Class; owl:equivalentClass _:6913da; rdfs:subClassOf , _:69142a, _:69143a; "The anterior region of a fragment derived from an amputation parallel to the midline."; ; "anterior region of longitudinal fragment"; "Planarian_Anatomy"; rdfs:label "anterior region of longitudinal fragment" . _:6913da a owl:Class; owl:intersectionOf _:6913fa . _:6913fa rdf:first _:6913ea; rdf:rest _:69141a . _:6913ea a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69141a rdf:first _:69140a; rdf:rest rdf:nil . _:69140a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69142a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69143a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69144a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget ; rdfs:comment "Illustration of the anterior region of a longitudinal fragment (green)." . a owl:Class; owl:equivalentClass _:69145a; rdfs:subClassOf , _:6914aa, _:6914ba; "The posterior region of a fragment derived from an amputation parallel to the midline."; ; "posterior region of longitudinal fragment"; "Planarian_Anatomy"; rdfs:label "posterior region of longitudinal fragment" . _:69145a a owl:Class; owl:intersectionOf _:69147a . _:69147a rdf:first _:69146a; rdf:rest _:69149a . _:69146a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69149a rdf:first _:69148a; rdf:rest rdf:nil . _:69148a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6914aa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6914ba a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6914ca a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget ; rdfs:comment "Illustration of the posterior region of a longitudinal fragment (green)." . a owl:Class; owl:equivalentClass _:6914da; rdfs:subClassOf , _:69152a, _:69153a; "The dorsal region of a 3D piece of tissue, usually though the whole depth of the animal encompassing both dorsal and ventral sides, often made with a biopsy punch."; ; "dorsal region of plug fragment"; "Planarian_Anatomy"; rdfs:label "dorsal region of plug fragment" . _:6914da a owl:Class; owl:intersectionOf _:6914fa . _:6914fa rdf:first _:6914ea; rdf:rest _:69151a . _:6914ea a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69151a rdf:first _:69150a; rdf:rest rdf:nil . _:69150a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69152a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69153a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69154a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget ; rdfs:comment "Illustration of the dorsal region of a plug fragment (green)." . a owl:Class; owl:equivalentClass _:69155a; rdfs:subClassOf , _:6915aa, _:6915ba; "The ventral region of a 3D piece of tissue, usually though the whole depth of the animal encompassing both dorsal and ventral sides, often made with a biopsy punch."; ; "ventral region of plug fragment"; "Planarian_Anatomy"; rdfs:label "ventral region of plug fragment" . _:69155a a owl:Class; owl:intersectionOf _:69157a . _:69157a rdf:first _:69156a; rdf:rest _:69159a . _:69156a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69159a rdf:first _:69158a; rdf:rest rdf:nil . _:69158a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6915aa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6915ba a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6915ca a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget ; rdfs:comment "Illustration of the ventral region of a plug fragment (green)." . a owl:Class; owl:equivalentClass _:6915da; rdfs:subClassOf , _:69162a, _:69163a; "The anterior region of a 3D piece of tissue, usually though the whole depth of the animal encompassing both dorsal and ventral sides, often made with a biopsy punch."; ; "anterior region of plug fragment"; "Planarian_Anatomy"; rdfs:label "anterior region of plug fragment" . _:6915da a owl:Class; owl:intersectionOf _:6915fa . _:6915fa rdf:first _:6915ea; rdf:rest _:69161a . _:6915ea a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69161a rdf:first _:69160a; rdf:rest rdf:nil . _:69160a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69162a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69163a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69164a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget ; rdfs:comment "Illustration of the anterior region of a plug fragment (green)." . a owl:Class; owl:equivalentClass _:69165a; rdfs:subClassOf , _:6916aa, _:6916ba; "The posterior region of a 3D piece of tissue, usually though the whole depth of the animal encompassing both dorsal and ventral sides, often made with a biopsy punch."; ; "posterior region of plug fragment"; "Planarian_Anatomy"; rdfs:label "posterior region of plug fragment" . _:69165a a owl:Class; owl:intersectionOf _:69167a . _:69167a rdf:first _:69166a; rdf:rest _:69169a . _:69166a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69169a rdf:first _:69168a; rdf:rest rdf:nil . _:69168a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6916aa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6916ba a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6916ca a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget ; rdfs:comment "Illustration of the posterior region of a plug fragment (green)." . a owl:Class; owl:equivalentClass _:6916da; rdfs:subClassOf , _:69172a, _:69173a; "The dorsal region of a piece of tissue removed from the lateral margin at any given point that extendes interiorly to more medial structures."; ; "dorsal region of wedge fragment"; "Planarian_Anatomy"; rdfs:label "dorsal region of wedge fragment" . _:6916da a owl:Class; owl:intersectionOf _:6916fa . _:6916fa rdf:first _:6916ea; rdf:rest _:69171a . _:6916ea a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69171a rdf:first _:69170a; rdf:rest rdf:nil . _:69170a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69172a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69173a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69174a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget ; rdfs:comment "Illustration of the dorsal region of a plug fragment (green)." . a owl:Class; owl:equivalentClass _:69175a; rdfs:subClassOf , _:6917aa, _:6917ba; "The ventral region of a piece of tissue removed from the lateral margin at any given point that extendes interiorly to more medial structures."; ; "ventral region of wedge fragment"; "Planarian_Anatomy"; rdfs:label "ventral region of wedge fragment" . _:69175a a owl:Class; owl:intersectionOf _:69177a . _:69177a rdf:first _:69176a; rdf:rest _:69179a . _:69176a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69179a rdf:first _:69178a; rdf:rest rdf:nil . _:69178a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6917aa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6917ba a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6917ca a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget ; rdfs:comment "Illustration of the ventral region of a plug fragment (green)." . a owl:Class; owl:equivalentClass _:6917da; rdfs:subClassOf , _:69182a, _:69183a; "The anterior region of a piece of tissue removed from the lateral margin at any given point that extendes interiorly to more medial structures."; ; "anterior region of wedge fragment"; "Planarian_Anatomy"; rdfs:label "anterior region of wedge fragment" . _:6917da a owl:Class; owl:intersectionOf _:6917fa . _:6917fa rdf:first _:6917ea; rdf:rest _:69181a . _:6917ea a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69181a rdf:first _:69180a; rdf:rest rdf:nil . _:69180a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69182a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69183a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69184a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget ; rdfs:comment "Illustration of the anterior region of a wedge fragment (green)." . a owl:Class; owl:equivalentClass _:69185a; rdfs:subClassOf , _:6918aa, _:6918ba; "The posterior region of a piece of tissue removed from the lateral margin at any given point that extendes interiorly to more medial structures."; ; "posterior region of wedge fragment"; "Planarian_Anatomy"; rdfs:label "posterior region of wedge fragment" . _:69185a a owl:Class; owl:intersectionOf _:69187a . _:69187a rdf:first _:69186a; rdf:rest _:69189a . _:69186a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69189a rdf:first _:69188a; rdf:rest rdf:nil . _:69188a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6918aa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6918ba a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6918ca a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget ; rdfs:comment "Illustration of the posterior region of a wedge fragment (green)." . a owl:Class; owl:equivalentClass _:6918da; rdfs:subClassOf , _:69191a; "photoreceptor neuron is contained in the anterior region of the eye"; "photoreceptor neuron contained in anterior region of the eye"; "Planarian_Anatomy"; rdfs:label "anterior photoreceptor neuron" . _:6918da a owl:Class; owl:intersectionOf _:6918ea . _:6918ea rdf:first ; rdf:rest _:69190a . _:69190a rdf:first _:6918fa; rdf:rest rdf:nil . _:6918fa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69191a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69192a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "photoreceptor neuron is contained in the anterior region of the eye"; "PMID: 20967238" . a owl:Class; owl:equivalentClass _:69193a; rdfs:subClassOf , _:69197a; "photoreceptor neuron is contained in the posterior region of the eye"; "photoreceptor neuron contained in posterior region of the eye"; "Planarian_Anatomy"; rdfs:label "posterior photoreceptor neuron" . _:69193a a owl:Class; owl:intersectionOf _:69194a . _:69194a rdf:first ; rdf:rest _:69196a . _:69196a rdf:first _:69195a; rdf:rest rdf:nil . _:69195a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69197a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69198a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "photoreceptor neuron is contained in the posterior region of the eye"; "PMID: 20967238" . a owl:Class; owl:equivalentClass _:69199a; rdfs:subClassOf , , _:6919da; "muscle cell is contained in the lateral region"; "muscle cell contained in lateral region"; "Planarian_Anatomy"; rdfs:label "lateral muscle cell" . _:69199a a owl:Class; owl:intersectionOf _:6919aa . _:6919aa rdf:first ; rdf:rest _:6919ca . _:6919ca rdf:first _:6919ba; rdf:rest rdf:nil . _:6919ba a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6919da a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6919ea a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "muscle cell is contained in the lateral region"; "PMID: 29674431" . a owl:Class; owl:equivalentClass _:6919fa; rdfs:subClassOf , , _:691a3a; "muscle cell is contained in the anterior region"; "muscle cell contained in anterior region"; "Planarian_Anatomy"; rdfs:label "anterior muscle cell" . _:6919fa a owl:Class; owl:intersectionOf _:691a0a . _:691a0a rdf:first ; rdf:rest _:691a2a . _:691a2a rdf:first _:691a1a; rdf:rest rdf:nil . _:691a1a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:691a3a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:691a4a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "muscle cell is contained in the anterior region"; "PMID: 29674432" . a owl:Class; owl:equivalentClass _:691a5a; rdfs:subClassOf , , _:691a9a; "muscle cell is contained in the posterior region"; "muscle cell contained in posterior region"; "Planarian_Anatomy"; rdfs:label "posterior muscle cell" . _:691a5a a owl:Class; owl:intersectionOf _:691a6a . _:691a6a rdf:first ; rdf:rest _:691a8a . _:691a8a rdf:first _:691a7a; rdf:rest rdf:nil . _:691a7a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:691a9a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:691aaa a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "muscle cell is contained in the posterior region"; "PMID: 29674433" . a owl:Class; owl:equivalentClass _:691aba; rdfs:subClassOf , , _:691afa; "blastema which develops into head region"; "Planarian_Anatomy"; "PLANA:0003900"; rdfs:label "head blastema" . _:691aba a owl:Class; owl:intersectionOf _:691aca . _:691aca rdf:first ; rdf:rest _:691aea . _:691aea rdf:first _:691ada; rdf:rest rdf:nil . _:691ada a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:691afa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; owl:equivalentClass _:691b0a; rdfs:subClassOf , , _:691b4a; "blastema which develops into tail region"; "Planarian_Anatomy"; "PLANA:0003901"; rdfs:label "tail blastema" . _:691b0a a owl:Class; owl:intersectionOf _:691b1a . _:691b1a rdf:first ; rdf:rest _:691b3a . _:691b3a rdf:first _:691b2a; rdf:rest rdf:nil . _:691b2a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:691b4a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; owl:equivalentClass _:691b5a; rdfs:subClassOf , ; "a head fragment that is regenerating"; "Planarian_Anatomy"; rdfs:label "regenerating head fragment" . _:691b5a a owl:Class; owl:intersectionOf _:691b6a . _:691b6a rdf:first ; rdf:rest _:691b7a . _:691b7a rdf:first ; rdf:rest rdf:nil . a owl:Class; owl:equivalentClass _:691b8a; rdfs:subClassOf , ; "a trunk fragment that is regenerating"; "Planarian_Anatomy"; rdfs:label "regenerating trunk fragment" . _:691b8a a owl:Class; owl:intersectionOf _:691b9a . _:691b9a rdf:first ; rdf:rest _:691baa . _:691baa rdf:first ; rdf:rest rdf:nil . a owl:Class; owl:equivalentClass _:691bba; rdfs:subClassOf , ; "a tail fragment that is regenerating"; "Planarian_Anatomy"; rdfs:label "regenerating tail fragment" . _:691bba a owl:Class; owl:intersectionOf _:691bca . _:691bca rdf:first ; rdf:rest _:691bda . _:691bda rdf:first ; rdf:rest rdf:nil . a owl:Class; owl:equivalentClass _:691bea; rdfs:subClassOf , ; "a prepharyngeal fragment that is regenerating"; "Planarian_Anatomy"; rdfs:label "regenerating prepharyngeal fragment" . _:691bea a owl:Class; owl:intersectionOf _:691bfa . _:691bfa rdf:first ; rdf:rest _:691c0a . _:691c0a rdf:first ; rdf:rest rdf:nil . a owl:Class; owl:equivalentClass _:691c1a; rdfs:subClassOf , ; "a postpharyngeal fragment that is regenerating"; "Planarian_Anatomy"; rdfs:label "regenerating postpharyngeal fragment" . _:691c1a a owl:Class; owl:intersectionOf _:691c2a . _:691c2a rdf:first ; rdf:rest _:691c3a . _:691c3a rdf:first ; rdf:rest rdf:nil . a owl:Class; owl:equivalentClass _:691c4a; rdfs:subClassOf , ; "a anterior fragment that is regenerating"; "Planarian_Anatomy"; rdfs:label "regenerating anterior fragment" . _:691c4a a owl:Class; owl:intersectionOf _:691c5a . _:691c5a rdf:first ; rdf:rest _:691c6a . _:691c6a rdf:first ; rdf:rest rdf:nil . a owl:Class; owl:equivalentClass _:691c7a; rdfs:subClassOf , ; "a posterior fragment that is regenerating"; "Planarian_Anatomy"; rdfs:label "regenerating posterior fragment" . _:691c7a a owl:Class; owl:intersectionOf _:691c8a . _:691c8a rdf:first ; rdf:rest _:691c9a . _:691c9a rdf:first ; rdf:rest rdf:nil . a owl:Class; owl:equivalentClass _:691caa; rdfs:subClassOf , ; "a lateral fragment that is regenerating"; "Planarian_Anatomy"; rdfs:label "regenerating lateral fragment" . _:691caa a owl:Class; owl:intersectionOf _:691cba . _:691cba rdf:first ; rdf:rest _:691cca . _:691cca rdf:first ; rdf:rest rdf:nil . a owl:Class; owl:equivalentClass _:691cda; rdfs:subClassOf , ; "a longitudinal fragment that is regenerating"; "Planarian_Anatomy"; rdfs:label "regenerating longitudinal fragment" . _:691cda a owl:Class; owl:intersectionOf _:691cea . _:691cea rdf:first ; rdf:rest _:691cfa . _:691cfa rdf:first ; rdf:rest rdf:nil . a owl:Class; owl:equivalentClass _:691d0a; rdfs:subClassOf , ; "a plug fragment that is regenerating"; "Planarian_Anatomy"; rdfs:label "regenerating plug fragment" . _:691d0a a owl:Class; owl:intersectionOf _:691d1a . _:691d1a rdf:first ; rdf:rest _:691d2a . _:691d2a rdf:first ; rdf:rest rdf:nil . a owl:Class; owl:equivalentClass _:691d3a; rdfs:subClassOf , ; "a wedge fragment that is regenerating"; "Planarian_Anatomy"; rdfs:label "regenerating wedge fragment" . _:691d3a a owl:Class; owl:intersectionOf _:691d4a . _:691d4a rdf:first ; rdf:rest _:691d5a . _:691d5a rdf:first ; rdf:rest rdf:nil . a owl:Class; rdfs:subClassOf ; "A fully formed, sexually mature organism that reproduces through cross-fertilization."; ; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "PMID:11972158", "PMID:19022767"; "sexual adult", "sexually mature adult"; "Planarian_Anatomy"; rdfs:label "adult hermaphrodite" . _:691d6a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "A fully formed, sexually mature organism that reproduces through cross-fertilization."; "PMID:11972158", "PMID:19022767" . _:691d7a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget ; rdfs:comment "Depcited by field shows a light microscopy image of a sexually mature adult with a scale bar of 2 mm." . a owl:Class; rdfs:subClassOf ; "Asexually reproducing Schmidtea mediterranea exist as constitutive adults, undergoing successive cycles of fission and whole animal regeneration. Asexual Schmidtea mediterranea contain primordial germ cells, but do not possess a reproductive system."; ; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "PMID:11972158", "PMID:17376870"; "Planarian_Anatomy"; rdfs:label "asexual adult" . _:691d8a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Asexually reproducing Schmidtea mediterranea exist as constitutive adults, undergoing successive cycles of fission and whole animal regeneration. Asexual Schmidtea mediterranea contain primordial germ cells, but do not possess a reproductive system."; "PMID:11972158", "PMID:17376870" . _:691d9a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget ; rdfs:comment "Depicted by field shows an asexual adult with a scale bar of 500um" . a owl:Class; rdfs:subClassOf , , _:691daa, _:691dba, _:691dca, _:691dda, _:691dea, _:691dfa, _:691e0a, _:691e1a, _:691e2a, _:691e3a, _:691e4a; "dmd-1+ expressing somatic cells within the testis that promote male GSC maintenance. dmd-1+, ophis-1+ somatic gonadal cells ensheath germ cells via long cytoplasmic processes and promote differentiation."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "PMID:23652002", "PMID:27163480"; "somatic gonadal cell of the testis", "somatic niche cell of the testis", "somatic testis cell"; "Planarian_Anatomy"; rdfs:label "testis somatic gonadal cell" . _:691daa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:691dba a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:691dca a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:691dda a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:691dea a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:691dfa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:691e0a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:691e1a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:691e2a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:691e3a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:691e4a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:691e5a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "dmd-1+ expressing somatic cells within the testis that promote male GSC maintenance. dmd-1+, ophis-1+ somatic gonadal cells ensheath germ cells via long cytoplasmic processes and promote differentiation."; "PMID:23652002", "PMID:27163480" . a owl:Class; rdfs:subClassOf , , _:691e6a . _:691e6a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . rdfs:subClassOf _:691e7a, _:691e8a, _:691e9a, _:691eaa, _:691eba, _:691eca; "ophis+ somatic cells (gh4-, nanos-) in the ovary that may provide trophic support to female germline stem cells and differentiating oogonia."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "PMID:27163480"; "somatic follicular cell of the ovary", "somatic ovarian cell"; "Planarian_Anatomy"; rdfs:label "ovarian somatic gonadal cell" . _:691e7a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:691e8a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:691e9a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:691eaa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:691eba a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:691eca a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:691eda a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "ophis+ somatic cells (gh4-, nanos-) in the ovary that may provide trophic support to female germline stem cells and differentiating oogonia."; "PMID:27163480" . a owl:Class; owl:equivalentClass _:691eea; rdfs:subClassOf , _:691f3a, _:691f4a; "Axis that runs from the oral pole and to the aboral pole of the spherical embryo (Stage 3 through early Stage 6). The oral pole is centered around the embryonic pharynx; the aboral pole is located opposite the embryonic pharynx."; ; "oral-aboral axis of embryo"; "Planarian_Anatomy"; "PLANA:0004511"; rdfs:label "oral-aboral axis of the embryo" . _:691eea a owl:Class; owl:intersectionOf _:691f0a . _:691f0a rdf:first _:691efa; rdf:rest _:691f2a . _:691efa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:691f2a rdf:first _:691f1a; rdf:rest rdf:nil . _:691f1a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:691f3a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:691f4a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:691f5a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Axis that runs from the oral pole and to the aboral pole of the spherical embryo (Stage 3 through early Stage 6). The oral pole is centered around the embryonic pharynx; the aboral pole is located opposite the embryonic pharynx."; "PMID:28072387" . _:691f6a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget ; rdfs:comment "Illustration noting the oral-aboral axis in cyan double headed arrow. It starts at the embryonic pharynx and extends to opposite pole." . a owl:Class; rdfs:subClassOf , _:691f7a, _:691f8a, _:691f9a, _:691faa, _:691fba, _:691fca; "The apical surface of the single layered primitive ectoderm that is in contact with the environment."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "OCLC:20423827", "OCLC:464776945", "OCLC:82522822", "PMID:28072387", "https://github.com/obophenotype/planaria-ontology/blob/master/metadata/planarefs/planaref-0000001.md"; "Planarian_Anatomy"; rdfs:label "primitive ectoderm surface" . _:691f7a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:691f8a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:691f9a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:691faa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:691fba a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:691fca a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:691fda a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "The apical surface of the single layered primitive ectoderm that is in contact with the environment."; "OCLC:20423827", "OCLC:464776945", "OCLC:82522822", "PMID:28072387", "https://github.com/obophenotype/planaria-ontology/blob/master/metadata/planarefs/planaref-0000001.md" . a owl:Class; rdfs:subClassOf , _:691fea, _:691ffa, _:69200a, _:69201a, _:69202a, _:69203a; "The surface of the primitive gut cells in contact with the embryonic wall."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "PMID:28072387"; "Planarian_Anatomy"; rdfs:label "primtive gut cell surface" . _:691fea a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:691ffa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69200a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69201a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69202a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69203a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69204a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "The surface of the primitive gut cells in contact with the embryonic wall."; "PMID:28072387" . a owl:Class; rdfs:subClassOf , _:69205a, _:69206a, _:69207a, _:69208a, _:69209a, _:6920aa; "The surface of phagocytic embryonic gut cells in contact with ingested yolk cells."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "PMID:28072387"; "Planarian_Anatomy"; rdfs:label "embryonic gut cell surface" . _:69205a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69206a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69207a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69208a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69209a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6920aa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6920ba a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "The surface of phagocytic embryonic gut cells in contact with ingested yolk cells."; "PMID:28072387" . a owl:Class; rdfs:subClassOf , _:6920ca, _:6920da, _:6920ea, _:6920fa, _:69210a, _:69211a, _:69212a, _:69213a; "The epithelial cell surface lining the embryonic pharynx lumen."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "PMID:20100474", "PMID:28072387"; "Planarian_Anatomy"; rdfs:label "embryonic pharynx lumen epithelial surface" . _:6920ca a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6920da a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6920ea a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6920fa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69210a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69211a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69212a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69213a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69214a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "The epithelial cell surface lining the embryonic pharynx lumen."; "PMID:28072387" . a owl:Class; rdfs:subClassOf , , _:69215a, _:69216a, _:69217a, _:69218a, _:69219a, _:6921aa, _:6921ba, _:6921ca, _:6921da, _:6921ea, _:6921fa, _:69220a; "An undifferentiated, cycling embryonic cell in Stage 1-5 embryos that expresses piwi-1, numerous adult asexual neoblast enriched genes, and early embryo enriched genes. Blastomeres give rise to temporary embryonic tissues during Stage 2, continue dividing asynchronously in the embryonic wall, and ultimately give rise to neoblasts and adult lineage progenitors beginning in Stage 5."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "CL:0000353", "PMID:28072387"; "Planarian_Anatomy"; rdfs:label "blastomere" . _:69215a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69216a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69217a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69218a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69219a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6921aa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6921ba a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6921ca a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6921da a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6921ea a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6921fa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69220a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69221a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "An undifferentiated, cycling embryonic cell in Stage 1-5 embryos that expresses piwi-1, numerous adult asexual neoblast enriched genes, and early embryo enriched genes. Blastomeres give rise to temporary embryonic tissues during Stage 2, continue dividing asynchronously in the embryonic wall, and ultimately give rise to neoblasts and adult lineage progenitors beginning in Stage 5."; "PMID:28072387" . a owl:Class; rdfs:subClassOf ; "Post-mitotic, terminally differentiated cells which, give rise to temporary embryonic tissues."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "CL:0000349", "PMID:28072387"; "Planarian_Anatomy"; rdfs:label "extraembryonic cell" . _:69222a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Post-mitotic, terminally differentiated cells which, give rise to temporary embryonic tissues."; "PMID:28072387" . a owl:Class; rdfs:subClassOf , , , _:69223a, _:69224a, _:69225a, _:69226a, _:69227a, _:69228a, _:69229a, _:6922aa, _:6922ba, _:6922ca; "A neuronal cell innervating the embryonic pharynx. Four neurons innervate the radial muscle fibers that ring the oral opening."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "PMID:28072387"; "Planarian_Anatomy"; rdfs:label "embryonic pharynx neuron" . _:69223a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69224a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69225a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69226a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69227a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69228a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69229a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6922aa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6922ba a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6922ca a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6922da a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "A neuronal cell innervating the embryonic pharynx. Four neurons innervate the radial muscle fibers that ring the oral opening."; "PMID:28072387" . a owl:Class; rdfs:subClassOf , , , _:6922ea, _:6922fa, _:69230a, _:69231a, _:69232a, _:69233a, _:69234a, _:69235a, _:69236a, _:69237a; "Differentiated radial muscle cell present in the embryonic pharynx."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "PMID:16932928"; "embryonic pharynx radial muscle fiber"; "Planarian_Anatomy"; rdfs:label "embryonic pharynx radial muscle cell" . _:6922ea a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6922fa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69230a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69231a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69232a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69233a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69234a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69235a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69236a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69237a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69238a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Differentiated radial muscle cell present in the embryonic pharynx."; "PMID:16932928" . a owl:Class; rdfs:subClassOf , , , _:69239a, _:6923aa, _:6923ba, _:6923ca, _:6923da, _:6923ea, _:6923fa, _:69240a, _:69241a, _:69242a; "foxA1+ epithelial cell contained in the embryonic pharynx."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "PMID:20100474", "PMID:28072387"; "Planarian_Anatomy"; rdfs:label "embryonic pharynx epithelial cell" . _:69239a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6923aa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6923ba a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6923ca a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6923da a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6923ea a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6923fa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69240a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69241a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69242a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69243a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "foxA1+ epithelial cell contained in the embryonic pharynx."; "PMID:28072387" . a owl:Class; rdfs:subClassOf , , , _:69244a, _:69245a, _:69246a, _:69247a, _:69248a, _:69249a, _:6924aa, _:6924ba, _:6924ca, _:6924da; "Differentiated muscle cell present in a circular muscle fiber of the embryonic pharynx."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "PMID:16932928"; "embryonic pharynx circular muscle fiber"; "Planarian_Anatomy"; rdfs:label "embryonic pharynx circular muscle cell" . _:69244a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69245a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69246a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69247a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69248a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69249a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6924aa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6924ba a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6924ca a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6924da a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6924ea a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Differentiated muscle cell present in a circular muscle fiber of the embryonic pharynx."; "PMID:16932928" . a owl:Class; rdfs:subClassOf , , _:6924fa, _:69250a, _:69251a, _:69252a, _:69253a; "Portion of the sexual biotype body plan immediately posterior to the parapharyngeal region, and immediately anterior to the tail. Encompasses the copulatory apparatus."; ; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "PMID:22074376"; "Planarian_Anatomy"; rdfs:label "copulatory region" . _:6924fa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69250a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69251a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69252a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69253a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69254a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Portion of the sexual biotype body plan immediately posterior to the parapharyngeal region, and immediately anterior to the tail. Encompasses the copulatory apparatus."; "PMID:22074376" . _:69255a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget ; rdfs:comment "Depicted by field contains diagram representation of body region." . a owl:Class; rdfs:subClassOf , , _:69256a, _:69257a, _:69258a, _:69259a, _:6925aa, _:6925ba; "Epithelia associated with the pharynx organ."; ; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "UBERON:0003351"; "pharnyx epidermis", "pharyngeal epidermis", "pharyngeal epithelium"; "Planarian_Anatomy"; rdfs:label "pharynx epithelium" . _:69256a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69257a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69258a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69259a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6925aa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6925ba a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6925ca a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget ; rdfs:comment "Image is an electron micrograph of a transverse section through the pharynx. Outlined, is the outer epithium, which is an \"insunk\" epithelium where the nuclei are set back medially away from the epithelium surface. Here, just the surface is outlined.. Scale bar is 2um." . a owl:Class; rdfs:subClassOf , _:6925da, _:6925ea; "Connected anatomical system that forms a barrier between an animal and its environment. In vertebrates, the integumental system consists of the epidermis, dermis plus associated glands and adnexa such as hair and scales. In invertebrates, the integumental system may include cuticle."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "UBERON:0002416"; "Planarian_Anatomy"; rdfs:label "integumental system" . _:6925da a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6925ea a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6925fa a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Connected anatomical system that forms a barrier between an animal and its environment. In vertebrates, the integumental system consists of the epidermis, dermis plus associated glands and adnexa such as hair and scales. In invertebrates, the integumental system may include cuticle."; "UBERON:0002416" . a owl:Class; rdfs:subClassOf , , _:69260a, _:69261a, _:69262a, _:69263a, _:69264a; "Anatomical space enclosed by the oviduct epithelium."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "PMID:22074376", "TADS:0000435"; "Planarian_Anatomy"; rdfs:label "oviduct lumen" . _:69260a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69261a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69262a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69263a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69264a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69265a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Anatomical space enclosed by the oviduct epithelium."; "PMID:22074376" . a owl:Class; rdfs:subClassOf , , _:69266a, _:69267a, _:69268a, _:69269a, _:6926aa; "Anatomical space enclosed by the sperm duct epithelium."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "PMID:19022767", "PMID:22074376"; "Planarian_Anatomy"; rdfs:label "sperm duct lumen" . _:69266a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69267a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69268a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69269a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6926aa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6926ba a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Anatomical space enclosed by the sperm duct epithelium."; "PMID:19022767", "PMID:22074376" . a owl:Class; rdfs:subClassOf , , _:6926ca, _:6926da, _:6926ea, _:6926fa, _:69270a, _:69271a, _:69272a, _:69273a, _:69274a, _:69275a; "Ciliated epithelium lining the oviduct."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "CL:2000064", "PMID:22074376", "UBERON:0004804"; "Planarian_Anatomy"; rdfs:label "oviduct epithelium" . _:6926ca a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6926da a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6926ea a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6926fa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69270a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69271a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69272a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69273a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69274a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69275a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69276a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Ciliated epithelium lining the oviduct."; "PMID:22074376" . a owl:Class; rdfs:subClassOf , , _:69277a, _:69278a, _:69279a, _:6927aa, _:6927ba, _:6927ca, _:6927da, _:6927ea, _:6927fa, _:69280a; "Ciliated epithelium lining the sperm duct."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "PMID:19022767", "PMID:22074376"; "Planarian_Anatomy"; rdfs:label "sperm duct epithelium" . _:69277a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69278a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69279a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6927aa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6927ba a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6927ca a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6927da a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6927ea a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6927fa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69280a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69281a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Ciliated epithelium lining the sperm duct."; "PMID:19022767", "PMID:22074376" . a owl:Class; rdfs:subClassOf , , _:69282a, _:69283a, _:69284a, _:69285a, _:69286a; "Anatomical space enclosed by tuba. Oocyte(s) are fertilized in the tuba lumen by sperm that traveled up the oviduct."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "PMID:19022767", "PMID:20844018", "PMID:22074376", "PMID:27149082"; "Planarian_Anatomy"; rdfs:label "tuba lumen" . _:69282a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69283a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69284a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69285a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69286a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69287a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Anatomical space enclosed by tuba. Oocyte(s) are fertilized in the tuba lumen by sperm that traveled up the oviduct."; "PMID:19022767", "PMID:20844018", "PMID:22074376", "PMID:27149082" . a owl:Class; rdfs:comment "let odk import from BSPO if needed"; rdfs:label "obsolete coronal plane "; owl:deprecated true . a owl:Class; owl:equivalentClass _:69288a; rdfs:subClassOf , _:6928da, _:6928ea; "Anatomical plane which divides the body into right and left parts. This plane passes through the midline at the midline but does not always the midline."; ; "sagittal plane of whole organism"; "Planarian_Anatomy"; "PLANA:0007503"; rdfs:label "sagittal plane of the whole animal" . _:69288a a owl:Class; owl:intersectionOf _:6928aa . _:6928aa rdf:first _:69289a; rdf:rest _:6928ca . _:69289a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6928ca rdf:first _:6928ba; rdf:rest rdf:nil . _:6928ba a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6928da a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6928ea a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6928fa a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget ; rdfs:comment "Illustration of a sagittal plane of the whole animal (in green)." . a owl:Class; ; rdfs:comment "replaced by dorsal region PLANA:0000141"; rdfs:label "obsolete dorsal compartment"; owl:deprecated true . a owl:Class; rdfs:comment "now using patterned term ventral region PLANA:0000143"; rdfs:label "obsolete ventral compartment"; owl:deprecated true . a owl:Class; ; rdfs:comment "now using patterned term anterior region"; rdfs:label "obsolete anterior compartment"; owl:deprecated true . a owl:Class; ; rdfs:comment "replaced", "replacing duplicate PLANA term"; rdfs:label "obsolete posterior compartment"; owl:deprecated true . a owl:Class; ; rdfs:comment "choosing to use UBERON:0000476, acellular anatomical structure instead"; rdfs:label "obsolete extracellular component"; owl:deprecated true . a owl:Class; rdfs:subClassOf ; "The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins."; ; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "GO:0005886", "PMID:20511647", "PMID:27523733"; "cell membrane", "cytoplasmic membrane"; "Planarian_Anatomy"; rdfs:label "plasma membrane" . _:69290a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins."; "GO:0005886" . _:69291a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget ; rdfs:comment "Image is an electron micrograph showing several cells. Arrowheads label the plasma membrane, the boundary between cells. Scale bar is 1um." . a owl:Class; rdfs:subClassOf ; "Organized structure of distinctive morphology and function, occurring outside the cell. Includes, for example, extracellular membrane vesicles (EMVs) and the cellulosomes of anaerobic bacteria and fungi."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "GO:0043230"; "Planarian_Anatomy"; rdfs:label "extracellular organelle" . _:69292a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Organized structure of distinctive morphology and function, occurring outside the cell. Includes, for example, extracellular membrane vesicles (EMVs) and the cellulosomes of anaerobic bacteria and fungi."; "GO:0043230" . a owl:Class; rdfs:subClassOf ; "A spherical to rod shaped organelle that generates the majority of a cell's supply of ATP via cellular respiration. Mitochondria have their own genome and consist of outer and inner membranes, the latter folds inward to form cristae. This folding increases the surface area of the membrane and thus increases the space available to produce ATP. The inner and outer membranes are separated by an intermembrane space, and the inner membrane encloses the matrix."; ; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "GO:0005739", "PMID:21828097", "PMID:22318224", "PMID:26516985", "PMID:29100657"; "mitochondria"; "Planarian_Anatomy"; rdfs:label "mitochondrion" . _:69293a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget ; rdfs:comment "Image is an electron micrograph depicting a couple different cells. A few mitochondria have been labeled with arrowheads. Note the variation in shape from spherical to rod-like. This is dependent on cutting orientation at fission/fusion state of the mitochondria. Scale bar is 1 um." . a owl:Class; rdfs:subClassOf ; "Network of interconnected, flattened, and/or tubular membrane, known as cisternae. This membrane is contiguous with the outer nuclear membrane. The endoplasmic reticulum is involved in both protein and lipid synthesis."; ; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "GO:0005783", "PMID:30143032"; "Planarian_Anatomy"; rdfs:label "endoplasmic reticulum" . _:69294a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget ; rdfs:comment "Image is an electron micrograph depicting endoplasmic reticulum (magenta) in multiple cells. Scale bar is 0.5um." . a owl:Class; rdfs:subClassOf ; "Network of interconnected, flattened, and/or tubular membrane, known as cisternae. This membrane is contiguous with the outer nuclear membrane. The endoplasmic reticulum is involved in both protein and lipid synthesis. The outer surface is studded with protein-synthesizing particles known as ribosomes."; ; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "GO:0005791", "PMID:30143032"; "Planarian_Anatomy"; rdfs:label "rough endoplasmic reticulum" . _:69295a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget ; rdfs:comment "Image is an electron micrograph depicting the rough endoplasmic reticulum (arrowheads) of a cell. Ribosomes can be seen associating with the ER membrane creating a rough ER, as well as free within the cytoplasm of the cell. Scale bar is 200 nm." . a owl:Class; rdfs:subClassOf ; "Endoplamic reticulum that does not contain ribosomes, which synthesizes lipids, phospholipids, and steroids."; ; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "GO:0005790"; "Planarian_Anatomy"; rdfs:label "smooth endoplasmic reticulum" . _:69296a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget ; rdfs:comment "Image is an electron micrograph depicting smooth ER (arrowheads) in a cell, next to the nucleus (N). Ribosomes can be seen within the cytoplasm, but not associating with the ER membrane. Scale bar is 200 nm." . a owl:Class; rdfs:subClassOf , ; "Any of the numerous similar discrete openings in the nuclear envelope of a eukaryotic cell, where the inner and outer nuclear membranes are joined."; ; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "GO:0005643"; "Planarian_Anatomy"; rdfs:label "nuclear pore" . _:69297a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Any of the numerous similar discrete openings in the nuclear envelope of a eukaryotic cell, where the inner and outer nuclear membranes are joined."; "GO:0005643" . _:69298a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget ; rdfs:comment "Image is an electron micrograph depicting the nuclear envelope. The nucleus takes up the top left corner of the image and two nuclear pores have been labeled with arrowheads. Scale bar is 200 nm." . a owl:Class; rdfs:subClassOf ; "The digestive component of the cell. They are homogenous, dense, membrane bound organelles filled with acid hydrolases which break down polymers."; ; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "GO:0005764", "ISBN:0-71677033-4", "PMID:4853064"; "Planarian_Anatomy"; rdfs:label "lysosome" . _:69299a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget ; rdfs:comment "Image is an electron micrograph depicting two lysosomes (arrowheads) within a cell. The nucleus sits in the bottom left corner. Lysosomes can sometimes be identified by the swirling material they are breaking down inside. Scale bar is 0.5um." . a owl:Class; owl:equivalentClass _:6929aa; rdfs:subClassOf , _:6929fa, _:692a0a; "Axis that runs along the long axis of the animal from anterior (head) to posterior (tail). It is perpendicular to the dorsoventral axis and as such, it splits dorsal and ventral regions of the animal to either side."; ; "anterior-posterior axis", "anterior-posterior axis of whole organism", "body axis", "longitudinal axis", "main body axis"; "Planarian_Anatomy"; "PLANA:0007519"; rdfs:label "anterior-posterior axis of the whole animal" . _:6929aa a owl:Class; owl:intersectionOf _:6929ca . _:6929ca rdf:first _:6929ba; rdf:rest _:6929ea . _:6929ba a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6929ea rdf:first _:6929da; rdf:rest rdf:nil . _:6929da a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6929fa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:692a0a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:692a1a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget ; rdfs:comment "Depiction shows an asexual adult with the term annotated in yellow. Scale bar =500um" . a owl:Class; owl:equivalentClass _:692a2a; rdfs:subClassOf , _:692a7a, _:692a8a; "Axis that runs along the short axis of the animal, perpendicular to the anteroposterior axis, running from the dorsal (back) side of the animal to the ventral (belly) side of the animal. This axis splits anterior and posterior regions of the animal to either side."; ; "D/V axis", "DV axis", "dorsal-ventral axis", "dorsal-ventral axis of whole organism"; "Planarian_Anatomy"; "PLANA:0007520"; rdfs:label "dorsal-ventral axis of the whole animal" . _:692a2a a owl:Class; owl:intersectionOf _:692a4a . _:692a4a rdf:first _:692a3a; rdf:rest _:692a6a . _:692a3a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:692a6a rdf:first _:692a5a; rdf:rest rdf:nil . _:692a5a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:692a7a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:692a8a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:692a9a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Axis that runs along the short axis of the animal, perpendicular to the anteroposterior axis, running from the dorsal (back) side of the animal to the ventral (belly) side of the animal. This axis splits anterior and posterior regions of the animal to either side."; "PMID:18287199", "PMID:18786419", "PMID:19174194", "PMID:21295481", "PMID:21295483", "PMID:21664348", "PMID:21806978", "PMID:22445864", "PMID:23318641", "PMID:23954785", "PMID:24415944", "PMID:24523458", "PMID:25017721", "PMID:27063937", "PMID:27523733", "PMID:27612382", "PMID:28137894", "PMID:28292427", "PMID:28686611", "PMID:29100657", "PMID:29547123", "PMID:29674431", "PMID:30471994" . a owl:Class; owl:equivalentClass _:692aaa; rdfs:subClassOf , _:692afa, _:692b0a; "Axis perpendicular to both the anteroposterior and dorsoventral axis that runs from the left side of the animal, through the medial region (center) and out to the right side."; ; "dextro-sinister axis", "left-right axis", "left-right axis of whole organism"; "Planarian_Anatomy"; "PLANA:0007521"; rdfs:label "left-right axis of the whole animal" . _:692aaa a owl:Class; owl:intersectionOf _:692aca . _:692aca rdf:first _:692aba; rdf:rest _:692aea . _:692aba a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:692aea rdf:first _:692ada; rdf:rest rdf:nil . _:692ada a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:692afa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:692b0a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:692b1a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget ; rdfs:comment "Depiction shows an asexual adult with the term annotated in yellow. Scale bar =500um" . a owl:Class; owl:equivalentClass _:692b2a; rdfs:subClassOf , _:692b7a, _:692b8a; "Axis that runs from the center of the body, starting at the anteroposterior axis and out to the lateral (left, right, dorsal or ventral) surface of the animal."; ; "medial-lateral axis", "medial-lateral axis of whole organism", "mediolateral", "mediolateral axis"; "Planarian_Anatomy"; "PLANA:0007522"; rdfs:label "medial-lateral axis of the whole animal" . _:692b2a a owl:Class; owl:intersectionOf _:692b4a . _:692b4a rdf:first _:692b3a; rdf:rest _:692b6a . _:692b3a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:692b6a rdf:first _:692b5a; rdf:rest rdf:nil . _:692b5a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:692b7a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:692b8a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:692b9a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Axis that runs from the center of the body, starting at the anteroposterior axis and out to the lateral (left, right, dorsal or ventral) surface of the animal."; "PMID:20707997", "PMID:21282632", "PMID:21295483", "PMID:21664348", "PMID:21806978", "PMID:23250205", "PMID:23318641", "PMID:23903188", "PMID:23954785", "PMID:25017721", "PMID:26062938", "PMID:26525673", "PMID:27523733", "PMID:28287248", "PMID:29291981", "PMID:29547123", "PMID:30471994", "PMID:30962434" . _:692baa a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget ; rdfs:comment "Depiction shows an asexual adult with the term annotated in yellow. Scale bar =500um" . a owl:Class; owl:equivalentClass _:692bba; rdfs:subClassOf , _:692c0a, _:692c1a; "Axis that starts at the distal part of an appendage, closest to the body, and runs to the proximal part of an appendage, farthest from the body."; ; "proximal-distal axis", "proximal-distal axis of whole organism"; "Planarian_Anatomy"; "PLANA:0007523"; rdfs:label "proximal-distal axis of the whole animal" . _:692bba a owl:Class; owl:intersectionOf _:692bda . _:692bda rdf:first _:692bca; rdf:rest _:692bfa . _:692bca a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:692bfa rdf:first _:692bea; rdf:rest rdf:nil . _:692bea a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:692c0a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:692c1a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:692c2a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Axis that starts at the distal part of an appendage, closest to the body, and runs to the proximal part of an appendage, farthest from the body."; "PMID:21828097" . _:692c3a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget ; rdfs:comment "Pharynx of an asexual adult exposed by tricaine treatment. The proximodistal axis is denoted with the double headed magenta arrow." . a owl:Class; rdfs:subClassOf , , _:692c4a, _:692c5a, _:692c6a, _:692c7a, _:692c8a, _:692c9a, _:692caa, _:692cba; "Distinct anterior cluster of muscle cells located at the midline which express notum, follistatin, zic-1, and foxD."; ; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "PMID:18063755", "PMID:21566195", "PMID:23297191", "PMID:23318641", "PMID:23903188", "PMID:23954785", "PMID:24040508", "PMID:24415944", "PMID:24523458", "PMID:24704339", "PMID:24992682", "PMID:25254346", "PMID:25725068", "PMID:26062938", "PMID:26525673", "PMID:27074666", "PMID:27800171", "PMID:28216315", "PMID:28292427", "PMID:28893948", "PMID:29547123", "PMID:29906446", "PMID:30485821"; "anterior signaling center"; "Planarian_Anatomy"; rdfs:label "anterior pole" . _:692c4a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:692c5a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:692c6a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:692c7a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:692c8a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:692c9a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:692caa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:692cba a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:692cca a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Distinct anterior cluster of muscle cells located at the midline which express notum, follistatin, zic-1, and foxD."; "PMID:21566195", "PMID:23297191", "PMID:24040508", "PMID:24415944", "PMID:24704339", "PMID:24992682" . _:692cda a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget ; rdfs:comment "Illustration of the anterior pole (green)." . a owl:Class; rdfs:subClassOf , , _:692cea, _:692cfa, _:692d0a, _:692d1a, _:692d2a, _:692d3a, _:692d4a; "Distinct posterior cluster of muscle cells located at the midline which express wnt1."; ; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "PMID:18063755", "PMID:19805089", "PMID:21566195", "PMID:23318641", "PMID:23903188", "PMID:24415944", "PMID:25725068", "PMID:26062938", "PMID:27074666", "PMID:30485821"; "posterior regeneration pole"; "Planarian_Anatomy"; rdfs:label "posterior pole" . _:692cea a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:692cfa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:692d0a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:692d1a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:692d2a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:692d3a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:692d4a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:692d5a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Distinct posterior cluster of muscle cells located at the midline which express wnt1."; "PMID:18063755", "PMID:21680047" . _:692d6a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget ; rdfs:comment "Illustration of the posterior pole (in green)." . a owl:Class; rdfs:subClassOf , , _:692d7a, _:692d8a, _:692d9a, _:692daa, _:692dba, _:692dca, _:692dda, _:692dea, _:692dfa, _:692e0a, _:692e1a, _:692e2a, _:692e3a; "A non-neuronal cell of the nervous system. They not only provide physical support, but also respond to injury, regulate the ionic and chemical composition of the extracellular milieu, guide neuronal migration during development, and exchange metabolites with neurons."; ; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "CL:0000125", "PMID:27612382", "PMID:27612384", "PMID:28137894", "PMID:29674431", "PMID:29674432", "PMID:30471994"; "glia", "glia cell"; "Planarian_Anatomy"; rdfs:label "glial cell" . _:692d7a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:692d8a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:692d9a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:692daa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:692dba a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:692dca a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:692dda a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:692dea a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:692dfa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:692e0a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:692e1a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:692e2a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:692e3a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:692e4a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "A non-neuronal cell of the nervous system. They not only provide physical support, but also respond to injury, regulate the ionic and chemical composition of the extracellular milieu, guide neuronal migration during development, and exchange metabolites with neurons."; "PMID:27612384" . _:692e5a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget ; rdfs:comment "Image is an electron micrograph depicting a section of the ventral nerve cord. The arrowheads point at a likely glial cell. Note the difference in darkness of cytoplasm in the cell body of the glial cell compared to the surrounding axons. Scale bar is 2um." . a owl:Class; rdfs:subClassOf , _:692e6a, _:692e7a; "A biological tissue mass of nerve cell bodies."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "UBERON:0000045"; "ganglia"; "Planarian_Anatomy"; rdfs:label "ganglion" . _:692e6a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:692e7a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:692e8a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "A biological tissue mass of nerve cell bodies."; "UBERON:0000045" . a owl:Class; rdfs:subClassOf , , _:692e9a, _:692eaa, _:692eba, _:692eca, _:692eda, _:692eea; "Heavily ciliated epidermal cells covering the inner surface of the pharynx shaft."; ; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "OCLC:16809160", "PMID:24120894", "doi:10.1002/jmor.1051550208"; "epithelial pharynx lining", "epithelium lining the lumen of the pharynx", "inner epithelium", "inner pharyngeal epidermis", "inner pharyngeal epithelium", "inner pharynx epidermis", "inner pharynx epithelium"; "Planarian_Anatomy"; rdfs:label "pharynx inner epithelium" . _:692e9a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:692eaa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:692eba a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:692eca a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:692eda a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:692eea a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:692efa a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Heavily ciliated epidermal cells covering the inner surface of the pharynx shaft."; "OCLC:16809160", "doi:10.1002/jmor.1051550208" . _:692f0a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget ; rdfs:comment "Image is an electron micrograph of a transverse section through the pharynx. An epidermal cell, a part of the inner epithelial layer, has been marked with arrowheads. Immediately deep to the inner epithelial layer of the pharynx is musculature that has been colored. Magenta = circular; blue = longitudinal; yellow = radial. Scale bar is 5 um." . a owl:Class; rdfs:subClassOf , , _:692f1a, _:692f2a, _:692f3a, _:692f4a, _:692f5a, _:692f6a; "Pharynx muscle fibers running circumferentially about the pharynx."; ; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "ASIN:B000M4NK9M"; "pharyngeal circular muscle cell", "pharynx circular muscle cell", "pharynx circular muscle fiber"; "Planarian_Anatomy"; rdfs:label "pharynx circular muscle cell" . _:692f1a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:692f2a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:692f3a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:692f4a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:692f5a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:692f6a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:692f7a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Pharynx muscle fibers running circumferentially about the pharynx."; "ASIN:B000M4NK9M" . _:692f8a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget ; rdfs:comment "Image is an electron micrograph of a transverse section through the pharynx. The pharynx lumen it to the left. The inner circular muscle (arrowheads) is immediately deep to the inner epithelial layer of the pharynx. Magenta = circular; green = longitudinal; red = radial. Scale bar is 2 um." . a owl:Class; rdfs:comment "using part of instead"; rdfs:label "obsolete specific_to"; owl:deprecated true . a owl:Class; ; rdfs:comment "replacing duplicate PLANA term"; rdfs:label "obsolete brain"; owl:deprecated true . a owl:Class; rdfs:subClassOf , , _:692f9a, _:692faa, _:692fba, _:692fca, _:692fda, _:692fea, _:692ffa, _:69300a, _:69301a, _:69302a, _:69303a, _:69304a; "Groupings of specialized epithelial cells located along the dorsal ventral margin. Adhesion glands are comprised of three cell types, the viscid and releasing gland cells which penetrate through an epithelial anchor cell and terminate at the epidermal surface."; ; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "ISBN:9780070316607", "OCLC:16809160", "PMID:20865784"; "marginal adhesive gland"; "Planarian_Anatomy"; rdfs:label "adhesion gland" . _:692f9a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:692faa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:692fba a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:692fca a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:692fda a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:692fea a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:692ffa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69300a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69301a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69302a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69303a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69304a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69305a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Groupings of specialized epithelial cells located along the dorsal ventral margin. Adhesion glands are comprised of three cell types, the viscid and releasing gland cells which penetrate through an epithelial anchor cell and terminate at the epidermal surface."; "OCLC:16809160", "PMID:20865784" . _:69306a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget ; rdfs:comment "Image is an electron micrograph showing the multicellular total adhesion gland structure (outlined) embedded in the epidermis. Note that the gland cells cross the basal lamina into the epithelium. Ventral is up and scale bar is 2um." . a owl:Class; rdfs:subClassOf , , _:69307a, _:69308a, _:69309a, _:6930aa, _:6930ba, _:6930ca, _:6930da, _:6930ea, _:6930fa, _:69310a, _:69311a, _:69312a; "Specialized epithelial cell located along the dorsoventral margin that surrounds the viscid and releasing gland cells."; ; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "OCLC:16809160", "PMID:20865784"; "Planarian_Anatomy"; rdfs:label "anchor cell" . _:69307a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69308a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69309a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6930aa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6930ba a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6930ca a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6930da a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6930ea a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6930fa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69310a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69311a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69312a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69313a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Specialized epithelial cell located along the dorsoventral margin that surrounds the viscid and releasing gland cells."; "OCLC:16809160", "PMID:20865784" . _:69314a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget ; rdfs:comment "Image is an electron micrograph showing the total multicellualr adhesion gland structure. The anchor cell has been outlined, though mucus-filled projections of gland cells can be seen densely packed inside. Nucleus is that of the anchor cell. Ventral is up and scale bar is 2um." . a owl:Class; rdfs:subClassOf , , _:69315a, _:69316a, _:69317a, _:69318a, _:69319a, _:6931aa, _:6931ba, _:6931ca, _:6931da, _:6931ea, _:6931fa, _:69320a; "A specialized insunk epithelial cell that is part of the adhesion glands which is responsible for production and excretion of the viscid substance allowing adherence to a substrate."; ; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "OCLC:16809160", "PMID:20865784"; "Planarian_Anatomy"; rdfs:label "viscid gland cell" . _:69315a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69316a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69317a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69318a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69319a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6931aa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6931ba a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6931ca a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6931da a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6931ea a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6931fa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69320a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69321a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "A specialized insunk epithelial cell that is part of the adhesion glands which is responsible for production and excretion of the viscid substance allowing adherence to a substrate."; "OCLC:16809160", "PMID:20865784" . _:69322a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget ; rdfs:comment "Image is an electron micrograph showing the whole adhesion gland structure, specifically outlining a single cell (viscid gland cell) associated with this multicelluar structure. Ventral is up and scale bar is 2um." . a owl:Class; rdfs:subClassOf , , _:69323a, _:69324a, _:69325a, _:69326a, _:69327a, _:69328a, _:69329a, _:6932aa, _:6932ba, _:6932ca, _:6932da, _:6932ea; "Specialized insunk epithelial cell that is part of the adhesion gland which is responsible for production of releasing substance."; ; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "OCLC:16809160", "PMID:20865784"; "Planarian_Anatomy"; rdfs:label "releasing gland cell" . _:69323a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69324a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69325a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69326a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69327a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69328a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69329a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6932aa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6932ba a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6932ca a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6932da a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6932ea a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6932fa a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Specialized insunk epithelial cell that is part of the adhesion gland which is responsible for production of releasing substance."; "OCLC:16809160", "PMID:20865784" . _:69330a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget ; rdfs:comment "Image is an electron micrograph showing the whole adhesion gland structure. Arrowheads mark releasing gland cells which are associated with this multicelluar structure. The releasing gland cells have very small excretory particles compared to the neighboring viscid gland. Ventral is up and scale bar is 1um." . a owl:Class; rdfs:subClassOf , , _:69331a, _:69332a, _:69333a, _:69334a, _:69335a, _:69336a, _:69337a, _:69338a; "A subset of TrpA+ neurons, located medially in the cephalic ganglia, whose formation is dependent on function of runt-1 and ap2."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "PMID:25254346"; "TrpA+ neuron"; "Planarian_Anatomy"; rdfs:label "TrpA+ central nervous system neuron" . _:69331a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69332a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69333a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69334a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69335a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69336a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69337a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69338a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69339a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "A subset of TrpA+ neurons, located medially in the cephalic ganglia, whose formation is dependent on function of runt-1 and ap2."; "PMID:25254346" . a owl:Class; rdfs:subClassOf , , _:6933aa, _:6933ba, _:6933ca, _:6933da, _:6933ea, _:6933fa; "A subset of sensory neurons located along the dorsal head margin."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "PMID:12557210", "PMID:25254346", "PMID:29674431"; "cintillo+ neuron"; "Planarian_Anatomy"; rdfs:label "cintillo+ sensory neuron" . _:6933aa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6933ba a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6933ca a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6933da a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6933ea a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6933fa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69340a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "A subset of sensory neurons located along the dorsal head margin."; "PMID:12557210", "PMID:25254346", "PMID:29674431" . a owl:Class; rdfs:comment "no longer designating mediolateral regions using the contained_in object property"; rdfs:label "obsolete epidermal compartment"; owl:deprecated true . a owl:Class; rdfs:subClassOf , , _:69341a, _:69342a; "piwi-1+, runt-1+, ap2+ progenitor neoblasts required for production of TrpA+ neurons." . _:69341a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69342a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "PMID:25254346"; "Planarian_Anatomy"; rdfs:label "TrpA+ neural progenitor cell" . _:69343a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "piwi-1+, runt-1+, ap2+ progenitor neoblasts required for production of TrpA+ neurons."; "PMID:25254346" . a owl:Class; rdfs:subClassOf ; "piwi-1+, foxD+, prep+ progenitor neoblasts required for formation of the anterior pole."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "PMID:24415944"; "Planarian_Anatomy"; rdfs:label "anterior pole progenitor cell" . _:69344a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "piwi-1+, foxD+, prep+ progenitor neoblasts required for formation of the anterior pole."; "PMID:24415944" . a owl:Class; rdfs:subClassOf , , _:69345a, _:69346a, _:69347a, _:69348a; "Axon tracts from ganglia that cross the midline, connecting the two ventral nerve cords."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "PMID:17999079"; "Planarian_Anatomy"; rdfs:label "transverse commissure" . _:69345a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69346a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69347a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69348a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69349a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Axon tracts from ganglia that cross the midline, connecting the two ventral nerve cords."; "PMID:17999079" . a owl:Class; rdfs:comment "no longer designating mediolateral regions using the contained_in object property"; rdfs:label "obsolete body wall musculature compartment"; owl:deprecated true . a owl:Class; rdfs:subClassOf , , _:6934aa, _:6934ba; "piwi-1+, lhx1/5-1+, pitx+ progenitor neoblasts required for specification of tph+ serotonergic neurons."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "PMID:23903188", "PMID:24131630", "PMID:25254346"; "Planarian_Anatomy"; rdfs:label "serotonergic neural progenitor cell" . _:6934aa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6934ba a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6934ca a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "piwi-1+, lhx1/5-1+, pitx+ progenitor neoblasts required for specification of tph+ serotonergic neurons."; "PMID:23903188", "PMID:24131630", "PMID:25254346" . a owl:Class; rdfs:subClassOf , , _:6934da, _:6934ea; "piwi-1+, klf+ progenitor neoblasts required for production of cintillo+ sensory neurons."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "PMID:25254346"; "Planarian_Anatomy"; rdfs:label "klf+ sensory neuron progenitor cell" . _:6934da a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6934ea a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6934fa a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "piwi-1+, klf+ progenitor neoblasts required for production of cintillo+ sensory neurons."; "PMID:25254346" . a owl:Class; rdfs:subClassOf , , _:69350a; "A population of piwi-2+, ston-2+, elav-2+, ptprd-9+ and msi-1+ progenitors that give rise to one or more neuronal (pc-2+, synapsin+) lineages."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "PMID:27150006"; "vNeoblast"; "Planarian_Anatomy"; rdfs:label "nu neoblast" . _:69350a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69351a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "A population of piwi-2+, ston-2+, elav-2+, ptprd-9+ and msi-1+ progenitors that give rise to one or more neuronal (pc-2+, synapsin+) lineages."; "PMID:27150006" . a owl:Class; rdfs:subClassOf , , _:69352a, _:69353a, _:69354a, _:69355a, _:69356a; "A nerve extending laterally from the ventral nerve cord that innervates the submuscular plexus."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "PMID:17999079"; "Planarian_Anatomy"; rdfs:label "lateral nerve" . _:69352a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69353a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69354a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69355a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69356a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69357a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "A nerve extending laterally from the ventral nerve cord that innervates the submuscular plexus."; "PMID:17999079" . a owl:Class; rdfs:comment "no longer designating mediolateral regions using the contained_in object property"; rdfs:label "obsolete parenchymal compartment"; owl:deprecated true . a owl:Class; rdfs:subClassOf , , _:69358a; "piwi-1+, pax3/7+ progenitor neoblasts implicated in the production of DBH+ ventral midline neurons."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "PMID:25254346"; "Planarian_Anatomy"; rdfs:label "pax3/7+ neural progenitor cell" . _:69358a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69359a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "piwi-1+, pax3/7+ progenitor neoblasts implicated in the production of DBH+ ventral midline neurons."; "PMID:25254346" . a owl:Class; rdfs:subClassOf , , _:6935aa, _:6935ba, _:6935ca, _:6935da, _:6935ea, _:6935fa, _:69360a, _:69361a; "A lumen enclosed by the embryonic pharynx epithelial cells through which yolk cells are transported into the embryonic gut cavity."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "PMID:28072387"; "Planarian_Anatomy"; rdfs:label "embryonic pharynx lumen" . _:6935aa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6935ba a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6935ca a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6935da a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6935ea a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6935fa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69360a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69361a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69362a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "A lumen enclosed by the embryonic pharynx epithelial cells through which yolk cells are transported into the embryonic gut cavity."; "PMID:28072387" . a owl:Class; rdfs:subClassOf , , _:69363a, _:69364a, _:69365a, _:69366a, _:69367a, _:69368a, _:69369a, _:6936aa, _:6936ba, _:6936ca, _:6936da; "Nerve plexus surrounding the testis."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "PMID:17999079", "PMID:7833618"; "Planarian_Anatomy"; rdfs:label "testis nerve plexus" . _:69363a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69364a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69365a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69366a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69367a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69368a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69369a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6936aa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6936ba a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6936ca a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6936da a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6936ea a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Nerve plexus surrounding the testis."; "PMID:17999079", "PMID:7833618" . a owl:Class; rdfs:subClassOf ; "Transverse anatomical plane, located approximately 1-2 mm from the posterior extremity of an adult animal, at which fission occurs."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "OCLC:16809160", "PMID:11972158"; "Planarian_Anatomy"; rdfs:label "fission plane" . _:6936fa a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Transverse anatomical plane, located approximately 1-2 mm from the posterior extremity of an adult animal, at which fission occurs."; "OCLC:16809160", "PMID:11972158" . a owl:Class; rdfs:subClassOf , , _:69370a, _:69371a, _:69372a, _:69373a, _:69374a, _:69375a, _:69376a; "Nerve plexus surrounding the ovary."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "PMID:17999079", "PMID:7833618"; "Planarian_Anatomy"; rdfs:label "ovary nerve plexus" . _:69370a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69371a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69372a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69373a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69374a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69375a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69376a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69377a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Nerve plexus surrounding the ovary."; "PMID:17999079", "PMID:7833618" . a owl:Class; rdfs:comment "no longer designating mediolateral regions using the contained_in object property"; rdfs:label "obsolete gastrovascular compartment"; owl:deprecated true . a owl:Class; rdfs:subClassOf ; "Peripheral region of the head."; ; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "Planarian_Anatomy"; rdfs:label "head margin" . a owl:Class; rdfs:subClassOf , , _:69378a, _:69379a, _:6937aa; "Neurons that express the biogenic amine glutamate."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "CL:0000679", "PMID:24131630"; "Planarian_Anatomy"; rdfs:label "glutamatergic neuron" . _:69378a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69379a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6937aa a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:6937ba a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Neurons that express the biogenic amine glutamate."; "PMID:24131630" . a owl:Class; rdfs:subClassOf , , _:6937ca; "An individual member of the sexual biotype of Schmidtea mediterranea."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "Planarian_Anatomy"; rdfs:label "sexual organism" . _:6937ca a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , , _:6937da; "An individual member of the asexual biotype of Schmidtea mediterranea."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "CARO:0000030"; "Planarian_Anatomy"; rdfs:label "asexual organism" . _:6937da a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf ; "A neuron cell that does not have cilia."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "non cilated neuron", "uncilated neuon"; "Planarian_Anatomy"; rdfs:label "non-ciliated neuron" . _:6937ea a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "A neuron cell that does not have cilia."; "PMID:29674431" . a owl:Class; rdfs:subClassOf ; "A neuron that has cilia."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "WBbt:0006816"; "Planarian_Anatomy"; rdfs:label "cilated neuron" . _:6937fa a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "A neuron that has cilia."; "PMID:29674431" . a owl:Class; rdfs:subClassOf , , _:69380a, _:69381a; "A cell present near the brain and eye where photoreceptor axons form a bundle projecting out from the eye that are near axon choice points. Guidepost cells are positive for Arrestin, notum, fz5/8-4+, 6G10, and low levels of troponin, tropomyosin, colF-2 and mp-1."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "Planarian_Anatomy"; rdfs:label "guidepost cell" . _:69380a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69381a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69382a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "A cell present near the brain and eye where photoreceptor axons form a bundle projecting out from the eye that are near axon choice points. Guidepost cells are positive for Arrestin, notum, fz5/8-4+, 6G10, and low levels of troponin, tropomyosin, colF-2 and mp-1."; "PMID:32586989" . a owl:Class; rdfs:subClassOf ; "Guidepost cell associated with the visual circuit that are present near the eye, located along axons just anterior and ventral to the eye. Name acronym stands for notum+ muscle cell near eye."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "Planarian_Anatomy"; rdfs:label "NME cell" . _:69383a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Guidepost cell associated with the visual circuit that are present near the eye, located along axons just anterior and ventral to the eye. Name acronym stands for notum+ muscle cell near eye."; "PMID:32586989" . a owl:Class; rdfs:subClassOf ; "Guidepost cell assocaited with the visual circuit, present at the axon choice point ventral, posterior to and slightly medial to the eye. Name acronym stands for notum+ muscle cells at the choice point."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "Planarian_Anatomy"; rdfs:label "NMC cell" . _:69384a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Guidepost cell assocaited with the visual circuit, present at the axon choice point ventral, posterior to and slightly medial to the eye. Name acronym stands for notum+ muscle cells at the choice point."; "PMID:32586989" . a owl:Class; rdfs:subClassOf ; "Guidepost cell present at the medial brain, ventral to the optic chiasm. Closely associated with photoreceptor axons during regneration. Name acronym stands for notum+ brain cells."; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "Planarian_Anatomy"; rdfs:label "NBC cell" . _:69385a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Guidepost cell present at the medial brain, ventral to the optic chiasm. Closely associated with photoreceptor axons during regneration. Name acronym stands for notum+ brain cells."; "PMID:32586989" . a owl:Class; rdfs:subClassOf , , _:69386a, _:69387a, _:69388a; "A sexually immature member of the Schmidtea mediterranea sexuallly reproducing biotype"; "https://orcid.org/0000-0003-2569-1939 | https://orcid.org/0000-0002-7535-4407"; "juvenile"; "Planarian_Anatomy"; rdfs:label "juvenile organism" . _:69386a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69387a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:69388a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf ; "Material anatomical entity that is a single connected structure with inherent 3D shape generated by coordinated expression of the organism's own genome."; "AAO:0010825", "AEO:0000003", "BILA:0000003", "CARO:0000003", "EHDAA2:0003003", "EMAPA:0", "FBbt:00007001", "FMA:305751", "FMA:67135", "GAID:781", "HAO:0000003", "MA:0003000", "MESH:D000825", "SCTID:362889002", "TAO:0000037", "TGMA:0001823", "VHOG:0001759", "XAO:0003000", "ZFA:0000037", "http://dbpedia.org/ontology/AnatomicalStructure"; "biological structure", "connected biological structure"; "uberon"; "UBERON:0000061"; , ; rdfs:label "anatomical structure" . _:69389a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Material anatomical entity that is a single connected structure with inherent 3D shape generated by coordinated expression of the organism's own genome."; "CARO:0000003" . _:6938aa a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "connected biological structure"; "CARO:0000003" . a owl:Class; rdfs:subClassOf ; "A life cycle stage that starts with fertilization and ends with the fully formed embryo."; "BilaDO:0000002", "EV:0300001", "FBdv:00005289", "FMA:72652", "HsapDv:0000002", "MmusDv:0000002", "OGES:000000", "OGES:000022", "SCTID:296280003", "WBls:0000003", "WBls:0000092", "WBls:0000102", "XAO:1000012"; "embryonic stage"; "uberon"; "embryogenesis"; "UBERON:0000068"; rdfs:label "embryo stage" . _:6938ba a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "A life cycle stage that starts with fertilization and ends with the fully formed embryo."; "http://orcid.org/0000-0002-6601-2165" . a owl:Class; "A spatiotemporal region encompassing some part of the life cycle of an organism."; "this class represents a proper part of the life cycle of an organism. The class 'life cycle' should not be placed here"; "the WBls class 'all stages' belongs here as it is the superclass of other WBls stages", "we map the ZFS unknown stage here as it is logically equivalent to saying *some* life cycle stage"; "BILS:0000105", "EFO:0000399", "FBdv:00007012", "FMA:24120", "HsapDv:0000000", "MESH:D008018", "MmusDv:0000000", "OlatDv:0000010", "PdumDv:0000090", "WBls:0000002", "XAO:1000000", "ZFS:0000000", "ZFS:0100000", "ncithesaurus:Developmental_Stage"; "developmental stage", "stage"; "uberon"; "UBERON:0000105"; , , ; rdfs:label "life cycle stage" . _:6938ca a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "A spatiotemporal region encompassing some part of the life cycle of an organism."; "https://orcid.org/0000-0002-6601-2165" . a owl:Class; rdfs:subClassOf ; "Anatomical entity that has mass."; "AAO:0010264", "AEO:0000006", "BILA:0000006", "CARO:0000006", "EHDAA2:0003006", "FBbt:00007016", "FMA:67165", "HAO:0000006", "TAO:0001836", "TGMA:0001826", "VHOG:0001721"; "uberon"; "UBERON:0000465"; , ; rdfs:label "material anatomical entity" . _:6938da a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Anatomical entity that has mass."; "http://orcid.org/0000-0001-9114-8737" . a owl:Class; rdfs:subClassOf ; "Anatomical structure which is a subdivision of a whole organism, consisting of components of multiple anatomical systems, largely surrounded by a contiguous region of integument."; "Reflects CARO2. todo - check the inclusion of FMA 'cardinal body part here', and check child terms for consistency"; "AAO:0010053", "AEO:0000032", "BILA:0000032", "BIRNLEX:7", "CALOHA:TS-2084", "CARO:0000032", "EFO:0000808", "EHDAA2:0003032", "EMAPA:36031", "FBbt:00007009", "FMA:7153", "HAO:0000032", "MA:0002433", "MAT:0000293", "MESH:D001829", "MIAA:0000293", "NCIT:C32221", "TAO:0001308", "TGMA:0001840", "VHOG:0001758", "Wikipedia:Body_part", "XAO:0003013", "ZFA:0001308", "galen:BodyPart"; "anatomic region"; "uberon"; "body part", "body region", "cardinal body part"; "UBERON:0000475"; , , , , ; rdfs:label "organism subdivision" . _:6938ea a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Anatomical structure which is a subdivision of a whole organism, consisting of components of multiple anatomical systems, largely surrounded by a contiguous region of integument."; "CARO:0000032", "CARO:DOS", "http://orcid.org/0000-0001-9114-8737" . _:6938fa a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "anatomic region"; "MA:0002433" . _:69390a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "body region"; "FMA:7153" . _:69391a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "cardinal body part"; "FMA:7153" . a owl:Class; rdfs:subClassOf ; "Anatomical structure that consists of cell parts and cell substances and together does not constitute a cell or a tissue."; "AAO:0010268", "AEO:0000040", "BILA:0000040", "CARO:0000040", "EHDAA2:0003040", "FBbt:00007013", "FMA:63863", "HAO:0000040", "TAO:0000382", "TGMA:0001841", "XAO:0003162", "ZFA:0000382"; "uberon"; "acellular anatomical structures"; "UBERON:0000476"; , ; rdfs:label "acellular anatomical structure" . _:69392a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Anatomical structure that consists of cell parts and cell substances and together does not constitute a cell or a tissue."; "http://orcid.org/0000-0001-9114-8737" . _:69393a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "acellular anatomical structures"; "ZFA:0000382"; . a owl:Class; "Biological entity that is either an individual member of a biological species or constitutes the structural organization of an individual member of a biological species."; "AAO:0010841", "AEO:0000000", "BILA:0000000", "BIRNLEX:6", "CARO:0000000", "EHDAA2:0002229", "FBbt:10000000", "FMA:62955", "HAO:0000000", "MA:0000001", "NCIT:C12219", "TAO:0100000", "TGMA:0001822", "WBbt:0000100", "XAO:0000000", "ZFA:0100000"; "uberon"; "UBERON:0001062"; , ; rdfs:label "anatomical entity" . _:69394a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Biological entity that is either an individual member of a biological species or constitutes the structural organization of an individual member of a biological species."; "FMA:62955", "http://orcid.org/0000-0001-9114-8737" . a owl:Class; rdfs:subClassOf ; "Anatomical space which contains portions of one or more body substances and is bounded by the internal surface of one maximally connected anatomical structure. Examples: cranial cavity, pharyngeal recess space, nasal cavity, tooth socket, cavity of serous sac, lumen of stomach, lumen of artery, fornix of vagina."; "cavity"; "BIRNLEX:1011", "FMA:67552", "MA:0002447", "NCIT:C34007", "galen:Cavity"; "uberon"; "UBERON:0002553"; ; rdfs:label "anatomical cavity" . _:69395a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "Anatomical space which contains portions of one or more body substances and is bounded by the internal surface of one maximally connected anatomical structure. Examples: cranial cavity, pharyngeal recess space, nasal cavity, tooth socket, cavity of serous sac, lumen of stomach, lumen of artery, fornix of vagina."; "FMA:67552" . a owl:Class; rdfs:subClassOf ; "AEO:0000125", "CALOHA:TS-2122", "EHDAA2:0003125", "FBbt:00007006", "FMA:292313", "MIAA:0000019"; "uberon"; "developing structure", "developmental structure", "developmental tissue"; "UBERON:0005423"; ; rdfs:label "developing anatomical structure" . _:69396a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "developmental tissue"; "MIAA:0000019" . a owl:Class; rdfs:subClassOf ; "An anatomical structure that is undergoing regeneration."; "we define this in terms of active participation in regeneration, rather that capabilities. In this sense it is different from the AEO structure."; "AEO:0000200", "EHDAA2:0003233", "TAO:0005147", "XAO:0004059", "ZFA:0005147"; "uberon"; "regenerating tissue", "regenerating tissues", "regenerative tissue"; "UBERON:0007567"; rdfs:label "regenerating anatomical structure" . _:69397a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "An anatomical structure that is undergoing regeneration."; "http://orcid.org/0000-0002-6601-2165" . _:69398a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "regenerating tissue"; "ZFA:0005147" . _:69399a a owl:Axiom; owl:annotatedSource ; owl:annotatedProperty ; owl:annotatedTarget "regenerating tissues"; "ZFA:0005147"; . a owl:NamedIndividual, ; "example to be eventually removed"@en; rdfs:label "example to be eventually removed"@en . a owl:NamedIndividual, ; "failed exploratory term"@en; "The term was used in an attempt to structure part of the ontology but in retrospect failed to do a good job"@en; "Person:Alan Ruttenberg"@en; rdfs:label "failed exploratory term"@en . a owl:NamedIndividual, ; "metadata complete"@en; "Class has all its metadata, but is either not guaranteed to be in its final location in the asserted IS_A hierarchy or refers to another class that is not complete."@en; rdfs:label "metadata complete"@en . a owl:NamedIndividual, ; "organizational term"@en; "Term created to ease viewing/sort terms for development purpose, and will not be included in a release"@en; rdfs:label "organizational term"@en . a owl:NamedIndividual, ; "ready for release"@en; "Class has undergone final review, is ready for use, and will be included in the next release. Any class lacking \"ready_for_release\" should be considered likely to change place in hierarchy, have its definition refined, or be obsoleted in the next release. Those classes deemed \"ready_for_release\" will also derived from a chain of ancestor classes that are also \"ready_for_release.\""@en; rdfs:label "ready for release"@en . a owl:NamedIndividual, ; "metadata incomplete"@en; "Class is being worked on; however, the metadata (including definition) are not complete or sufficiently clear to the branch editors."@en; rdfs:label "metadata incomplete"@en . a owl:NamedIndividual, ; "uncurated"@en; "Nothing done yet beyond assigning a unique class ID and proposing a preferred term."@en; rdfs:label "uncurated"@en . a owl:NamedIndividual, ; "pending final vetting"@en; "All definitions, placement in the asserted IS_A hierarchy and required minimal metadata are complete. The class is awaiting a final review by someone other than the term editor."@en; rdfs:label "pending final vetting"@en . a owl:NamedIndividual, ; "placeholder removed"@en; rdfs:label "placeholder removed"@en . a owl:NamedIndividual, ; "terms merged"@en; "An editor note should explain what were the merged terms and the reason for the merge."@en; rdfs:label "terms merged"@en . a owl:NamedIndividual, ; "term imported"@en; "This is to be used when the original term has been replaced by a term imported from an other ontology. An editor note should indicate what is the URI of the new term to use."@en; rdfs:label "term imported"@en . a owl:NamedIndividual, ; "term split"@en; "This is to be used when a term has been split in two or more new terms. An editor note should indicate the reason for the split and indicate the URIs of the new terms created."@en; rdfs:label "term split"@en . a owl:NamedIndividual, ; "universal"@en; "Hard to give a definition for. Intuitively a \"natural kind\" rather than a collection of any old things, which a class is able to be, formally. At the meta level, universals are defined as positives, are disjoint with their siblings, have single asserted parents."@en; "Alan Ruttenberg"@en; "A Formal Theory of Substances, Qualities, and Universals, http://ontology.buffalo.edu/bfo/SQU.pdf"@en; rdfs:label "universal"@en . a owl:NamedIndividual, ; "defined class"@en; "A defined class is a class that is defined by a set of logically necessary and sufficient conditions but is not a universal"@en; "\"definitions\", in some readings, always are given by necessary and sufficient conditions. So one must be careful (and this is difficult sometimes) to distinguish between defined classes and universal."@en; "Alan Ruttenberg"@en; rdfs:label "defined class"@en . a owl:NamedIndividual, ; "named class expression"@en; "A named class expression is a logical expression that is given a name. The name can be used in place of the expression."@en; "named class expressions are used in order to have more concise logical definition but their extensions may not be interesting classes on their own. In languages such as OWL, with no provisions for macros, these show up as actuall classes. Tools may with to not show them as such, and to replace uses of the macros with their expansions"@en; "Alan Ruttenberg"@en; rdfs:label "named class expression"@en . a owl:NamedIndividual, ; "to be replaced with external ontology term"@en; "Terms with this status should eventually replaced with a term from another ontology."@en; "Alan Ruttenberg"@en; "group:OBI"@en; rdfs:label "to be replaced with external ontology term"@en . a owl:NamedIndividual, ; "requires discussion"@en; "A term that is metadata complete, has been reviewed, and problems have been identified that require discussion before release. Such a term requires editor note(s) to identify the outstanding issues."@en; "Alan Ruttenberg"@en; "group:OBI"@en; rdfs:label "requires discussion"@en . a owl:NamedIndividual, ; "The term was added to the ontology on the assumption it was in scope, but it turned out later that it was not."@en; "This obsolesence reason should be used conservatively. Typical valid examples are: un-necessary grouping classes in disease ontologies, a phenotype term added on the assumption it was a disease."@en; ; "https://github.com/information-artifact-ontology/ontology-metadata/issues/77"; "https://orcid.org/0000-0001-5208-3432"; rdfs:label "out of scope" . _:6939aa a owl:Restriction; owl:onProperty ; owl:someValuesFrom ; rdfs:subClassOf _:6939ba . _:6939ba a owl:Class; owl:unionOf _:6939da . _:6939da rdf:first _:6939ca; rdf:rest _:693a0a . _:6939ca a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:6939ea . _:6939ea a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:693a0a rdf:first _:6939fa; rdf:rest rdf:nil . _:6939fa a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:693a1a . _:693a1a a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:693a2a . _:693a2a a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:693a3a a owl:AllDifferent; owl:distinctMembers _:693a4a . _:693a4a rdf:first ; rdf:rest _:693a5a . _:693a5a rdf:first ; rdf:rest _:693a6a . _:693a6a rdf:first ; rdf:rest _:693a7a . _:693a7a rdf:first ; rdf:rest _:693a8a . _:693a8a rdf:first ; rdf:rest _:693a9a . _:693a9a rdf:first ; rdf:rest _:693aaa . _:693aaa rdf:first ; rdf:rest _:693aba . _:693aba rdf:first ; rdf:rest rdf:nil . _:693aca a owl:AllDifferent; owl:distinctMembers _:693ada . _:693ada rdf:first ; rdf:rest _:693aea . _:693aea rdf:first ; rdf:rest _:693afa . _:693afa rdf:first ; rdf:rest _:693b0a . _:693b0a rdf:first ; rdf:rest rdf:nil . a . a . a . a . a . a . a . a . a . a . a . a . a . a . a . a . a . a . a . a . a . a . a . a . a . a . a . a . _:693b1a a ; _:693b2a . _:693b2a a ; rdf:first _:693b3a; rdf:rest _:693b4a . _:693b3a a ; ; ; . _:693b4a a ; rdf:first _:693b5a . _:693b5a a ; ; . _:693b4a rdf:rest _:693b6a . _:693b6a a ; rdf:first _:693b7a; rdf:rest rdf:nil . _:693b7a a ; ; . _:693b1a _:693b8a . _:693b8a a ; rdf:first _:693b9a; rdf:rest rdf:nil . _:693b9a a ; ; ; . _:693baa a ; _:693bba; _:693bfa . _:693bba a ; rdf:first _:693bca; rdf:rest _:693bda . _:693bca a ; ; . _:693bda a ; rdf:first _:693bea; rdf:rest rdf:nil . _:693bea a ; ; ; . _:693bfa a ; rdf:first _:693c0a; rdf:rest rdf:nil . _:693c0a a ; ; ; . _:693c1a a ; _:693c2a; _:693c6a . _:693c2a a ; rdf:first _:693c3a; rdf:rest _:693c4a . _:693c3a a ; ; . _:693c4a a ; rdf:first _:693c5a; rdf:rest rdf:nil . _:693c5a a ; ; ; . _:693c6a a ; rdf:first _:693c7a; rdf:rest rdf:nil . _:693c7a a ; ; ; . _:693c8a a ; _:693c9a; _:693cda . _:693c9a a ; rdf:first _:693caa; rdf:rest _:693cba . _:693caa a ; ; . _:693cba a ; rdf:first _:693cca; rdf:rest rdf:nil . _:693cca a ; ; ; . _:693cda a ; rdf:first _:693cea; rdf:rest rdf:nil . _:693cea a ; ; ; . _:693cfa a ; _:693d0a; _:693d4a . _:693d0a a ; rdf:first _:693d1a; rdf:rest _:693d2a . _:693d1a a ; ; . _:693d2a a ; rdf:first _:693d3a; rdf:rest rdf:nil . _:693d3a a ; ; ; . _:693d4a a ; rdf:first _:693d5a; rdf:rest rdf:nil . _:693d5a a ; ; ; . _:693d6a a ; true; rdfs:comment "MF(X)-directly_regulates->MF(Y)-enabled_by->GP(Z) => MF(Y)-has_input->GP(Y) e.g. if 'protein kinase activity'(X) directly_regulates 'protein binding activity (Y)and this is enabled by GP(Z) then X has_input Z"; rdfs:label "infer input from direct reg"; _:693d7a; _:693dfa . _:693d7a a ; rdf:first _:693d8a; rdf:rest _:693d9a . _:693d8a a ; ; ; . _:693d9a a ; rdf:first _:693daa; rdf:rest _:693dba . _:693daa a ; ; ; . _:693dba a ; rdf:first _:693dca; rdf:rest _:693dda . _:693dca a ; ; . _:693dda a ; rdf:first _:693dea; rdf:rest rdf:nil . _:693dea a ; ; . _:693dfa a ; rdf:first _:693e0a; rdf:rest rdf:nil . _:693e0a a ; ; ; . _:693e1a a ; rdfs:comment """GP(X)-enables->MF(Y)-has_part->MF(Z) => GP(X) enables MF(Z), e.g. if GP X enables ATPase coupled transporter activity' and 'ATPase coupled transporter activity' has_part 'ATPase activity' then GP(X) enables 'ATPase activity'"""; rdfs:label "enabling an MF enables its parts"; _:693e2a; _:693e8a . _:693e2a a ; rdf:first _:693e3a; rdf:rest _:693e4a . _:693e3a a ; ; . _:693e4a a ; rdf:first _:693e5a; rdf:rest _:693e6a . _:693e5a a ; ; ; . _:693e6a a ; rdf:first _:693e7a; rdf:rest rdf:nil . _:693e7a a ; ; ; . _:693e8a a ; rdf:first _:693e9a; rdf:rest rdf:nil . _:693e9a a ; ; ; . _:693eaa a ; true; rdfs:comment "GP(X)-enables->MF(Y)-part_of->BP(Z) => GP(X) involved_in BP(Z) e.g. if X enables 'protein kinase activity' and Y 'part of' 'signal tranduction' then X involved in 'signal transduction'"; rdfs:label "involved in BP"; _:693eba; _:693f1a . _:693eba a ; rdf:first _:693eca; rdf:rest _:693eda . _:693eca a ; ; . _:693eda a ; rdf:first _:693eea; rdf:rest _:693efa . _:693eea a ; ; ; . _:693efa a ; rdf:first _:693f0a; rdf:rest rdf:nil . _:693f0a a ; ; ; . _:693f1a a ; rdf:first _:693f2a; rdf:rest rdf:nil . _:693f2a a ; ; ; . _:693f3a a ; _:693f4a; _:693fca . _:693f4a a ; rdf:first _:693f5a; rdf:rest _:693f6a . _:693f5a a ; ; ; . _:693f6a a ; rdf:first _:693f7a; rdf:rest _:693f8a . _:693f7a a ; ; . _:693f8a a ; rdf:first _:693f9a; rdf:rest _:693faa . _:693f9a a ; ; ; . _:693faa a ; rdf:first _:693fba; rdf:rest rdf:nil . _:693fba a ; ; ; . _:693fca a ; rdf:first _:693fda; rdf:rest rdf:nil . _:693fda a ; ; ; . _:693fea a ; rdfs:comment "This can't be added as a property chain because it causes a circularity violation for 'part of'."; _:693ffa; _:69403a . _:693ffa a ; rdf:first _:69400a; rdf:rest _:69401a . _:69400a a ; ; ; . _:69401a a ; rdf:first _:69402a; rdf:rest rdf:nil . _:69402a a ; ; ; . _:69403a a ; rdf:first _:69404a; rdf:rest rdf:nil . _:69404a a ; ; ; . _:69405a a ; rdfs:comment "This can't be added as a property chain because it causes a circularity violation for 'part of'."; _:69406a; _:6940aa . _:69406a a ; rdf:first _:69407a; rdf:rest _:69408a . _:69407a a ; ; ; . _:69408a a ; rdf:first _:69409a; rdf:rest rdf:nil . _:69409a a ; ; ; . _:6940aa a ; rdf:first _:6940ba; rdf:rest rdf:nil . _:6940ba a ; ; ; . _:6940ca a ; rdfs:comment "This can't be added as a property chain because it causes a circularity violation for 'part of'."; _:6940da; _:69411a . _:6940da a ; rdf:first _:6940ea; rdf:rest _:6940fa . _:6940ea a ; ; ; . _:6940fa a ; rdf:first _:69410a; rdf:rest rdf:nil . _:69410a a ; ; ; . _:69411a a ; rdf:first _:69412a; rdf:rest rdf:nil . _:69412a a ; ; ; . _:69413a a ; rdfs:comment "If a molecular function (X) has a regulatory subfunction, then any gene product which is an input to that subfunction has an activity that directly_regulates X. Note: this is intended for cases where the regaultory subfunction is protein binding, so it could be tightened with an additional clause to specify this."; rdfs:label "inferring direct reg edge from input to regulatory subfunction"; _:69414a; _:6941aa . _:69414a a ; rdf:first _:69415a; rdf:rest _:69416a . _:69415a a ; ; ; . _:69416a a ; rdf:first _:69417a; rdf:rest _:69418a . _:69417a a ; ; ; . _:69418a a ; rdf:first _:69419a; rdf:rest rdf:nil . _:69419a a ; ; ; . _:6941aa a ; rdf:first _:6941ba; rdf:rest rdf:nil . _:6941ba a ; ; ; . _:6941ca a ; rdfs:label "inferring direct neg reg edge from input to regulatory subfunction"; _:6941da; _:69423a . _:6941da a ; rdf:first _:6941ea; rdf:rest _:6941fa . _:6941ea a ; ; ; . _:6941fa a ; rdf:first _:69420a; rdf:rest _:69421a . _:69420a a ; ; ; . _:69421a a ; rdf:first _:69422a; rdf:rest rdf:nil . _:69422a a ; ; ; . _:69423a a ; rdf:first _:69424a; rdf:rest rdf:nil . _:69424a a ; ; ; . _:69425a a ; rdfs:label "inferring direct positive reg edge from input to regulatory subfunction"; _:69426a; _:6942ca . _:69426a a ; rdf:first _:69427a; rdf:rest _:69428a . _:69427a a ; ; ; . _:69428a a ; rdf:first _:69429a; rdf:rest _:6942aa . _:69429a a ; ; ; . _:6942aa a ; rdf:first _:6942ba; rdf:rest rdf:nil . _:6942ba a ; ; ; . _:6942ca a ; rdf:first _:6942da; rdf:rest rdf:nil . _:6942da a ; ; ; . _:6942ea a ; rdfs:label "effector input is compound function input"; _:6942fa; _:69433a . _:6942fa a ; rdf:first _:69430a; rdf:rest _:69431a . _:69430a a ; ; ; . _:69431a a ; rdf:first _:69432a; rdf:rest rdf:nil . _:69432a a ; ; ; . _:69433a a ; rdf:first _:69434a; rdf:rest rdf:nil . _:69434a a ; ; ; . _:69435a a ; rdfs:label "Input of effector is input of its parent MF"; _:69436a; _:6943aa . _:69436a a ; rdf:first _:69437a; rdf:rest _:69438a . _:69437a a ; ; ; . _:69438a a ; rdf:first _:69439a; rdf:rest rdf:nil . _:69439a a ; ; ; . _:6943aa a ; rdf:first _:6943ba; rdf:rest rdf:nil . _:6943ba a ; ; ; . _:6943ca a ; rdfs:comment "if effector directly regulates X, its parent MF directly regulates X"; _:6943da; _:69441a . _:6943da a ; rdf:first _:6943ea; rdf:rest _:6943fa . _:6943ea a ; ; ; . _:6943fa a ; rdf:first _:69440a; rdf:rest rdf:nil . _:69440a a ; ; ; . _:69441a a ; rdf:first _:69442a; rdf:rest rdf:nil . _:69442a a ; ; ; . _:69443a a ; rdfs:comment "if effector directly positively regulates X, its parent MF directly positively regulates X"; _:69444a; _:69448a . _:69444a a ; rdf:first _:69445a; rdf:rest _:69446a . _:69445a a ; ; ; . _:69446a a ; rdf:first _:69447a; rdf:rest rdf:nil . _:69447a a ; ; ; . _:69448a a ; rdf:first _:69449a; rdf:rest rdf:nil . _:69449a a ; ; ; . _:6944aa a ; rdfs:label "if effector directly negatively regulates X, its parent MF directly negatively regulates X"; _:6944ba; _:6944fa . _:6944ba a ; rdf:first _:6944ca; rdf:rest _:6944da . _:6944ca a ; ; ; . _:6944da a ; rdf:first _:6944ea; rdf:rest rdf:nil . _:6944ea a ; ; ; . _:6944fa a ; rdf:first _:69450a; rdf:rest rdf:nil . _:69450a a ; ; ; . _:69451a a ; _:69452a; _:69456a . _:69452a a ; rdf:first _:69453a; rdf:rest _:69454a . _:69453a a ; ; ; . _:69454a a ; rdf:first _:69455a; rdf:rest rdf:nil . _:69455a a ; ; ; . _:69456a a ; rdf:first _:69457a; rdf:rest rdf:nil . _:69457a a ; ; ; . _:69458a a ; _:69459a; _:6945da . _:69459a a ; rdf:first _:6945aa; rdf:rest _:6945ba . _:6945aa a ; ; ; . _:6945ba a ; rdf:first _:6945ca; rdf:rest rdf:nil . _:6945ca a ; ; ; . _:6945da a ; rdf:first _:6945ea; rdf:rest rdf:nil . _:6945ea a ; ; ; . _:6945fa a ; _:69460a; _:69464a . _:69460a a ; rdf:first _:69461a; rdf:rest _:69462a . _:69461a a ; ; ; . _:69462a a ; rdf:first _:69463a; rdf:rest rdf:nil . _:69463a a ; ; ; . _:69464a a ; rdf:first _:69465a; rdf:rest rdf:nil . _:69465a a ; ; ; . _:69466a a ; _:69467a; _:6946ba . _:69467a a ; rdf:first _:69468a; rdf:rest _:69469a . _:69468a a ; ; ; . _:69469a a ; rdf:first _:6946aa; rdf:rest rdf:nil . _:6946aa a ; ; ; . _:6946ba a ; rdf:first _:6946ca; rdf:rest rdf:nil . _:6946ca a ; ; ; . _:6946da a ; _:6946ea; _:69472a . _:6946ea a ; rdf:first _:6946fa; rdf:rest _:69470a . _:6946fa a ; ; ; . _:69470a a ; rdf:first _:69471a; rdf:rest rdf:nil . _:69471a a ; ; ; . _:69472a a ; rdf:first _:69473a; rdf:rest rdf:nil . _:69473a a ; ; ; . _:69474a a ; _:69475a; _:69479a . _:69475a a ; rdf:first _:69476a; rdf:rest _:69477a . _:69476a a ; ; ; . _:69477a a ; rdf:first _:69478a; rdf:rest rdf:nil . _:69478a a ; ; ; . _:69479a a ; rdf:first _:6947aa; rdf:rest rdf:nil . _:6947aa a ; ; ; .