PREFIX obo:
PREFIX rdf:
PREFIX rdfs:
PREFIX xsd:
obo:OMP_0000314 a rdfs:Class ;
rdfs:label "altered degree of nucleoid constriction at the onset of cell constriction" ;
rdfs:comment "This is a population average." ;
rdfs:subClassOf obo:OMP_0000347 .
obo:OMP_0007775 a rdfs:Class ;
rdfs:label "altered population growth on defined medium" ;
rdfs:comment "A population growth on defined medium phenotype where the rate and/or extent of growth on defined medium is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007774 .
obo:RO_0000052 a rdf:Property ;
rdfs:label "inheres_in" ;
rdfs:range .
obo:OMP_0007694 a rdfs:Class ;
rdfs:label "altered vegetative cell growth" ;
rdfs:comment "A vegetative cell growth phenotype in which the rate, timing, or extent of growth of the cell in the vegetative growth phase of the life cycle is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007687 , obo:OMP_0007691 .
a rdf:Property ;
rdfs:label "has_quality" ;
rdfs:comment "The relationship between a feature and an attribute." ;
rdfs:range .
obo:OMP_0007714 a rdfs:Class ;
rdfs:label "curving vegetative cell" ;
rdfs:comment "An altered cell shape phenotype seen in the vegetative growth phase of the life cycle where a cell is more curved along the long axis than the designated control. In a curved cell, the long axis follows a smooth bend rather than a straight line." ;
rdfs:subClassOf obo:OMP_0007708 .
obo:OMP_0007577 a rdfs:Class ;
rdfs:label "resistance to chemical stress phenotype" ;
rdfs:comment "A resistance to stress phenotype related to the resistance or sensitivity that microbes in a population show when exposed to a chemical." ;
rdfs:subClassOf obo:OMP_0007568 .
obo:OMP_0007387 a rdfs:Class ;
rdfs:label "altered pyrimidine requirement" ;
rdfs:comment "An altered growth factor requirement phenotype where the requirement for a pyrimidine base as a growth factor is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007079 , obo:OMP_0007379 .
obo:OMP_0000014 a rdfs:Class ;
rdfs:label "increased endospore formation" ;
rdfs:comment "An altered endospore formation phenotype where the rate, frequency, timing, or extent of endospore formation is increased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0006161 .
obo:PATO_0000689 a rdfs:Class ;
rdfs:label "continuous" ;
rdfs:comment "A quality of a single process inhering in a bearer by virtue of the bearer's being uninterrupted in time, sequence, substance, or extent." ;
rdfs:subClassOf obo:PATO_0000057 .
a rdf:Property ;
rdfs:label "different_in_magnitude_relative_to" ;
rdfs:comment "q1 different_in_magnitude_relative_to q2 if and only if magnitude(q1) NOT =~ magnitude(q2). Here, magnitude(q) is a function that maps a quality to a unit-invariant scale." ;
rdfs:domain obo:PATO_0000001 ;
rdfs:range obo:PATO_0000001 .
a rdf:Property ;
rdfs:label "directly_associated_with" ;
rdfs:comment "q1 directly_associated_with q2 iff q1 is dependent on q2, and the magnitude of q1 increases if the magnitude of q2 is increased, or the magnitude of q1 decreases if the magnitude of q2 is decreased. The relationship is not necessarily linear." ;
rdfs:domain obo:PATO_0000001 ;
rdfs:range obo:PATO_0000001 .
a rdf:Property ;
rdfs:label "decreased_in_magnitude_relative_to" ;
rdfs:comment "q1 decreased_in_magnitude_relative_to q2 if and only if magnitude(q1) < magnitude(q2). Here, magnitude(q) is a function that maps a quality to a unit-invariant scale." ;
rdfs:domain obo:PATO_0000001 ;
rdfs:range obo:PATO_0000001 ;
rdfs:subPropertyOf .
a rdf:Property ;
rdfs:label "similar_in_magnitude_relative_to" ;
rdfs:comment "q1 similar_in_magnitude_relative_to q2 if and only if magnitude(q1) =~ magnitude(q2). Here, magnitude(q) is a function that maps a quality to a unit-invariant scale." ;
rdfs:domain obo:PATO_0000001 ;
rdfs:range obo:PATO_0000001 .
a rdf:Property ;
rdfs:label "inversely_associated_with" ;
rdfs:comment "q1 inversely_associated_with q2 iff q1 is dependent on q2, and the magnitude of q1 decreases if the magnitude of q2 is increased, or the magnitude of q1 increases if the magnitude of q2 is decreased. The relationship is not necessarily linear." ;
rdfs:domain obo:PATO_0000001 ;
rdfs:range obo:PATO_0000001 .
a rdf:Property ;
rdfs:label "increased_in_magnitude_relative_to" ;
rdfs:comment "q1 increased_in_magnitude_relative_to q2 if and only if magnitude(q1) > magnitude(q2). Here, magnitude(q) is a function that maps a quality to a unit-invariant scale." ;
rdfs:domain obo:PATO_0000001 ;
rdfs:range obo:PATO_0000001 ;
rdfs:subPropertyOf .
obo:OMP_0007430 a rdfs:Class ;
rdfs:label "decreased asexual spore formation" ;
rdfs:comment "An altered asexual sporulation phenotype where the rate, frequency, timing, or extent of the process of forming asexual (mitotic) spores is decreased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007145 .
obo:OMP_0007980 a rdfs:Class ;
rdfs:label "decreased cell length variability" ;
rdfs:subClassOf obo:OMP_0007976 .
obo:OMP_0007772 a rdfs:Class ;
rdfs:label "altered vegetative population growth" ;
rdfs:comment "A population growth phenotype observed in the vegetative phase of the life cycle where the rate or extent of reproduction of a microbial population is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007157 .
obo:OMP_0007590 a rdfs:Class ;
rdfs:label "increased resistance to heat" ;
rdfs:comment "An altered resistance to heat shock phenotype where the resistance of a microbial population to heat shock is increased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007585 .
obo:OMP_0000252 a rdfs:Class ;
rdfs:label "metabolite accumulation" ;
rdfs:comment "A metabolic phenotype that deals with the accumulation of small intermediate or products of metabolism." ;
rdfs:subClassOf obo:OMP_0000180 .
obo:OMP_0007350 a rdfs:Class ;
rdfs:label "abolished protein secretion" ;
rdfs:comment "A decreased protein secretion phenotype where the process of protein secretion is abolished." ;
rdfs:subClassOf obo:OMP_0007349 .
obo:OMP_0006161 a rdfs:Class ;
rdfs:label "altered endospore formation" ;
rdfs:comment "A endospore formation phenotype where the frequency, rate, timing, or extent of endospore formation is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0000094 , obo:OMP_0007145 .
obo:PATO_0002008 a rdfs:Class ;
rdfs:label "concave 3-D shape" ;
rdfs:comment "A complete three dimensional shape in which there is a line connecting pair of points on the object that lies outside the object. Or: a shape with cavities. Contrast: concave." ;
rdfs:subClassOf obo:PATO_0002266 .
obo:BFO_0000051 a rdf:Property ;
rdfs:label "has_part" ;
rdfs:comment "Inverse of part_of." ;
rdfs:range .
obo:OMP_0007566 a rdfs:Class ;
rdfs:label "abolished meiosis I" ;
rdfs:comment "An abolished meiotic nuclear division phenotype in which the first meiotic nuclear division, in which homologous chromosomes are normally paired and segregated from each other, does not occur." ;
rdfs:subClassOf obo:OMP_0007565 .
obo:OMP_0007306 a rdfs:Class ;
rdfs:label "presence of inorganic nitrogen source utilization" ;
rdfs:comment "An inorganic nitrogen source utilization phenotype where a cell or cells can use an inorganic compound as the source of nitrogen." ;
rdfs:subClassOf obo:OMP_0007013 .
obo:OMP_0000297 a rdfs:Class ;
rdfs:label "decreased fraction of cells with one nucleoid" ;
rdfs:subClassOf obo:OMP_0000293 .
obo:OMP_0007685 a rdfs:Class ;
rdfs:label "presence of cell growth" ;
rdfs:comment "A cell growth phenotype where a cell irreversibly increases in size over time by accretion and biosynthetic production of matter similar to that already present." ;
rdfs:subClassOf obo:OMP_0007684 .
obo:OMP_0007003 a rdfs:Class ;
rdfs:label "increased positive supercoiling" ;
rdfs:comment "An altered DNA supercoiling phenotype where positive supercoiling is increased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0006126 .
obo:OMP_0007477 a rdfs:Class ;
rdfs:label "altered resistance to phenols" ;
rdfs:comment "A phenol resistance phenotype where the frequency, rate, timing, or extent of resistance to phenols is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007134 , obo:OMP_0007474 .
obo:RO_0002503 a rdf:Property ;
rdfs:label "towards" ;
rdfs:comment "Relation binding a relational quality or disposition to the relevant type of entity." ;
rdfs:range .
obo:OMP_0000072 a rdfs:Class ;
rdfs:label "filamentous" ;
rdfs:comment "A cell arrangement phenotype where cells are joined end-to-end in linear chains." ;
rdfs:subClassOf obo:OMP_0000003 .
obo:OMP_0007616 a rdfs:Class ;
rdfs:label "decreased frequency of double-strand DNA breaks" ;
rdfs:comment "A decreased frequency of DNA breaks phenotype where the frequency of double-strand breaks in chromosomal DNA is decreased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007607 .
obo:OMP_0007041 a rdfs:Class ;
rdfs:label "decreased positive chemotaxis" ;
rdfs:comment "A decreased chemotaxis phenotype where the frequency, rate, timing, or extent of positive chemotaxis by a motile microbe is decreased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0000503 .
obo:OMP_0000190 a rdfs:Class ;
rdfs:label "gram variable" ;
rdfs:comment "A gram stain phenotype where a cell or cells give variable results to the gram stain." ;
rdfs:subClassOf obo:OMP_0000191 .
obo:PATO_0001643 a rdfs:Class ;
rdfs:label "stubby" ;
rdfs:comment "A size quality inhering in a bearer by virtue of the bearer's having a short, stocky build." ;
rdfs:subClassOf obo:PATO_0000052 .
obo:OMP_0007229 a rdfs:Class ;
rdfs:label "endospore external encapsulating structure phenotype" ;
rdfs:comment "An endospore morphology phenotype that relates to the structures that lie outside the inner membrane of and surround the entire endospore." ;
rdfs:subClassOf obo:OMP_0007228 .
obo:OMP_0005009 a rdfs:Class ;
rdfs:label "acidophile" ;
rdfs:comment "A population growth phenotype that applies to microorganisms whose optimal growth occurs between pH 0 and 5.5." ;
rdfs:subClassOf obo:OMP_0005008 .
obo:OMP_0007735 a rdfs:Class ;
rdfs:label "decreased septation index" ;
rdfs:comment "An altered septation index phenotype in which the septation index is lower than a designated control." ;
rdfs:subClassOf obo:OMP_0007734 .
obo:OMP_0007202 a rdfs:Class ;
rdfs:label "abolished resistance to UV-C radiation" ;
rdfs:comment "A decreased resistance to UV-C radiation phenotype where the resistance of microbes in a population to UV-C radiation (100-280 nm) is abolished." ;
rdfs:subClassOf obo:OMP_0007201 .
obo:OMP_0007656 a rdfs:Class ;
rdfs:label "level of substance in cell phenotype" ;
rdfs:subClassOf obo:OMP_0007633 .
obo:OMP_0006149 a rdfs:Class ;
rdfs:label "abolished utilization of dinitrogen" ;
rdfs:comment "A decreased dinitrogen utilization phenotype where the ability to fix dinitrogen is abolished." ;
rdfs:subClassOf obo:OMP_0007029 , obo:OMP_0007191 .
obo:OMP_0007258 a rdfs:Class ;
rdfs:label "abolished colonization of a host" ;
rdfs:comment "A decreased colonization of a host phenotype where colonization of a host organism is abolished." ;
rdfs:subClassOf obo:OMP_0007254 , obo:OMP_0007257 .
obo:PATO_0002303 a rdfs:Class ;
rdfs:label "decreased object quality" ;
rdfs:comment "A quality of an object that has a value that is decreased compared to normal or average." ;
rdfs:subClassOf obo:PATO_0001241 , obo:PATO_0002301 .
obo:OMP_0007139 a rdfs:Class ;
rdfs:label "altered lantibiotic resistance phenotype" ;
rdfs:comment "A lantibiotic resistance phenotype where resistance to one or more lantibiotics is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0006011 , obo:OMP_0006020 .
obo:OMP_0006109 a rdfs:Class ;
rdfs:label "absence of outer membrane vesicles" ;
rdfs:comment "A outer membrane vesicles phenotype where a cell or cells don't produce outer membrane vesicles." ;
rdfs:subClassOf obo:OMP_0000202 .
obo:OMP_0007874 a rdfs:Class ;
rdfs:label "abolished resistance to A22" ;
rdfs:comment "The original term was deemed to be too granular. In its place, use OMP:0007880 abolished resistance to an antimicrobial agent. When using OMP:0007880 for annotation, enter a database identifier for the specific antimicrobial agent in the Annotation Extension field." .
obo:OMP_0007478 a rdfs:Class ;
rdfs:label "increased resistance to phenols" ;
rdfs:comment "An altered resistance to phenols phenotype where the frequency, rate, timing, or extent of resistance to phenols is increased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007477 .
obo:OMP_0007035 a rdfs:Class ;
rdfs:label "decreased organic nitrogen source utilization" ;
rdfs:comment "An altered nitrogen source utilization phenotype where the ability to use an organic N-containing compound as the source of nitrogen is decreased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007906 .
obo:OMP_0007303 a rdfs:Class ;
rdfs:label "abolished diazonium blue B staining" ;
rdfs:comment "A decreased diazonium blue B (DBB) staining phenotype where DBB staining of cells is abolished." ;
rdfs:subClassOf obo:OMP_0007296 , obo:OMP_0007301 .
obo:OMP_0000342 a rdfs:Class ;
rdfs:label "presence of nucleoid area variability" ;
rdfs:subClassOf obo:OMP_0007698 .
obo:OMP_0000044 a rdfs:Class ;
rdfs:label "altered cell circularity" ;
rdfs:comment "Cell circularity is defined as (2*pi*cell area/(cell perimeter)^2)." ;
rdfs:subClassOf obo:OMP_0000333 , obo:OMP_0007101 .
obo:OMP_0000159 a rdfs:Class ;
rdfs:label "absence of aerotaxis" ;
rdfs:comment "An aerotaxis phenotype where a motile microbe doesn't display directed movement in response to environmental oxygen (O2)." ;
rdfs:subClassOf obo:OMP_0000047 .
obo:OMP_0007763 a rdfs:Class ;
rdfs:label "absence of microtubule cytoskeleton" ;
rdfs:comment "A microtubule cytoskeleton phenotype where a microbial cell or cells lack a microtubule cytoskeleton." ;
rdfs:subClassOf obo:OMP_0007759 .
obo:OMP_0006037 a rdfs:Class ;
rdfs:label "increased resistance to macrolide" ;
rdfs:comment "A macrolide compound resistance phenotype where resistance to a macrolide compound is increased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0006031 .
obo:OMP_0006073 a rdfs:Class ;
rdfs:label "resistant to lantibiotic" ;
rdfs:comment "A lantibiotic resistance phenotype where an organism or cell is resistant to one or more lantibiotic compounds." ;
rdfs:subClassOf obo:OMP_0006011 .
obo:OMP_0006100 a rdfs:Class ;
rdfs:label "abolished motility by swimming" ;
rdfs:comment "A decreased motility by swimming phenotype where the ability of a microbe to move by swimming motility is abolished." ;
rdfs:subClassOf obo:OMP_0007000 , obo:OMP_0007093 , obo:OMP_0007490 .
obo:OMP_0005065 a rdfs:Class ;
rdfs:label "decreased frequency of gene silencing" ;
rdfs:comment "An gene silencing phenotype where gene silencing is decreased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0006003 .
obo:OMP_0005196 a rdfs:Class ;
rdfs:label "increased anaerobic population growth rate" ;
rdfs:comment "An altered anaerobic growth phenotype where the anaerobic growth rate is increased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007926 .
obo:OMP_0005233 a rdfs:Class ;
rdfs:label "cell wall morphology phenotype" ;
rdfs:comment "A cell envelope morphology phenotype relating to the structure, size, shape, or appearance of the cell wall, which is a rigid or semi-rigid layer that surrounds the plasma membrane and maintains cell shape and helps protect against osmotic lysis." ;
rdfs:subClassOf obo:OMP_0000085 .
obo:OMP_0000055 a rdfs:Class ;
rdfs:label "absence of negative chemotaxis" ;
rdfs:comment "An absence of chemotaxis phenotype where an organism doesn't display directed movement toward a lower concentration of a specific chemical." ;
rdfs:subClassOf obo:OMP_0000097 .
obo:OMP_0000202 a rdfs:Class ;
rdfs:label "outer membrane vesicles phenotype" ;
rdfs:comment "A cell envelope phenotype that describes the ability of a cell or cells to produce outer membrane vesicles." ;
rdfs:subClassOf obo:OMP_0000085 .
obo:OMP_0007936 a rdfs:Class ;
rdfs:label "increased resistance to nutrient limitation" ;
rdfs:subClassOf obo:OMP_0007935 .
obo:OMP_0005386 a rdfs:Class ;
rdfs:label "capsid morphology phenotype" ;
rdfs:comment "A virion morphology phenotype related to the form and structure of the capsid of the virion." ;
rdfs:subClassOf obo:OMP_0007541 .
obo:OMP_0007746 a rdfs:Class ;
rdfs:label "altered vegetative cell phenotype" ;
rdfs:comment "A phenotype observed at the level of an individual vegetative cell that is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007638 , obo:OMP_0007745 .
obo:OMP_0007931 a rdfs:Class ;
rdfs:label "altered population phenotype" ;
rdfs:comment "A microbial population phenotype where the phenotype of a microbial population is altered in some way relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007006 .
obo:OMP_0006089 a rdfs:Class ;
rdfs:label "urease positive" ;
rdfs:comment "A urease test phenotype where an organism exhibits urease activity." ;
rdfs:subClassOf obo:OMP_0000222 .
obo:OMP_0000307 a rdfs:Class ;
rdfs:label "DNA replication phenotype" ;
rdfs:comment "A genetic material phenotype related to the process of DNA-dependent DNA replication that takes place as part of the cell cycle." ;
rdfs:subClassOf obo:OMP_0000290 , obo:OMP_0000306 , obo:OMP_0005115 .
obo:OMP_0007706 a rdfs:Class ;
rdfs:label "viable spore population" ;
rdfs:comment "A cell population phenotype in which cells in a population of spores are viable." ;
rdfs:subClassOf obo:OMP_0007457 .
obo:OMP_0005105 a rdfs:Class ;
rdfs:label "abolished resistance to freeze/thawing stress" ;
rdfs:comment "A decreased resistance to freeze/thawing stress phenotype where resistance to freeze/thawing is abolished." ;
rdfs:subClassOf obo:OMP_0005090 .
obo:OMP_0007537 a rdfs:Class ;
rdfs:label "increased resistance to a urea derivative" ;
rdfs:comment "An altered resistance to a urea derivative phenotype where resistance to a derivative of urea is increased relative to a designated control." .
obo:OMP_0000003 a rdfs:Class ;
rdfs:label "cell arrangement phenotype" ;
rdfs:comment "A microbial phenotype where the trait in question is the arrangement of cells of a microbe in relation to one another." ;
rdfs:subClassOf obo:OMP_0000000 .
obo:OMP_0007130 a rdfs:Class ;
rdfs:label "differential test phenotype" ;
rdfs:comment "A microbial phenotype related to the presence or absence of a biochemical activity in a test used to differentiate and identify microorganisms." ;
rdfs:subClassOf obo:OMP_0000000 .
obo:OMP_0007786 a rdfs:Class ;
rdfs:label "absence of cellular process during vegetative growth" ;
rdfs:comment "A microbial phenotype where a microbe does not carry out the specified cellular process." ;
rdfs:subClassOf obo:OMP_0007783 .
obo:OMP_0006140 a rdfs:Class ;
rdfs:label "abolished resistance to bacteriocin" ;
rdfs:comment "A decreased resistance to bacteriocin phenotype where resistance to one or more bacteriocins is abolished." ;
rdfs:subClassOf obo:OMP_0006048 , obo:OMP_0006050 .
obo:OMP_0007556 a rdfs:Class ;
rdfs:label "hyphal morphology phenotype" ;
rdfs:comment "A multicellular microorganism morphology phenotype relating to the size, shape, or appearance of a hypha, which is a branching filamentous structure that consists of one or more cells surrounded by a tubular cell wall." ;
rdfs:subClassOf obo:OMP_0007555 .
obo:OMP_0000213 a rdfs:Class ;
rdfs:label "increased number of flagella" ;
rdfs:comment "An altered flagellum phenotype where the number of flagella per cell is increased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007432 .
obo:OMP_0007696 a rdfs:Class ;
rdfs:label "decreased vegetative cell growth" ;
rdfs:comment "An altered vegetative cell growth phenotype in which the rate, timing, or extent of growth of the cell in the vegetative growth phase of the life cycle is decreased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007694 .
obo:OMP_0005334 a rdfs:Class ;
rdfs:label "presence of protein localization" ;
rdfs:comment "A protein localization phenotype where an organism, cell, or cells exhibit protein localization." ;
rdfs:subClassOf obo:OMP_0005332 .
obo:OMP_0007466 a rdfs:Class ;
rdfs:label "increased flocculation" ;
rdfs:comment "An altered flocculation phenotype where the frequency, rate, timing, or extent of flocculation is increased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007465 .
obo:OMP_0005244 a rdfs:Class ;
rdfs:label "altered filamentous growth" ;
rdfs:comment "A filamentous growth phenotype where the frequency, rate, or extent of filamentous growth is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0005243 .
obo:OMP_0000111 a rdfs:Class ;
rdfs:label "presence of motility by swimming" ;
rdfs:comment "A presence of motility phenotype where a microbe exhibits smooth movement through a liquid medium." ;
rdfs:subClassOf obo:OMP_0000005 .
obo:OMP_0007925 a rdfs:Class ;
rdfs:label "abolished cell size variability within a cell population" ;
rdfs:subClassOf obo:OMP_0007922 , obo:OMP_0007923 .
obo:OMP_0007797 a rdfs:Class ;
rdfs:label "absence of vegetative cell population growth" ;
rdfs:subClassOf obo:OMP_0007795 .
obo:OMP_0007025 a rdfs:Class ;
rdfs:label "decreased vitamin/enzyme cofactor requirement" ;
rdfs:comment "A vitamin/enzyme cofactor requirement phenotype the requirement for a vitamin/enzyme cofactor in the growth medium is decreased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007075 , obo:OMP_0007082 .
obo:OMP_0000278 a rdfs:Class ;
rdfs:label "decreased cell perimeter length variability" ;
rdfs:subClassOf obo:OMP_0000277 .
obo:OMP_0006053 a rdfs:Class ;
rdfs:label "increased resistance to azole compound" ;
rdfs:comment "An azole compound resistance phenotype where resistance to an azole compound is increased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0006019 .
obo:OMP_0007717 a rdfs:Class ;
rdfs:label "decreased viability of vegetative microbial cell" ;
rdfs:comment "An altered microbial cell viability phenotype observed in the vegetative phase of the growth cycle where the viability of a vegetative microbial cell is decreased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007261 , obo:OMP_0007724 .
obo:OMP_0000245 a rdfs:Class ;
rdfs:label "participates in multi-species biofilm" ;
rdfs:comment "A biofilm phenotype where the formation involves two or more species." ;
rdfs:subClassOf obo:OMP_0000176 .
obo:OMP_0000320 a rdfs:Class ;
rdfs:label "presence of cell diameter variability" ;
rdfs:subClassOf obo:OMP_0007921 .
obo:OMP_0007724 a rdfs:Class ;
rdfs:label "altered vegetative cell viability" ;
rdfs:comment "A cell viability phenotype observed in the vegetative phase of the growth cycle where the ability of a microbial cell to survive, germinate, and go on to grow and reproduce in the specified conditions is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007260 .
obo:GO_0043170 a rdfs:Class ;
rdfs:label "macromolecule metabolic process" ;
rdfs:comment "The chemical reactions and pathways involving macromolecules, any molecule of high relative molecular mass, the structure of which essentially comprises the multiple repetition of units derived, actually or conceptually, from molecules of low relative molecular mass." ;
rdfs:subClassOf obo:GO_0071704 .
obo:OMP_0007764 a rdfs:Class ;
rdfs:label "altered microtubule cytoskeleton morphology" ;
rdfs:comment "A microtubule cytoskeleton morphology phenotype where the size, shape, or structure of the microtubule cytoskeleton is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007759 .
obo:OMP_0007645 a rdfs:Class ;
rdfs:label "microbial lifestyle phenotype" ;
rdfs:comment "A microbial phenotype related to the typical way of life of a microbe." ;
rdfs:subClassOf obo:OMP_0000000 .
obo:OMP_0005116 a rdfs:Class ;
rdfs:label "multi-organism process phenotype" ;
rdfs:comment "A microbial phenotype related to a biological process that involves two or more organisms of the same or different species." ;
rdfs:subClassOf obo:OMP_0000000 .
obo:OMP_0006138 a rdfs:Class ;
rdfs:label "abolished resistance to aminopyrimidine" ;
rdfs:comment "A decreased resistance to aminopyrimidines phenotype where resistance to aminopyrimidine compounds is abolished." ;
rdfs:subClassOf obo:OMP_0000335 , obo:OMP_0000436 .
obo:OMP_0007247 a rdfs:Class ;
rdfs:label "resistant to a chemical" ;
rdfs:comment "A chemical resistance phenotype where growth and reproduction of a microbe occurs in the presence of a chemical." ;
rdfs:subClassOf obo:OMP_0007195 .
obo:GO_0046483 a rdfs:Class ;
rdfs:label "heterocycle metabolic process" ;
rdfs:comment "The chemical reactions and pathways involving heterocyclic compounds, those with a cyclic molecular structure and at least two different atoms in the ring (or rings)." ;
rdfs:subClassOf obo:GO_0044237 .
obo:OMP_0005345 a rdfs:Class ;
rdfs:label "decreased resistance to organic aromatic compounds" ;
rdfs:comment "An altered organic aromatic compound resistance phenotype where resistance to one or more is decreased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0005344 .
obo:OMP_0000101 a rdfs:Class ;
rdfs:label "microbial communication phenotype" ;
rdfs:comment "A multi-organism phenotype where microbial organisms communicate and coordinate their activities through chemical signals that either diffuse through the environment or remain cell associated." ;
rdfs:subClassOf obo:OMP_0005116 .
obo:OMP_0007986 a rdfs:Class ;
rdfs:label "increased cell area" ;
rdfs:subClassOf obo:OMP_0007983 .
obo:OMP_0005389 a rdfs:Class ;
rdfs:label "presence of non-contractile tail" ;
rdfs:comment "A phage tail phenotype where the tail does not contract to inject its DNA into the host." ;
rdfs:subClassOf obo:OMP_0005383 .
obo:OMP_0007605 a rdfs:Class ;
rdfs:label "altered frequency of DNA breaks" ;
rdfs:comment "A DNA break phenotype where the frequency of breaks in chromosomal DNA is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007602 .
obo:OMP_0007235 a rdfs:Class ;
rdfs:label "absence of multiple fission" ;
rdfs:comment "A multiple fission phenotype where an organism lacks the ability to multiply by the process of multiple fission." ;
rdfs:subClassOf obo:OMP_0007068 .
obo:OMP_0007499 a rdfs:Class ;
rdfs:label "increased resistance to an epoxide" ;
rdfs:comment "An altered epoxide resistance phenotype where the frequency, rate, timing, or extent of resistance to epoxide is increased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007498 .
obo:OMP_0007128 a rdfs:Class ;
rdfs:label "altered cell arrangement" ;
rdfs:comment "A cell arrangement phenotype where the arrangement of cells is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0000003 , obo:OMP_0007085 .
obo:OMP_0007074 a rdfs:Class ;
rdfs:label "increased growth factor requirement" ;
rdfs:comment "A growth factor requirement phenotype where an organism's requirement for one or more growth factors is increased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007079 .
obo:OMP_0007191 a rdfs:Class ;
rdfs:label "absence of dinitrogen utilization" ;
rdfs:comment "A dinitrogen utilization phenotype where an organism lacks the ability to use dinitrogen as the source of nitrogen." ;
rdfs:subClassOf obo:OMP_0006030 .
obo:OMP_0007444 a rdfs:Class ;
rdfs:label "absence of lethality in mice" ;
rdfs:comment "An absence of lethality phenotype where the host of the infection is a mouse (or mice) (Mus musculus)." ;
rdfs:subClassOf obo:OMP_0007396 .
obo:OMP_0007599 a rdfs:Class ;
rdfs:label "abolished population growth" ;
rdfs:comment "A decreased population growth phenotype where reproduction of a microbial population is abolished." ;
rdfs:subClassOf obo:OMP_0007598 .
obo:OMP_0007467 a rdfs:Class ;
rdfs:label "decreased flocculation" ;
rdfs:comment "An altered flocculation phenotype where the frequency, rate, timing, or extent of flocculation is decreased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007465 .
obo:OMP_0007841 a rdfs:Class ;
rdfs:label "increased viability of vegetative microbial cell" ;
rdfs:comment "An altered microbial cell viability phenotype observed in the vegetative phase of the growth cycle where the viability of a vegetative microbial cell is increased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007262 , obo:OMP_0007724 .
obo:OMP_0007014 a rdfs:Class ;
rdfs:label "organic nitrogen source utilization phenotype" ;
rdfs:comment "A nitrogen source utilization phenotype where an organic nitrogen-containing compound is the source of nitrogen." ;
rdfs:subClassOf obo:OMP_0006026 .
obo:OMP_0000195 a rdfs:Class ;
rdfs:label "decreased catalase activity" ;
rdfs:comment "An altered catalase activity phenotype where catalase activity is decreased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0006077 .
obo:PATO_0000970 a rdfs:Class ;
rdfs:label "permeability" ;
rdfs:comment "A structural quality inhering in a bearer by virtue of the bearer's disposition to being permeated or pervaded by a gas or liquid (as by osmosis or diffusion)." ;
rdfs:subClassOf obo:PATO_0000141 .
obo:PATO_0000502 a rdfs:Class ;
rdfs:label "delayed" ;
rdfs:comment "A quality of a process which starts later than the natural start time or the reference process." ;
rdfs:subClassOf obo:PATO_0002325 .
obo:OMP_0000368 a rdfs:Class ;
rdfs:label "cell division ratio variability phenotype" ;
rdfs:subClassOf obo:OMP_0007794 .
obo:OMP_0005378 a rdfs:Class ;
rdfs:label "altered sexual sporulation frequency" ;
rdfs:comment "A sexual sporulation efficiency phenotype where the efficiency of sexual sporulation is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0005377 .
obo:OMP_0005258 a rdfs:Class ;
rdfs:label "increased microaerophilic population growth rate" ;
rdfs:comment "An altered microaerophilic population growth phenotype where the rate of growth of a microbial population in a microaerophilic environment is increased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007930 .
obo:OMP_0007816 a rdfs:Class ;
rdfs:label "increased cellular pigment accumulation" ;
rdfs:comment "An altered cellular pigment accumulation phenotype observed in the vegetative growth phase of the life cycle where the rate, extent, or timing of the process of pigment accumulation by a microbial cell or cells is increased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007815 .
obo:OMP_0007794 a rdfs:Class ;
rdfs:label "cell population growth phenotype" ;
rdfs:comment "A cell population phenotype that affects the rate or extent of growth of a population of microbial cells." ;
rdfs:subClassOf obo:OMP_0007167 , obo:OMP_0007698 .
obo:OMP_0007407 a rdfs:Class ;
rdfs:label "absence of ascospore formation" ;
rdfs:comment "An ascospore formation phenotype where a microbe lacks the ability to form ascospores." ;
rdfs:subClassOf obo:OMP_0007401 .
obo:PATO_0001305 a rdfs:Class ;
rdfs:label "increased temperature" ;
rdfs:comment "A temperature which is relatively high." ;
rdfs:subClassOf obo:PATO_0000146 , obo:PATO_0002305 .
obo:OMP_0007783 a rdfs:Class ;
rdfs:label "cellular process phenotype during vegetative growth" ;
rdfs:comment "A phenotype that affects a cellular process in the vegetative phase of the life cycle." ;
rdfs:subClassOf obo:OMP_0007332 .
obo:OMP_0000050 a rdfs:Class ;
rdfs:label "decreased amount of capsule" ;
rdfs:comment "An altered capsule phenotype where the amount of capsule produced is decreased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007133 .
obo:OMP_0008057 a rdfs:Class ;
rdfs:label "plaque morphology phenotype" ;
rdfs:comment "A bacteriophage plaque morphology phenotype where the bacteria shows a certain size and appearance of the plaque." ;
rdfs:subClassOf obo:OMP_0007238 .
obo:OMP_0007545 a rdfs:Class ;
rdfs:label "altered haploid fruiting" ;
rdfs:comment "A haploid fruiting phenotype where the rate, frequency, timing, or extent of the process of haploid fruiting is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007144 , obo:OMP_0007542 .
obo:OMP_0005247 a rdfs:Class ;
rdfs:label "abolished filamentous growth" ;
rdfs:comment "A decreased filamentous growth phenotype where the ability of a microorganism to exhibit filamentous growth is abolished." ;
rdfs:subClassOf obo:OMP_0005246 .
obo:OMP_0007332 a rdfs:Class ;
rdfs:label "cellular process phenotype" ;
rdfs:comment "A biological process phenotype that affects a cellular process, which is any biological process that is carried out at the cellular level, but not necessarily restricted to a single cell." ;
rdfs:subClassOf obo:OMP_0007194 .
obo:OMP_0007584 a rdfs:Class ;
rdfs:label "absence of resistance to heat shock" ;
rdfs:comment "A resistance to heat shock phenotype where a microbial population stops growing and may begin to die when exposed to a heat shock." ;
rdfs:subClassOf obo:OMP_0007579 .
obo:OMP_0007854 a rdfs:Class ;
rdfs:label "abolished inorganic carbon source utilization" ;
rdfs:comment "A decreased inorganic carbon source utilization phenotype where the ability to use an inorganic carbon source is abolished." ;
rdfs:subClassOf obo:OMP_0007850 , obo:OMP_0007853 .
obo:OMP_0007451 a rdfs:Class ;
rdfs:label "increased lethality in immunocompromised mice" ;
rdfs:comment "A decreased lethality phenotype where the ability of an infectious microbe to cause death of an immunocompromised murine host is decreased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007400 .
obo:OMP_0005312 a rdfs:Class ;
rdfs:label "altered colonization of rabbit tissue" ;
rdfs:comment "A colonization of rabbit tissue phenotype where the frequency, rate, timing, or extent of colonization is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0005284 , obo:OMP_0005309 .
obo:OMP_0000100 a rdfs:Class ;
rdfs:label "colony morphology phenotype" ;
rdfs:comment "A multicellular phenotype dealing with the physical characteristics of an assemblage of microorganisms growing on a solid surface such as the surface of an agar culture medium." ;
rdfs:subClassOf obo:OMP_0007315 .
obo:OMP_0007206 a rdfs:Class ;
rdfs:label "increased resistance to UV-A" ;
rdfs:comment "An increased UV-radiation resistance phenotype where the resistance of microbes in a population to UV-A radiation (typically, 315-400 nm) is increased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0005097 .
obo:OMP_0007314 a rdfs:Class ;
rdfs:label "increased apoptosis" ;
rdfs:comment "An altered apoptosis phenotype where the occurrence of apoptosis is increased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007312 .
obo:OMP_0005059 a rdfs:Class ;
rdfs:label "transposable element transposition phenotype" ;
rdfs:comment "A genetic material phenotype dealing with DNA sequences that change positions within the genome." ;
rdfs:subClassOf obo:OMP_0000000 , obo:OMP_0000290 , obo:OMP_0007194 .
obo:OMP_0007294 a rdfs:Class ;
rdfs:label "diazonium blue B staining phenotype" ;
rdfs:comment "A cell staining phenotype where microorganisms are classified based on their color after staining with diazonium blue B (DBB). DBB staining is used to differentiate ascomycetous and basidiomycetous yeasts." ;
rdfs:subClassOf obo:OMP_0000214 .
obo:OMP_0007910 a rdfs:Class ;
rdfs:label "not resistant to a chelator" ;
rdfs:subClassOf obo:OMP_0007908 .
obo:OMP_0007850 a rdfs:Class ;
rdfs:label "absence of inorganic carbon source utilization" ;
rdfs:subClassOf obo:OMP_0006023 .
obo:OMP_0007175 a rdfs:Class ;
rdfs:label "presence of aerobic respiration" ;
rdfs:comment "An aerobic respiration phenotype where an organism, cell, or cells have the ability to perform aerobic respiration." ;
rdfs:subClassOf obo:OMP_0000216 .
obo:OMP_0007159 a rdfs:Class ;
rdfs:label "altered response to radiation stress" ;
rdfs:comment "A radiation stress phenotype that is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0005081 , obo:OMP_0007158 .
obo:OMP_0000148 a rdfs:Class ;
rdfs:label "quarter cell nucleoid localization" ;
rdfs:comment "A nucleoid localization phenotype where the nucleoid is localized midway between the pole and midpoint of a cell." ;
rdfs:subClassOf obo:OMP_0000145 .
obo:OMP_0000230 a rdfs:Class ;
rdfs:label "rugose colony surface" ;
rdfs:comment "A colony surface phenotype that is characterized by a surface that is wrinkled." ;
rdfs:subClassOf obo:OMP_0000210 .
obo:OMP_0007703 a rdfs:Class ;
rdfs:label "increased cell population viability" ;
rdfs:comment "An altered cell population viability phenotype where the proportion of cells that survive a specified treatment is increased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007459 .
obo:OMP_0006048 a rdfs:Class ;
rdfs:label "decreased resistance to bacteriocin" ;
rdfs:comment "An altered bacteriocin resistance phenotype where resistance is decreased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0006020 .
obo:OMP_0007011 a rdfs:Class ;
rdfs:label "increased population growth at alkaline pH" ;
rdfs:comment "An altered population growth phenotype where rate and/or extent of growth of a microbial population at alkaline pH (> pH 7) is increased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007138 .
obo:OMP_0007890 a rdfs:Class ;
rdfs:label "metal resistance phenotype" ;
rdfs:comment "A chemical resistance phenotype relating to the resistance or sensitivity of growth and reproduction of a microbial population in the presence of a metal." ;
rdfs:subClassOf obo:OMP_0007195 .
obo:OMP_0007757 a rdfs:Class ;
rdfs:label "more rounded vegetative cell" ;
rdfs:comment "An altered cell shape phenotype seen in the vegetative growth phase of the life cycle where a cell's shape is more spherical than that of a designated control. In more rounded cells, there is much less difference between the long and short axes of the cell than in the designated control cells." ;
rdfs:subClassOf obo:OMP_0007102 , obo:OMP_0007708 .
obo:PATO_0000915 a rdfs:Class ;
rdfs:label "thickness" ;
rdfs:comment "A 1-D extent quality which is equal to the dimension through an object as opposed to its length or width." ;
rdfs:subClassOf obo:PATO_0001708 .
obo:OMP_0005057 a rdfs:Class ;
rdfs:label "absence of site-specific recombination" ;
rdfs:comment "A site-specific recombination phenotype where a cell or cells lack the ability to perform site-specific recombination." ;
rdfs:subClassOf obo:OMP_0005043 .
obo:OMP_0006104 a rdfs:Class ;
rdfs:label "abolished catalase activity" ;
rdfs:comment "A decreased catalase activity phenotype where catalase activity is abolished." ;
rdfs:subClassOf obo:OMP_0000195 , obo:OMP_0000198 .
obo:OMP_0006155 a rdfs:Class ;
rdfs:label "abolished utilization of organic sulfur" ;
rdfs:comment "A decreased utilization of organic sulfur phenotype where the ability to utilize an organic sulfur source is abolished." ;
rdfs:subClassOf obo:OMP_0007058 , obo:OMP_0007326 .
obo:OMP_0007264 a rdfs:Class ;
rdfs:label "drug-dependent population growth phenotype" ;
rdfs:comment "A population growth phenotype related to whether reproduction of an organism is dependent on the presence of a drug in the growth medium." ;
rdfs:subClassOf obo:OMP_0007167 .
obo:OMP_0005054 a rdfs:Class ;
rdfs:label "altered basal expression of the SOS response" ;
rdfs:comment "An altered SOS response phenotype where basal or uninduced expression of one or more genes in the SOS response is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0005018 .
obo:OMP_0005375 a rdfs:Class ;
rdfs:label "increased negative osmotaxis" ;
rdfs:comment "An increased osmotaxis phenotype where negative osmotaxis by a motile microbe is increased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0005374 .
obo:OMP_0006008 a rdfs:Class ;
rdfs:label "photosynthesis phenotype" ;
rdfs:comment "A phototrophic phenotype where light is used as an energy source to fix carbon to create chemical energy in the form of carbohydrate molecules." ;
rdfs:subClassOf obo:OMP_0007064 .
obo:OMP_0007887 a rdfs:Class ;
rdfs:label "abolished resistance to a metal" ;
rdfs:comment "A decreased metal resistance phenotype where growth and reproduction of a microbe in the presence of a metal is abolished." ;
rdfs:subClassOf obo:OMP_0007885 , obo:OMP_0007886 .
obo:OMP_0005035 a rdfs:Class ;
rdfs:label "quick-stop DNA replication" ;
rdfs:comment "A conditional DNA replication phenotype where incorporation of dNTPs into DNA ceases at the same rate as inactivation or depletion of a required gene product upon shift to a restrictive condition." ;
rdfs:subClassOf obo:OMP_0007147 .
obo:OMP_0007473 a rdfs:Class ;
rdfs:label "abolished ascospore formation" ;
rdfs:comment "An altered ascospore formation phenotype where the formation of ascospores is abolished." ;
rdfs:subClassOf obo:OMP_0007407 , obo:OMP_0007472 .
obo:OMP_0008035 a rdfs:Class ;
rdfs:label "natural competence phenotype" ;
rdfs:comment "A genetic transfer phenotype related to the ability of microbes to take up extracellular DNA from the environment under natural conditions." ;
rdfs:subClassOf obo:OMP_0008028 .
obo:OMP_0005166 a rdfs:Class ;
rdfs:label "superoxide dismutase activity phenotype" ;
rdfs:comment "An enzymatic activity phenotype relating to the presence or absence of superoxide dismutase, an enzyme that catalyzes the reaction: 2 superoxide + 2 H+ = O2 + hydrogen peroxide." ;
rdfs:subClassOf obo:OMP_0000221 .
obo:OMP_0007526 a rdfs:Class ;
rdfs:label "altered lethality in an invertebrate host" ;
rdfs:comment "An altered lethality phenotype where the ability of an infectious microbe to cause death of an invertebrate host is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007397 .
obo:OMP_0005330 a rdfs:Class ;
rdfs:label "decreased agar invasion phenotype" ;
rdfs:comment "An altered agar invasion phenotype where the frequency, rate, timing, or extent of agar invasion is decreased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0005328 .
obo:OMP_0000173 a rdfs:Class ;
rdfs:label "response to stress phenotype" ;
rdfs:comment "A biological process phenotype related to a change in state or activity of a microbe (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation)." ;
rdfs:subClassOf obo:OMP_0007194 .
obo:OMP_0006126 a rdfs:Class ;
rdfs:label "altered DNA supercoiling" ;
rdfs:comment "A DNA supercoiling phenotype where supercoiling is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0000294 .
obo:OMP_0007553 a rdfs:Class ;
rdfs:label "clamp cell morphology phenotype" ;
rdfs:comment "A hyphal morphology phenotype relating to the size, shape, or appearance of a clamp cell, which is a hook-like projection that forms on the apical cell of a fungal hypha and will form a clamp connection with the pre-apical cell." ;
rdfs:subClassOf obo:OMP_0007556 .
obo:OMP_0007847 a rdfs:Class ;
rdfs:label "fosfomycin resistance phenotype" ;
rdfs:comment "An antimicrobial agent resistance phenotype relating to the resistance or sensitivity of a microbe to fosfomycin." ;
rdfs:subClassOf obo:OMP_0000274 .
obo:OMP_0007022 a rdfs:Class ;
rdfs:label "decreased purine requirement" ;
rdfs:comment "An altered purine requirement phenotype where an organism's requirement for a purine base is decreased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007075 , obo:OMP_0007081 .
obo:OMP_0000256 a rdfs:Class ;
rdfs:label "MacConkey agar phenotype" ;
rdfs:comment """A colony morphology phenotype that describes the appearance of colonies on MacConkey agar indicator medium.
** This term was made obsolete because the appearance of colonies on MacConkey agar was determined to be evidence for a phenotype rather than a phenotype itself.""" .
obo:GO_0044464 a rdfs:Class ;
rdfs:label "cell part" ;
rdfs:comment "Any constituent part of a cell, the basic structural and functional unit of all organisms." ;
rdfs:subClassOf obo:GO_0005575 .
obo:BFO_0000050 a rdf:Property ;
rdfs:label "part_of" ;
rdfs:comment "X part_of Y if X is a subregion of Y." ;
rdfs:range .
obo:OMP_0007376 a rdfs:Class ;
rdfs:label "increased resistance to alkylating agent" ;
rdfs:comment "An altered resistance to an alkylating agent phenotype where growth and reproduction of a microbe in the presence of an alkylating agent is increased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007375 .
obo:OMP_0007429 a rdfs:Class ;
rdfs:label "increased asexual spore formation" ;
rdfs:comment "An altered asexual sporulation phenotype where the rate, frequency, timing, or extent of the process of forming asexual (mitotic) spores is increased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007145 .
obo:OMP_0007562 a rdfs:Class ;
rdfs:label "presence of meiotic nuclear division" ;
rdfs:comment "A meiotic nuclear division phenotype in which both the first and second meiotic nuclear divisions occur." ;
rdfs:subClassOf obo:OMP_0007561 .
obo:PATO_0001159 a rdfs:Class ;
rdfs:label "concentrated" ;
rdfs:comment "A concentration quality inhering in a bearer by virtue of the bearer's exhibiting concentration." ;
rdfs:subClassOf obo:PATO_0000033 .
obo:OMP_0006115 a rdfs:Class ;
rdfs:label "abolished gene expression" ;
rdfs:comment "A decreased gene expression phenotype where expression of a gene or genes is abolished relative to a designated control." ;
rdfs:subClassOf obo:OMP_0000268 .
obo:OMP_0007354 a rdfs:Class ;
rdfs:label "altered amino acid requirement" ;
rdfs:comment "An altered growth factor requirement phenotype where the requirement for an amino acid in the growth medium is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007038 , obo:OMP_0007079 .
obo:OMP_0006084 a rdfs:Class ;
rdfs:label "oxidase negative" ;
rdfs:comment "An oxidase test phenotype where an organism doesn't exhibit oxidase activity." ;
rdfs:subClassOf obo:OMP_0000220 .
obo:GO_0032502 a rdfs:Class ;
rdfs:label "developmental process" ;
rdfs:comment "A biological process whose specific outcome is the progression of an integrated living unit: an anatomical structure (which may be a subcellular structure, cell, tissue, or organ), or organism over time from an initial condition to a later condition." ;
rdfs:subClassOf obo:GO_0008150 .
obo:PATO_0000617 a rdfs:Class ;
rdfs:label "bent" ;
rdfs:comment "A shape quality inhering in a bearer by virtue of the bearer's having one or more angle(s) in its length." ;
rdfs:subClassOf obo:PATO_0000052 .
obo:OMP_0000303 a rdfs:Class ;
rdfs:label "altered correlation between nucleoid and cell constriction during cell division" ;
rdfs:subClassOf obo:OMP_0000347 .
obo:OMP_0007964 a rdfs:Class ;
rdfs:label "cell population growth during nutrient limitation phenotype" ;
rdfs:comment "A cell population growth phenotype related to the rate or extent of growth of a microbial population under conditions of limitation for an essential nutrient (i.e. conditions where an essential nutrient is present at low concentration)." ;
rdfs:subClassOf obo:OMP_0007794 .
obo:OMP_0000437 a rdfs:Class ;
rdfs:label "resistant to ampicillin" ;
rdfs:comment "An antimicrobial compound resistance phenotype where a cell or cells are resistant to ampicillin." .
obo:OMP_0005037 a rdfs:Class ;
rdfs:label "origin-independent replication" ;
rdfs:comment "A DNA replication phenotype in which replication of the chromosome(s) is independent of the origin of replication." ;
rdfs:subClassOf obo:OMP_0007147 .
obo:OMP_0007997 a rdfs:Class ;
rdfs:label "decreased cell surface area variability" ;
rdfs:subClassOf obo:OMP_0007996 .
obo:PATO_0000169 a rdfs:Class ;
rdfs:label "viability" ;
rdfs:comment "An organismal quality inhering in a bearer or a population by virtue of the bearer's disposition to survive and develop normally or the number of surviving individuals in a given population." ;
rdfs:subClassOf obo:PATO_0001995 .
obo:OMP_0005135 a rdfs:Class ;
rdfs:label "abolished resistance to SDS-EDTA stress" ;
rdfs:comment "A decreased SDS-EDTA stress phenotype where the resistance that microbes in a population show when exposed to SDS-EDTA is abolished." ;
rdfs:subClassOf obo:OMP_0005113 .
obo:OMP_0005285 a rdfs:Class ;
rdfs:label "increased colonization of host tissue" ;
rdfs:comment "An altered colonization of host tissue phenotype where the frequency, rate, timing, or extent of colonization of a host tissue is increased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0005284 .
obo:OMP_0000379 a rdfs:Class ;
rdfs:label "presence of acid tolerance response" ;
rdfs:subClassOf obo:OMP_0000376 .
obo:OMP_0006026 a rdfs:Class ;
rdfs:label "nitrogen source utilization phenotype" ;
rdfs:comment "A nutrient utilization phenotype where the nutrient is being utilized as a source of nitrogen." ;
rdfs:subClassOf obo:OMP_0006022 .
obo:OMP_0006172 a rdfs:Class ;
rdfs:label "increased antimicrobial peptide production" ;
rdfs:comment "An antimicrobial peptide production phenotype where the amount of antimicrobial peptide produced is increased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0006106 .
obo:OMP_0005149 a rdfs:Class ;
rdfs:label "absence of ferric reductase activity" ;
rdfs:comment "A ferric reductase phenotype where an organism does not exhibit ferric reductase activity." ;
rdfs:subClassOf obo:OMP_0005148 .
obo:OMP_0007690 a rdfs:Class ;
rdfs:label "abolished cell growth" ;
rdfs:comment "A decreased cell growth phenotype where cell growth is abolished." ;
rdfs:subClassOf obo:OMP_0007686 , obo:OMP_0007688 .
obo:OMP_0007523 a rdfs:Class ;
rdfs:label "altered population growth range" ;
rdfs:comment "A population growth range phenotype where the rate and/or extent of growth of a microbial population in a specified environmental condition is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007157 , obo:OMP_0007192 .
obo:OMP_0005268 a rdfs:Class ;
rdfs:label "absence of endocytosis" ;
rdfs:comment "An endocytosis phenotype where an organism, cell, or cells lacks the ability to perform endocytosis." ;
rdfs:subClassOf obo:OMP_0005261 .
obo:OMP_0007885 a rdfs:Class ;
rdfs:label "not resistant to a metal" ;
rdfs:comment "A metal resistance phenotype where growth and reproduction of a microbe doesn't occur in the presence of a metal." ;
rdfs:subClassOf obo:OMP_0007246 , obo:OMP_0007890 .
obo:OMP_0006133 a rdfs:Class ;
rdfs:label "abolished purine requirement" ;
rdfs:comment "A decreased purine requirement phenotype where the requirement for a purine base as a growth factor is abolished." ;
rdfs:subClassOf obo:OMP_0007022 .
obo:OMP_0000331 a rdfs:Class ;
rdfs:label "aminopyrimidine resistance phenotype" ;
rdfs:comment "An antimicrobial agent resistance phenotype related to resistance or sensitivity to aminopyrimidine compounds." ;
rdfs:subClassOf obo:OMP_0000274 .
obo:OMP_0005032 a rdfs:Class ;
rdfs:label "presence of stress-induced mutagenesis" ;
rdfs:comment "A stress-induced mutagenesis phenotype where a cell or cells exhibit stress-induced mutagenesis." ;
rdfs:subClassOf obo:OMP_0005027 .
obo:OMP_0007290 a rdfs:Class ;
rdfs:label "decreased laccase activity" ;
rdfs:comment "An altered laccase activity phenotype where laccase activity is decreased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007288 .
obo:OMP_0007317 a rdfs:Class ;
rdfs:label "abolished protein kinase A activity" ;
rdfs:comment "A decreased protein kinase A activity phenotype where the activity is abolished." ;
rdfs:subClassOf obo:OMP_0005155 , obo:OMP_0005157 .
obo:OMP_0007158 a rdfs:Class ;
rdfs:label "altered response to stress phenotype" ;
rdfs:comment "A response to stress response phenotype where the change in state or activity of a microbe (in terms of movement, secretion, enzyme production, gene expression, etc.) that occurs as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation) is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0000173 , obo:OMP_0007157 .
obo:GO_0071976 a rdfs:Class ;
rdfs:label "cell gliding" ;
rdfs:comment "Cell motility that results in the smooth movement of a cell along a solid surface." ;
rdfs:subClassOf obo:GO_0048870 .
obo:OMP_0005061 a rdfs:Class ;
rdfs:label "increased frequency of chromosome missegregation" ;
rdfs:comment "An altered chromosome segregation phenotype where the frequency of chromosome missegregation is increased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0006001 .
obo:OMP_0005315 a rdfs:Class ;
rdfs:label "abolished colonization of rabbit tissue" ;
rdfs:comment "A decreased colonization of rabbit tissue phenotype where the colonization of rabbit tissue is abolished." ;
rdfs:subClassOf obo:OMP_0005311 , obo:OMP_0005314 .
obo:OMP_0000061 a rdfs:Class ;
rdfs:label "decreased virulence" ;
rdfs:comment "An altered virulence phenotype where the rate, frequency, timing, or extent of the ability of a microbe to cause disease in another organism (the host) is decreased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0000098 .
obo:PATO_0001561 a rdfs:Class ;
rdfs:label "having extra processual parts" ;
rdfs:comment "A quality of a process inhering in a bearer by virtue of the bearer's having additional processual parts." ;
rdfs:subClassOf obo:PATO_0001564 .
obo:OMP_0008046 a rdfs:Class ;
rdfs:label "altered plaque size phenotype" ;
rdfs:comment "A bacteriophage plaque morphology phenotype where the size of viral plaque is altered relative to a designated control." .
obo:OMP_0007186 a rdfs:Class ;
rdfs:label "abolished anaerobic respiration" ;
rdfs:comment "A decreased anaerobic respiration phenotype where the ability to perform anaerobic respiration is abolished." ;
rdfs:subClassOf obo:OMP_0007182 , obo:OMP_0007185 .
obo:OMP_0007640 a rdfs:Class ;
rdfs:label "abolished cell wall protein level" ;
rdfs:comment "A decreased cell wall protein level phenotype where the amount of cell wall protein is abolished." ;
rdfs:subClassOf obo:OMP_0007639 .
obo:OMP_0005124 a rdfs:Class ;
rdfs:label "altered resistance to x-ray radiation" ;
rdfs:comment "A resistance to x-ray radiation phenotype where the resistance or sensitivity that microbes in a population show when exposed to x-rays is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0005086 , obo:OMP_0007594 .
obo:OMP_0000088 a rdfs:Class ;
rdfs:label "filamentous colony" ;
rdfs:comment "A colony form phenotype characterized by growth of thin individual projections in the colony." ;
rdfs:subClassOf obo:OMP_0000103 .
obo:OMP_0005352 a rdfs:Class ;
rdfs:label "altered mating" ;
rdfs:comment "A mating phenotype where the frequency, rate, timing, or extent of sexual reproduction by conjugation is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007412 .
obo:PATO_0000718 a rdfs:Class ;
rdfs:label "lethal (sensu genetics)" ;
rdfs:comment "A viability quality inhering in a population by virtue of the bearer's long term survival inability." ;
rdfs:subClassOf obo:PATO_0000169 .
obo:OMP_0007813 a rdfs:Class ;
rdfs:label "presence of cellular pigment accumulation during vegetative growth" ;
rdfs:comment "A cellular process phenotype observed during the vegetative growth phase of the life cycle where a cell or cells of a microorganism accumulate pigment." ;
rdfs:subClassOf obo:OMP_0007812 .
obo:OMP_0006144 a rdfs:Class ;
rdfs:label "abolished resistance to macrolide" ;
rdfs:comment "A decreased resistance to macrolide phenotype where resistance to macrolides is abolished." ;
rdfs:subClassOf obo:OMP_0006036 , obo:OMP_0006038 .
obo:OMP_0005367 a rdfs:Class ;
rdfs:label "absence of negative osmotaxis" ;
rdfs:comment "An absence of osmotaxis phenotype where an organism doesn't display negative osmotaxis." ;
rdfs:subClassOf obo:OMP_0005363 .
obo:OMP_0007928 a rdfs:Class ;
rdfs:label "commonly used descriptors" ;
rdfs:comment "Microbial taxa are commonly described in terms of phenotypic characteristics that are shared by all or almost all members of a particular taxonomic group." ;
rdfs:subClassOf obo:OMP_0000000 .
obo:OMP_0000450 a rdfs:Class ;
rdfs:label "trace element utilization phenotype" ;
rdfs:comment "A nutrient utilization phenotype that is related to utilization of chemical elements required by living organisms in minute amounts." ;
rdfs:subClassOf obo:OMP_0006022 .
obo:OMP_0007343 a rdfs:Class ;
rdfs:label "altered autophagy" ;
rdfs:comment "An autophagy phenotype where autophagy in a cell or cells is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007333 , obo:OMP_0007342 .
obo:OMP_0007449 a rdfs:Class ;
rdfs:label "abolished lethality in immunocompromised mice" ;
rdfs:comment "A decreased lethality phenotype where the ability of an infectious microbe to cause death of its immunocompromised murine host is abolished." ;
rdfs:subClassOf obo:OMP_0007399 , obo:OMP_0007447 .
obo:OMP_0005173 a rdfs:Class ;
rdfs:label "acid phosphatase activity phenotype" ;
rdfs:comment "An enzymatic activity phenotype that relates to the presence or absence of acid phosphatase, an enzyme that removes phosphoryl groups from other molecules. Acid phosphatase catalyzes the reaction: an orthophosphoric monoester + H2O -> an alcohol + phosphate, with an acid pH optimum." ;
rdfs:subClassOf obo:OMP_0000221 .
obo:OMP_0007945 a rdfs:Class ;
rdfs:label "presence of population growth at acidic pH" ;
rdfs:comment "A population growth phenotype where a microbial population is able to grow and reproduce at acidic pH (pH< 7)." ;
rdfs:subClassOf obo:OMP_0005008 .
obo:OMP_0007253 a rdfs:Class ;
rdfs:label "presence of colonization of a host" ;
rdfs:comment "A colonization of a host phenotype where a microbe is able to colonize a host organism." ;
rdfs:subClassOf obo:OMP_0007252 .
obo:OMP_0000031 a rdfs:Class ;
rdfs:label "altered flagellum shape" ;
rdfs:comment "An altered flagellum phenotype where the shape of the flagellum is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007105 .
obo:OMP_0007826 a rdfs:Class ;
rdfs:label "abolished resistance to nitrofuran" ;
rdfs:comment "An altered nitrofuran resistance phenotype where resistance to a nitrofuran compound is abolished." ;
rdfs:subClassOf obo:OMP_0007823 , obo:OMP_0007825 .
obo:OMP_0000461 a rdfs:Class ;
rdfs:label "outer membrane phenotype" ;
rdfs:comment "A cell envelope phenotype where the trait in question is the presence or absence of a lipid bilayer membrane located outside the peptidoglycan cell wall." ;
rdfs:subClassOf obo:OMP_0000085 .
obo:OMP_0007573 a rdfs:Class ;
rdfs:label "resistance to pH shock phenotype" ;
rdfs:comment "A resistance to stress phenotype related to the resistance or sensitivity that a microbial population shows when exposed to environmental pH at or below 6.5." ;
rdfs:subClassOf obo:OMP_0007568 .
obo:OMP_0000267 a rdfs:Class ;
rdfs:label "increased gene expression" ;
rdfs:comment "An altered gene expression phenotype where expression of a gene or genes is increased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007080 .
obo:OMP_0005214 a rdfs:Class ;
rdfs:label "absence of adhesion" ;
rdfs:comment "An adhesion phenotype where a microbe lacks the ability to attach to a substrate in the environment or in a host, either directly or indirectly." ;
rdfs:subClassOf obo:OMP_0005205 .
obo:OMP_0007959 a rdfs:Class ;
rdfs:label "increased population growth at low temperature" ;
rdfs:subClassOf obo:OMP_0007958 .
obo:OMP_0000162 a rdfs:Class ;
rdfs:label "convex colony elevation" ;
rdfs:comment "A colony elevation phenotype characterized by sloping up from the edges." ;
rdfs:subClassOf obo:OMP_0000104 .
obo:OMP_0007462 a rdfs:Class ;
rdfs:label "colonization of invertebrate host phenotype" ;
rdfs:comment "A microbe-host interaction phenotype relating to the ability of a microbe to colonize an invertebrate host." ;
rdfs:subClassOf obo:OMP_0007252 .
obo:OMP_0005392 a rdfs:Class ;
rdfs:label "absence of tail" ;
rdfs:comment "A tail morphology phenotype where the virus has no tail." ;
rdfs:subClassOf obo:OMP_0005382 .
obo:OMP_0007999 a rdfs:Class ;
rdfs:label "altered cell surface area-to-volume ratio" ;
rdfs:subClassOf obo:OMP_0000330 , obo:OMP_0007083 .
obo:OMP_0000099 a rdfs:Class ;
rdfs:label "hemolysis test" ;
rdfs:comment "A differential test phenotype that describes whether a cell or cells exhibits the ability to lyse red blood cells." ;
rdfs:subClassOf obo:OMP_0007130 .
obo:OMP_0005252 a rdfs:Class ;
rdfs:label "altered aerobic population growth" ;
rdfs:comment "A population growth range phenotype where the ability of a microbial population to growth in the presence of atmospheric levels of oxygen gas (approximately 20% O2) is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0005250 .
obo:GO_0048869 a rdfs:Class ;
rdfs:label "cellular developmental process" ;
rdfs:comment "A biological process whose specific outcome is the progression of a cell over time from an initial condition to a later condition." ;
rdfs:subClassOf obo:GO_0044763 , obo:GO_0044767 .
obo:OMP_0005043 a rdfs:Class ;
rdfs:label "site-specific recombination phenotype" ;
rdfs:comment "A genetic material phenotype where there is non-homologous recombination at a particular sequence of DNA." ;
rdfs:subClassOf obo:OMP_0000290 .
obo:OMP_0007956 a rdfs:Class ;
rdfs:label "presence of population growth at low temperature" ;
rdfs:subClassOf obo:OMP_0005002 .
obo:OMP_0006111 a rdfs:Class ;
rdfs:label "abolished chromosome segregation" ;
rdfs:comment "A altered chromosome segregation phenotype where the ability to partition a set of chromosomes to daughter cells is abolished." ;
rdfs:subClassOf obo:OMP_0005060 , obo:OMP_0007601 .
obo:OMP_0007548 a rdfs:Class ;
rdfs:label "abolished haploid fruiting" ;
rdfs:comment "A decreased haploid fruiting phenotype where the process of haploid fruiting is abolished." ;
rdfs:subClassOf obo:OMP_0007544 , obo:OMP_0007547 .
obo:OMP_0005155 a rdfs:Class ;
rdfs:label "absence of protein kinase A activity" ;
rdfs:comment "A protein kinase A phenotype where an organism does not exhibit protein kinase A activity." ;
rdfs:subClassOf obo:OMP_0005154 .
obo:GO_0040007 a rdfs:Class ;
rdfs:label "growth" ;
rdfs:comment "The increase in size or mass of an entire organism, a part of an organism or a cell." ;
rdfs:subClassOf obo:GO_0008150 .
obo:OMP_0005274 a rdfs:Class ;
rdfs:label "organic heterocyclic compound resistance phenotype" ;
rdfs:comment "An antimicrobial agent resistance phenotype related to resistance or sensitivity to an organic heterocyclic compound, which is any cyclic compound having as ring members atoms of carbon and at least of one other element." ;
rdfs:subClassOf obo:OMP_0000274 .
obo:OMP_0000066 a rdfs:Class ;
rdfs:label "abolished virulence" ;
rdfs:comment "A decreased virulence phenotype where rate, frequency, timing, or extent of the ability of a microbe to cause disease in a host is abolished." ;
rdfs:subClassOf obo:OMP_0000061 , obo:OMP_0000065 .
obo:OMP_0007511 a rdfs:Class ;
rdfs:label "ascospore morphology phenotype" ;
rdfs:comment "A spore morphology phenotype that is related to the form and structure of an ascospore, which is a thick-walled spore that stores and protects one or more nuclei following sexual reproduction in an Ascomycete." ;
rdfs:subClassOf obo:OMP_0008000 .
obo:OMP_0005279 a rdfs:Class ;
rdfs:label "not resistant to organic heterocyclic compound" ;
rdfs:comment "An organic heterocyclic compound resistance phenotype where an organism or cell is sensitive to an organic heterocyclic compound." ;
rdfs:subClassOf obo:OMP_0005274 .
obo:OMP_0007720 a rdfs:Class ;
rdfs:label "decreased vegetative cell volume" ;
rdfs:comment "An altered cell size phenotype in which the volume of a cell in the vegetative growth phase of the life cycle is decreased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007713 , obo:OMP_0007719 .
obo:OMP_0007689 a rdfs:Class ;
rdfs:label "increased cell growth" ;
rdfs:comment "An altered cell growth phenotype where the rate, timing, or extent of cell growth is increased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007687 .
obo:OMP_0007863 a rdfs:Class ;
rdfs:label "presence of resistance to bicyclomycin" .
obo:PATO_0000117 a rdfs:Class ;
rdfs:label "size" ;
rdfs:comment "A morphology quality inhering in a bearer by virtue of the bearer's physical magnitude." ;
rdfs:subClassOf obo:PATO_0000051 .
obo:OMP_0007112 a rdfs:Class ;
rdfs:label "respiration phenotype" ;
rdfs:comment "An energy metabolism phenotype where electrons from an oxidized chemical are transferred via an electron transport chain to an exogenous electron acceptor." ;
rdfs:subClassOf obo:OMP_0000224 .
obo:OMP_0005190 a rdfs:Class ;
rdfs:label "presence of anaerobic population growth" ;
rdfs:comment "A population growth range phenotype where a microbial population is able to grow in the absence of oxygen." ;
rdfs:subClassOf obo:OMP_0005189 .
obo:OMP_0005341 a rdfs:Class ;
rdfs:label "abolished cell lysis" ;
rdfs:comment "A decreased cell lysis phenotype where cytolysis is abolished." ;
rdfs:subClassOf obo:OMP_0005340 .
obo:OMP_0006015 a rdfs:Class ;
rdfs:label "presence of transposable element transposition" ;
rdfs:comment "A transposable element transposition phenotype where a cell or cells have transposition of transposable elements." ;
rdfs:subClassOf obo:OMP_0005059 .
obo:OMP_0000224 a rdfs:Class ;
rdfs:label "energy metabolism phenotype" ;
rdfs:comment "A metabolic phenotype that deals with the specific process an organism uses to produce energy carriers." ;
rdfs:subClassOf obo:OMP_0000180 .
obo:OMP_0000249 a rdfs:Class ;
rdfs:label "decreased hemolysis" ;
rdfs:comment "An altered hemolysis phenotype where hemolysis is decreased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0000206 .
obo:PATO_0000586 a rdfs:Class ;
rdfs:label "increased size" ;
rdfs:comment "A size quality which is relatively high." ;
rdfs:subClassOf obo:PATO_0000117 , obo:PATO_0002305 .
obo:OMP_0006067 a rdfs:Class ;
rdfs:label "decreased resistance to chloramphenicol" ;
rdfs:comment "A chloramphenicol compound resistance phenotype where resistance to a chloramphenicol compound is decreased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0006025 .
obo:OMP_0007321 a rdfs:Class ;
rdfs:label "altered mucoid colony phenotype" ;
rdfs:comment "A mucoid colony phenotype where the mucoid or nonmucoid appearance of colonies is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007319 .
obo:OMP_0007559 a rdfs:Class ;
rdfs:label "clamp connection morphology phenotype" ;
rdfs:subClassOf obo:OMP_0007556 .
obo:OMP_0007400 a rdfs:Class ;
rdfs:label "increased lethality" ;
rdfs:comment "An altered lethality phenotype where the ability of an infectious microbe to cause death of the host is increased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007397 .
obo:OMP_0007078 a rdfs:Class ;
rdfs:label "altered carbon source utilization" ;
rdfs:comment "An altered nutrient utilization phenotype where the ability of a microbe to utilize a nutrient as the source of carbon is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0006023 , obo:OMP_0007104 .
obo:PATO_0000592 a rdfs:Class ;
rdfs:label "decreased thickness" ;
rdfs:comment "A thickness which is relatively low." ;
rdfs:subClassOf obo:PATO_0000587 , obo:PATO_0000915 .
obo:OMP_0007858 a rdfs:Class ;
rdfs:label "altered fosfomycin resistance" ;
rdfs:comment "A fosfomycin resistance phenotype where the ability of a microbe to grow and reproduce in the presence of fosfomycin is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007134 , obo:OMP_0007847 .
obo:OMP_0000025 a rdfs:Class ;
rdfs:label "altered cell surface area-to-volume ratio variability" ;
rdfs:subClassOf obo:OMP_0007918 , obo:OMP_0007999 .
obo:OMP_0007534 a rdfs:Class ;
rdfs:label "resistant to a urea derivative" ;
rdfs:comment "A ureas resistance phenotype where a microbe is resistant to a derivative of urea." .
obo:OMP_0007500 a rdfs:Class ;
rdfs:label "decreased resistance to an epoxide" ;
rdfs:comment "An altered epoxide resistance phenotype where the frequency, rate, timing, or extent of resistance to an epoxide is decreased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007498 .
obo:OMP_0007164 a rdfs:Class ;
rdfs:label "translation regulation phenotype" ;
rdfs:comment "A gene expression regulation phenotype that affects the regulation of translation." ;
rdfs:subClassOf obo:OMP_0007162 .
obo:OMP_0007802 a rdfs:Class ;
rdfs:label "increased vegetative cell population growth rate" ;
rdfs:subClassOf obo:OMP_0007801 .
obo:OMP_0000163 a rdfs:Class ;
rdfs:label "pulvinate colony elevation" ;
rdfs:comment "A colony elevation phenotype characterized by sloping steeply from edges and very high in the center." ;
rdfs:subClassOf obo:OMP_0000104 .
obo:OMP_0000364 a rdfs:Class ;
rdfs:label "cell surface area-to-volume ratio variability phenotype" ;
rdfs:subClassOf obo:OMP_0007917 .
obo:OMP_0007148 a rdfs:Class ;
rdfs:label "cytokinesis phenotype" ;
rdfs:comment "A cell cycle phenotype related to the process in a proliferating cell or organism in which the cytoplasm and cell envelope are separation into two or more daughter cells." ;
rdfs:subClassOf obo:OMP_0005115 .
obo:OMP_0007895 a rdfs:Class ;
rdfs:label "increased resistance to a surfactant" ;
rdfs:comment "An altered surfactant resistance phenotype where growth and reproduction of a microbe in the presence of a surfactant is increased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007894 .
obo:OMP_0007898 a rdfs:Class ;
rdfs:label "bile acids resistance phenotype" ;
rdfs:comment "A chemical resistance phenotype relating to the resistance or sensitivity of growth and reproduction of a microbial population to bile acids." ;
rdfs:subClassOf obo:OMP_0007195 .
obo:OMP_0005026 a rdfs:Class ;
rdfs:label "presence of phospholipase activity" ;
rdfs:comment "A phospholipase activity phenotype where an organism exhibits phospholipase activity." ;
rdfs:subClassOf obo:OMP_0005000 .
obo:OMP_0007029 a rdfs:Class ;
rdfs:label "decreased utilization of dinitrogen" ;
rdfs:comment "A dinitrogen (N2) utilization phenotype where the ability to use N2 as a nitrogen source is decreased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007190 .
obo:OMP_0000274 a rdfs:Class ;
rdfs:label "antimicrobial agent resistance phenotype" ;
rdfs:comment "A microbial phenotype related to the resistance or sensitivity of a microbe to antimicrobial agents that kill (microbiocidal) or inhibit growth (microbiostatic) of a microbe." ;
rdfs:subClassOf obo:OMP_0000000 , obo:OMP_0007195 .
obo:OMP_0005110 a rdfs:Class ;
rdfs:label "abolished phospholipase activity" ;
rdfs:comment "A decreased phospholipase activity phenotype where phospholipase activity is abolished." ;
rdfs:subClassOf obo:OMP_0005019 , obo:OMP_0005063 .
obo:OMP_0005203 a rdfs:Class ;
rdfs:label "decreased alpha-1,3-mannosyltransferase activity" ;
rdfs:comment "An altered alpha-1,3-mannosyltransferase activity phenotype where alpha-1,3- mannosyltransferase activity is decreased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0005201 .
obo:OMP_0000184 a rdfs:Class ;
rdfs:label "obligate anaerobe" ;
rdfs:comment "A microbial phenotype that describes a microorganism that does not grow in the presence of oxygen gas (O2)." ;
rdfs:subClassOf obo:OMP_0007928 .
obo:OMP_0005263 a rdfs:Class ;
rdfs:label "increased endocytosis" ;
rdfs:comment "An altered endocytosis phenotype where the frequency, rate, timing, or extent of endocytosis is increased relative to a designated control. A phenotype may affect endocytosis of all cargoes, or of specific cargo such as a particular protein." ;
rdfs:subClassOf obo:OMP_0005262 .
obo:OMP_0005184 a rdfs:Class ;
rdfs:label "presence of actin cytoskeleton" ;
rdfs:comment "An actin cytoskeleton phenotype where a microbial cell or cells exhibit an actin cytoskeleton." ;
rdfs:subClassOf obo:OMP_0007758 .
obo:OMP_0007837 a rdfs:Class ;
rdfs:label "nonviable spore" ;
rdfs:comment "A cell viability phenotype in which a microbial spore is unable to survive under the specified conditions. A nonviable spore does not germinate." ;
rdfs:subClassOf obo:OMP_0007835 .
obo:OMP_0007953 a rdfs:Class ;
rdfs:label "increased population growth at high temperature" ;
rdfs:subClassOf obo:OMP_0007952 .
obo:OMP_0007455 a rdfs:Class ;
rdfs:label "survival in macrophage phenotype" ;
rdfs:subClassOf obo:OMP_0000197 .
obo:OMP_0007588 a rdfs:Class ;
rdfs:label "decreased resistance to cold shock" ;
rdfs:comment "An altered resistance to cold phenotype where the resistance of microbes in a population to temperatures below the optimal growth temperature is decreased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007582 .
obo:PATO_0001018 a rdfs:Class ;
rdfs:label "physical quality" ;
rdfs:comment "A quality of a physical entity that exists through action of continuants at the physical level of organisation in relation to other entities." ;
rdfs:subClassOf obo:PATO_0001241 .
obo:OMP_0006062 a rdfs:Class ;
rdfs:label "tetracycline resistance phenotype" ;
rdfs:comment "An antimicrobial compound resistance phenotype related to resistance or sensitivity to tetracyclines: a subclass of polyketides having an octahydrotetracene-2-carboxamide skeleton." ;
rdfs:subClassOf obo:OMP_0000274 .
obo:OMP_0007988 a rdfs:Class ;
rdfs:label "increased cell area variability" ;
rdfs:subClassOf obo:OMP_0007984 .
obo:OMP_0007731 a rdfs:Class ;
rdfs:label "abolished vegetative cell population viability" ;
rdfs:comment "An altered vegetative cell population viability phenotype where the viability of vegetative cells is abolished." ;
rdfs:subClassOf obo:OMP_0007730 .
obo:PATO_0001309 a rdfs:Class ;
rdfs:label "duration" ;
rdfs:comment "A process quality inhering in a bearer by virtue of the bearer's magnitude of the temporal extent between the starting and ending point." ;
rdfs:subClassOf obo:PATO_0002062 .
obo:GO_0032196 a rdfs:Class ;
rdfs:label "transposition" ;
rdfs:comment "Any process involved in mediating the movement of discrete segments of DNA between nonhomologous sites." ;
rdfs:subClassOf obo:GO_0044763 .
obo:OMP_0007869 a rdfs:Class ;
rdfs:label "A22 antimicrobial agent resistance phenotype" ;
rdfs:comment """The original term and its children were deemed to be too granular and replaced with OMP:0000274 ! antimicrobial agent resistance phenotype and its child terms, which are listed below. When using one of these terms for annotation, enter a database identifier for the specific antimicrobial agent in the Annotation Extension field.
OMP:0007876 resistant to an antimicrobial agent
OMP:0007877 not resistant to an antimicrobial agent
OMP:0007134 altered resistance to an antimicrobial agent
OMP:0007878 increased resistance to an antimicrobial agent
OMP:000 7879 decreased resistance to an antimicrobial agent
OMP:0007880 abolished resistance to an antimicrobial agent""" .
obo:OMP_0007829 a rdfs:Class ;
rdfs:label "resistant to sulfonamide antimicrobial agent" ;
rdfs:comment "A sulfonamide antimicrobial agent resistance phenotype where growth and reproduction of a microbe is not affected by the presence of a sulfonamide antimicrobial agent." ;
rdfs:subClassOf obo:OMP_0007828 .
obo:PATO_0001396 a rdfs:Class ;
rdfs:label "cellular quality" ;
rdfs:comment "A monadic quality of continuant that exists at the cellular level of organisation." ;
rdfs:subClassOf obo:PATO_0001241 .
obo:OMP_0007179 a rdfs:Class ;
rdfs:label "decreased aerobic respiration" ;
rdfs:comment "An altered aerobic respiration phenotype where the ability to perform aerobic respiration is decreased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007177 .
obo:OMP_0006166 a rdfs:Class ;
rdfs:label "presence of binary fission" ;
rdfs:comment "A binary fission phenotype where an organism multiplies by the process of binary fission." ;
rdfs:subClassOf obo:OMP_0007067 .
obo:GO_0040011 a rdfs:Class ;
rdfs:label "locomotion" ;
rdfs:comment "Self-propelled movement of a cell or organism from one location to another." ;
rdfs:subClassOf obo:GO_0008150 .
obo:OMP_0007948 a rdfs:Class ;
rdfs:label "absence of growth at alkaline pH" ;
rdfs:comment "A population growth phenotype where a microbial population isn't able to grow and reproduce at alkaline pH (pH>7)." .
obo:OMP_0005050 a rdfs:Class ;
rdfs:label "decreased frequency of homologous recombination" ;
rdfs:comment "A homologous recombination phenotype where homologous recombination is decreased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0006002 .
obo:OMP_0007231 a rdfs:Class ;
rdfs:label "presence of an exosporium" ;
rdfs:comment "An endospore exosporium phenotype where an exosporium is present as a component of the mature endospore." ;
rdfs:subClassOf obo:OMP_0007230 .
obo:OMP_0005001 a rdfs:Class ;
rdfs:label "altered caffeine resistance" ;
rdfs:comment "A caffeine resistance phenotype that is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0000456 , obo:OMP_0007137 .
obo:OMP_0006150 a rdfs:Class ;
rdfs:label "abolished utilization of inorganic nitrogen" ;
rdfs:comment "A decreased utilization of inorganic nitrogen phenotype where an organism loses the ability to utilize inorganic nitrogen." ;
rdfs:subClassOf obo:OMP_0007032 , obo:OMP_0007307 .
obo:OMP_0000020 a rdfs:Class ;
rdfs:label "presence of myxospore formation" ;
rdfs:comment "A myxospore formation phenotype where an organism possesses the ability to form myxospores." ;
rdfs:subClassOf obo:OMP_0000096 , obo:OMP_0007143 .
obo:GO_0006725 a rdfs:Class ;
rdfs:label "cellular aromatic compound metabolic process" ;
rdfs:comment "The chemical reactions and pathways involving aromatic compounds, any organic compound characterized by one or more planar rings, each of which contains conjugated double bonds and delocalized pi electrons, as carried out by individual cells." ;
rdfs:subClassOf obo:GO_0044237 .
obo:OMP_0007141 a rdfs:Class ;
rdfs:label "presence of schizogeny" ;
rdfs:comment "A schizogeny phenotype where an organism reproduces by the process of schizogeny." ;
rdfs:subClassOf obo:OMP_0006173 , obo:OMP_0007140 .
obo:OMP_0007843 a rdfs:Class ;
rdfs:label "absence of germ tube" ;
rdfs:comment "A cell morphology phenotype where a germinating microbial spore lacks a germ tube." ;
rdfs:subClassOf obo:OMP_0007738 .
obo:OMP_0007277 a rdfs:Class ;
rdfs:label "cell wall morphology phenotype" ;
rdfs:comment "This term was made obsolete because it is a duplicate of OMP:0005233. A cell envelope morphology phenotype where the trait in question is the cell wall, a rigid or semi-rigid layer that surrounds the plasma membrane and maintains cell shape and helps protect against osmotic lysis." .
obo:OMP_0000353 a rdfs:Class ;
rdfs:label "timing of nucleoid separation phenotype" ;
rdfs:subClassOf obo:OMP_0000349 .
obo:OMP_0005390 a rdfs:Class ;
rdfs:label "presence of a single tail" ;
rdfs:comment "A phage tail phenotype where only one tail per virion is present." ;
rdfs:subClassOf obo:OMP_0005383 .
obo:OMP_0006151 a rdfs:Class ;
rdfs:label "abolished utilization of inorganic phosphorus" ;
rdfs:comment "A decreased utilization of inorganic phosphorus phenotype where the ability to utilize inorganic phosphorus is abolished." ;
rdfs:subClassOf obo:OMP_0007047 .
obo:PATO_0000628 a rdfs:Class ;
rdfs:label "mislocalised" ;
rdfs:comment "A positional quality inhering in a bearer by virtue the bearer's being changed in abnormal position." ;
rdfs:subClassOf obo:PATO_0002181 .
obo:OMP_0007217 a rdfs:Class ;
rdfs:label "not resistant to rifamycin" ;
rdfs:comment "A rifamycin resistance phenotype where an organism or cell is sensitive to one or more rifamycins." ;
rdfs:subClassOf obo:OMP_0007215 .
obo:OMP_0005121 a rdfs:Class ;
rdfs:label "altered resistance to freeze/thaw stress" ;
rdfs:comment "A resistance to freeze/thawing stress phenotype where the resistance or sensitivity that microbes in a population show when exposed to cycles of freezing and thawing is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007572 , obo:OMP_0007593 .
obo:OMP_0007425 a rdfs:Class ;
rdfs:label "absence of schizogeny" ;
rdfs:comment "A schizogeny phenotype where an organism does not reproduce by the process of schizogeny." ;
rdfs:subClassOf obo:OMP_0007140 , obo:OMP_0007235 .
obo:OMP_0000035 a rdfs:Class ;
rdfs:label "malformed pilus" ;
rdfs:comment "A pilus phenotype where the cell possesses a pilus that was distorted during formation." ;
rdfs:subClassOf obo:OMP_0006010 .
obo:GO_0060255 a rdfs:Class ;
rdfs:label "regulation of macromolecule metabolic process" ;
rdfs:comment "Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving macromolecules, any molecule of high relative molecular mass, the structure of which essentially comprises the multiple repetition of units derived, actually or conceptually, from molecules of low relative molecular mass." ;
rdfs:subClassOf obo:GO_0019222 .
obo:RO_0002211 a rdf:Property ;
rdfs:label "regulates" ;
rdfs:range .
obo:OMP_0000375 a rdfs:Class ;
rdfs:label "abolished internalization by macrophage" ;
rdfs:subClassOf obo:OMP_0000374 .
obo:OMP_0007372 a rdfs:Class ;
rdfs:label "alkylating agent resistance phenotype" ;
rdfs:comment "A chemical resistance phenotype relating to resistance or sensitivity of a microbe to an alkylating agent: a highly reactive chemical that introduces alkyl radicals into biologically active molecules and thereby prevents their proper functioning." ;
rdfs:subClassOf obo:OMP_0007195 .
obo:OMP_0005335 a rdfs:Class ;
rdfs:label "absence of protein localization" ;
rdfs:comment "A protein localization phenotype where an organism, cell, or cells lack protein localization." ;
rdfs:subClassOf obo:OMP_0005332 .
obo:OMP_0007873 a rdfs:Class ;
rdfs:label "decreased resistance to A22" ;
rdfs:comment "This term and was deemed to be too granular. In its place, use OMP:000 7879 decreased resistance to an antimicrobial agent and enter database identifier for A22 in the Annotation Extension field." .
obo:GO_0042330 a rdfs:Class ;
rdfs:label "taxis" ;
rdfs:comment "The directed movement of a motile cell or organism in response to an external stimulus." ;
rdfs:subClassOf obo:GO_0009605 , obo:GO_0040011 .
obo:OMP_0006021 a rdfs:Class ;
rdfs:label "altered beta-lactam resistance" ;
rdfs:comment "A beta-lactam resistance phenotype where resistance to a beta-lactam compound is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0000336 , obo:OMP_0007134 .
obo:OMP_0007977 a rdfs:Class ;
rdfs:label "altered cell diameter" ;
rdfs:subClassOf obo:OMP_0000317 , obo:OMP_0007083 .
obo:OMP_0007056 a rdfs:Class ;
rdfs:label "increased utilization of inorganic sulfur" ;
rdfs:comment "An inorganic sulfur source utilization phenotype where the organism has increased ability to use an inorganic S-containing compound as the source of sulfur relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007086 .
obo:OMP_0007326 a rdfs:Class ;
rdfs:label "absence of organic sulfur utilization" ;
rdfs:comment "A sulfur source utilization phenotype where an organism cannot use an organic S-containing chemical as the source of sulfur." ;
rdfs:subClassOf obo:OMP_0007042 .
obo:OMP_0005162 a rdfs:Class ;
rdfs:label "altered phosphatase activity" ;
rdfs:comment "A phosphatase phenotype where phosphatase activity is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0005130 , obo:OMP_0005160 .
obo:PATO_0002300 a rdfs:Class ;
rdfs:label "increased quality" ;
rdfs:comment "A quality that has a value that is increased compared to normal or average." ;
rdfs:subClassOf obo:PATO_0000001 , obo:PATO_0000069 .
obo:OMP_0008050 a rdfs:Class ;
rdfs:label "plaque size phenotype" ;
rdfs:comment "A bacteriophage plaque morphology phenotype that describe the size of viral plaques." .
obo:OMP_0008031 a rdfs:Class ;
rdfs:label "altered exosporium" ;
rdfs:comment "An endospore exosporium phenotype where the exposporium is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007230 .
obo:OMP_0007089 a rdfs:Class ;
rdfs:label "abolished heme utilization" ;
rdfs:comment "A decreased heme utilization phenotype where the ability to utilize heme as a source of iron is abolished." ;
rdfs:subClassOf obo:OMP_0000453 , obo:OMP_0000454 .
obo:OMP_0007436 a rdfs:Class ;
rdfs:label "increased sexual sporulation" ;
rdfs:comment "An altered sexual sporulation phenotype where the frequency, rate, timing, or extent of the process of forming sexual spores is increased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007435 .
obo:OMP_0007223 a rdfs:Class ;
rdfs:label "decreased spore germination efficiency" ;
rdfs:comment "A spore germination phenotype where the percentage of spores that germinate is decreased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007292 .
obo:OMP_0006010 a rdfs:Class ;
rdfs:label "altered pilus phenotype" ;
rdfs:comment "A pilus phenotype where the morphology, number, or location of a pilus is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0000084 .
obo:OMP_0007542 a rdfs:Class ;
rdfs:label "haploid fruiting phenotype" ;
rdfs:comment "An asexual reproduction phenotype where progeny are contained in a fruiting body that forms as the result of mating between strains of the same mating-type or self-mating." ;
rdfs:subClassOf obo:OMP_0007066 .
obo:OMP_0005397 a rdfs:Class ;
rdfs:label "octahedral capsid" ;
rdfs:comment "A capsid morphology phenotype where the capsid is shaped like an octahedron which is a polyhedron with 8 plane faces." ;
rdfs:subClassOf obo:OMP_0005394 .
obo:OMP_0000030 a rdfs:Class ;
rdfs:label "absence of flagellum" ;
rdfs:comment "A flagellum phenotype where the organism does not possess a flagellum or flagella." ;
rdfs:subClassOf obo:OMP_0000027 .
obo:PATO_0002000 a rdfs:Class ;
rdfs:label "lacks all parts of type" ;
rdfs:comment "A quality of physical entities inhering in a bearer by virtue of the bearer's lacking a physical part as specified by the additional entity." ;
rdfs:subClassOf obo:PATO_0001999 .
obo:OMP_0006050 a rdfs:Class ;
rdfs:label "not resistant to bacteriocin" ;
rdfs:comment "A bacteriocin resistance phenotype where an organism or cell is sensitive to one or more bacteriocins." ;
rdfs:subClassOf obo:OMP_0006027 .
obo:OMP_0000212 a rdfs:Class ;
rdfs:label "smooth colony surface" ;
rdfs:comment "A colony surface phenotype where colonies have a shiny glistening surface." ;
rdfs:subClassOf obo:OMP_0000210 .
obo:OMP_0007939 a rdfs:Class ;
rdfs:label "increased ploidy in a vegetative microbial cell" ;
rdfs:comment "A cell phenotype observed in the vegetative growth phase of the life cycle in which the number of sets of chromosomes in a microbial cell, i.e. ploidy, increases relative to the designated control." ;
rdfs:subClassOf obo:OMP_0007746 .
obo:PATO_0000982 a rdfs:Class ;
rdfs:label "permeable" ;
rdfs:comment "A permeability quality inhering in a bearer by virtue of the bearer's being capable to be permeated or pervaded by a gas or liquid (as by osmosis or diffusion)." ;
rdfs:subClassOf obo:PATO_0000970 .
obo:OMP_0008003 a rdfs:Class ;
rdfs:label "presence of an endospore germ cell wall" ;
rdfs:comment "An endospore germ cell wall phenotype where an endospore has a germ cell wall." ;
rdfs:subClassOf obo:OMP_0008001 .
obo:OMP_0007729 a rdfs:Class ;
rdfs:label "altered vegetative cell population viability" ;
rdfs:comment "An altered cell population viability phenotype where the viability of cells in the vegetative growth phase of the life cycle is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007459 .
obo:OMP_0007123 a rdfs:Class ;
rdfs:label "Increased translation" ;
rdfs:comment "An altered translation phenotype where translation of one or more mRNAs is increased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007122 .
obo:OMP_0005241 a rdfs:Class ;
rdfs:label "absence of golgi apparatus" ;
rdfs:comment "A golgi apparatus phenotype where a cell or cells lack a golgi apparatus." ;
rdfs:subClassOf obo:OMP_0005237 .
obo:OMP_0005049 a rdfs:Class ;
rdfs:label "increased frequency of homologous recombination" ;
rdfs:comment "A homologous recombination phenotype where the prevalence of homologous recombination is increased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0006002 .
obo:OMP_0007242 a rdfs:Class ;
rdfs:label "altered host-virus interaction" ;
rdfs:comment "A host-virus interaction phenotype that is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0000026 , obo:OMP_0007085 .
obo:GO_0009454 a rdfs:Class ;
rdfs:label "aerotaxis" ;
rdfs:comment "The directed movement of a motile cell or organism in response to environmental oxygen." ;
rdfs:subClassOf obo:GO_0006935 , obo:GO_0009453 .
obo:OMP_0007359 a rdfs:Class ;
rdfs:label "resistant to a nucleoside" ;
rdfs:comment "A nucleoside resistance phenotype where an organism, cell, or cells is resistant to a nucleoside." ;
rdfs:subClassOf obo:OMP_0007358 .
obo:OMP_0005073 a rdfs:Class ;
rdfs:label "presence of mitotic recombination" ;
rdfs:comment "A mitotic recombination phenotype where a cell or cells have the ability to perform mitotic recombination." ;
rdfs:subClassOf obo:OMP_0005045 .
obo:OMP_0008010 a rdfs:Class ;
rdfs:label "outer endospore membrane phenotype" ;
rdfs:comment "An endospore external encapsulating structure phenotype related to the outer endospore membrane, a phospholipid bilayer, derived from the mother cell, located between the endospore cortex and endospore coat." ;
rdfs:subClassOf obo:OMP_0007229 .
obo:OMP_0000174 a rdfs:Class ;
rdfs:label "growth phenotype" ;
rdfs:comment "A microbial phenotype related to the increase in size or mass over time of an entire organism, a part of an organism, or a cell." ;
rdfs:subClassOf obo:OMP_0000000 , obo:OMP_0007194 .
obo:OMP_0007257 a rdfs:Class ;
rdfs:label "decreased colonization of a host" ;
rdfs:comment "An altered colonization of a host phenotype where the frequency, rate, timing, or extent of colonization is decreased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007255 .
obo:OMP_0000119 a rdfs:Class ;
rdfs:label "tetrad" ;
rdfs:comment "A cell arrangement phenotype where squares of four coccus cells arise from division in two planes." ;
rdfs:subClassOf obo:OMP_0000003 .
obo:OMP_0005224 a rdfs:Class ;
rdfs:label "abolished cell fusion" ;
rdfs:comment "A decreased cell fusion phenotype where the frequency, rate, timing or extent of cell fusion is abolished." ;
rdfs:subClassOf obo:OMP_0005223 .
obo:OMP_0006043 a rdfs:Class ;
rdfs:label "resistant to quinolone" ;
rdfs:comment "A quinoline compound resistance phenotype where an organism or cell is resistant to one or more quinolone compounds." ;
rdfs:subClassOf obo:OMP_0006029 .
obo:GO_0050789 a rdfs:Class ;
rdfs:label "regulation of biological process" ;
rdfs:comment "Any process that modulates the frequency, rate or extent of a biological process. Biological processes are regulated by many means; examples include the control of gene expression, protein modification or interaction with a protein or substrate molecule." ;
rdfs:subClassOf obo:GO_0065007 .
obo:OMP_0007822 a rdfs:Class ;
rdfs:label "resistant to nitrofuran" ;
rdfs:comment "A nitrofuran resistance phenotype where a microbe is resistant to one or more nitrofuran compounds." ;
rdfs:subClassOf obo:OMP_0007821 .
obo:OMP_0007445 a rdfs:Class ;
rdfs:label "absence of lethality in immunocompromised mice" ;
rdfs:comment "An absence of lethality phenotype where the host of the infection is an immunocompromised mouse (or mice) (Mus musculus)." ;
rdfs:subClassOf obo:OMP_0007396 .
obo:OMP_0006091 a rdfs:Class ;
rdfs:label "increased urease activity" ;
rdfs:comment "An altered urease activity phenotype where urease activity is increased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0006088 .
obo:OMP_0005179 a rdfs:Class ;
rdfs:label "increased acid phosphatase activity" ;
rdfs:comment "An altered acid phosphatase activity phenotype where acid phosphatase activity is increased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0005176 .
obo:OMP_0005296 a rdfs:Class ;
rdfs:label "presence of colonization of mouse tissue" ;
rdfs:comment "A colonization of mouse tissue phenotype where a microbe is able to colonize mouse tissue." ;
rdfs:subClassOf obo:OMP_0005282 , obo:OMP_0005295 .
obo:OMP_0005304 a rdfs:Class ;
rdfs:label "absence of colonization of tissue in an immunocompromised mouse" ;
rdfs:comment "A colonization of immunocompromised mouse tissue phenotype where a microbe is unable to colonize the tissue of an immunocompromised mouse." ;
rdfs:subClassOf obo:OMP_0005302 .
obo:OMP_0007876 a rdfs:Class ;
rdfs:label "resistant to an antimicrobial agent" ;
rdfs:comment "An antimicrobial agent resistance phenotype where growth and reproduction of a microbe occurs in the presence of the antimicrobial agent specified in the Annotation Extension field." ;
rdfs:subClassOf obo:OMP_0000274 .
obo:OMP_0007154 a rdfs:Class ;
rdfs:label "increased frequency of persister cells" ;
rdfs:comment "An altered persister cell phenotype where the fraction of cells in a microbial population that are persister cells is increased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007153 .
obo:OMP_0007096 a rdfs:Class ;
rdfs:label "increased motility by swarming" ;
rdfs:comment "An increased motility phenotype where the frequency, rate, timing, or extent of motility by swarming is increased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0000045 , obo:OMP_0005323 .
obo:OMP_0007019 a rdfs:Class ;
rdfs:label "increased amino acid requirement" ;
rdfs:comment "An amino acid requirement phenotype where an organism's requirement for an amino acid in the growth medium is increased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007074 , obo:OMP_0007354 .
obo:OMP_0000291 a rdfs:Class ;
rdfs:label "genophore phenotype" ;
rdfs:comment "A genophore is the chromosome equivalent in any organism, cellular organelle, or virus, however, the term is commonly used to refer to chromosomes other than the nuclear chromosomes of eukaryotes." .
obo:OMP_0000390 a rdfs:Class ;
rdfs:label "presence of transcription of gene or operon" ;
rdfs:subClassOf obo:OMP_0007106 .
obo:OMP_0007008 a rdfs:Class ;
rdfs:label "decreased population growth at acidic pH" ;
rdfs:comment "An altered population growth phenotype where the rate and/or extent of growth of a microbial population at an acidic pH ( ;
rdfs:subPropertyOf obo:RO_0002211 .
obo:OMP_0007515 a rdfs:Class ;
rdfs:label "decreased positive osmotaxis" ;
rdfs:comment "A decreased osmotaxis phenotype where positive osmotaxis by a motile microbe is decreased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0005372 .
obo:OMP_0007337 a rdfs:Class ;
rdfs:label "decreased autophagic vesicle formation" ;
rdfs:comment "An altered autophagic vesicle formation phenotype where autophagic vesicle formation is decreased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007335 .
obo:OMP_0005230 a rdfs:Class ;
rdfs:label "increased cell fusion during mating" ;
rdfs:comment "An altered cell fusion during mating phenotype where the frequency, rate, timing, or extent of cell fusion is increased during mating." ;
rdfs:subClassOf obo:OMP_0005229 .
obo:OMP_0007145 a rdfs:Class ;
rdfs:label "altered asexual sporulation" ;
rdfs:comment "An asexual sporulation phenotype where the rate, frequency, timing, or extent of the process of forming mitotic spores is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007142 , obo:OMP_0007144 .
obo:OMP_0006122 a rdfs:Class ;
rdfs:label "abolished uninduced expression of the SOS response" ;
rdfs:comment "A decreased basal expression of the SOS response phenotype where basal expression of one or more genes in the SOS response is abolished." ;
rdfs:subClassOf obo:OMP_0005021 .
obo:OMP_0000302 a rdfs:Class ;
rdfs:label "increased fraction of cells with two nucleoids" ;
rdfs:subClassOf obo:OMP_0000300 .
obo:OMP_0005235 a rdfs:Class ;
rdfs:label "presence of cell wall" ;
rdfs:comment "A cell wall morphology phenotype where a cell or cells exhibit a cell wall." ;
rdfs:subClassOf obo:OMP_0005233 .
obo:OMP_0005381 a rdfs:Class ;
rdfs:label "abolished sexual sporulation frequency" ;
rdfs:comment "A decreased sexual sporulation frequency phenotype where the fraction of cells in a population that undergo meiosis and forms spores under sporulation-inducing conditions is below the limits of detection." ;
rdfs:subClassOf obo:OMP_0005380 .
obo:OMP_0007456 a rdfs:Class ;
rdfs:label "population viability phenotype" ;
rdfs:comment "A population phenotype relating to the proportion of a population that is viable under the specified conditions. Viability refers to the ability of a microbe to survive or grow and reproduce." ;
rdfs:subClassOf obo:OMP_0007006 .
obo:OMP_0006080 a rdfs:Class ;
rdfs:label "decarboxylase positive" ;
rdfs:comment "A decarboxylase test phenotype where an organism exhibits decarboxylase activity." ;
rdfs:subClassOf obo:OMP_0000219 .
obo:OMP_0006019 a rdfs:Class ;
rdfs:label "altered azole resistance" ;
rdfs:comment "An azole resistance phenotype where resistance to an azole compound is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0006028 , obo:OMP_0007134 .
obo:OMP_0007796 a rdfs:Class ;
rdfs:label "presence of vegetative cell population growth" ;
rdfs:subClassOf obo:OMP_0007795 .
obo:OMP_0000328 a rdfs:Class ;
rdfs:label "cell volume phenotype" ;
rdfs:subClassOf obo:OMP_0000074 .
obo:OMP_0005201 a rdfs:Class ;
rdfs:label "altered alpha-1,3-mannosyltransferase activity" ;
rdfs:comment "An alpha-1,3- mannosyltransferase activity phenotype where alpha-1,3-mannosyltransferase activity is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0005198 .
obo:OMP_0000196 a rdfs:Class ;
rdfs:label "increased catalase activity" ;
rdfs:comment "An altered catalase activity phenotype where catalase activity is increased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0006077 .
obo:OMP_0007785 a rdfs:Class ;
rdfs:label "presence of cellular process during vegetative growth" ;
rdfs:subClassOf obo:OMP_0007783 .
obo:OMP_0006171 a rdfs:Class ;
rdfs:label "abolished binary fission" ;
rdfs:comment "A decreased binary fission phenotype where the rate, frequency, timing, or extent of binary fission is abolished." ;
rdfs:subClassOf obo:OMP_0006170 , obo:OMP_0007233 .
obo:OMP_0007168 a rdfs:Class ;
rdfs:label "abolished septation" ;
rdfs:comment "A decreased septation phenotype where formation of new cell septa is abolished." ;
rdfs:subClassOf obo:OMP_0005138 .
obo:PATO_0001558 a rdfs:Class ;
rdfs:label "lacking processual parts" ;
rdfs:comment "A quality of a process inhering in a bearer by virtue of the bearer's lacking a processual part as specified by the additional entity." ;
rdfs:subClassOf obo:PATO_0001564 .
obo:OMP_0007917 a rdfs:Class ;
rdfs:label "cell size variability" ;
rdfs:comment "A cell population phenotype that describes the extent of cell size variability within a growing microbial cell population." ;
rdfs:subClassOf obo:OMP_0000272 .
obo:OMP_0006095 a rdfs:Class ;
rdfs:label "abolished enzymatic activity" ;
rdfs:comment "A decreased enzymatic activity phenotype where a specified enzymatic activity is abolished." ;
rdfs:subClassOf obo:OMP_0005103 , obo:OMP_0007281 .
obo:OMP_0000271 a rdfs:Class ;
rdfs:label "increased cell population growth rate" ;
rdfs:subClassOf obo:OMP_0000266 .
obo:OMP_0007134 a rdfs:Class ;
rdfs:label "altered resistance to an antimicrobial agent" ;
rdfs:comment "An antimicrobial agent resistance phenotype where resistance or sensitivity to an antimicrobial agent is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0000274 , obo:OMP_0007248 .
obo:OMP_0006162 a rdfs:Class ;
rdfs:label "altered nanotube phenotype" ;
rdfs:comment "A nanotube phenotype where the frequency, rate, timing, or extent of formation of the tube structure is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0000175 .
obo:OMP_0007183 a rdfs:Class ;
rdfs:label "altered anaerobic respiration" ;
rdfs:comment "An anaerobic respiration phenotype where the ability to perform anaerobic respiration is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007072 .
obo:OMP_0007504 a rdfs:Class ;
rdfs:label "Increased capsule size" ;
rdfs:comment "An altered capsule size phenotype where the size of the capsule is increased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007503 .
obo:OMP_0000454 a rdfs:Class ;
rdfs:label "absence of heme utilization" ;
rdfs:comment "A heme utilization phenotype where a cell or cells don't exhibit the ability to utilize heme as a source of iron." ;
rdfs:subClassOf obo:OMP_0000451 .
obo:OMP_0008064 a rdfs:Class ;
rdfs:label "bull's eye plaque appearance" ;
rdfs:comment "A bacteriophage plaque morphology phenotype where the appearance of viral plaque has a high central density of surviving colonies and then a depletion region, followed by a high-colony-density region and then finally an apparently clear zone." ;
rdfs:subClassOf obo:OMP_0008058 .
obo:OMP_0007906 a rdfs:Class ;
rdfs:label "altered organic nitrogen source utilization" ;
rdfs:subClassOf obo:OMP_0007014 , obo:OMP_0007905 .
obo:OMP_0007064 a rdfs:Class ;
rdfs:label "phototrophic phenotype" ;
rdfs:comment "An energy metabolism phenotype where light is used as the energy source." ;
rdfs:subClassOf obo:OMP_0000224 .
obo:OMP_0007348 a rdfs:Class ;
rdfs:label "increased protein secretion" ;
rdfs:comment "An altered protein secretion phenotype where the frequency, rate, timing or extent of the process of protein secretion is increased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007347 .
obo:OMP_0007287 a rdfs:Class ;
rdfs:label "absence of laccase activity" ;
rdfs:comment "A laccase phenotype where an organism doesn't exhibit laccase activity." ;
rdfs:subClassOf obo:OMP_0007285 .
obo:OMP_0007311 a rdfs:Class ;
rdfs:label "presence of apoptosis" ;
rdfs:comment "An apoptosis phenotype where a cell or cells can undergo apoptosis." ;
rdfs:subClassOf obo:OMP_0007309 .
obo:OMP_0007484 a rdfs:Class ;
rdfs:label "altered resistance to quaternary ammonium salt antimicrobial agent" ;
rdfs:comment "A quaternary ammonium salts resistance phenotype where the frequency, rate, timing, or extent of resistance to quaternary ammonium salts is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007134 , obo:OMP_0007481 .
obo:OMP_0000260 a rdfs:Class ;
rdfs:label "altered nucleoid area" ;
rdfs:subClassOf obo:OMP_0000344 .
obo:GO_0044260 a rdfs:Class ;
rdfs:label "cellular macromolecule metabolic process" ;
rdfs:comment "The chemical reactions and pathways involving macromolecules, any molecule of high relative molecular mass, the structure of which essentially comprises the multiple repetition of units derived, actually or conceptually, from molecules of low relative molecular mass, as carried out by individual cells." ;
rdfs:subClassOf obo:GO_0043170 , obo:GO_0044237 .
obo:OMP_0005151 a rdfs:Class ;
rdfs:label "decreased ferric reductase activity" ;
rdfs:comment "An altered ferric reductase activity phenotype where ferric reductase activity is decreased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0005150 .
obo:OMP_0005309 a rdfs:Class ;
rdfs:label "colonization of rabbit tissue phenotype" ;
rdfs:comment "A colonization of host tissue phenotype related to the ability of a microbe to colonize rabbit tissue." ;
rdfs:subClassOf obo:OMP_0005281 .
obo:OMP_0005188 a rdfs:Class ;
rdfs:label "increased cytoskeleton morphology" ;
rdfs:comment """An altered cytoskeleton morphology phenotype where
cytoskeleton morphology is increased relative to a designated control.""" .
obo:OMP_0007833 a rdfs:Class ;
rdfs:label "decreased resistance to sulfonamde" ;
rdfs:comment "An altered sulfonamide antimicrobial agent resistance phenotype where resistance of a microbe to a sulfonamide antimicrobial agent is decreased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007831 .
obo:OMP_0007365 a rdfs:Class ;
rdfs:label "acridine antimicrobial agent resistance phenotype" ;
rdfs:comment "An antimicrobial agent resistance phenotype relating to resistance or sensitivity of a microbe to an antimicrobial agent that includes an acridine moiety: a polycyclic heteroarene that is anthracene in which one of the central CH groups is replaced by a nitrogen atom." ;
rdfs:subClassOf obo:OMP_0000274 .
obo:OMP_0005093 a rdfs:Class ;
rdfs:label "increased resistance to gamma-ray radiation" ;
rdfs:comment "An altered resistance to gamma-ray radiation phenotype where the resistance of microbes in a population to gamma-rays is increased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0005123 .
obo:OMP_0000108 a rdfs:Class ;
rdfs:label "colony optical phenotype" ;
rdfs:comment "A colony morphology phenotype dealing with the interaction of a colony or colonies and light." ;
rdfs:subClassOf obo:OMP_0000100 .
obo:OMP_0005207 a rdfs:Class ;
rdfs:label "absence of adhesion to host" ;
rdfs:comment "An adhesion to host phenotype where a microbe lacks the ability to attach to a host." ;
rdfs:subClassOf obo:OMP_0005206 .
obo:OMP_0005326 a rdfs:Class ;
rdfs:label "presence of agar invasion" ;
rdfs:comment "An agar invasion phenotype where a microbe has the ability to penetrate agar media during growth." ;
rdfs:subClassOf obo:OMP_0005325 .
obo:OMP_0005168 a rdfs:Class ;
rdfs:label "altered superoxide dismutase activity" ;
rdfs:comment "A superoxide dismutase phenotype where superoxide dismutase activity is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0005130 , obo:OMP_0005166 .
obo:OMP_0000167 a rdfs:Class ;
rdfs:label "irregular colony" ;
rdfs:comment "A colony form phenotype characterized by growth without a defined shape or size." ;
rdfs:subClassOf obo:OMP_0000103 .
obo:OMP_0007809 a rdfs:Class ;
rdfs:label "altered cell population growth" ;
rdfs:comment "A cell population growth phenotype where the rate or extent of growth of a population of microbial cells is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0000281 , obo:OMP_0007157 , obo:OMP_0007794 .
obo:OMP_0007865 a rdfs:Class ;
rdfs:label "altered resistance to bicyclomycin" .
obo:OMP_0005140 a rdfs:Class ;
rdfs:label "absence of resistance to killing by host" ;
rdfs:comment "A resistance to killing by host phenotype where a microbe is sensitive to killing by a host." ;
rdfs:subClassOf obo:OMP_0005111 .
obo:OMP_0008021 a rdfs:Class ;
rdfs:label "endospore formation stopped at stage IV" ;
rdfs:comment "An interrupted endospore formation phenotype where sporulation is stopped after deposition of the cortex and germ cell wall, but before formation of the endospore coat." ;
rdfs:subClassOf obo:OMP_0008018 .
obo:OMP_0000357 a rdfs:Class ;
rdfs:label "increased relative timing of cell constriction" ;
rdfs:subClassOf obo:OMP_0000354 .
obo:PATO_0001630 a rdfs:Class ;
rdfs:label "dispersed" ;
rdfs:comment "A positional quality inhering in a bearer by virtue of the bearer's being distributed or spread over a considerable extent." ;
rdfs:subClassOf obo:PATO_0000140 .
obo:OMP_0007414 a rdfs:Class ;
rdfs:label "absence of conjugation" ;
rdfs:comment "A conjugation phenotype where mating does not occur through the process of conjugation." ;
rdfs:subClassOf obo:OMP_0007413 .
obo:PATO_0000414 a rdfs:Class ;
rdfs:label "unbranched" ;
rdfs:comment "A branchiness quality inhering in a bearer by virtue of the bearer's lacking branches." ;
rdfs:subClassOf obo:PATO_0002009 .
obo:OMP_0006137 a rdfs:Class ;
rdfs:label "abolished resistance to aminoglycoside" ;
rdfs:comment "A decreased resistance to aminoglycoside phenotype where resistance to an aminoglycoside is abolished." ;
rdfs:subClassOf obo:OMP_0006057 , obo:OMP_0006059 .
obo:OMP_0005157 a rdfs:Class ;
rdfs:label "decreased protein kinase A activity" ;
rdfs:comment "An altered protein kinase A activity phenotype where protein kinase A activity is decreased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0005156 .
obo:OMP_0007884 a rdfs:Class ;
rdfs:label "resistant to a metal" ;
rdfs:comment "A metal resistance phenotype where growth of a microbial population occurs in the presence of a metal." ;
rdfs:subClassOf obo:OMP_0007247 , obo:OMP_0007890 .
obo:OMP_0007329 a rdfs:Class ;
rdfs:label "bud neck morphology" ;
rdfs:comment "A bud morphology phenotype relating to the size, shape, or appearance of the bud neck, which is the region where the bud joins the mother cell." ;
rdfs:subClassOf obo:OMP_0007327 .
obo:OMP_0000238 a rdfs:Class ;
rdfs:label "crateriform colony elevation" ;
rdfs:comment "A colony elevation phenotype characterized by crater like growth." ;
rdfs:subClassOf obo:OMP_0000104 .
obo:OMP_0000259 a rdfs:Class ;
rdfs:label "increased cell division ratio variability" ;
rdfs:subClassOf obo:OMP_0000251 .
obo:OMP_0000024 a rdfs:Class ;
rdfs:label "altered flagellum length" ;
rdfs:comment "An altered flagellum phenotype where the length of the flagellum is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007105 .
obo:PATO_0000052 a rdfs:Class ;
rdfs:label "shape" ;
rdfs:comment "A morphological quality inhering in a bearer by virtue of the bearer's ratios of distances between its features (points, edges, surfaces and also holes etc)." ;
rdfs:subClassOf obo:PATO_0000051 .
obo:OMP_0007896 a rdfs:Class ;
rdfs:label "decreased resistance to a surfactant" ;
rdfs:comment "An altered surfactant resistance phenotype where growth and reproduction of a microbe in the presence of a surfactant is decreased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007894 .
obo:OMP_0000205 a rdfs:Class ;
rdfs:label "forms single species biofilm" ;
rdfs:comment "A biofilm phenotype where the biofilm is formed by a single species." ;
rdfs:subClassOf obo:OMP_0000176 .
obo:OMP_0000189 a rdfs:Class ;
rdfs:label "gram negative" ;
rdfs:comment "A gram stain phenotype where a cell or cells do not retain crystal violet stain when decolorized with an organic solvent such as ethanol." ;
rdfs:subClassOf obo:OMP_0000191 .
obo:OMP_0007489 a rdfs:Class ;
rdfs:label "absence of motility by swarming" ;
rdfs:comment "An absence of motility phenotype where a microbe is not capable of swarming motility." ;
rdfs:subClassOf obo:OMP_0000133 .
obo:OMP_0007085 a rdfs:Class ;
rdfs:label "altered microbial phenotype" ;
rdfs:comment "A microbial phenotype that is altered in some way relative to a designated control." ;
rdfs:subClassOf obo:OMP_0000000 .
obo:OMP_0005004 a rdfs:Class ;
rdfs:label "thermophile" ;
rdfs:comment "A population growth phenotype where growth of a microbial population can occur at 55 C or higher and optimal growth occurs between 55 C and 65 C." ;
rdfs:subClassOf obo:OMP_0005002 .
obo:OMP_0007045 a rdfs:Class ;
rdfs:label "inorganic phosphorus source utilization" ;
rdfs:comment "A phosphorus source utilization phenotype where an inorganic P-containing compound is used as the source of phosphorus." ;
rdfs:subClassOf obo:OMP_0007043 .
obo:OMP_0007571 a rdfs:Class ;
rdfs:label "absence of resistance to oxidative stress" ;
rdfs:comment "A resistance to oxidative stress phenotype where microbes in a population stop growing (and may die) when exposed to oxidative stress." ;
rdfs:subClassOf obo:OMP_0007569 .
obo:OMP_0007198 a rdfs:Class ;
rdfs:label "presence of resistance to UV-A radiation" ;
rdfs:comment "A presence of resistance to UV radiation where microbes in a population continue to grow and divide when exposed to UV-A radiation (typically, wavelengths of 315-400 nm)." ;
rdfs:subClassOf obo:OMP_0007282 .
obo:OMP_0000227 a rdfs:Class ;
rdfs:label "altered cell aspect ratio variability" ;
rdfs:subClassOf obo:OMP_0000193 .
obo:OMP_0000155 a rdfs:Class ;
rdfs:label "lobate margin" ;
rdfs:comment "A colony margin phenotype characterized by lobed growth along the colony edge." ;
rdfs:subClassOf obo:OMP_0000149 .
obo:OMP_0007042 a rdfs:Class ;
rdfs:label "sulfur source utilization phenotype" ;
rdfs:comment "A nutrient utilization phenotype where the nutrient is used as a source of sulfur." ;
rdfs:subClassOf obo:OMP_0006022 .
obo:OMP_0005133 a rdfs:Class ;
rdfs:label "abolished resistance to x-ray radiation" ;
rdfs:comment "A decreased x-ray radiation resistance phenotype where resistance to x-ray radiation is abolished." ;
rdfs:subClassOf obo:OMP_0005096 .
obo:OMP_0000191 a rdfs:Class ;
rdfs:label "gram stain phenotype" ;
rdfs:comment "A cell staining phenotype where microorganisms are grouped based on their ability to retain crystal violet stain when decolorized with an organic solvent such as ethanol." ;
rdfs:subClassOf obo:OMP_0000214 .
obo:OMP_0007212 a rdfs:Class ;
rdfs:label "altered phosphorus source utilization" ;
rdfs:comment "A phosphorus source utilization phenotype where the ability to utilize one or more sources of phosphorus is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007043 , obo:OMP_0007104 .
obo:PATO_0000056 a rdfs:Class ;
rdfs:label "trophic quality" ;
rdfs:comment "An organismal quality inhering in a bearer by virtue of the bearer's disposition to synthesize a particular organic compound required for its growth." ;
rdfs:subClassOf obo:PATO_0001995 .
obo:OMP_0007214 a rdfs:Class ;
rdfs:label "altered organic phosphorus source utilization" ;
rdfs:comment "An altered phosphorus source utilization phenotype where the ability to utilize one or more organic sources of phosphorus is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007046 , obo:OMP_0007212 .
obo:OMP_0007302 a rdfs:Class ;
rdfs:label "increased diazonium blue B staining" ;
rdfs:comment "An altered diazonium blue B (DBB) staining phenotype where DBB staining of cells is increased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007297 .
obo:OMP_0000185 a rdfs:Class ;
rdfs:label "obligate aerobe" ;
rdfs:comment "A microbial phenotype that describes a microorganism that requires the presence of oxygen gas (O2) for growth." ;
rdfs:subClassOf obo:OMP_0007928 .
obo:OMP_0005301 a rdfs:Class ;
rdfs:label "abolished colonization of mouse tissue" ;
rdfs:comment "A decreased colonization of mouse tissue phenotype where colonization is abolished." ;
rdfs:subClassOf obo:OMP_0005297 , obo:OMP_0005300 .
obo:OMP_0000500 a rdfs:Class ;
rdfs:label "decreased aerotaxis" ;
rdfs:comment "An altered aerotaxis phenotype where the frequency, rate, timing, or extent of aerotaxis is decreased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007076 .
obo:OMP_0007966 a rdfs:Class ;
rdfs:label "increased population growth during nutrient limitation" ;
rdfs:comment "An altered cell population growth phenotype where the rate or extent of growth of a microbial population under conditions of limitation for an essential nutrient (i.e. conditions where an essential nutrient is present at low concentration) is increased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007965 .
obo:OMP_0005358 a rdfs:Class ;
rdfs:label "increased mating efficiency" ;
rdfs:comment "A mating efficiency phenotype where the efficiency of mating is increased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0005357 .
obo:OMP_0005353 a rdfs:Class ;
rdfs:label "increased mating" ;
rdfs:comment "An altered mating phenotype where the frequency, rate, timing, or extent of sexual reproduction by conjugation is increased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0005352 .
obo:OMP_0000436 a rdfs:Class ;
rdfs:label "not resistant to aminopyrimidine" ;
rdfs:comment "An aminopyrimidine resistance phenotype where an organism or cell is sensitive to one or more aminopyrimidine compounds." ;
rdfs:subClassOf obo:OMP_0000331 .
obo:OMP_0000318 a rdfs:Class ;
rdfs:label "presence of cell length variability" ;
rdfs:subClassOf obo:OMP_0007921 .
obo:OMP_0005393 a rdfs:Class ;
rdfs:label "pseudo tail morphology phenotype" ;
rdfs:comment "A virion morphology phenotype where the isolated virions do not show presence of a tail, but rather, the tail is only seen during infection or through some other manipulation of the virion." ;
rdfs:subClassOf obo:OMP_0007541 .
obo:OMP_0000216 a rdfs:Class ;
rdfs:label "aerobic respiration phenotype" ;
rdfs:comment "A respiration phenotype where oxygen (O2) is used as the terminal electron acceptor." ;
rdfs:subClassOf obo:OMP_0007112 .
obo:GO_0006139 a rdfs:Class ;
rdfs:label "nucleobase-containing compound metabolic process" ;
rdfs:comment "Any cellular metabolic process involving nucleobases, nucleosides, nucleotides and nucleic acids." ;
rdfs:subClassOf obo:GO_0006725 , obo:GO_0034641 , obo:GO_0044238 , obo:GO_0046483 , obo:GO_1901360 .
obo:OMP_0007682 a rdfs:Class ;
rdfs:label "terminal phenotype" ;
rdfs:comment "A microbial phenotype that is the phenotype exhibited by a microbe as it becomes nonviable." ;
rdfs:subClassOf obo:OMP_0000000 .
obo:OMP_0007612 a rdfs:Class ;
rdfs:label "absence of double-strand DNA breaks" ;
rdfs:comment "An absence of DNA breaks phenotype where double-strand DNA breaks don't occur." ;
rdfs:subClassOf obo:OMP_0007604 .
obo:PATO_0001241 a rdfs:Class ;
rdfs:label "physical object quality" ;
rdfs:comment "A quality which inheres in a continuant." ;
rdfs:subClassOf obo:PATO_0000001 .
obo:OMP_0007225 a rdfs:Class ;
rdfs:label "central location of endospore" ;
rdfs:comment "An endospore location phenotype where mature spores are located in the center of the mother cell (sporangium)." ;
rdfs:subClassOf obo:OMP_0007224 .
obo:GO_0048870 a rdfs:Class ;
rdfs:label "cell motility" ;
rdfs:comment "Any process involved in the controlled self-propelled movement of a cell that results in translocation of the cell from one place to another." ;
rdfs:subClassOf obo:GO_0006928 , obo:GO_0040011 .
obo:OMP_0000122 a rdfs:Class ;
rdfs:label "streptobacillus" ;
rdfs:comment "A cell arrangement phenotype where bacillis cells are arranged in chains." ;
rdfs:subClassOf obo:OMP_0000003 .
obo:OMP_0000048 a rdfs:Class ;
rdfs:label "chemotaxis phenotype" ;
rdfs:comment "A taxis phenotype where the directed movement of a motile microbe is in response to a specific chemical concentration gradient." ;
rdfs:subClassOf obo:OMP_0000004 .
obo:OMP_0005212 a rdfs:Class ;
rdfs:label "increased adhesion to host" ;
rdfs:comment "An altered adhesion to host phenotype where the frequency, rate, or extent of attachment of a microbe to a host is increased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0005209 .
obo:OMP_0007779 a rdfs:Class ;
rdfs:label "absence of population growth on defined medium" ;
rdfs:comment "A population growth on defined medium phenotype where a microbial population cannot grow on a specified defined medium." ;
rdfs:subClassOf obo:OMP_0007774 .
obo:OMP_0007106 a rdfs:Class ;
rdfs:label "transcription phenotype" ;
rdfs:comment "A gene expression phenotype that affects DNA-dependent transcription." ;
rdfs:subClassOf obo:OMP_0000000 , obo:OMP_0000253 .
obo:OMP_0006077 a rdfs:Class ;
rdfs:label "altered catalase test result" ;
rdfs:comment "A catalase test phenotype where catalase activity is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0000218 , obo:OMP_0007131 .
obo:OMP_0005021 a rdfs:Class ;
rdfs:label "decreased basal expression of the SOS response" ;
rdfs:comment "An altered basal expression of the SOS response phenotype where basal expression of one or more genes in the SOS response is decreased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0005054 .
obo:OMP_0007710 a rdfs:Class ;
rdfs:label "conjugation without glucose starvation" ;
rdfs:comment "An altered conjugation phenotype in which conjugation takes place in cells that are not subject to glucose starvation." ;
rdfs:subClassOf obo:OMP_0007416 .
obo:OMP_0007742 a rdfs:Class ;
rdfs:label "presence of vegetative cell lysis" ;
rdfs:comment "A cell lysis phenotype where cytolysis of a cell in the vegetative growth phase of the life cycle occurs." ;
rdfs:subClassOf obo:OMP_0007741 .
obo:OMP_0007150 a rdfs:Class ;
rdfs:label "abolished motility by gliding" ;
rdfs:comment "A decreased motility by gliding phenotype where the ability of a microbe to move by gliding motility is abolished." ;
rdfs:subClassOf obo:OMP_0007000 , obo:OMP_0007091 , obo:OMP_0007488 .
obo:OMP_0007623 a rdfs:Class ;
rdfs:label "abolished Holliday junction structures" ;
rdfs:comment "A decreased frequency of Holliday junction structure phenotype where the occurrence of Holliday junction structures in chromosomal DNA is abolished." ;
rdfs:subClassOf obo:OMP_0007622 .
obo:OMP_0007774 a rdfs:Class ;
rdfs:label "population growth on defined medium phenotype" ;
rdfs:comment "A population growth phenotype relating to the growth of a microbial population in the vegetative phase of the life cycle to reproduce on a defined medium." ;
rdfs:subClassOf obo:OMP_0007167 .
obo:OMP_0000059 a rdfs:Class ;
rdfs:label "absence of negative aerotaxis" ;
rdfs:comment "An absence of aerotaxis phenotype where a motile microbe doesn't display directed movement away from a higher concentration of environmental oxygen (O2)." ;
rdfs:subClassOf obo:OMP_0000159 .
obo:OMP_0006047 a rdfs:Class ;
rdfs:label "resistant to beta-lactam" ;
rdfs:comment "An beta-lactam compound resistance phenotype where an organism or cell is resistant to one or more beta-lactam compounds." ;
rdfs:subClassOf obo:OMP_0000336 , obo:OMP_0007876 .
obo:OMP_0000339 a rdfs:Class ;
rdfs:label "presence of cell aspect ratio variability" ;
rdfs:subClassOf obo:OMP_0007921 .
obo:OMP_0000178 a rdfs:Class ;
rdfs:label "flocculation phenotype" ;
rdfs:comment "A liquid culture morphology phenotype where cells aggregate together in suspension to form clumps of many cells known as flocs." ;
rdfs:subClassOf obo:OMP_0000177 .
obo:OMP_0008014 a rdfs:Class ;
rdfs:label "inner endospore membrane phenotype" ;
rdfs:comment "An endospore internal structure phenotype related to the inner membrane, which surrounds the core." ;
rdfs:subClassOf obo:OMP_0008013 .
obo:OMP_0000458 a rdfs:Class ;
rdfs:label "not resistant to caffeine" ;
rdfs:comment "A caffeine resistance phenotype where an organism or cell is sensitive to caffeine." ;
rdfs:subClassOf obo:OMP_0000456 .
obo:OMP_0005228 a rdfs:Class ;
rdfs:label "absence of cell fusion during mating" ;
rdfs:comment "A cell fusion during mating phenotype where cell fusion does not occur during mating." ;
rdfs:subClassOf obo:OMP_0005226 .
obo:PATO_0000297 a rdfs:Class ;
rdfs:label "arrested" ;
rdfs:comment "A quality of a process which ends earlier than the natural end time or reference process." ;
rdfs:subClassOf obo:PATO_0002052 , obo:PATO_0002324 .
obo:OMP_0007761 a rdfs:Class ;
rdfs:label "altered microtubule cytoskeleton" ;
rdfs:comment "A microtubule cytoskeleton phenotype where the amount, distribution, or morphology of all or part of the microtubule cytoskeleton is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007759 .
obo:OMP_0007932 a rdfs:Class ;
rdfs:label "resistance to nutrient limitation stress phenotype" ;
rdfs:comment "A resistance to stress phenotype related to the resistance or sensitivity of a microbial population to limitation for an essential nutrient." ;
rdfs:subClassOf obo:OMP_0007568 .
obo:OMP_0007031 a rdfs:Class ;
rdfs:label "presence of dinitrogen utilization" ;
rdfs:comment "A dinitrogen utilization phenotype where an organism can use N2 as the source of nitrogen." ;
rdfs:subClassOf obo:OMP_0006030 .
obo:OMP_0005292 a rdfs:Class ;
rdfs:label "increased colonization of tissue in an immunocompromised host" ;
rdfs:comment "An altered colonization of tissue in an immunocompromised host phenotype where the frequency rate, timing, or extent of colonization of tissue in an immunocompromised host is increased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0005291 .
obo:OMP_0007903 a rdfs:Class ;
rdfs:label "decreased resistance to bile acids" ;
rdfs:comment "An altered resistance to bile acids phenotype where growth and reproduction of a microbe in the presence of bile acids is decreased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007901 .
obo:OMP_0000386 a rdfs:Class ;
rdfs:label "altered cell-cell self recognition" ;
rdfs:subClassOf obo:OMP_0000383 .
obo:OMP_0005269 a rdfs:Class ;
rdfs:label "endomembrane system phenotype" ;
rdfs:comment "A cellular component phenotype relating to the endomembrane, a collection of membranous structures involved in transport within the cell. The endomembrane system includes the nuclear envelope, endoplasmic reticulum, Golgi apparatus, vacuoles, vesicles, and the plasma membrane. Members of the endomembrane system pass materials through each other or through the use of vesicles." ;
rdfs:subClassOf obo:OMP_0007197 .
obo:OMP_0007383 a rdfs:Class ;
rdfs:label "altered resistance to benzamides" ;
rdfs:comment "A benzamides resistance phenotype where the resistance of an organism, cell, or cells to a benzamide is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007380 .
obo:OMP_0005138 a rdfs:Class ;
rdfs:label "decreased septation" ;
rdfs:comment "An altered septation phenotype where formation of new cell septa is decreased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007165 .
obo:OMP_0007071 a rdfs:Class ;
rdfs:label "increased organic carbon source utilization" ;
rdfs:comment "An altered carbon source utilization phenotype where the ability to use an organic carbon source is increased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007078 .
obo:OMP_0007100 a rdfs:Class ;
rdfs:label "spheroid cell shape" ;
rdfs:comment "A cell shape phenotype where a cell has a sphere-like shape, i.e. quadric surface in three dimensions obtained by rotating an ellipse about one of its principle axes." ;
rdfs:subClassOf obo:OMP_0000073 .
obo:OMP_0007662 a rdfs:Class ;
rdfs:label "decreased level of cellular reactive oxygen species" ;
rdfs:subClassOf obo:OMP_0007660 .
obo:OMP_0007010 a rdfs:Class ;
rdfs:label "decreased population growth at alkaline pH" ;
rdfs:comment "An altered population growth phenotype where rate and/or extent of growth of a microbial population at alkaline pH (> pH 7) is decreased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007138 .
obo:OMP_0007361 a rdfs:Class ;
rdfs:label "altered resistance to a nucleoside" ;
rdfs:comment "A nucleoside resistance phenotype where resistance of an organism, cell, or cells to a nucleoside is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007134 , obo:OMP_0007358 .
obo:PATO_0000499 a rdfs:Class ;
rdfs:label "decreased duration" ;
rdfs:comment "A duration quality of a process which is relatively low." ;
rdfs:subClassOf obo:PATO_0001309 , obo:PATO_0002302 .
obo:OMP_0008025 a rdfs:Class ;
rdfs:label "absence of an endospore cortex" ;
rdfs:comment "An endospore cortex phenotype where an endospore lacks a cortex." ;
rdfs:subClassOf obo:OMP_0008024 .
obo:OMP_0007495 a rdfs:Class ;
rdfs:label "epoxide resistance phenotype" ;
rdfs:comment "An antimicrobial resistance phenotype relating to resistance or sensitivity to an epoxide. An epoxide is any cyclic ether in which the oxygen atom forms part of a 3-membered ring." ;
rdfs:subClassOf obo:OMP_0000274 .
obo:OMP_0007914 a rdfs:Class ;
rdfs:label "abolished resistance to a chelator" ;
rdfs:subClassOf obo:OMP_0007910 , obo:OMP_0007912 .
obo:OMP_0007418 a rdfs:Class ;
rdfs:label "increased conjugation" ;
rdfs:comment "An altered conjugation phenotype where the frequency, rate, timing, or extent of conjugation is increased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007416 .
obo:OMP_0006176 a rdfs:Class ;
rdfs:label "increased multiple fission" ;
rdfs:comment "An altered multiple fission phenotype where the frequency, rate, timing, or extent of multiple fission is increased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0006174 .
obo:OMP_0007053 a rdfs:Class ;
rdfs:label "increased positive chemotaxis" ;
rdfs:comment "An increased chemotaxis phenotype where the frequency, rate, timing, or extent of positive chemotaxis by a motile microbe is increased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0000505 .
obo:PATO_0002325 a rdfs:Class ;
rdfs:label "onset quality" ;
rdfs:comment "The temporal relation between the start of the process with respect to a reference process." ;
rdfs:subClassOf obo:PATO_0002323 .
obo:OMP_0005170 a rdfs:Class ;
rdfs:label "increased superoxide dismutase activity" ;
rdfs:comment "An altered superoxide dismutase activity phenotype where superoxide dismutase activity is increased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0005168 .
obo:OMP_0000241 a rdfs:Class ;
rdfs:label "decreased colony size" ;
rdfs:comment "A colony size phenotype where colony size is decreased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0006164 .
obo:OMP_0007921 a rdfs:Class ;
rdfs:label "presence of cell size variability within a cell population" ;
rdfs:subClassOf obo:OMP_0007917 .
obo:OMP_0007768 a rdfs:Class ;
rdfs:label "altered septum during vegetative growth" ;
rdfs:comment "A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the position or morphology of all or part of the septum is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007767 .
obo:OMP_0007601 a rdfs:Class ;
rdfs:label "absence of chromosome segregation" ;
rdfs:comment "A chromosome segregation phenotype where replicated chromosome(s) are not apportioned as a set to daughter cells." ;
rdfs:subClassOf obo:OMP_0005047 .
obo:OMP_0005239 a rdfs:Class ;
rdfs:label "altered golgi morphology" ;
rdfs:comment "A golgi apparatus morphology phenotype where the morphology of the golgi apparatus is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0005238 .
obo:OMP_0007673 a rdfs:Class ;
rdfs:label "abolished transport" ;
rdfs:comment "A decreased transport phenotype where transport of a substrate(s) is abolished." ;
rdfs:subClassOf obo:OMP_0007669 , obo:OMP_0007672 .
obo:OMP_0000324 a rdfs:Class ;
rdfs:label "cell perimeter length phenotype" ;
rdfs:subClassOf obo:OMP_0000074 .
obo:OMP_0007741 a rdfs:Class ;
rdfs:label "vegetative cell lysis phenotype" ;
rdfs:comment "A cell lysis phenotype relating to lysis of a cell that is in the vegetative growth phase of the life cycle. In cytolysis the plasma membrane ruptures and cytoplasm is lost." ;
rdfs:subClassOf obo:OMP_0005336 , obo:OMP_0007745 .
obo:OMP_0007109 a rdfs:Class ;
rdfs:label "chemotrophic phenotype" ;
rdfs:comment "An energy metabolism phenotype where energy is obtained from the oxidation of chemicals." ;
rdfs:subClassOf obo:OMP_0000224 .
obo:GO_0006351 a rdfs:Class ;
rdfs:label "transcription, DNA-templated" ;
rdfs:comment "The cellular synthesis of RNA on a template of DNA." ;
rdfs:subClassOf obo:GO_0032774 , obo:GO_0034645 .
obo:OMP_0007582 a rdfs:Class ;
rdfs:label "altered resistance to cold shock" ;
rdfs:comment "A resistance to cold shock phenotype where the resistance or sensitivity of a microbial population to a cold shock is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007572 , obo:OMP_0007578 .
obo:OMP_0005181 a rdfs:Class ;
rdfs:label "altered cytoskeleton morphology phenotype" ;
rdfs:comment "A cytoskeleton morphology phenotype where the morphology of the cytoskeleton is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0005180 , obo:OMP_0007752 .
obo:OMP_0005127 a rdfs:Class ;
rdfs:label "abolished resistance to acidic pH stress" ;
rdfs:comment "A decreased resistance to acidic pH stress phenotype where resistance of microbes in a population to acidic pH is abolished." ;
rdfs:subClassOf obo:OMP_0005077 .
obo:OMP_0005324 a rdfs:Class ;
rdfs:label "altered cell motility by swimming" ;
rdfs:comment "A cell motility by swimming phenotype where the frequency, rate, timing, or extent of swimming is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007001 .
obo:OMP_0006057 a rdfs:Class ;
rdfs:label "decreased resistance to aminoglycoside" ;
rdfs:comment "An altered aminoglycoside resistance phenotype where resistance to an aminoglycoside is decreased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0006017 .
obo:OMP_0000133 a rdfs:Class ;
rdfs:label "absence of motility" ;
rdfs:comment "A motility phenotype where a microbe lacks the ability to perform controlled self-propelled movement that results in translocation of the cell from one place to another." ;
rdfs:subClassOf obo:OMP_0000001 .
obo:OMP_0005355 a rdfs:Class ;
rdfs:label "abolished mating" ;
rdfs:comment "A decreased mating phenotype where sexual reproduction by conjugation is abolished." ;
rdfs:subClassOf obo:OMP_0005354 .
obo:OMP_0007300 a rdfs:Class ;
rdfs:label "altered acid-fast stain" ;
rdfs:comment "An acid-fast stain phenotype where the resistance of a cell or cells to decolorization by an acid-alcohol mixture during staining is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0000199 , obo:OMP_0007304 .
obo:OMP_0007440 a rdfs:Class ;
rdfs:label "absence of sexual reproduction" ;
rdfs:comment "A sexual reproduction phenotype where an organism is not able to reproduce sexually." ;
rdfs:subClassOf obo:OMP_0007406 .
obo:OMP_0006160 a rdfs:Class ;
rdfs:label "abolished outer membrane vesicle" ;
rdfs:comment "A decreased outer membrane vesicle phenotype where the ability to produce outer membrane vesicles is abolished." ;
rdfs:subClassOf obo:OMP_0006109 , obo:OMP_0006159 .
obo:OMP_0007752 a rdfs:Class ;
rdfs:label "altered cytoskeleton" ;
rdfs:comment "A cellular physical quality phenotype in which the amount, distribution, or morphology of all or part of the cytoskeleton is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007751 .
obo:OMP_0007246 a rdfs:Class ;
rdfs:label "not resistant to a chemical" ;
rdfs:comment "A chemical resistance phenotype where a microbe is not resistant to a chemical." ;
rdfs:subClassOf obo:OMP_0007195 .
obo:OMP_0005364 a rdfs:Class ;
rdfs:label "presence of positive osmotaxis" ;
rdfs:comment "A presence of osmotaxis phenotype where a motile microbe displays osmotaxis towards a higher osmotic concentration." ;
rdfs:subClassOf obo:OMP_0005362 .
obo:OMP_0007488 a rdfs:Class ;
rdfs:label "absence of motility by gliding" ;
rdfs:comment "An absence of motility phenotype where a microbe is not capable of gliding motility." ;
rdfs:subClassOf obo:OMP_0000133 .
obo:OMP_0005144 a rdfs:Class ;
rdfs:label "vacuolar morphology phenotype" ;
rdfs:comment "A cell morphology phenotype that relates to the morphology of the vacuole, a closed structure, found primarily in eukaryotic cells, that is completely surrounded by a unit membrane and contains liquid material. Cells contain one or several vacuoles, which may have different functions from each other. Vacuoles have a diverse array of functions." ;
rdfs:subClassOf obo:OMP_0000071 .
obo:OMP_0000286 a rdfs:Class ;
rdfs:label "increased cell population growth yield" ;
rdfs:subClassOf obo:OMP_0000284 .
obo:OMP_0007531 a rdfs:Class ;
rdfs:label "increased lethality in an amoeba host" ;
rdfs:comment "An altered lethality in an amoeba phenotype where the ability of an infectious microbe to cause death of an amoeba host is increased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007527 .
obo:OMP_0007805 a rdfs:Class ;
rdfs:label "increased cell population viability upon starvation" ;
rdfs:comment "An altered cell population viability phenotype where the proportion of cells that survive starvation for one or more essential nutrients is increased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007804 .
obo:OMP_0007671 a rdfs:Class ;
rdfs:label "increased transport" ;
rdfs:comment "An altered transport phenotype where transport of a substrate(s) is increased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007670 .
obo:OMP_0007750 a rdfs:Class ;
rdfs:label "subcellular component phenotype" ;
rdfs:comment "A cellular physical quality phenotype relating to the amount, distribution, composition, or morphology of a microbial cell part." ;
rdfs:subClassOf obo:OMP_0007633 .
obo:PATO_0002182 a rdfs:Class ;
rdfs:label "molecular quality" ;
rdfs:comment "A quality which inheres in a molecular entity, a single molecule, atom, ion, radical etc." ;
rdfs:subClassOf obo:PATO_0001241 .
obo:OMP_0000234 a rdfs:Class ;
rdfs:label "butyrous colony consistency" ;
rdfs:comment "A colony consistency phenotype where a colony or colonies have a butter-like consistency." ;
rdfs:subClassOf obo:OMP_0000229 .
obo:GO_0048519 a rdfs:Class ;
rdfs:label "negative regulation of biological process" ;
rdfs:comment "Any process that stops, prevents, or reduces the frequency, rate or extent of a biological process. Biological processes are regulated by many means; examples include the control of gene expression, protein modification or interaction with a protein or substrate molecule." ;
rdfs:subClassOf obo:GO_0050789 .
obo:PATO_0000918 a rdfs:Class ;
rdfs:label "volume" ;
rdfs:comment "A 3-D extent quality inhering in a bearer by virtue of the bearer's amount of 3-dimensional space it occupies." ;
rdfs:subClassOf obo:PATO_0001710 .
obo:OMP_0000094 a rdfs:Class ;
rdfs:label "endospore formation phenotype" ;
rdfs:comment "A sporulation phenotype where development concerns formation of an endospore, a dormant, highly resistant spore with a thick wall that forms within the mother cell." ;
rdfs:subClassOf obo:OMP_0000091 , obo:OMP_0007142 .
obo:OMP_0007236 a rdfs:Class ;
rdfs:label "absence of asexual sporulation" ;
rdfs:comment "An asexual sporulation phenotype where an organism lacks the ability to multiple by the formation of mitotic spores." ;
rdfs:subClassOf obo:OMP_0007142 .
obo:PATO_0000701 a rdfs:Class ;
rdfs:label "smooth" ;
rdfs:comment "A texture quality inhering in a bearer by virtue of the bearer's processing a surface free of roughness or irregularities." ;
rdfs:subClassOf obo:PATO_0000150 .
obo:OMP_0007790 a rdfs:Class ;
rdfs:label "decreased frequency of cell separation after cell division during vegetative growth" ;
rdfs:comment "A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the frequency of cell separation after cell division is decreased and results in the formation of chains of cells." ;
rdfs:subClassOf obo:OMP_0007788 .
obo:OMP_0005097 a rdfs:Class ;
rdfs:label "increased resistance to UV radiation" ;
rdfs:comment "An altered UV-radiation resistance phenotype where the resistance of microbes in a population to UV radiation is increased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0005125 .
obo:OMP_0007117 a rdfs:Class ;
rdfs:label "increased transcription of gene or operon" ;
rdfs:comment "An altered transcription phenotype where transcription of a gene or genes is increased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007108 .
obo:OMP_0007974 a rdfs:Class ;
rdfs:label "decreased tolerance to an antimicrobial agent" ;
rdfs:comment "An altered tolerance to an antimicrobial agent phenotype where minimum duration of killing is decreased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007972 .
obo:OMP_0007203 a rdfs:Class ;
rdfs:label "altered gene expression regulation" ;
rdfs:comment "A gene expression regulation phenotype that is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007085 , obo:OMP_0007162 .
obo:OMP_0007520 a rdfs:Class ;
rdfs:label "increased population growth in high osmolarity" ;
rdfs:comment "An altered population growth in high osmolarity phenotype where growth of a microbial population in conditions of high osmolarity is increased relative to a designated control. Increased growth may reflect an increased growth rate (i.e., faster growth), increased growth yield, or both." ;
rdfs:subClassOf obo:OMP_0007519 .
obo:OMP_0007298 a rdfs:Class ;
rdfs:label "presence of acid-fast stain" ;
rdfs:comment "An acid-fast stain phenotype where a cell or cells that have been stained, typically with carbolfuchsin, are not easily decolorized by acid--alcohol." ;
rdfs:subClassOf obo:OMP_0000199 .
obo:OMP_0007660 a rdfs:Class ;
rdfs:label "altered level of cellular reactive oxygen species" ;
rdfs:comment "A cell phenotype where the amount of reactive oxygen species (ROS) measured in a cell is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007657 .
obo:OMP_0007753 a rdfs:Class ;
rdfs:label "altered actin cytoskeleton" ;
rdfs:comment "A cellular physical phenotype in which the amount, distribution, or morphology of all or part of the actin cytoskeleton is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007752 .
obo:OMP_0005010 a rdfs:Class ;
rdfs:label "neutrophile" ;
rdfs:comment "A population growth phenotype that applies to microorganisms whose optimal growth occurs between pH 5.5 and 8.0." ;
rdfs:subClassOf obo:OMP_0005008 .
obo:OMP_0005347 a rdfs:Class ;
rdfs:label "increased resistance to organic aromatic compounds" ;
rdfs:comment "An altered organic aromatic compound resistance phenotype where resistance to one or more organic aromatic compounds is increased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0005344 .
obo:OMP_0008053 a rdfs:Class ;
rdfs:label "clearer plaque appearance" ;
rdfs:comment "An altered bacteriophage plaque morphology phenotype where the appearance of viral plaque is clearer relative to a designated control." ;
rdfs:subClassOf obo:OMP_0008051 .
obo:OMP_0007634 a rdfs:Class ;
rdfs:label "altered level of substance in cell" ;
rdfs:comment "A cell phenotype in which the amount of a specific substance measured in a cell is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007637 , obo:OMP_0007656 .
obo:GO_0010467 a rdfs:Class ;
rdfs:label "gene expression" ;
rdfs:comment "The process in which a gene's sequence is converted into a mature gene product or products (proteins or RNA). This includes the production of an RNA transcript as well as any processing to produce a mature RNA product or an mRNA (for protein-coding genes) and the translation of that mRNA into protein. Some protein processing events may be included when they are required to form an active form of a product from an inactive precursor form." ;
rdfs:subClassOf obo:GO_0043170 .
obo:OMP_0001002 a rdfs:Class ;
rdfs:label "decreased negative supercoiling" ;
rdfs:comment "An altered DNA supercoiling phenotype where negative supercoiling is decreased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0006126 .
obo:OMP_0006032 a rdfs:Class ;
rdfs:label "altered pteridine resistance" ;
rdfs:comment "A pteridine resistance phenotype where resistance to a pteridine compound is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007065 , obo:OMP_0007134 .
obo:OMP_0007284 a rdfs:Class ;
rdfs:label "presence of virulence" ;
rdfs:comment "A virulence phenotype where a microbe possesses the ability to cause disease in another organism (the host)." ;
rdfs:subClassOf obo:OMP_0000068 .
obo:OMP_0000505 a rdfs:Class ;
rdfs:label "increased chemotaxis" ;
rdfs:comment "An altered chemotaxis phenotype where the frequency, rate, timing, or extent of chemotaxis by a motile microbe is increased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007077 .
obo:OMP_0005015 a rdfs:Class ;
rdfs:label "osmotolerant growth" ;
rdfs:comment "A solute and water activity phenotype where growth and proliferation can occur over wide ranges of water activity or osmotic concentration." ;
rdfs:subClassOf obo:OMP_0005013 .
obo:PATO_0001457 a rdfs:Class ;
rdfs:label "sensitivity of a process" ;
rdfs:comment "A quality of a process inhering in bearer by virtue of the bearer's disposition to respond to stimulation." ;
rdfs:subClassOf obo:PATO_0002062 .
obo:OMP_0007220 a rdfs:Class ;
rdfs:label "increased resistance to rifamycin" ;
rdfs:comment "An altered rifamycin resistance phenotype where resistance to one or more rifamycins is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007216 .
obo:OMP_0007403 a rdfs:Class ;
rdfs:label "altered microbe-host interaction" ;
rdfs:comment "A microbe-host interaction phenotype where the frequency, rate, timing, or extent of interaction is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0000197 , obo:OMP_0007085 .
obo:OMP_0000144 a rdfs:Class ;
rdfs:label "multiple nucleoids" ;
rdfs:comment "A nucleoid number phenotype where there is more than one nucleoid regions in the cell." ;
rdfs:subClassOf obo:OMP_0000043 .
obo:OMP_0000209 a rdfs:Class ;
rdfs:label "fluorescent colony" ;
rdfs:comment "A colony pigmentation phenotype where the prominent morphological characteristic of the colony(ies) is the presence of fluorescence." ;
rdfs:subClassOf obo:OMP_0000107 .
obo:OMP_0000083 a rdfs:Class ;
rdfs:label "cell projection morphology phenotype" ;
rdfs:comment "A cell morphology phenotype relating to the size, shape, or appearance of a structure that is a prolongation or process extending from a cell." ;
rdfs:subClassOf obo:OMP_0000071 .
obo:OMP_0007067 a rdfs:Class ;
rdfs:label "binary fission phenotype" ;
rdfs:comment "An asexual reproduction phenotype related to the process of binary fission, where a parental cell divides into two daughter cells of approximately equal size and shape." ;
rdfs:subClassOf obo:OMP_0007066 .
obo:OMP_0000313 a rdfs:Class ;
rdfs:label "increased correlation between nucleoid and cell constriction during cell division" ;
rdfs:subClassOf obo:OMP_0000303 .
obo:OMP_0000266 a rdfs:Class ;
rdfs:label "altered cell population growth rate" ;
rdfs:subClassOf obo:OMP_0007809 , obo:OMP_0007810 .
obo:GO_0008152 a rdfs:Class ;
rdfs:label "metabolic process" ;
rdfs:comment "The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation." ;
rdfs:subClassOf obo:GO_0008150 .
obo:OMP_0000158 a rdfs:Class ;
rdfs:label "curled margin" ;
rdfs:comment "A colony margin phenotype characterized by growth that appears as waves or curls along the edge of the colony." ;
rdfs:subClassOf obo:OMP_0000149 .
obo:OMP_0007147 a rdfs:Class ;
rdfs:label "altered DNA replication" ;
rdfs:comment "A DNA replication phenotype in which the process of DNA replication is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0000307 , obo:OMP_0005136 , obo:OMP_0007351 .
obo:OMP_0005369 a rdfs:Class ;
rdfs:label "absence of positive osmotaxis" ;
rdfs:comment "A presence of osmotaxis phenotype where an organism doesn't display positive osmotaxis." ;
rdfs:subClassOf obo:OMP_0005363 .
obo:OMP_0007743 a rdfs:Class ;
rdfs:label "absence of vegetative cell lysis" ;
rdfs:comment "A vegetative cell lysis phenotype where cytolysis of a cell in the vegetative growth phase of the life cycle does not occur." ;
rdfs:subClassOf obo:OMP_0007741 .
obo:OMP_0007952 a rdfs:Class ;
rdfs:label "altered population growth at high temperature" ;
rdfs:comment "A population growth phenotype where the rate and/or extent of growth of a microbial population at a temperature that is towards the upper end of the organism's temperature growth range is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0005002 , obo:OMP_0007523 .
obo:OMP_0007260 a rdfs:Class ;
rdfs:label "altered microbial cell viability" ;
rdfs:comment "A cell viability phenotype where under the specified conditions the viability of a microbial cell is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007259 , obo:OMP_0007637 .
obo:OMP_0008058 a rdfs:Class ;
rdfs:label "plaque appearance phenotype" ;
rdfs:comment "A bacteriophage plaque morphology phenotype where bacteria shows an appearance of the viral plaque." ;
rdfs:subClassOf obo:OMP_0008057 .
obo:OMP_0007713 a rdfs:Class ;
rdfs:label "altered vegetative cell size" ;
rdfs:comment "An xx phenotype observed in the vegetative growth phase of the life cycle in which the volume or dimensions of a microbial cell are altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007083 , obo:OMP_0007715 .
obo:OMP_0007331 a rdfs:Class ;
rdfs:label "abolished apoptosis" ;
rdfs:comment "A decreased apoptosis phenotype where the ability of a cell or cells to undergo apoptosis is abolished." ;
rdfs:subClassOf obo:OMP_0007313 .
obo:OMP_0006038 a rdfs:Class ;
rdfs:label "not resistant to macrolide" ;
rdfs:comment "A macrolide compound resistance phenotype where an organism or cell is sensitive to one or more macrolide compounds." ;
rdfs:subClassOf obo:OMP_0000321 .
obo:OMP_0005204 a rdfs:Class ;
rdfs:label "abolished alpha-1,3-mannosyltransferase activity" ;
rdfs:comment "An altered alpha-1,3-mannosyltransferase activity phenotype where alpha-1,3- mannosyltransferase activity is abolished." ;
rdfs:subClassOf obo:OMP_0005200 , obo:OMP_0005201 .
obo:OMP_0005387 a rdfs:Class ;
rdfs:label "presence of long tail" ;
rdfs:comment "A tail length phenotype ranging from 110 nm to 300 nm." ;
rdfs:subClassOf obo:OMP_0005383 .
obo:PATO_0000033 a rdfs:Class ;
rdfs:label "concentration of" ;
rdfs:comment "A quality inhering in a substance by virtue of the amount of the bearer's there is mixed with another substance." ;
rdfs:subClassOf obo:PATO_0002182 .
obo:OMP_0000277 a rdfs:Class ;
rdfs:label "altered cell perimeter length variability" ;
rdfs:subClassOf obo:OMP_0000281 , obo:OMP_0007083 , obo:OMP_0007918 .
obo:OMP_0007081 a rdfs:Class ;
rdfs:label "altered purine requirement" ;
rdfs:comment "An altered growth factor requirement phenotype where the requirement for a purine base as a growth factor is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007039 , obo:OMP_0007079 .
obo:OMP_0006165 a rdfs:Class ;
rdfs:label "cylindrical akinete" ;
rdfs:comment "An akinete morphology phenotype where the organism forms a cylindrical akinete." ;
rdfs:subClassOf obo:OMP_0007409 .
obo:OMP_0005002 a rdfs:Class ;
rdfs:label "temperature effects on population growth phenotype" ;
rdfs:comment "A population growth range phenotype related to how growth of a microbial population is affected by the temperature of the environment." ;
rdfs:subClassOf obo:OMP_0007192 .
obo:OMP_0006110 a rdfs:Class ;
rdfs:label "abolished endospore formation" ;
rdfs:comment "A decreased endospore formation phenotype where the rate, frequency, timing, or extent of endospore formation is abolished." ;
rdfs:subClassOf obo:OMP_0000013 , obo:OMP_0000018 .
obo:OMP_0007313 a rdfs:Class ;
rdfs:label "decreased apoptosis" ;
rdfs:comment "An altered apoptosis phenotype where the occurrence of apoptosis is decreased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007312 .
obo:PATO_0000947 a rdfs:Class ;
rdfs:label "elliptic" ;
rdfs:comment "A spheroid quality inhering in a bearer by virtue of the bearer's being oval with two axes of symmetry, as produced by a conical section." ;
rdfs:subClassOf obo:PATO_0002318 .
obo:OMP_0007295 a rdfs:Class ;
rdfs:label "presence of diazonium blue B staining" ;
rdfs:comment "A diazonium blue B staining phenotype where cells appear pink to red or violet after staining with diazonium blue B." ;
rdfs:subClassOf obo:OMP_0007294 .
obo:OMP_0005293 a rdfs:Class ;
rdfs:label "decreased colonization of tissue in an immunocompromised host" ;
rdfs:comment "An altered colonization of tissue in an immunocompromised host phenotype where the frequency rate, timing, or extent of colonization of tissue is decreased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0005291 .
obo:OMP_0006116 a rdfs:Class ;
rdfs:label "abolished population growth at acidic pH" ;
rdfs:comment "An altered population growth phenotype where growth of a microbial population at acidic pH (< pH 7) is abolished." ;
rdfs:subClassOf obo:OMP_0007008 .
obo:OMP_0007754 a rdfs:Class ;
rdfs:label "cytoskeleton phenotype" ;
rdfs:comment "A cellular physical quality phenotype relating to the amount, distribution, composition, or morphology of the cytoskeleton of a microbial cell." ;
rdfs:subClassOf obo:OMP_0007750 .
obo:OMP_0005076 a rdfs:Class ;
rdfs:label "increased resistance to acidic pH stress" ;
rdfs:comment "An altered acidic pH stress phenotype were resistance of microbes in a population to acidic pH is increased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0005118 .
obo:OMP_0006094 a rdfs:Class ;
rdfs:label "abolished decarboxylase activity" ;
rdfs:comment "A decreased decarboxylase activity phenotype where decarboxylase activity is abolished." ;
rdfs:subClassOf obo:OMP_0006078 , obo:OMP_0006082 .
obo:OMP_0006046 a rdfs:Class ;
rdfs:label "not resistant to beta-lactam" ;
rdfs:comment "A beta-lactam compound resistance phenotype where an organism or cell is sensitive to one or more beta-lactam compounds." ;
rdfs:subClassOf obo:OMP_0000336 .
obo:OMP_0007342 a rdfs:Class ;
rdfs:label "altered cellular process" ;
rdfs:comment "A cellular process phenotype where a cellular process is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007332 , obo:OMP_0007351 .
obo:OMP_0000147 a rdfs:Class ;
rdfs:label "polar nucleoid localization" ;
rdfs:comment "A nucleoid localization phenotype where the nucleoid is located in one of the polar regions of the cell." ;
rdfs:subClassOf obo:OMP_0000145 .
obo:OMP_0007972 a rdfs:Class ;
rdfs:label "altered tolerance to an antimicrobial agent phenotype" ;
rdfs:comment "An antimicrobial agent tolerance phenotype where tolerance, the ability to survive transient exposure to an antimicrobial agent, is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007971 .
obo:OMP_0007699 a rdfs:Class ;
rdfs:label "nonviable cell population" ;
rdfs:comment "A cell population phenotype in which none of the cells in the population are viable." ;
rdfs:subClassOf obo:OMP_0007705 .
obo:OMP_0005281 a rdfs:Class ;
rdfs:label "colonization of host tissue phenotype" ;
rdfs:comment "A colonization of a host phenotype relating to the ability of a microbe to colonize a host tissue." ;
rdfs:subClassOf obo:OMP_0007252 .
obo:OMP_0005122 a rdfs:Class ;
rdfs:label "altered resistance to oxidative stress" ;
rdfs:comment "A resistance to oxidative stress phenotype where the resistance or sensitivity that microbes in a population show to an oxidative stress is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007569 , obo:OMP_0007572 .
obo:PATO_0001551 a rdfs:Class ;
rdfs:label "increased sensitivity of a process" ;
rdfs:comment "A sensitivity of a process which is higher than normal or average." ;
rdfs:subClassOf obo:PATO_0001457 , obo:PATO_0002304 .
obo:OMP_0007697 a rdfs:Class ;
rdfs:label "abolished vegetative cell growth" ;
rdfs:comment "A decreased vegetative cell growth phenotype in which growth of the cell in the vegetative growth phase of the life cycle is abolished." ;
rdfs:subClassOf obo:OMP_0007693 , obo:OMP_0007696 .
obo:OMP_0005210 a rdfs:Class ;
rdfs:label "decreased adhesion to host" ;
rdfs:comment "An altered adhesion to host phenotype where the frequency, rate, or extent of attachment of a microbe to a host is decreased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0005209 .
obo:OMP_0000335 a rdfs:Class ;
rdfs:label "decreased resistance to aminopyrimidine" ;
rdfs:comment "An aminopyrimidine resistance phenotype where resistance is decreased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0006018 .
obo:OMP_0000110 a rdfs:Class ;
rdfs:label "opaque colony" ;
rdfs:comment "A colony opacity phenotype characterized by inability of light to pass through it." ;
rdfs:subClassOf obo:OMP_0000102 .
obo:OMP_0007800 a rdfs:Class ;
rdfs:label "polyether antimicrobial resistance phenotype" ;
rdfs:comment """This term and its children were deemed to be too granular. Instead, use one of the children of OMP:0000274 antimicrobial agent resistance phenotype and enter database identifier for A22 in the Annotation Extension field.
OMP:0007876 resistant to an antimicrobial agent
OMP:0007877 not resistant to an antimicrobial agent
OMP:0007134 altered resistance to an antimicrobial agent
OMP:0007878 increased resistance to an antimicrobial agent
OMP:000 7879 decreased resistance to an antimicrobial agent
OMP:0007880 abolished resistance to an antimicrobial agent""" .
obo:OMP_0007263 a rdfs:Class ;
rdfs:label "viable but nonculturable cell" ;
rdfs:subClassOf obo:OMP_0007260 .
obo:OMP_0006058 a rdfs:Class ;
rdfs:label "increased resistance to aminoglycoside" ;
rdfs:comment "An altered aminoglycoside compound resistance phenotype where resistance is increased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0006017 .
obo:OMP_0007428 a rdfs:Class ;
rdfs:label "abolished schizogeny" ;
rdfs:comment "A decreased schizogeny phenotype where the rate, frequency, timing, or extent of schizogeny is abolished." ;
rdfs:subClassOf obo:OMP_0007425 , obo:OMP_0007427 .
obo:OMP_0007602 a rdfs:Class ;
rdfs:label "DNA break phenotype" ;
rdfs:comment "A genetic material phenotype related to the occurrence of DNA breaks in chromosomal DNA." ;
rdfs:subClassOf obo:OMP_0000290 .
obo:OMP_0005223 a rdfs:Class ;
rdfs:label "decreased cell fusion" ;
rdfs:comment "An altered cell fusion phenotype where the frequency, rate, timing, or extent of fusion is decreased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0005221 .
obo:OMP_0007161 a rdfs:Class ;
rdfs:label "regulation phenotype" ;
rdfs:comment "A microbial phenotype that affects the regulation of a molecular function, biological process, or biological quality." ;
rdfs:subClassOf obo:OMP_0000000 .
obo:OMP_0000223 a rdfs:Class ;
rdfs:label "decreased cell aspect ratio" ;
rdfs:comment "An altered cell aspect ratio phenotype where the cell aspect ratio (cell diameter/cell length) of a microbial cell is decreased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0000193 .
obo:OMP_0005159 a rdfs:Class ;
rdfs:label "presence of protein kinase A activity" ;
rdfs:comment "A protein kinase A phenotype where an organism exhibits protein kinase A activity." ;
rdfs:subClassOf obo:OMP_0005154 .
obo:OMP_0007563 a rdfs:Class ;
rdfs:label "absence of meiotic nuclear division" ;
rdfs:comment "A meiotic nuclear division phenotype in which both the first and second meiotic nuclear divisions are absent." ;
rdfs:subClassOf obo:OMP_0007561 .
obo:OMP_0007194 a rdfs:Class ;
rdfs:label "biological process phenotype" ;
rdfs:comment "A microbial phenotype that affects a biological process." ;
rdfs:subClassOf obo:OMP_0000000 .
obo:OMP_0007498 a rdfs:Class ;
rdfs:label "altered epoxide resistance" ;
rdfs:comment "An epoxide resistance phenotype where the frequency, rate, timing, or extent of resistance to an epoxide is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007134 , obo:OMP_0007495 .
obo:OMP_0007476 a rdfs:Class ;
rdfs:label "not resistant to phenols" ;
rdfs:comment "A phenols resistance phenotype where an organism or cell is sensitive to phenols." ;
rdfs:subClassOf obo:OMP_0007474 .
obo:OMP_0007963 a rdfs:Class ;
rdfs:label "absence of cell population growth during nutrient limitation" ;
rdfs:comment "A cell population growth phenotype where growth of a microbial population doesn't occur under conditions of limitation for an essential nutrient (i.e. conditions where an essential nutrient is at present low concentration)." ;
rdfs:subClassOf obo:OMP_0007964 .
obo:OMP_0007617 a rdfs:Class ;
rdfs:label "Holliday junction structure phenotype" ;
rdfs:comment "A genetic material phenotype related to the occurrence of Holliday junction structures in chromosomal DNA." ;
rdfs:subClassOf obo:OMP_0000290 .
obo:OMP_0007596 a rdfs:Class ;
rdfs:label "absence of population growth" ;
rdfs:comment "A population growth phenotype where the number of individuals in a microbial population does not increase." ;
rdfs:subClassOf obo:OMP_0007167 .
obo:OMP_0007075 a rdfs:Class ;
rdfs:label "decreased growth factor requirement" ;
rdfs:comment "A growth factor requirement phenotype where the requirement for one or more growth factors is decreased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007079 .
obo:OMP_0007443 a rdfs:Class ;
rdfs:label "presence of lethality in immunocompromised mice" ;
rdfs:comment "A presence of lethality phenotype where infection by a microbe can cause death of an immunocompromised mouse (or mice) (Mus musculus)." ;
rdfs:subClassOf obo:OMP_0007395 .
obo:OMP_0005221 a rdfs:Class ;
rdfs:label "altered cell fusion" ;
rdfs:comment "A cell fusion phenotype where the frequency, rate, timing, or extent of cell fusion is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0005219 .
obo:OMP_0000056 a rdfs:Class ;
rdfs:label "presence of positive aerotaxis" ;
rdfs:comment "A presence of aerotaxis phenotype where a motile cell or organism displays directed movement towards a higher concentration of environmental oxygen." ;
rdfs:subClassOf obo:OMP_0000049 .
obo:GO_0034301 a rdfs:Class ;
rdfs:label "endospore formation" ;
rdfs:comment "The process in which a cell gives rise to an endospore, a dormant, highly resistant spore with a thick wall that forms within the mother cell. Endospores are produced by some low G+C Gram-positive bacteria in response to harsh conditions." ;
rdfs:subClassOf obo:GO_0043936 .
obo:CHEBI_24432 a rdfs:Class ;
rdfs:label "biological role" ;
rdfs:comment "A role played by the molecular entity or part thereof within a biological context." ;
rdfs:subClassOf obo:CHEBI_50906 .
obo:OMP_0005148 a rdfs:Class ;
rdfs:label "ferric reductase activity phenotype" ;
rdfs:comment "An enzymatic activity phenotype that relates to the presence or absence of ferric reductase, a class of flavin reductases. Ferric reductases act on ferric iron to reduce it by using NADH or NADPH as the electron donor." ;
rdfs:subClassOf obo:OMP_0000221 .
obo:OMP_0007657 a rdfs:Class ;
rdfs:label "level of cellular reactive oxygen species phenotype" ;
rdfs:comment "A cell phenotype relating to the amount of reactive oxygen species (ROS) measured in a cell." ;
rdfs:subClassOf obo:OMP_0007656 .
obo:OMP_0000026 a rdfs:Class ;
rdfs:label "host-virus interaction phenotype" ;
rdfs:comment "A microbial phenotype related to the ability of a host to be infected by and/or support reproduction of a virus." ;
rdfs:subClassOf obo:OMP_0000000 .
obo:OMP_0007924 a rdfs:Class ;
rdfs:label "increased cell size variability within a cell population" ;
rdfs:subClassOf obo:OMP_0007918 .
obo:OMP_0000060 a rdfs:Class ;
rdfs:label "presence of quorum sensing" ;
rdfs:comment "A quorum sensing phenotype where an organism possesses the ability to monitor its population density by detecting the concentration of small, diffusible signal molecules." ;
rdfs:subClassOf obo:OMP_0000069 .
obo:OMP_0007817 a rdfs:Class ;
rdfs:label "decreased cellular pigment accumulation" ;
rdfs:comment "An altered cellular pigment accumulation phenotype where the rate, extent, or timing of the process of pigment accumulation by a microbial cell or cells is decreased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007814 .
obo:OMP_0007507 a rdfs:Class ;
rdfs:label "presence of titan cells" ;
rdfs:comment "A titan cell phenotype where a microbe is able to form titan cells." ;
rdfs:subClassOf obo:OMP_0007506 .
obo:PATO_0000133 a rdfs:Class ;
rdfs:label "orientation" ;
rdfs:comment "A spatial quality inhering in a bearer by virtue of the bearer's placement which is defined by the angle between the bearer and an axis, or the angle between the bearer and another object." ;
rdfs:subClassOf obo:PATO_0000140 .
obo:OMP_0000367 a rdfs:Class ;
rdfs:label "nucleoid area variability phenotype" ;
rdfs:subClassOf obo:OMP_0000272 .
obo:OMP_0007955 a rdfs:Class ;
rdfs:label "abolished population growth at high temperature" ;
rdfs:subClassOf obo:OMP_0007954 .
obo:OMP_0006063 a rdfs:Class ;
rdfs:label "increased resistance to tetracycline" ;
rdfs:comment "A tetracycline compound resistance phenotype where resistance to a tetracycline compound is increased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0005029 .
obo:OMP_0005227 a rdfs:Class ;
rdfs:label "presence of cell fusion during mating" ;
rdfs:comment "A cell fusion during mating phenotype where individual cells from each partner fuse during mating." ;
rdfs:subClassOf obo:OMP_0005226 .
obo:OMP_0007944 a rdfs:Class ;
rdfs:label "abolished survival in macrophage" ;
rdfs:subClassOf obo:OMP_0007453 , obo:OMP_0007943 .
obo:PATO_0001908 a rdfs:Class ;
rdfs:label "multinucleate" ;
rdfs:comment "A nucleate quality inhering in a bearer by virtue of the bearer's having more than one nucleus." ;
rdfs:subClassOf obo:PATO_0002505 .
obo:OMP_0005087 a rdfs:Class ;
rdfs:label "increased resistance to dessication stress" ;
rdfs:comment "An altered dessication stress phenotype where resistance of microbes in a population to dessication stress is increased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0005120 .
obo:OMP_0005238 a rdfs:Class ;
rdfs:label "golgi apparatus morphology phenotype" ;
rdfs:comment "A golgi apparatus phenotype that relates to the size, shape, or appearance of the Golgi apparatus or its parts. The golgi apparatus usually appears as flattened ribosome-free vesicles arranged in a more or less regular stack." ;
rdfs:subClassOf obo:OMP_0005237 .
obo:OMP_0000251 a rdfs:Class ;
rdfs:label "altered cell division ratio variability" ;
rdfs:subClassOf obo:OMP_0000250 , obo:OMP_0000281 .
obo:OMP_0000071 a rdfs:Class ;
rdfs:label "cell morphology phenotype" ;
rdfs:comment "A microbial phenotype related to the form and structure of a microbial cell." ;
rdfs:subClassOf obo:OMP_0000000 , obo:OMP_0007197 , obo:OMP_0007633 .
obo:OMP_0005394 a rdfs:Class ;
rdfs:label "polyhedral shape" ;
rdfs:comment "A capsid morphology phenotype where the capsid is shaped like a polyhedron which is a solid formed by plane faces." ;
rdfs:subClassOf obo:OMP_0005386 .
obo:OMP_0007801 a rdfs:Class ;
rdfs:label "altered vegetative cell population growth rate" ;
rdfs:subClassOf obo:OMP_0007115 .
obo:OMP_0008009 a rdfs:Class ;
rdfs:label "presence of an endospore coat" ;
rdfs:comment "An endospore coat phenotype where an endospore has a coat layer." ;
rdfs:subClassOf obo:OMP_0008007 .
obo:PATO_0002323 a rdfs:Class ;
rdfs:label "temporal distribution quality" ;
rdfs:comment "A temporal distribution pattern of process occurrences within a regulation/reference process." ;
rdfs:subClassOf obo:PATO_0002062 .
obo:OMP_0007024 a rdfs:Class ;
rdfs:label "increased vitamin/enzyme cofactor requirement" ;
rdfs:comment "A vitamin/enzyme cofactor requirement phenotype the requirement for a vitamin/enzyme cofactor is increased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007074 , obo:OMP_0007082 .
obo:OMP_0005111 a rdfs:Class ;
rdfs:label "resistance to killing by host phenotype" ;
rdfs:comment "A microbe-host interaction phenotype relating to the resistance or sensitivity of a microbe to killing by a host." ;
rdfs:subClassOf obo:OMP_0000197 .
obo:OMP_0006074 a rdfs:Class ;
rdfs:label "increased resistance to pteridine" ;
rdfs:comment "A pteridine resistance phenotype where resistance to a pteridine compound is increased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0006032 .
obo:OMP_0000037 a rdfs:Class ;
rdfs:label "increased flagellum length" ;
rdfs:comment "An altered flagellum length phenotype where the length of the flagellum is longer than a designated control." ;
rdfs:subClassOf obo:OMP_0000024 .
obo:OMP_0007034 a rdfs:Class ;
rdfs:label "utilization of inorganic nitrogen phenotype" ;
rdfs:comment "An inorganic nitrogen source utilization phenotype where an inorganic N-containing compound can be used as a nitrogen source." ;
rdfs:subClassOf obo:OMP_0007013 .
obo:OMP_0007806 a rdfs:Class ;
rdfs:label "increased cell population viability upon nitrogen starvation" ;
rdfs:comment "An altered cell population viability phenotype where the proportion of cells that survive nitrogen starvation is increased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007805 .
obo:OMP_0007544 a rdfs:Class ;
rdfs:label "absence of haploid fruiting" ;
rdfs:comment "A haploid fruiting phenotype where a microbe is unable to reproduce by the process of haploid fruiting." ;
rdfs:subClassOf obo:OMP_0007542 .
obo:OMP_0007454 a rdfs:Class ;
rdfs:label "altered survival in macrophage" ;
rdfs:subClassOf obo:OMP_0007403 , obo:OMP_0007455 .
obo:OMP_0000389 a rdfs:Class ;
rdfs:label "abolished cell-cell self recognition" ;
rdfs:subClassOf obo:OMP_0000388 .
obo:OMP_0005185 a rdfs:Class ;
rdfs:label "altered actin cytoskeleton morphology" ;
rdfs:comment "An altered actin cytoskeleton phenotype where the size, shape, or structure of the actin cytoskeleton is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0005181 , obo:OMP_0005182 , obo:OMP_0007753 .
obo:OMP_0000149 a rdfs:Class ;
rdfs:label "colony margin phenotype" ;
rdfs:comment "A colony morphology phenotype dealing with the shape of the edge of a colony viewed with magnification." ;
rdfs:subClassOf obo:OMP_0000100 .
obo:OMP_0007201 a rdfs:Class ;
rdfs:label "decreased resistance to UV-C radiation" ;
rdfs:comment "A decreased resistance to UV-radiation resistance phenotype where the resistance of microbes in a population to UV-C radiation (typically, 100-280 nm) is decreased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0005098 .
obo:PATO_0000719 a rdfs:Class ;
rdfs:label "viable" ;
rdfs:comment "A viability quality inhering in a bearer or a population by virtue of the bearer's ability to survive or the long term survival ability of a given population." ;
rdfs:subClassOf obo:PATO_0000169 .
obo:OMP_0007811 a rdfs:Class ;
rdfs:label "cellular pigment accumulation phenotype" ;
rdfs:comment "A cellular process phenotype that affects the occurrence of pigment accumulation in a microbial cell." ;
rdfs:subClassOf obo:OMP_0007332 .
obo:OMP_0000341 a rdfs:Class ;
rdfs:label "cell shape variability phenotype" ;
rdfs:comment "A cell population phenotype where the trait is variability in cell shape within a microbial cell population." ;
rdfs:subClassOf obo:OMP_0000272 .
obo:OMP_0007732 a rdfs:Class ;
rdfs:label "septation index phenotype" ;
rdfs:comment "A cell population phenotype relating to the septation index of the population. The septation index is the proportion of the population undergoing septation at any given time." ;
rdfs:subClassOf obo:OMP_0007698 .
obo:PATO_0002266 a rdfs:Class ;
rdfs:label "3-D shape" ;
rdfs:comment "A shape that inheres in a 3 dimensional entity." ;
rdfs:subClassOf obo:PATO_0000052 .
obo:OMP_0000250 a rdfs:Class ;
rdfs:label "altered cell division" ;
rdfs:comment "A cellular process phenotype observed in the vegetative growth phase of the life cycle in which cell division is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007784 .
obo:OMP_0006024 a rdfs:Class ;
rdfs:label "presence of organic carbon source utilization" ;
rdfs:comment "A carbon source utilization phenotype where a microorganism is able to utilize an organic molecule as its carbon source." ;
rdfs:subClassOf obo:OMP_0006023 .
obo:OMP_0007585 a rdfs:Class ;
rdfs:label "altered resistance to heat" ;
rdfs:comment "A resistance to heat shock phenotype where the resistance or sensitivity of a microbial population to heat shock is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007572 , obo:OMP_0007579 .
obo:OMP_0005174 a rdfs:Class ;
rdfs:label "presence of acid phosphatase activity" ;
rdfs:comment "An acid phosphatase activity phenotype where a cell or cells exhibits acid phosphatase activity." ;
rdfs:subClassOf obo:OMP_0005173 .
obo:OMP_0005360 a rdfs:Class ;
rdfs:label "abolished mating efficiency" ;
rdfs:comment "A decreased mating efficiency phenotype where mating is abolished." ;
rdfs:subClassOf obo:OMP_0005359 .
obo:OMP_0005270 a rdfs:Class ;
rdfs:label "endomembrane system morphology phenotype" ;
rdfs:comment "An endomembrane system phenotype that relates to the form and structure of components of the endomembrane system." ;
rdfs:subClassOf obo:OMP_0005269 .
obo:OMP_0007569 a rdfs:Class ;
rdfs:label "resistance to oxidative stress phenotype" ;
rdfs:comment "A resistance to stress phenotype related to the resistance or sensitivity that microbes in a population show when exposed to oxidative stress, such as exposure to reactive oxygen species or reactive nitrogen species." ;
rdfs:subClassOf obo:OMP_0007568 .
obo:OMP_0000206 a rdfs:Class ;
rdfs:label "altered hemolysis test result" ;
rdfs:comment "A hemolysis test phenotype where the ability to cause hemolysis is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0000099 , obo:OMP_0007131 .
obo:OMP_0000021 a rdfs:Class ;
rdfs:label "absence of myxospore formation" ;
rdfs:comment "A myxospore formation phenotype where an organism does not possess the ability to form myxospores." ;
rdfs:subClassOf obo:OMP_0000096 , obo:OMP_0007236 .
obo:OMP_0007574 a rdfs:Class ;
rdfs:label "resistance to alkaline pH stress phenotype" ;
rdfs:comment "A resistance to stress phenotype related to the resistance or sensitivity that microbes in a population show when exposed to environmental alkaline pH (typically, pH >7.5)." ;
rdfs:subClassOf obo:OMP_0007568 .
obo:PATO_0002014 a rdfs:Class ;
rdfs:label "structure, cavities" ;
rdfs:comment "A structural quality that inheres in a bearer by virtue of the bearer's containing hollow areas." ;
rdfs:subClassOf obo:PATO_0000141 .
obo:OMP_0007465 a rdfs:Class ;
rdfs:label "altered flocculation" ;
rdfs:comment "A flocculation phenotype where the frequency, rate, timing, or extent of flocculation is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0000178 , obo:OMP_0007469 .
obo:OMP_0007555 a rdfs:Class ;
rdfs:label "multicellular microorganism morphology phenotype" ;
rdfs:comment "A microbial phenotype relating to the size, shape, or appearance of a multicellular microorganism." ;
rdfs:subClassOf obo:OMP_0000000 .
obo:OMP_0007172 a rdfs:Class ;
rdfs:label "not resistant to host defense peptide" ;
rdfs:comment "A host defense peptide resistance phenotype where a microbe is sensitive to one or more host defense peptides." ;
rdfs:subClassOf obo:OMP_0007881 .
obo:OMP_0007386 a rdfs:Class ;
rdfs:label "abolished resistance to benzamides" ;
rdfs:comment "A decreased resistance to benzamides resistance phenotype where the resistance of an organism, cell, or cells to a benzamide is abolished." ;
rdfs:subClassOf obo:OMP_0007385 .
obo:OMP_0007725 a rdfs:Class ;
rdfs:label "nonviable after spore germination" ;
rdfs:comment "A vegetative cell viability phenotype in which a microbial spore germinates but fails to produce dividing cells that can survive and go on to grow and reproduce under the conditions specified." ;
rdfs:subClassOf obo:OMP_0007780 .
obo:OMP_0006121 a rdfs:Class ;
rdfs:label "abolished induced expression of the SOS response" ;
rdfs:comment "A decreased induced expression of the SOS response phenotype where induced expression of one or more genes in the SOS response is abolished." ;
rdfs:subClassOf obo:OMP_0005022 , obo:OMP_0005025 .
obo:OMP_0000329 a rdfs:Class ;
rdfs:label "presence of cell perimeter length variability" ;
rdfs:subClassOf obo:OMP_0007921 .
obo:OMP_0005180 a rdfs:Class ;
rdfs:label "cytoskeleton morphology phenotype" ;
rdfs:comment "A physical cellular phenotype relating to the size, shape, or structure of the cytoskeleton of a microbial cell." ;
rdfs:subClassOf obo:OMP_0007754 .
obo:OMP_0006031 a rdfs:Class ;
rdfs:label "altered resistance to macrolide" ;
rdfs:comment "A macrolide resistance phenotype where resistance to a macrolide compound is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0000321 , obo:OMP_0007134 .
obo:OMP_0006127 a rdfs:Class ;
rdfs:label "abolished negative DNA supercoiling" ;
rdfs:comment "A decrease negative DNA supercoiling phenotype where the ability to form negative supercoils in DNA is abolished." ;
rdfs:subClassOf obo:OMP_0001002 , obo:OMP_0006129 .
obo:OMP_0005191 a rdfs:Class ;
rdfs:label "absence of anaerobic population growth" ;
rdfs:comment "An anaerobic growth range phenotype where a microbial population cannot grow in the absence of oxygen." ;
rdfs:subClassOf obo:OMP_0005189 .
obo:OMP_0000244 a rdfs:Class ;
rdfs:label "papillated colony" ;
rdfs:comment "A colony form phenotype characterized by growth of small, round or cone-shaped protuberances." ;
rdfs:subClassOf obo:OMP_0000103 .
obo:OMP_0007688 a rdfs:Class ;
rdfs:label "decreased cell growth" ;
rdfs:comment "An altered cell growth phenotype where the rate, timing, or extent of cell growth is decreased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007687 .
obo:OMP_0007550 a rdfs:Class ;
rdfs:label "altered population growth - duplicate term" ;
rdfs:comment "DO NOT USE. This is a duplicate of OMP:0007157, which is the correct term to use for annotations." .
obo:OMP_0007983 a rdfs:Class ;
rdfs:label "altered cell area" ;
rdfs:subClassOf obo:OMP_0000319 , obo:OMP_0007083 .
obo:OMP_0007765 a rdfs:Class ;
rdfs:label "altered actin cortical patch localization" ;
rdfs:comment "A cellular process phenotype observed in the vegetative growth phase of the life cycle in which actin cortical patch localization is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007749 .
obo:OMP_0007518 a rdfs:Class ;
rdfs:label "absence of population growth in high osmolarity" ;
rdfs:comment "A population growth phenotype where a microbial population doesn't grow in conditions of high osmolarity." ;
rdfs:subClassOf obo:OMP_0007516 .
obo:OMP_0000298 a rdfs:Class ;
rdfs:label "increased fraction of cells with one nucleoid" ;
rdfs:subClassOf obo:OMP_0000293 .
obo:OMP_0005340 a rdfs:Class ;
rdfs:label "decreased cell lysis" ;
rdfs:comment "An altered cell lysis phenotype where the frequency, rate, timing, or extent of cytolysis is decreased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0005339 .
obo:OMP_0000317 a rdfs:Class ;
rdfs:label "cell diameter phenotype" ;
rdfs:subClassOf obo:OMP_0000074 .
obo:OMP_0005286 a rdfs:Class ;
rdfs:label "decreased colonization of host tissue" ;
rdfs:comment "An altered colonization of host tissue phenotype where the frequency, rate, timing, or extent of colonization of a host tissue is decreased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0005284 .
obo:OMP_0007273 a rdfs:Class ;
rdfs:label "bacteriocin tolerant" ;
rdfs:comment "An increased resistance to bacteriocin phenotype where cells still bind the bacteriocin but are resistant to its effects." ;
rdfs:subClassOf obo:OMP_0006049 .
obo:OMP_0007439 a rdfs:Class ;
rdfs:label "presence of sexual reproduction" ;
rdfs:comment "A sexual reproduction phenotype where an organism is able to reproduce sexually." ;
rdfs:subClassOf obo:OMP_0007406 .
obo:OMP_0007681 a rdfs:Class ;
rdfs:label "abolished transporter activity" ;
rdfs:comment "A decreased transporter activity phenotype where a specified transporter activity is abolished." ;
rdfs:subClassOf obo:OMP_0007677 , obo:OMP_0007679 .
obo:PATO_0000004 a rdfs:Class ;
rdfs:label "mobility" ;
rdfs:comment "A quality of inhering in a bearer by virtue of the bearer's disposition to move freely." ;
rdfs:subClassOf obo:PATO_0001018 .
obo:PATO_0001499 a rdfs:Class ;
rdfs:label "spherical" ;
rdfs:comment "A spheroid quality inhering in a bearer by virtue of the bearer's resembling a ball (a sphere whose equatorial diameter is equal to the polar diameter)." ;
rdfs:subClassOf obo:PATO_0001865 .
a rdf:Property ;
rdfs:label "has_cross_section" ;
rdfs:comment "s3 has_cross_section s3 if and only if : there exists some 2d plane that intersects the bearer of s3, and the impression of s3 upon that plane has shape quality s2." ;
rdfs:range .
obo:OMP_0005271 a rdfs:Class ;
rdfs:label "altered endomembrane system morphology" ;
rdfs:comment "An endomembrane system morphology phenotype where the morphology of the endomembrane system is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0005270 .
obo:OMP_0007866 a rdfs:Class ;
rdfs:label "decreased resistance to bicyclomycin" .
obo:GO_0044710 a rdfs:Class ;
rdfs:label "single-organism metabolic process" ;
rdfs:comment "A metabolic process - chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances - which involves a single organism." ;
rdfs:subClassOf obo:GO_0008152 , obo:GO_0044699 .
obo:OMP_0007707 a rdfs:Class ;
rdfs:label "increased vegetative cell length" ;
rdfs:comment "An increased cell length phenotype where cells in the vegetative growth phase of the life cycle are longer than a designated control." ;
rdfs:subClassOf obo:OMP_0000280 , obo:OMP_0007713 .
obo:OMP_0000067 a rdfs:Class ;
rdfs:label "presence of motility by swarming" ;
rdfs:comment "A presence of motility phenotype where a population of microbes exhibit coordinated translocation across solid or semi-solid surfaces." ;
rdfs:subClassOf obo:OMP_0000005 .
obo:OMP_0000290 a rdfs:Class ;
rdfs:label "genetic material phenotype" ;
rdfs:comment "A microbial phenotype dealing with the various aspects of the nucleic acid carrier of a microbe's primary genetic information." ;
rdfs:subClassOf obo:OMP_0000000 .
obo:OMP_0006085 a rdfs:Class ;
rdfs:label "oxidase positive" ;
rdfs:comment "An oxidase test phenotype where an organism exhibits oxidase activity." ;
rdfs:subClassOf obo:OMP_0000220 .
obo:OMP_0006180 a rdfs:Class ;
rdfs:label "absence of antimicrobial peptide production" ;
rdfs:comment "An antimicrobial peptide production phenotype where an organism does not have the ability to produce an antimicrobial peptide." ;
rdfs:subClassOf obo:OMP_0006105 .
obo:OMP_0000045 a rdfs:Class ;
rdfs:label "increased motility" ;
rdfs:comment "An altered motility phenotype where the frequency, rate, timing, or extent of motility of a microbe is increased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007001 .
obo:GO_0008150 a rdfs:Class ;
rdfs:label "biological_process" ;
rdfs:comment "Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end." .
obo:OMP_0000273 a rdfs:Class ;
rdfs:label "altered cell perimeter length" ;
rdfs:subClassOf obo:OMP_0000324 , obo:OMP_0007083 .
obo:OMP_0006105 a rdfs:Class ;
rdfs:label "antimicrobial peptide production phenotype" ;
rdfs:comment "A secondary metabolite production phenotype where the metabolite produced is an antimicrobial peptide, which can have protective properties against bacteria, fungi, viruses, or protozoa." ;
rdfs:subClassOf obo:OMP_0006000 .
obo:OMP_0005316 a rdfs:Class ;
rdfs:label "colonization of tissue in an immunocompromised rabbit phenotype" ;
rdfs:comment "A colonization of host tissue phenotype related to the ability of a microbe to colonize tissue in an immunocompromised rabbit." ;
rdfs:subClassOf obo:OMP_0005288 .
obo:OMP_0005366 a rdfs:Class ;
rdfs:label "abolished osmotaxis" ;
rdfs:comment "A decreased osmotaxis phenotype where osmotaxis by a motile microbe is abolished." ;
rdfs:subClassOf obo:OMP_0005363 , obo:OMP_0005372 .
obo:OMP_0005208 a rdfs:Class ;
rdfs:label "presence of adhesion to host" ;
rdfs:comment "An adhesion to host phenotype where a microbe has the ability to attach to a host." ;
rdfs:subClassOf obo:OMP_0005206 .
obo:OMP_0007157 a rdfs:Class ;
rdfs:label "altered population growth" ;
rdfs:comment "A population growth phenotype where the rate and/or extent of growth of a microbial population is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007167 , obo:OMP_0007351 , obo:OMP_0007931 .
obo:OMP_0007149 a rdfs:Class ;
rdfs:label "septation phenotype" ;
rdfs:comment "A cytokinesis phenotype related to the process of forming a septum that separates daughter cells." ;
rdfs:subClassOf obo:OMP_0007148 .
obo:OMP_0007798 a rdfs:Class ;
rdfs:label "altered vegetative cell population growth" ;
rdfs:subClassOf obo:OMP_0007795 , obo:OMP_0007809 .
obo:OMP_0008047 a rdfs:Class ;
rdfs:label "plaque appearance phenotype" ;
rdfs:comment "A bacteriophage plaque morphology phenotype that describe the appearance of viral plaques." .
obo:OMP_0007747 a rdfs:Class ;
rdfs:label "altered actin cytoskeleton morphology during vegetative growth" ;
rdfs:comment "An actin cytoskeleton morphology phenotype where the morphology of the actin cytoskeleton in a cell that is in the vegetative phase of the growth cycle is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0005185 .
obo:OMP_0000172 a rdfs:Class ;
rdfs:label "response to chemical stimulus phenotype" ;
rdfs:comment "A stress response phenotype dealing with the response to exposure to chemical stimuli." ;
rdfs:subClassOf obo:OMP_0000173 .
obo:OMP_0007470 a rdfs:Class ;
rdfs:label "altered population morphology" ;
rdfs:comment "A population morphology phenotype where the visible appearance of a microbial population is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007315 , obo:OMP_0007931 .
obo:GO_0016458 a rdfs:Class ;
rdfs:label "gene silencing" ;
rdfs:comment "Any transcriptional or post-transcriptional process carried out at the cellular level that results in long-term gene inactivation." ;
rdfs:subClassOf obo:GO_0010629 , obo:GO_0044763 .
obo:OMP_0000010 a rdfs:Class ;
rdfs:label "presence of heterocysts" ;
rdfs:comment "A heterocyst formation phenotype where a cell possesses the ability to differentiate into a heterocyst." ;
rdfs:subClassOf obo:OMP_0000092 .
obo:OMP_0007935 a rdfs:Class ;
rdfs:label "altered resistance to nutrient limitation" ;
rdfs:comment "A resistance to stress phenotype where the resistance of a microbial population to nutrient limitation is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007572 , obo:OMP_0007932 .
obo:OMP_0007009 a rdfs:Class ;
rdfs:label "increased population growth at acidic pH" ;
rdfs:comment "An altered population growth phenotype where rate and/or extent of growth of a microbial population at acidic pH (< pH 7) is increased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007138 .
obo:OMP_0007855 a rdfs:Class ;
rdfs:label "fosmidomycin antimicrobial agent resistance phenotype" ;
rdfs:comment "An antimicrobial agent resistance phenotype relating to the resistance or sensitivity of a microbe to fosmidomycin." ;
rdfs:subClassOf obo:OMP_0000274 .
obo:OMP_0007252 a rdfs:Class ;
rdfs:label "colonization of a host phenotype" ;
rdfs:comment "A microbe-host interaction phenotype that relates to the ability of a microbe to colonize a host organism." ;
rdfs:subClassOf obo:OMP_0000197 .
obo:OMP_0007230 a rdfs:Class ;
rdfs:label "endospore exosporium phenotype" ;
rdfs:comment "An endospore external encapsulating structure phenotype related to the exposporium, which when present is the outermost layer of a mature spore. The exosporium of bacterial endospores is typically loosely attached and located outside of the endospore coat. It is generally composed of protein, carbohydrate, and perhaps lipid." ;
rdfs:subClassOf obo:OMP_0007229 .
obo:OMP_0007787 a rdfs:Class ;
rdfs:label "presence of cell separation after cell division during vegetative growth" ;
rdfs:subClassOf obo:OMP_0007785 .
obo:OMP_0007276 a rdfs:Class ;
rdfs:label "increased threshold for positive chemotaxis" ;
rdfs:comment "A decreased positive chemotaxis phenotype where the threshold concentration for responding to an attractant is increased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0000503 .
obo:OMP_0000262 a rdfs:Class ;
rdfs:label "increased nucleoid area" ;
rdfs:subClassOf obo:OMP_0000260 .
obo:OMP_0000460 a rdfs:Class ;
rdfs:label "decreased caffeine resistance" ;
rdfs:comment "An altered caffeine resistance phenotype where resistance is decreased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0005001 .
obo:OMP_0007758 a rdfs:Class ;
rdfs:label "actin cytoskeleton phenotype" ;
rdfs:comment "A subcellular component phenotype relating to the amount, distribution, composition, or morphology of the actin cytoskeleton of a microbial cell." ;
rdfs:subClassOf obo:OMP_0007754 .
obo:OMP_0005215 a rdfs:Class ;
rdfs:label "altered adhesion" ;
rdfs:comment "An adhesion phenotype where the frequency, rate, timing, or extent of attachment of a microbe to a surface is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0005205 , obo:OMP_0007351 .
obo:OMP_0000127 a rdfs:Class ;
rdfs:label "sheathed" ;
rdfs:comment "A cell arrangement phenotype where chains of cells are enclosed in a hyaline envelope or sheath." ;
rdfs:subClassOf obo:OMP_0000003 .
obo:OMP_0007002 a rdfs:Class ;
rdfs:label "decreased positive supercoiling" ;
rdfs:comment "An altered DNA supercoiling phenotype where positive supercoiling is decreased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0006126 .
obo:PATO_0000574 a rdfs:Class ;
rdfs:label "decreased length" ;
rdfs:comment "A length quality which is relatively small." ;
rdfs:subClassOf obo:PATO_0000122 , obo:PATO_0000587 .
obo:OMP_0007718 a rdfs:Class ;
rdfs:label "abolished viability of vegetative microbial cell" ;
rdfs:comment "An altered microbial cell viability phenotype where the viability of cells in the vegetative growth phase of the life cycle is abolished." ;
rdfs:subClassOf obo:OMP_0007717 .
obo:OMP_0000015 a rdfs:Class ;
rdfs:label "decreased heterocyst formation" ;
rdfs:comment "A heterocyst formation phenotype where heterocyst formation is decreased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0006007 .
obo:OMP_0007606 a rdfs:Class ;
rdfs:label "increased frequency of DNA breaks" ;
rdfs:comment "An altered frequency of DNA breaks phenotype where the frequency of breaks in chromosomal DNA is increased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007605 .
obo:OMP_0007646 a rdfs:Class ;
rdfs:label "free-living lifestyle phenotype" ;
rdfs:comment "A microbial lifestyle phenotype that is the summative outcome of multiple phenotypes that, acting together, typically provide an organism some advantage while competing for niche space in a fluid medium, unattached to other organisms or non-living, solid material entities." ;
rdfs:subClassOf obo:OMP_0007645 .
obo:OMP_0006054 a rdfs:Class ;
rdfs:label "not resistant to azole" ;
rdfs:comment "An azole compound resistance phenotype where an organism or cell is sensitive to one or more azole compounds." ;
rdfs:subClassOf obo:OMP_0006028 .
obo:PATO_0001406 a rdfs:Class ;
rdfs:label "binucleate" ;
rdfs:comment "A nucleate quality inhering in a bearer by virtue of the bearer's having two nuclei." ;
rdfs:subClassOf obo:PATO_0001908 .
obo:GO_0006807 a rdfs:Class ;
rdfs:label "nitrogen compound metabolic process" ;
rdfs:comment "The chemical reactions and pathways involving organic or inorganic compounds that contain nitrogen, including (but not limited to) nitrogen fixation, nitrification, denitrification, assimilatory/dissimilatory nitrate reduction and the interconversion of nitrogenous organic matter and ammonium." ;
rdfs:subClassOf obo:GO_0008152 .
obo:OMP_0005346 a rdfs:Class ;
rdfs:label "abolished resistance to organic aromatic compounds" ;
rdfs:comment "A decreased resistance to organic aromatic compounds phenotype where resistance to one or more organic aromatic compounds is abolished." ;
rdfs:subClassOf obo:OMP_0005345 .
obo:OMP_0007472 a rdfs:Class ;
rdfs:label "decreased ascospore formation" ;
rdfs:comment "An altered ascospore formation phenotype where the frequency, rate, timing, or extent of formation of ascospores is decreased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007408 , obo:OMP_0007437 .
obo:OMP_0005080 a rdfs:Class ;
rdfs:label "response to dessication stress phenotype" ;
rdfs:comment "A stress response phenotype dealing with the removal or immobilisation of water." ;
rdfs:subClassOf obo:OMP_0000173 .
obo:PATO_0002009 a rdfs:Class ;
rdfs:label "branchiness" ;
rdfs:comment "A shape quality inhering in a bearer by virtue of the degree to which there are subdivisions or offshoots in a bearer entity." ;
rdfs:subClassOf obo:PATO_0000052 .
obo:OMP_0007375 a rdfs:Class ;
rdfs:label "altered resistance to an alkylating agent" ;
rdfs:comment "An alkylating agent resistance phenotype where growth and reproduction of a microbe in the presence of an alkylating agent is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007248 , obo:OMP_0007372 .
obo:OMP_0005036 a rdfs:Class ;
rdfs:label "slow-stop DNA replication" ;
rdfs:comment "A conditional DNA replication phenotype where incorporation of dNTPs into DNA does not stop at the same rate as inactivation or depletion of a required gene product upon shift to a restrictive condition. Incorporation of dNTPs stops only after completion of any rounds of replication that had initiated prior to the shift." ;
rdfs:subClassOf obo:OMP_0007147 .
obo:OMP_0000346 a rdfs:Class ;
rdfs:label "nucleoid constriction during cell division phenotype" ;
rdfs:subClassOf obo:OMP_0000150 .
obo:OMP_0007111 a rdfs:Class ;
rdfs:label "chemoorganotrophic" ;
rdfs:comment "A chemotrophic phenotype where energy is derived from the oxidation of organic molecules." ;
rdfs:subClassOf obo:OMP_0007109 .
obo:OMP_0007013 a rdfs:Class ;
rdfs:label "inorganic nitrogen source utilization phenotype" ;
rdfs:comment "A nitrogen source utilization phenotype where an inorganic nitrogen-containing compound is the source of nitrogen." ;
rdfs:subClassOf obo:OMP_0006026 .
obo:OMP_0007079 a rdfs:Class ;
rdfs:label "altered growth factor requirement" ;
rdfs:comment "A growth factor requirement phenotype where an organism's requirement for a growth factor for growth and reproduction is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007044 , obo:OMP_0007104 .
obo:OMP_0000378 a rdfs:Class ;
rdfs:label "altered acid tolerance response" ;
rdfs:subClassOf obo:OMP_0000376 , obo:OMP_0007158 .
obo:OMP_0007533 a rdfs:Class ;
rdfs:label "urea derivative resistance phenotype" ;
rdfs:comment "An antimicrobial agent resistance phenotype relating to resistance or sensitivity to compounds that are structural derivatives of urea." .
obo:OMP_0007503 a rdfs:Class ;
rdfs:label "altered capsule size" ;
rdfs:comment "An altered capsule morphology phenotype where the size of the capsule is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007502 .
obo:OMP_0000363 a rdfs:Class ;
rdfs:label "cell perimeter length variability phenotype" ;
rdfs:subClassOf obo:OMP_0007917 .
obo:GO_0030435 a rdfs:Class ;
rdfs:label "sporulation resulting in formation of a cellular spore" ;
rdfs:comment "The process in which a relatively unspecialized cell acquires the specialized features of a cellular spore, a cell form that can be used for dissemination, for survival of adverse conditions because of its heat and dessication resistance, and/or for reproduction." ;
rdfs:subClassOf obo:GO_0030154 , obo:GO_0043934 , obo:GO_0048646 .
obo:OMP_0000164 a rdfs:Class ;
rdfs:label "umbonate colony elevation" ;
rdfs:comment "A colony elevation phenotype characterized by raised growth in the center." ;
rdfs:subClassOf obo:OMP_0000104 .
obo:OMP_0005192 a rdfs:Class ;
rdfs:label "altered anaerobic population growth" ;
rdfs:comment "A population growth range phenotype where the ability of a microbial population to grow in the absence of oxygen is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0005189 .
obo:OMP_0007165 a rdfs:Class ;
rdfs:label "altered septation" ;
rdfs:comment "A septation phenotype where the process of forming a septum between daughter cells is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007149 .
obo:OMP_0000330 a rdfs:Class ;
rdfs:label "cell surface area-to-volume ratio phenotype" ;
rdfs:subClassOf obo:OMP_0000074 .
obo:OMP_0000183 a rdfs:Class ;
rdfs:label "anaerobic respiration with sulfate as the terminal acceptor" ;
rdfs:comment "A presence of anaerobic respiration phenotype where sulfate (SO4) is used as the terminal electron acceptor." ;
rdfs:subClassOf obo:OMP_0007181 .
obo:OMP_0005257 a rdfs:Class ;
rdfs:label "altered microaerophilic population growth" ;
rdfs:comment "A population growth range phenotype where the ability of a microbial population to grow in a microaerophilic environment is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0005254 .
obo:OMP_0000115 a rdfs:Class ;
rdfs:label "transparent colony" ;
rdfs:comment "A colony opacity phenotype characterized by a clear appearance." ;
rdfs:subClassOf obo:OMP_0000102 .
obo:PATO_0000591 a rdfs:Class ;
rdfs:label "increased thickness" ;
rdfs:comment "A thickness which is relatively high." ;
rdfs:subClassOf obo:PATO_0000586 , obo:PATO_0000915 .
obo:OMP_0000138 a rdfs:Class ;
rdfs:label "altered cell circularity variability" ;
rdfs:comment "Cell circularity is defined as (2*pi*cell area/(cell perimeter)^2)." ;
rdfs:subClassOf obo:OMP_0000044 .
obo:PATO_0000422 a rdfs:Class ;
rdfs:label "auxotrophic" ;
rdfs:comment "A nutritional quality inhering in a bearer by virtue of the bearer's inability to synthesize a particular organic compound required for its growth." ;
rdfs:subClassOf obo:PATO_0000056 .
obo:PATO_0001995 a rdfs:Class ;
rdfs:label "organismal quality" ;
rdfs:comment "A quality that inheres in an entire organism or part of an organism." ;
rdfs:subClassOf obo:PATO_0001241 .
obo:OMP_0007639 a rdfs:Class ;
rdfs:label "decreased cell wall protein level" ;
rdfs:comment "An altered cell wall protein level where the amount of cell wall protein measured in a cell is decreased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007630 .
obo:OMP_0007021 a rdfs:Class ;
rdfs:label "decreased amino acid requirement" ;
rdfs:comment "An altered amino acid requirement phenotype where an organism's requirement for an amino acid in the growth medium is decreased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007075 , obo:OMP_0007354 .
obo:OMP_0000136 a rdfs:Class ;
rdfs:label "in vitro nucleoid shape" ;
rdfs:comment "A nucleoid phenotype dealing with shape of the nucleoid region." ;
rdfs:subClassOf obo:OMP_0000150 .
obo:OMP_0007234 a rdfs:Class ;
rdfs:label "absence of budding" ;
rdfs:comment "A budding phenotype where an organism lacks to the ability to multiply by the process of budding." ;
rdfs:subClassOf obo:OMP_0000089 .
obo:PATO_0001444 a rdfs:Class ;
rdfs:label "broken" ;
rdfs:comment "A broken quality inhering in a bearer by virtue of the bearer's being broken open." ;
rdfs:subClassOf obo:PATO_0001442 .
obo:OMP_0007320 a rdfs:Class ;
rdfs:label "absence of mucoid colonies" ;
rdfs:comment "A mucoid colony phenotype where the organism forms nonmucoid colonies." ;
rdfs:subClassOf obo:OMP_0007319 .
obo:OMP_0005013 a rdfs:Class ;
rdfs:label "solute and water activity effects on population growth phenotype" ;
rdfs:comment "A population growth range phenotype related to how growth of a microbial population is affected by the concentration of solutes (water activity) in the environment." ;
rdfs:subClassOf obo:OMP_0007192 .
obo:OMP_0000201 a rdfs:Class ;
rdfs:label "nanotube mediated communication" ;
rdfs:comment "A microbial communication phenotype communication is facilitated between one or more microbes by a connected nanotube." ;
rdfs:subClassOf obo:OMP_0000101 .
obo:OMP_0007060 a rdfs:Class ;
rdfs:label "presence of organic sulfur utilization" ;
rdfs:comment "A sulfur source utilization phenotype where an organism uses an organic S-containing compound as the source of sulfur." ;
rdfs:subClassOf obo:OMP_0007042 .
obo:PATO_0000911 a rdfs:Class ;
rdfs:label "decreased rate" ;
rdfs:comment "A rate which is relatively low." ;
rdfs:subClassOf obo:PATO_0000161 , obo:PATO_0002302 .
obo:OMP_0007628 a rdfs:Class ;
rdfs:label "decreased cell wall chitin level" ;
rdfs:comment "An altered cell wall chitin level phenotype where the amount of chitin measured in the cell wall is decreased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007626 .
obo:OMP_0007187 a rdfs:Class ;
rdfs:label "quality (Interim)" ;
rdfs:comment "A dependent entity that inheres in a bearer by virtue of how the bearer is related to other entities." .
obo:OMP_0008020 a rdfs:Class ;
rdfs:label "endospore formation stopped at stage III" ;
rdfs:comment "An interrupted endospore formation phenotype where sporulation is stopped after engulfment but before production of the endospore cortex and coat." ;
rdfs:subClassOf obo:OMP_0008018 .
obo:OMP_0007679 a rdfs:Class ;
rdfs:label "decreased transporter activity" ;
rdfs:comment "An altered transporter activity phenotype where the observed rate of a specified transporter activity is decreased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007678 .
obo:OMP_0005246 a rdfs:Class ;
rdfs:label "decreased filamentous growth" ;
rdfs:comment "An altered filamentous growth phenotype where the frequency, rate, or extent of filamentous is decreased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0005244 .
obo:OMP_0005141 a rdfs:Class ;
rdfs:label "altered resistance to killing by host" ;
rdfs:comment "A resistance to killing by host phenotype where the resistance or sensitivity of a microbe to killing by a host cells is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0005111 , obo:OMP_0007403 .
obo:OMP_0000089 a rdfs:Class ;
rdfs:label "budding phenotype" ;
rdfs:comment "An asexual reproduction phenotype related to the process of budding, where a new individual forms from an outgrowth (bud) on the body of the parental organism." ;
rdfs:subClassOf obo:OMP_0007066 .
obo:OMP_0005130 a rdfs:Class ;
rdfs:label "altered enzymatic activity" ;
rdfs:comment "An enzymatic activity phenotype where a specified enzymatic activity is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0000221 , obo:OMP_0007085 .
obo:OMP_0007668 a rdfs:Class ;
rdfs:label "presence of transport" ;
rdfs:comment "A transport phenotype where a microbe is able to transport a specific substrate(s) into, out of, or within a cell or between cells." ;
rdfs:subClassOf obo:OMP_0005260 .
obo:OMP_0007782 a rdfs:Class ;
rdfs:label "cut cell" ;
rdfs:comment "A nonviable cell phenotype observed in the vegetative growth phase of the life cycle in which a cell undergoes septation in the absence of nuclear division, such that the septum physically divides the nucleus into two parts and produces nonviable daughter cells." ;
rdfs:subClassOf obo:OMP_0007781 .
obo:OMP_0007949 a rdfs:Class ;
rdfs:label "" ;
rdfs:subClassOf obo:OMP_0007705 .
obo:PATO_0000411 a rdfs:Class ;
rdfs:label "circular" ;
rdfs:comment "A shape quality inhering in a bearer by virtue of the bearer's being such that every part of the surface or the circumference is equidistant from the center." ;
rdfs:subClassOf obo:PATO_0000947 .
obo:OMP_0007812 a rdfs:Class ;
rdfs:label "presence of cellular pigment accumulation" ;
rdfs:comment "A cellular process phenotype where the process of accumulating pigment occurs in a cell or cells of a microorganism." ;
rdfs:subClassOf obo:OMP_0007811 .
obo:PATO_0000330 a rdfs:Class ;
rdfs:label "irregular spatial pattern" ;
rdfs:comment "A spatial pattern inhering in a bearer by virtue of the bearer's magnitude of or the relationships between its repeated parts lack consistency." ;
rdfs:subClassOf obo:PATO_0000060 .
obo:OMP_0007989 a rdfs:Class ;
rdfs:label "altered cell volume" ;
rdfs:subClassOf obo:OMP_0000328 , obo:OMP_0007083 .
obo:OMP_0007929 a rdfs:Class ;
rdfs:label "decreased microaerophilic population growth" ;
rdfs:comment "A population growth phenotype where growth of a microbial population in a microaerophilic environment is decreased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0005257 .
obo:OMP_0005051 a rdfs:Class ;
rdfs:label "presence of homologous recombination" ;
rdfs:comment "A homologous recombination phenotype a cell or cells have the ability to perform homologous recombination." ;
rdfs:subClassOf obo:OMP_0005042 .
obo:OMP_0007941 a rdfs:Class ;
rdfs:label "altered viability after microbial spore germination" ;
rdfs:subClassOf obo:OMP_0007724 .
obo:GO_0044271 a rdfs:Class ;
rdfs:label "cellular nitrogen compound biosynthetic process" ;
rdfs:comment "The chemical reactions and pathways resulting in the formation of organic and inorganic nitrogenous compounds." ;
rdfs:subClassOf obo:GO_0034641 , obo:GO_0044249 .
obo:OMP_0005018 a rdfs:Class ;
rdfs:label "altered SOS response phenotype" ;
rdfs:comment "An SOS response phenotype where expression of one or more genes in the SOS response is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0005017 .
obo:OMP_0007176 a rdfs:Class ;
rdfs:label "absence of aerobic respiration" ;
rdfs:comment "An aerobic respiration phenotype where an organism, cell, or cells lack the ability to perform aerobic respiration." ;
rdfs:subClassOf obo:OMP_0000216 .
obo:PATO_0000122 a rdfs:Class ;
rdfs:label "length" ;
rdfs:comment "A 1-D extent quality which is equal to the distance between two points." ;
rdfs:subClassOf obo:PATO_0001708 .
obo:OMP_0005305 a rdfs:Class ;
rdfs:label "altered colonization of tissue in an immunocompromised mouse" ;
rdfs:comment "A colonization of tissue in an immunocompromised mouse phenotype where the frequency, rate, timing, or extent of colonization is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0005302 .
obo:OMP_0006020 a rdfs:Class ;
rdfs:label "altered bacteriocin resistance" ;
rdfs:comment "A bacteriocin resistance phenotype where resistance to a bacteriocin is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0006027 , obo:OMP_0007134 .
obo:OMP_0008060 a rdfs:Class ;
rdfs:label "turbid plaque appearance" ;
rdfs:comment "A bacteriophage plaque morphology phenotype where the viral plaque has a turbid appearance." ;
rdfs:subClassOf obo:OMP_0008058 .
obo:OMP_0007461 a rdfs:Class ;
rdfs:label "nonviable vegetative cell population" ;
rdfs:comment "A nonviable cell population phenotype where the cells in the population are in the vegetative growth phase of the life cycle." ;
rdfs:subClassOf obo:OMP_0007458 .
obo:OMP_0007399 a rdfs:Class ;
rdfs:label "abolished lethality" ;
rdfs:comment "A decreased lethality phenotype where the ability of an infectious microbe to cause death of the host is abolished." ;
rdfs:subClassOf obo:OMP_0007396 , obo:OMP_0007398 .
obo:OMP_0000161 a rdfs:Class ;
rdfs:label "raised colony elevation" ;
rdfs:comment "A colony elevation phenotype characterized by uniform growth above the medium." ;
rdfs:subClassOf obo:OMP_0000104 .
obo:OMP_0007125 a rdfs:Class ;
rdfs:label "abolished translation" ;
rdfs:comment "A decreased translation phenotype where translation of one or more mRNAs is abolished." ;
rdfs:subClassOf obo:OMP_0007124 .
obo:OMP_0006035 a rdfs:Class ;
rdfs:label "altered budding" ;
rdfs:comment "A budding phenotype where the rate, frequency, timing, or extent of the process of budding is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0000089 , obo:OMP_0007144 .
obo:OMP_0007844 a rdfs:Class ;
rdfs:label "curved germ tube morphology" ;
rdfs:comment "An altered germ tube morphology phenotype where the germ tube is curved along its long axis." ;
rdfs:subClassOf obo:OMP_0007739 .
obo:OMP_0000004 a rdfs:Class ;
rdfs:label "taxis phenotype" ;
rdfs:comment "A locomotion phenotype where the directed movement of a motile microbe is in response to an external stimulus." ;
rdfs:subClassOf obo:OMP_0000312 .
obo:OMP_0006004 a rdfs:Class ;
rdfs:label "increased budding" ;
rdfs:comment "An altered budding phenotype where the rate, frequency, timing, or extent of budding is increased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0006035 .
obo:OMP_0005007 a rdfs:Class ;
rdfs:label "psychrophile" ;
rdfs:comment "A population growth phenotype where growth of a microbial population can occur at 0 C and optimal growth occurs at temperatures of 15 C or lower." ;
rdfs:subClassOf obo:OMP_0005002 .
obo:OMP_0005275 a rdfs:Class ;
rdfs:label "altered organic heterocyclic compound resistance" ;
rdfs:comment "An organic heterocyclic compound resistance phenotype where the frequency, rate, timing, or extent of resistance to an organic heterocyclic compound is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0005274 , obo:OMP_0007134 .
obo:OMP_0000009 a rdfs:Class ;
rdfs:label "decreased cell surface area-to-volume ratio" ;
rdfs:subClassOf obo:OMP_0007999 .
obo:OMP_0007721 a rdfs:Class ;
rdfs:label "increased cell volume" ;
rdfs:subClassOf obo:OMP_0000041 .
obo:OMP_0007860 a rdfs:Class ;
rdfs:label "decreased resistance to fosfomycin" ;
rdfs:comment "An altered fosfomycin resistance phenotype where the ability of a microbe to grow and reproduce in the presence of fosfomycin is decreased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007858 .
obo:OMP_0006173 a rdfs:Class ;
rdfs:label "presence of multiple fission" ;
rdfs:comment "A multiple fission phenotype where an organism reproduces by the process of multiple fission." ;
rdfs:subClassOf obo:OMP_0007068 .
obo:OMP_0007140 a rdfs:Class ;
rdfs:label "schizogeny phenotype" ;
rdfs:comment "A multiple fission phenotype related to the process of schizogeny, where the nucleus of the parent cell divides multiple times before the cytoplasm separates and each nucleus is encased in its own membrane to form an individual cell." ;
rdfs:subClassOf obo:OMP_0007068 .
obo:OMP_0000032 a rdfs:Class ;
rdfs:label "decreased cell surface area-to-volume ratio variability" ;
rdfs:subClassOf obo:OMP_0000025 .
obo:OMP_0007686 a rdfs:Class ;
rdfs:label "absence of cell growth" ;
rdfs:comment "A cell growth phenotype where a cell does not irreversibly increase in size over time by accretion and biosynthetic production of matter similar to that already present." ;
rdfs:subClassOf obo:OMP_0007684 .
obo:PATO_0001798 a rdfs:Class ;
rdfs:label "kinked" ;
rdfs:comment "A shape quality inhering in a bearer by virtue of the bearer's having multiple angles in its length." ;
rdfs:subClassOf obo:PATO_0000617 .
obo:OMP_0000078 a rdfs:Class ;
rdfs:label "flagellum arrangement phenotype" ;
rdfs:comment "A flagellum phenotype where the trait in question is the location of the flagellum on an organism." ;
rdfs:subClassOf obo:OMP_0000027 .
obo:OMP_0000255 a rdfs:Class ;
rdfs:label "plating morphology phenotype" ;
rdfs:comment "A growth phenotype related to the morphology of colonies on solid medium." .
obo:OMP_0005350 a rdfs:Class ;
rdfs:label "presence of mating" ;
rdfs:comment "A mating phenotype where an organism uses the process of conjugation for sexual reproduction." ;
rdfs:subClassOf obo:OMP_0007412 .
obo:OMP_0006072 a rdfs:Class ;
rdfs:label "not resistant to lantibiotic" ;
rdfs:comment "A lantibiotic resistance phenotype where an organism or cell is sensitive to one or more lantibiotics." ;
rdfs:subClassOf obo:OMP_0006011 .
obo:OMP_0007353 a rdfs:Class ;
rdfs:label "altered spore germination" ;
rdfs:comment "A spore germination phenotype where germination of a spore or spores is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0000095 .
obo:OMP_0000104 a rdfs:Class ;
rdfs:label "colony elevation phenotype" ;
rdfs:comment "A colony morphology phenotype dealing with the height or vertical growth of the colony." ;
rdfs:subClassOf obo:OMP_0000100 .
obo:OMP_0005313 a rdfs:Class ;
rdfs:label "increased colonization of rabbit tissue" ;
rdfs:comment "An altered colonization of rabbit tissue phenotype where the frequency, rate, timing, or extent of colonization in rabbit tissue is increased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0005312 .
obo:PATO_0000460 a rdfs:Class ;
rdfs:label "abnormal" ;
rdfs:comment "A quality inhering in a bearer by virtue of the bearer's deviation from normal or average." ;
rdfs:subClassOf obo:PATO_0000069 .
obo:OMP_0000194 a rdfs:Class ;
rdfs:label "catalase positive" ;
rdfs:comment "A catalase test phenotype where an organism exhibits catalase activity." ;
rdfs:subClassOf obo:OMP_0000218 .
obo:OMP_0007136 a rdfs:Class ;
rdfs:label "resistant to alkaloid" ;
rdfs:comment "An alkaloid resistance phenotype where an organism or cell is resistant to one or more alkaloid compounds." ;
rdfs:subClassOf obo:OMP_0000455 .
obo:OMP_0008036 a rdfs:Class ;
rdfs:label "absence of natural competence" ;
rdfs:comment "A natural competence phenotype where a microbe lacks the ability to be transformed by taking up extracellular DNA from the environment." ;
rdfs:subClassOf obo:OMP_0008035 .
obo:OMP_0007396 a rdfs:Class ;
rdfs:label "absence of lethality" ;
rdfs:comment "A lethality phenotype where infection by a microbe does not cause death of the host." ;
rdfs:subClassOf obo:OMP_0007394 .
obo:OMP_0007514 a rdfs:Class ;
rdfs:label "decreased negative osmotaxis" ;
rdfs:comment "A decreased osmotaxis phenotype where negative osmotaxis by a motile microbe is decreased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0005372 .
obo:OMP_0007771 a rdfs:Class ;
rdfs:label "presence of population growth at alkaline pH" ;
rdfs:comment "A population growth phenotype where a microbial population is able to grow and reproduce at alkaline pH (pH>7)." ;
rdfs:subClassOf obo:OMP_0005008 .
obo:OMP_0005361 a rdfs:Class ;
rdfs:label "osmotaxis phenotype" ;
rdfs:comment "A taxis phenotype where the directed movement of a motile microbe is in response to an osmotic concentration gradient (formerly called osmolarity). Osmotaxis differs from chemotaxis in that during osmotaxis the microbe is responding to water activity not to the solute per se." ;
rdfs:subClassOf obo:OMP_0000004 .
obo:OMP_0007894 a rdfs:Class ;
rdfs:label "altered resistance to a surfactant" ;
rdfs:comment "A surfactant resistance phenotype where growth and reproduction of a microbe in the presence of a surfactant is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007248 , obo:OMP_0007891 .
obo:OMP_0006061 a rdfs:Class ;
rdfs:label "decreased resistance to tetracycline" ;
rdfs:comment "A tetracycline compound resistance phenotype where resistance to a tetracycline compound is decreased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0005029 .
obo:OMP_0000168 a rdfs:Class ;
rdfs:label "rhizoid colony" ;
rdfs:comment "A colony form phenotype characterized by the growth of thin, branching projections." ;
rdfs:subClassOf obo:OMP_0000103 .
obo:OMP_0007483 a rdfs:Class ;
rdfs:label "not resistant to quaternary ammonium salt antimicrobial agent" ;
rdfs:comment "A quaternary ammonium salts resistance phenotype where an organism or cell is sensitive to one or more quaternary ammonium salts." ;
rdfs:subClassOf obo:OMP_0007481 .
obo:OMP_0005108 a rdfs:Class ;
rdfs:label "increased cell diameter" ;
rdfs:comment """MERGED DEFINITION: An altered cell size phenotype where the diameter of a microbial cell with a circular cross-section is increased relative to a designated control.
TARGET DEFINITION: An altered cell size phenotype where the diameter of a coccus-shaped (spherical) microbial cell or cells is increased relative to a designated control.
--------------------
SOURCE DEFINITION: An altered cell size phenotype where the width of a non-coccus, i.e. rod- or spiral-shaped, microbial cell or cells is increased relative to a designated control.""" ;
rdfs:subClassOf obo:OMP_0000041 .
obo:PATO_0001591 a rdfs:Class ;
rdfs:label "curvature" ;
rdfs:comment "A surface shape quality inhering in a bearer by virtue of the bearer's exhibiting a degree of bending." ;
rdfs:subClassOf obo:PATO_0000052 .
obo:OMP_0005372 a rdfs:Class ;
rdfs:label "decreased osmotaxis" ;
rdfs:comment "An altered osmotaxis phenotype where osmotaxis by a motile microbe is decreased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0005371 .
obo:OMP_0007967 a rdfs:Class ;
rdfs:label "decreased cell population growth during nutrient limitation" ;
rdfs:comment "An altered cell population growth phenotype where the rate or extent of growth of a microbial population under conditions of limitation for an essential nutrient (i.e. conditions where an essential nutrient is present at low concentration) is decreased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007965 .
obo:OMP_0007169 a rdfs:Class ;
rdfs:label "antimicrobial peptide resistance phenotype" ;
rdfs:comment """An antimicrobial agent resistance phenotype related to resistance or sensitivity to peptides with antimicrobial activity. This class includes ribosomally synthesized peptides, nonribosomally synthesized peptides, and peptides with additional groups attached.
**This term was made obsolete because the grouping was too broad to be informative. It combined antimicrobial agents with widely different modes of action.""" .
obo:OMP_0007547 a rdfs:Class ;
rdfs:label "decreased haploid fruiting" ;
rdfs:comment "An altered haploid fruiting phenotype where the rate, frequency, timing, or extent of the process of haploid fruiting is decreased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007545 .
obo:OMP_0007086 a rdfs:Class ;
rdfs:label "altered sulfur source utilization phenotype" ;
rdfs:comment "A sulfur source utilization phenotype that is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007042 .
obo:OMP_0000374 a rdfs:Class ;
rdfs:label "decreased internalization by macrophage" ;
rdfs:subClassOf obo:OMP_0000372 .
obo:OMP_0007468 a rdfs:Class ;
rdfs:label "abolished flocculation" ;
rdfs:comment "A decreased flocculation phenotype where flocculation is abolished." ;
rdfs:subClassOf obo:OMP_0007464 , obo:OMP_0007467 .
obo:OMP_0007907 a rdfs:Class ;
rdfs:label "presence of biofilm formation" ;
rdfs:comment "A biofilm formation phenotype where a microbe is capable of forming a biofilm." ;
rdfs:subClassOf obo:OMP_0000176 .
obo:OMP_0005264 a rdfs:Class ;
rdfs:label "decreased endocytosis" ;
rdfs:comment "An altered endocytosis phenotype where the frequency, rate, timing, or extent of endocytosis is decreased relative to a designated control. A phenotype may affect endocytosis of all cargoes, or of specific cargo such as a particular protein." ;
rdfs:subClassOf obo:OMP_0005262 .
obo:OMP_0007218 a rdfs:Class ;
rdfs:label "resistant to rifamycin" ;
rdfs:comment "A rifamycin resistance phenotype where an organism or cell is resistant to one or more rifamycins." ;
rdfs:subClassOf obo:OMP_0007215 .
obo:OMP_0008043 a rdfs:Class ;
rdfs:label "plaque morphology phenotype" ;
rdfs:comment "A bacteriophage plaque morphology phenotype that describe the appearance, size of viral plaques." .
obo:OMP_0007825 a rdfs:Class ;
rdfs:label "decreased resistance to nitrofuran" ;
rdfs:comment "An altered nitrofuran resistance phenotype where resistance to a nitrofuran compound is decreased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007824 .
obo:OMP_0000126 a rdfs:Class ;
rdfs:label "trichome-forming" ;
rdfs:comment "A cell arrangement phenotype that consists of chains of cells in which the individual cells, which are usually wider than long, are closely appressed for the whole or the greater part of their width." ;
rdfs:subClassOf obo:OMP_0000003 .
obo:OMP_0007836 a rdfs:Class ;
rdfs:label "viable spore" ;
rdfs:comment "A cell viability phenotype in which a microbial spore is able to survive and go on to grow and reproduce under the specified conditions." ;
rdfs:subClassOf obo:OMP_0007392 , obo:OMP_0007835 .
obo:OMP_0007005 a rdfs:Class ;
rdfs:label "decreased negative chemotaxis" ;
rdfs:comment "A decreased chemotaxis phenotype where the frequency, rate, timing, or extent of negative chemotaxis by a motile microbe is decreased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0000503 .
obo:OMP_0007479 a rdfs:Class ;
rdfs:label "decreased resistance to phenols" ;
rdfs:comment "An altered resistance to phenols phenotype where the frequency, rate, timing, or extent of resistance to phenols is decreased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007477 .
obo:OMP_0007978 a rdfs:Class ;
rdfs:label "altered cell diameter variability" ;
rdfs:subClassOf obo:OMP_0007977 .
obo:OMP_0007536 a rdfs:Class ;
rdfs:label "altered resistance to a urea derivative" ;
rdfs:comment "A urea derivative resistance phenotype where resistance or sensitivity to a urea derivative is altered relative to a designated control." .
obo:OMP_0007975 a rdfs:Class ;
rdfs:label "altered cell length" ;
rdfs:subClassOf obo:OMP_0000322 , obo:OMP_0007083 .
obo:OMP_0000336 a rdfs:Class ;
rdfs:label "beta-lactam resistance phenotype" ;
rdfs:comment "An antimicrobial agent resistance phenotype related to resistance or sensitivity to compounds that contain a beta-lactam ring in their molecular structure." ;
rdfs:subClassOf obo:OMP_0000274 .
obo:OMP_0007256 a rdfs:Class ;
rdfs:label "increased colonization of a host" ;
rdfs:comment "An altered colonization of a host phenotype where the frequency, rate, timing, or extent of colonization is increased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007255 .
obo:OMP_0006143 a rdfs:Class ;
rdfs:label "abolished resistance to lantibiotic" ;
rdfs:comment "A decreased resistance to lantibiotics phenotype where resistance to lantibiotics is abolished." ;
rdfs:subClassOf obo:OMP_0006012 , obo:OMP_0006072 .
obo:OMP_0008019 a rdfs:Class ;
rdfs:label "endospore formation stopped at stage II" ;
rdfs:comment "An interrupted endospore formation phenotype where sporulation is stopped after formation of the septum, but before engulfment of the forespore by the mother cell." ;
rdfs:subClassOf obo:OMP_0008018 .
obo:PATO_0000070 a rdfs:Class ;
rdfs:label "amount" ;
rdfs:comment "The number of entities of this type that are part of the whole organism." ;
rdfs:subClassOf obo:PATO_0000068 .
a rdf:Property ;
rdfs:label "reciprocal_of" ;
rdfs:comment "q1 reciprocal_of q2 if and only if : q1 and q2 are relational qualities and a phenotype e q1 e2 mutually implies a phenotype e2 q2 e." ;
rdfs:range .
obo:OMP_0005253 a rdfs:Class ;
rdfs:label "presence of aerobic population growth" ;
rdfs:comment "A population growth range phenotype where a microbial population is able to grow in the presence of atmospheric levels of oxygen gas (approximately 21% O2)." ;
rdfs:subClassOf obo:OMP_0005250 .
obo:OMP_0007417 a rdfs:Class ;
rdfs:label "decreased conjugation" ;
rdfs:comment "An altered conjugation phenotype where the frequency, rate, timing, or extent of conjugation is decreased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007416 .
obo:OMP_0005079 a rdfs:Class ;
rdfs:label "decreased resistance to alkaline pH stress" ;
rdfs:comment "An altered resistance to alkaline pH stress phenotype where resistance of microbes in a population to alkaline pH is decreased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0005119 .
obo:OMP_0007153 a rdfs:Class ;
rdfs:label "altered persister cell phenotype" ;
rdfs:comment "A persister cell phenotype where the character or frequency of persister cells in a microbial population is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007152 , obo:OMP_0007157 .
obo:OMP_0007877 a rdfs:Class ;
rdfs:label "not resistant to an antimicrobial agent" ;
rdfs:comment "An antimicrobial agent resistance phenotype where growth and reproduction of a microbe is inhibited by the presence of the antimicrobial agent specified in the Annotation Extension field." ;
rdfs:subClassOf obo:OMP_0000274 .
obo:GO_0044763 a rdfs:Class ;
rdfs:label "single-organism cellular process" ;
rdfs:comment "Any process that is carried out at the cellular level, occurring within a single organism." ;
rdfs:subClassOf obo:GO_0009987 , obo:GO_0044699 .
obo:OMP_0007382 a rdfs:Class ;
rdfs:label "not resistant to benzamides" ;
rdfs:comment "A benzamides resistance phenotype where an organism, cell, or cells is not resistant to a benzamide." ;
rdfs:subClassOf obo:OMP_0007380 .
obo:OMP_0005219 a rdfs:Class ;
rdfs:label "cell fusion phenotype" ;
rdfs:comment "A cellular process phenotype involving the fusion of individual cells from different organisms." ;
rdfs:subClassOf obo:OMP_0007332 .
obo:OMP_0005302 a rdfs:Class ;
rdfs:label "colonization of tissue in an immunocompromised mouse phenotype" ;
rdfs:comment "A colonization of host tissue phenotype that related to the ability of a microbe to colonize tissue of an immunocompromised mouse." ;
rdfs:subClassOf obo:OMP_0005288 .
obo:PATO_0002345 a rdfs:Class ;
rdfs:label "lemon-shaped" ;
rdfs:comment "A convex 3-D shape quality inhering in a bearer by virtue of the bearer's having a quadric surface in three dimensions obtained by rotating less than half of a circular arc about an axis passing through the endpoints of the arc" ;
rdfs:subClassOf obo:PATO_0002007 .
obo:OMP_0005319 a rdfs:Class ;
rdfs:label "altered colonization of tissue in an immunocompromised rabbit" ;
rdfs:comment "A colonization of tissue in an immunocompromised rabbit phenotype where the frequency, rate, timing, or extent of colonization is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0005316 .
obo:OMP_0006096 a rdfs:Class ;
rdfs:label "abolished oxidase activity" ;
rdfs:comment "A decreased oxidase activity phenotype where oxidase activity is abolished." ;
rdfs:subClassOf obo:OMP_0006084 , obo:OMP_0006087 .
obo:OMP_0000197 a rdfs:Class ;
rdfs:label "microbe-host interaction phenotype" ;
rdfs:comment "A microbial phenotype related to the interactions between a microbe and its host(s)." ;
rdfs:subClassOf obo:OMP_0000000 .
obo:OMP_0007182 a rdfs:Class ;
rdfs:label "absence of anaerobic respiration" ;
rdfs:comment "An anaerobic respiration phenotype where an organism, cell, or cells lack the ability to perform anaerobic respiration." ;
rdfs:subClassOf obo:OMP_0007072 .
obo:OMP_0000272 a rdfs:Class ;
rdfs:label "cell morphology variability" ;
rdfs:subClassOf obo:OMP_0007698 .
obo:OMP_0005163 a rdfs:Class ;
rdfs:label "decreased phosphatase activity" ;
rdfs:comment "A phosphatase activity phenotype where phosphatase activity is decreased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0005162 .
obo:OMP_0007371 a rdfs:Class ;
rdfs:label "abolished resistance to an acridine" ;
rdfs:comment "A decreased resistance to an acridine phenotype where resistance abolished." ;
rdfs:subClassOf obo:OMP_0007367 , obo:OMP_0007370 .
obo:OMP_0000453 a rdfs:Class ;
rdfs:label "decreased heme utilization" ;
rdfs:comment "An altered heme utilization phenotype where the ability to utilize heme is decreased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007088 .
obo:OMP_0000175 a rdfs:Class ;
rdfs:label "nanotube phenotype" ;
rdfs:comment "A cell projection phenotype where the structure in question is a tube." ;
rdfs:subClassOf obo:OMP_0000083 .
obo:OMP_0007431 a rdfs:Class ;
rdfs:label "abolished asexual spore formation" ;
rdfs:comment "A decreased asexual spore formation phenotype where the process of forming asexual (mitotic) spores is abolished." ;
rdfs:subClassOf obo:OMP_0007430 .
obo:OMP_0005119 a rdfs:Class ;
rdfs:label "altered resistance to alkaline pH stress phenotype" ;
rdfs:comment "A resistance to alkaline pH stress phenotype where the resistance or sensitivity that microbes in a population show when exposed to alkaline pH stress is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007572 , obo:OMP_0007574 .
obo:OMP_0007691 a rdfs:Class ;
rdfs:label "vegetative cell growth phenotype" ;
rdfs:comment "A cell growth phenotype related to the growth of a cell in the vegetative growth phase of the life cycle. Cell growth is the process in which a cell irreversibly increases in size over time by accretion and biosynthetic production of matter similar to that already present." ;
rdfs:subClassOf obo:OMP_0007684 .
obo:OMP_0005008 a rdfs:Class ;
rdfs:label "pH effects on population growth phenotype" ;
rdfs:comment "A population growth phenotype relating to how the rate and/or extent of growth of a microbial population is affected by the pH of the environment." ;
rdfs:subClassOf obo:OMP_0007192 .
obo:OMP_0000347 a rdfs:Class ;
rdfs:label "altered nucleoid constriction during cell division" ;
rdfs:comment "This is a cell population average." ;
rdfs:subClassOf obo:OMP_0000281 , obo:OMP_0000346 .
obo:OMP_0000228 a rdfs:Class ;
rdfs:label "rough colony surface" ;
rdfs:comment "A colony surface phenotype where a colony or colonies have a dull, bumpy, granular, or matte surface." ;
rdfs:subClassOf obo:OMP_0000210 .
obo:OMP_0008002 a rdfs:Class ;
rdfs:label "absence of an endospore germ cell wall" ;
rdfs:comment "An endospore germ cell wall phenotype where an endospore lacks a germ cell wall." ;
rdfs:subClassOf obo:OMP_0008001 .
obo:OMP_0007046 a rdfs:Class ;
rdfs:label "organic phosphorus source utilization" ;
rdfs:comment "A phosphorus source utilization phenotype where an organic P-containing compound is used as the source of phosphorus." ;
rdfs:subClassOf obo:OMP_0007043 .
obo:OMP_0007698 a rdfs:Class ;
rdfs:label "cell population phenotype" ;
rdfs:comment "A population phenotype that is observed at the level of a population of microbial cells." ;
rdfs:subClassOf obo:OMP_0007006 .
obo:OMP_0007057 a rdfs:Class ;
rdfs:label "presence of inorganic sulfur utilization" ;
rdfs:comment "A sulfur source utilization phenotype where an organism uses an inorganic S-containing compound as the source of sulfur." ;
rdfs:subClassOf obo:OMP_0007042 .
obo:OMP_0005199 a rdfs:Class ;
rdfs:label "presence of alpha-1,3-mannosyltransferase activity" ;
rdfs:comment "An alpha-1,3-mannosyltransferase activity phenotype where an organism exhibits alpha-1,3-mannosyltransferase activity." ;
rdfs:subClassOf obo:OMP_0005198 .
obo:OMP_0007207 a rdfs:Class ;
rdfs:label "increased resistance to UV-B" ;
rdfs:comment "An increased UV-radiation resistance phenotype where the resistance of microbes in a population to UV-B radiation (typically, 280-315 nm) is increased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0005097 .
obo:OMP_0007016 a rdfs:Class ;
rdfs:label "decreased nutrient import" ;
rdfs:comment "An altered nutrient import phenotype where import is decreased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007015 .
obo:OMP_0007918 a rdfs:Class ;
rdfs:label "altered cell size variability within a cell population" ;
rdfs:subClassOf obo:OMP_0007917 .
obo:OMP_0007309 a rdfs:Class ;
rdfs:label "apoptosis phenotype" ;
rdfs:comment "An energy-dependent, programmed form of cell death that is characterized by phenotypic markers such as increased levels of reactive oxygen species (often detected via DHE staining), externalization of phosphatidylserine (measured by annexin V staining), and DNA fragmentation (detected using the TUNEL assay). Other processes observed during apoptosis include chromosome condensation and breakdown of mitochondria, including loss of membrane potential and release of cytochrome c. Cells undergoing apoptosis do not lose plasma membrane integrity (measured by propidium iodide staining) until late in the process." ;
rdfs:subClassOf obo:OMP_0007308 .
obo:GO_1901360 a rdfs:Class ;
rdfs:label "organic cyclic compound metabolic process" ;
rdfs:comment "The chemical reactions and pathways involving organic cyclic compound." ;
rdfs:subClassOf obo:GO_0071704 .
obo:OMP_0000261 a rdfs:Class ;
rdfs:label "decreased nucleoid area" ;
rdfs:subClassOf obo:OMP_0000260 .
obo:PATO_0000596 a rdfs:Class ;
rdfs:label "decreased volume" ;
rdfs:comment "A volume which is relatively low." ;
rdfs:subClassOf obo:PATO_0000587 , obo:PATO_0000918 .
obo:OMP_0006132 a rdfs:Class ;
rdfs:label "abolished number of pili" ;
rdfs:comment "A decreased number of pili phenotype where the number of pili is decreased to zero." ;
rdfs:subClassOf obo:OMP_0000028 , obo:OMP_0000033 .
obo:OMP_0007624 a rdfs:Class ;
rdfs:label "presence of chitin in cell wall" ;
rdfs:comment "A presence of cell wall phenotype where the cell wall of a microbe contains chitin (CHEBI:17029)." ;
rdfs:subClassOf obo:OMP_0005235 .
obo:OMP_0005062 a rdfs:Class ;
rdfs:label "increased phospholipase activity" ;
rdfs:comment "An altered phospholipase activity phenotype where phospholipase activity is increased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0005028 .
obo:OMP_0007241 a rdfs:Class ;
rdfs:label "post-injection defect" ;
rdfs:comment "An absence of bacteriophage sensitivity phenotype where a bacterium is resistant to a bacteriophage because it cannot support reproduction of the bacteriophage after absorption and injection." ;
rdfs:subClassOf obo:OMP_0007244 .
obo:OMP_0007364 a rdfs:Class ;
rdfs:label "abolished resistance to a nucleoside" ;
rdfs:comment "An decreased resistance to a nucleoside phenotype where resistance to a nucleoside is abolished." ;
rdfs:subClassOf obo:OMP_0007360 , obo:OMP_0007363 .
obo:GO_0071973 a rdfs:Class ;
rdfs:label "bacterial-type flagellum-dependent cell motility" ;
rdfs:comment "Cell motility due to the motion of one or more bacterial-type flagella. A bacterial-type flagellum is a motor complex composed of an extracellular helical protein filament coupled to a rotary motor embedded in the cell envelope." ;
rdfs:subClassOf obo:GO_0097588 .
obo:PATO_0001847 a rdfs:Class ;
rdfs:label "constricted" ;
rdfs:comment "A structural quality inhering in a bearer by virtue of the bearer's being drawn together, compressed or squeezed physically." ;
rdfs:subClassOf obo:PATO_0000141 .
obo:OMP_0008024 a rdfs:Class ;
rdfs:label "endospore cortex phenotype" ;
rdfs:comment "An endospore external encapsulating structure phenotype that relates to the endospore cortex, a layer surrounding an endospore that lies between the outer and inner endospore membranes and consists of peptidoglycan which is typically less cross-linked than that found in vegetable cell walls." ;
rdfs:subClassOf obo:OMP_0007229 .
obo:OMP_0007406 a rdfs:Class ;
rdfs:label "sexual reproduction phenotype" ;
rdfs:comment "A microbial phenotype related to sexual reproduction: the biological process that creates a new organism by combining the genetic material of two organisms. It occurs both in eukaryotes and prokaryotes: in multicellular eukaryotic organisms, an individual is created anew; in prokaryotes, the initial cell has additional or transformed genetic material. In a process called genetic recombination, genetic material (DNA) originating from two different individuals (parents) join up so that homologous sequences are aligned with each other, and this is followed by exchange of genetic information. After the new recombinant chromosome is formed, it is passed on to progeny." ;
rdfs:subClassOf obo:OMP_0007167 .
obo:OMP_0000137 a rdfs:Class ;
rdfs:label "non-pigmented colony" ;
rdfs:comment "A colony pigmentation phenotype colonies are non-pigmented." ;
rdfs:subClassOf obo:OMP_0000107 .
obo:GO_0005623 a rdfs:Class ;
rdfs:label "cell" ;
rdfs:comment "The basic structural and functional unit of all organisms. Includes the plasma membrane and any external encapsulating structures such as the cell wall and cell envelope." ;
rdfs:subClassOf obo:GO_0005575 .
obo:OMP_0000459 a rdfs:Class ;
rdfs:label "increased caffeine resistance" ;
rdfs:comment "An altered caffeine resistance phenotype where resistance is increased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0005001 .
obo:OMP_0007568 a rdfs:Class ;
rdfs:label "resistance to stress phenotype" ;
rdfs:comment "A population growth phenotype related to the resistance or sensitivity that microbes in a population show when exposed to a stress. Typically, a population is deemed resistant to a stress if microbes in the population continue to grow and multiply when exposed to the stress. A population is deemed sensitive to a stress if microbes in the population stop growing and multiplying (and may die) when exposed to the stress." ;
rdfs:subClassOf obo:OMP_0007167 .
obo:OMP_0005096 a rdfs:Class ;
rdfs:label "decreased resistance to x-ray radiation" ;
rdfs:comment "An altered x-ray radiation phenotype where resistance is decreased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0005124 .
obo:OMP_0005024 a rdfs:Class ;
rdfs:label "increased induced expression of the SOS response" ;
rdfs:comment "An altered induced expression of the SOS response phenotype where induced expression of one or more genes in the SOS response is increased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0005053 .
obo:OMP_0007237 a rdfs:Class ;
rdfs:label "bacteriophage sensitivity phenotype" ;
rdfs:comment "A host-virus interaction phenotype related to whether a bacterium can be infected by and/or support growth of a bacteriophage." ;
rdfs:subClassOf obo:OMP_0000026 .
obo:OMP_0005327 a rdfs:Class ;
rdfs:label "absence of agar invasion" ;
rdfs:comment "An agar invasion phenotype where a microbe lacks the ability to penetrate agar media during growth." ;
rdfs:subClassOf obo:OMP_0005325 .
obo:OMP_0007494 a rdfs:Class ;
rdfs:label "abolished motility by twitching" ;
rdfs:comment "A decreased motility by twitching phenotype where the ability of a microbe to move by twitching motility is abolished." ;
rdfs:subClassOf obo:OMP_0007000 , obo:OMP_0007094 , obo:OMP_0007491 .
obo:OMP_0000029 a rdfs:Class ;
rdfs:label "presence of flagellum" ;
rdfs:comment "A flagellum phenotype where the organism possesses a flagellum or flagella in at least some environments." ;
rdfs:subClassOf obo:OMP_0000027 .
obo:PATO_0000051 a rdfs:Class ;
rdfs:label "morphology" ;
rdfs:comment "A quality of a single physical entity inhering in the bearer by virtue of the bearer's size or shape or structure." ;
rdfs:subClassOf obo:PATO_0001241 .
obo:OMP_0000116 a rdfs:Class ;
rdfs:label "pigmented colony" ;
rdfs:comment "A colony pigmentation phenotype where colonies are pigmented." ;
rdfs:subClassOf obo:OMP_0000107 .
obo:OMP_0007635 a rdfs:Class ;
rdfs:label "altered protein level" ;
rdfs:comment "An altered level of substance in a cell phenotype in which the amount of protein measured in a cell is altered relative to a designated control. Total protein or a specific protein may be affected." ;
rdfs:subClassOf obo:OMP_0007634 .
obo:OMP_0007395 a rdfs:Class ;
rdfs:label "presence of lethality" ;
rdfs:comment "A lethality phenotype where infection by a microbe can cause death of the host." ;
rdfs:subClassOf obo:OMP_0007394 .
obo:OMP_0000352 a rdfs:Class ;
rdfs:label "timing of cell constriction phenotype" ;
rdfs:subClassOf obo:OMP_0000349 .
obo:OMP_0007490 a rdfs:Class ;
rdfs:label "absence of motility by swimming" ;
rdfs:comment "An absence of motility phenotype where a microbe is not capable of swimming motility." ;
rdfs:subClassOf obo:OMP_0000133 .
obo:OMP_0007097 a rdfs:Class ;
rdfs:label "increased motility by swimming" ;
rdfs:comment "An increased motility phenotype where the frequency, rate, timing, or extent of motility by swimming is increased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0000045 , obo:OMP_0005324 .
obo:OMP_0007525 a rdfs:Class ;
rdfs:label "absence of lethality in an invertebrate host" ;
rdfs:comment "An absence of lethality phenotype where the infected host is an invertebrate." ;
rdfs:subClassOf obo:OMP_0007396 .
obo:OMP_0005014 a rdfs:Class ;
rdfs:label "piezophilic growth" ;
rdfs:comment "A pressure growth range phenotype where growth is more rapid at high hydrostatic pressure." ;
rdfs:subClassOf obo:OMP_0005012 .
obo:OMP_0007144 a rdfs:Class ;
rdfs:label "altered asexual reproduction" ;
rdfs:comment "An asexual reproduction phenotype where the rate, frequency, timing, or extent of asexual reproduction is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007066 , obo:OMP_0007157 .
obo:OMP_0005231 a rdfs:Class ;
rdfs:label "decreased cell fusion during mating" ;
rdfs:comment "An altered cell fusion during mating phenotype where the frequency, rate, timing, or extent of cell fusion is decreased during mating." ;
rdfs:subClassOf obo:OMP_0005229 .
obo:OMP_0000036 a rdfs:Class ;
rdfs:label "increased amount of capsule" ;
rdfs:comment "An altered capsule phenotype where the amount of capsule is increased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007133 .
obo:OMP_0006177 a rdfs:Class ;
rdfs:label "abolished multiple fission" ;
rdfs:comment "A decreased multiple fission phenotype where the rate, frequency, timing, or extent of the process of multiple fission is abolished." ;
rdfs:subClassOf obo:OMP_0006175 , obo:OMP_0007235 .
obo:OMP_0007848 a rdfs:Class ;
rdfs:label "phenolic chemical resistance phenotype" ;
rdfs:comment "A chemical resistance phenotype relating to resistance or sensitivity of a microbe to a member or members of the class phenols, which are organic aromatic compounds having one or more hydroxy groups attached to a benzene or other arene ring." ;
rdfs:subClassOf obo:OMP_0007195 .
obo:GO_0034654 a rdfs:Class ;
rdfs:label "nucleobase-containing compound biosynthetic process" ;
rdfs:comment "The chemical reactions and pathways resulting in the formation of nucleobases, nucleosides, nucleotides and nucleic acids." ;
rdfs:subClassOf obo:GO_0006139 , obo:GO_0018130 , obo:GO_0019438 , obo:GO_0044271 , obo:GO_1901362 .
obo:OMP_0007200 a rdfs:Class ;
rdfs:label "presence of resistance to UV-C radiation" ;
rdfs:comment "A presence of resistance to UV radiation where microbes in a population continue to grow and divide when exposed to UV-C radiation (typically, wavelengths of 100-280 nm)." ;
rdfs:subClassOf obo:OMP_0007282 .
obo:GO_0044711 a rdfs:Class ;
rdfs:label "single-organism biosynthetic process" ;
rdfs:comment "A biosynthetic process - chemical reactions and pathways resulting in the formation of substances - involving a single organism." ;
rdfs:subClassOf obo:GO_0009058 , obo:GO_0044710 .
obo:OMP_0000380 a rdfs:Class ;
rdfs:label "decreased acid tolerance response" ;
rdfs:subClassOf obo:OMP_0000378 .
obo:OMP_0000132 a rdfs:Class ;
rdfs:label "pleomorphic cell shape" ;
rdfs:comment "A cell shape phenotype where a cell is variable in shape and lacks a single, characteristic form." ;
rdfs:subClassOf obo:OMP_0000073 .
obo:PATO_0000044 a rdfs:Class ;
rdfs:label "frequency" ;
rdfs:comment "A physical quality which inheres in a bearer by virtue of the number of the bearer's repetitive actions in a particular time." ;
rdfs:subClassOf obo:PATO_0000161 .
obo:OMP_0005003 a rdfs:Class ;
rdfs:label "hyperthermophile" ;
rdfs:comment "A population growth phenotype where optimal growth of a microbial population occurs between 85 C and 113 C." ;
rdfs:subClassOf obo:OMP_0005002 .
obo:OMP_0007888 a rdfs:Class ;
rdfs:label "increased resistance to a metal" ;
rdfs:comment "A metal resistance phenotype where growth and reproduction of a microbe in the presence of a metal is increased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007889 .
obo:OMP_0007558 a rdfs:Class ;
rdfs:label "clamp cell formation phenotype" ;
rdfs:comment "A xxx phenotype relating to the formation of clamp cells, which are hook-shaped cells found at the septa of dikaryotic hyphae. Clamp cells develop from the most apical cells (tip cells) of the dikaryotic hyphae." ;
rdfs:subClassOf obo:OMP_0007557 .
obo:OMP_0008032 a rdfs:Class ;
rdfs:label "altered outer membrane" ;
rdfs:comment "An outer endospore membrane phenotype where the outer membrane is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0008010 .
obo:OMP_0007345 a rdfs:Class ;
rdfs:label "altered nuclear position" ;
rdfs:comment "A nuclear position phenotype where the location of the nucleus or nuclei within a cell or between separating cells is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007103 , obo:OMP_0007344 .
obo:OMP_0007859 a rdfs:Class ;
rdfs:label "increased resistance to fosfomycin" ;
rdfs:comment "An altered fosfomycin resistance phenotype where the ability of a microbe to grow and reproduce in the presence of fosfomycin is increased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007858 .
obo:OMP_0005019 a rdfs:Class ;
rdfs:label "absence of phospholipase activity" ;
rdfs:comment "A phospholipase activity phenotype where an organism doesn't exhibit phospholipase activity." ;
rdfs:subClassOf obo:OMP_0005000 .
obo:OMP_0007122 a rdfs:Class ;
rdfs:label "altered translation" ;
rdfs:comment "A translation phenotype where translation of one or more mRNAs is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007080 , obo:OMP_0007107 .
obo:OMP_0007288 a rdfs:Class ;
rdfs:label "altered laccase activity" ;
rdfs:comment "A laccase activity phenotype where laccase activity is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0005130 , obo:OMP_0007131 , obo:OMP_0007285 .
obo:OMP_0000211 a rdfs:Class ;
rdfs:label "absence of capsule" ;
rdfs:comment "A capsule phenotype where a cell or cells lack capsule." ;
rdfs:subClassOf obo:OMP_0000203 .
obo:OMP_0007211 a rdfs:Class ;
rdfs:label "altered trace element utilization" ;
rdfs:comment "A trace element utilization phenotype that is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0000450 , obo:OMP_0007104 .
obo:OMP_0007899 a rdfs:Class ;
rdfs:label "resistant to bile acids" ;
rdfs:comment "A bile acids resistance phenotype where growth and reproduction of a microbe occurs in the presence of bile acids." ;
rdfs:subClassOf obo:OMP_0007898 .
obo:OMP_0006090 a rdfs:Class ;
rdfs:label "urease negative" ;
rdfs:comment "A urease test phenotype where an organism doesn't exhibit urease activity." ;
rdfs:subClassOf obo:OMP_0000222 .
obo:OMP_0000222 a rdfs:Class ;
rdfs:label "urease test phenotype" ;
rdfs:comment "A differential test phenotype that relates to the presence or absence of urease, an enzyme that hydrolyzes urea to ammonia and carbon dioxide." ;
rdfs:subClassOf obo:OMP_0007130 .
obo:OMP_0000154 a rdfs:Class ;
rdfs:label "undulate margin" ;
rdfs:comment "A colony margin phenotype characterized by wavy growth along the colony edge." ;
rdfs:subClassOf obo:OMP_0000149 .
obo:OMP_0007267 a rdfs:Class ;
rdfs:label "altered drug-dependence of population growth" ;
rdfs:comment "A drug-dependent population growth phenotype where dependence of reproduction on the presence of a drug in the growth medium is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007157 , obo:OMP_0007264 .
obo:OMP_0000143 a rdfs:Class ;
rdfs:label "single nucleoid" ;
rdfs:comment "A nucleoid number phenotype where there is only one nucleoid region in the cell." ;
rdfs:subClassOf obo:OMP_0000043 .
obo:OMP_0005382 a rdfs:Class ;
rdfs:label "tail morphology phenotype" ;
rdfs:comment "A virion morphology phenotype that is referring to the form and structure of tails on viral particles." ;
rdfs:subClassOf obo:OMP_0007541 .
obo:OMP_0007334 a rdfs:Class ;
rdfs:label "autophagic vesicle formation phenotype" ;
rdfs:comment "An autophagy phenotype related to the formation of autophagic vesicles." ;
rdfs:subClassOf obo:OMP_0007333 .
obo:OMP_0005152 a rdfs:Class ;
rdfs:label "increased ferric reductase activity" ;
rdfs:comment "An altered ferric reductase activity phenotype where ferric reductase activity is increased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0005150 .
obo:OMP_0007872 a rdfs:Class ;
rdfs:label "increased resistance to A22" ;
rdfs:comment "This term and was deemed to be too granular. Instead, use OMP:0007878 increased resistance to an antimicrobial agent and enter database identifier for A22 in the Annotation Extension field." .
obo:OMP_0007793 a rdfs:Class ;
rdfs:label "presence of vegetative cell population growth" ;
rdfs:comment "A cell population phenotype where a population of microbial cells in the vegetative growth phase of the life cycle increases in number." ;
rdfs:subClassOf obo:OMP_0007595 .
obo:OMP_0007832 a rdfs:Class ;
rdfs:label "increased resistance to sulfonamide" ;
rdfs:comment "An altered sulfonamide antimicrobial agent resistance phenotype where resistance of a microbe to a sulfonamide antimicrobial agent is increased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007831 .
obo:CHEBI_33281 a rdfs:Class ;
rdfs:label "antimicrobial agent" ;
rdfs:comment "A substance that kills or slows the growth of microorganisms, including bacteria, viruses, fungi and protozoans." ;
rdfs:subClassOf obo:CHEBI_24432 , obo:CHEBI_25944 .
obo:OMP_0007487 a rdfs:Class ;
rdfs:label "abolished resistance to quaternary ammonium salt antimicrobial agent" ;
rdfs:comment "A decreased resistance to quaternary ammonium salts where resistance to quaternary ammonium salts is abolished." ;
rdfs:subClassOf obo:OMP_0007483 , obo:OMP_0007486 .
obo:OMP_0007923 a rdfs:Class ;
rdfs:label "decreased cell size variability within a cell population" ;
rdfs:subClassOf obo:OMP_0007918 .
obo:OMP_0000287 a rdfs:Class ;
rdfs:label "altered fraction of non-constricted cells" ;
rdfs:comment "population growth phenotype" ;
rdfs:subClassOf obo:OMP_0000350 .
obo:GO_0009453 a rdfs:Class ;
rdfs:label "energy taxis" ;
rdfs:comment "The directed movement of a motile cell or organism in response to physical parameters involved in energy generation, such as light, oxygen, and oxidizable substrates." ;
rdfs:subClassOf obo:GO_0042330 .
obo:OMP_0006013 a rdfs:Class ;
rdfs:label "altered transposable element transposition phenotype" ;
rdfs:comment "A transposable element transposition phenotype where the frequency, rate, timing, or extent of transposable element transposition is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0005059 .
obo:OMP_0007702 a rdfs:Class ;
rdfs:label "decreased cell population viability" ;
rdfs:comment "An altered cell population viability phenotype where the proportion of cells that survive a specified treatment is decreased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007459 .
obo:OMP_0000018 a rdfs:Class ;
rdfs:label "absence of endospore formation" ;
rdfs:comment "An endospore formation phenotype where the cell does not possess the ability to form an endospore." ;
rdfs:subClassOf obo:OMP_0000094 , obo:OMP_0007236 .
obo:OMP_0000233 a rdfs:Class ;
rdfs:label "decreased cell aspect ratio variability" ;
rdfs:subClassOf obo:OMP_0000227 .
obo:OMP_0005260 a rdfs:Class ;
rdfs:label "transport phenotype" ;
rdfs:comment "A cellular process phenotype relating to transport, which is the directed movement of substances (such as macromolecules, small molecules, ions) or cellular components (such as complexes and organelles) into, out of, or within a cell, or between cells, or within a multicellular organism by means of some agent such as a transporter, pore or motor protein." ;
rdfs:subClassOf obo:OMP_0007332 .
obo:OMP_0005029 a rdfs:Class ;
rdfs:label "altered tetracycline resistance" ;
rdfs:comment "A tetracycline resistance phenotype where resistance to a tetracycline compound is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0006062 , obo:OMP_0007134 .
obo:OMP_0000093 a rdfs:Class ;
rdfs:label "akinete formation phenotype" ;
rdfs:comment "A cell development phenotype related to the development of an akinete, a thick-walled dormant cell derived from the enlargement of a vegetative cell." ;
rdfs:subClassOf obo:OMP_0007142 .
obo:OMP_0005383 a rdfs:Class ;
rdfs:label "presence of tail" ;
rdfs:comment "A tail morphology phenotype where the virus has a tail present." ;
rdfs:subClassOf obo:OMP_0005382 .
obo:OMP_0007687 a rdfs:Class ;
rdfs:label "altered cell growth" ;
rdfs:comment "A cell growth phenotype where the rate, timing, or extent of cell growth is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007342 , obo:OMP_0007684 .
obo:OMP_0007103 a rdfs:Class ;
rdfs:label "altered cell morphology" ;
rdfs:comment "A cell morphology phenotype where the morphology (i.e., size, shape, and structure) of a cell is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0000071 , obo:OMP_0007085 .
obo:OMP_0007413 a rdfs:Class ;
rdfs:label "conjugation phenotype" ;
rdfs:comment "A multi-organism process phenotype relating to the union or introduction of genetic information from compatible cell types that results in a genetically different individual. Conjugation requires direct cellular contact between the organisms." ;
rdfs:subClassOf obo:OMP_0005116 .
obo:OMP_0005046 a rdfs:Class ;
rdfs:label "gene silencing phenotype" ;
rdfs:comment "A genetic material phenotype dealing with the transcriptional or post-transcriptional processes carried out at the cellular level that results in long-term gene inactivation." ;
rdfs:subClassOf obo:OMP_0000000 , obo:OMP_0000290 , obo:OMP_0007194 .
obo:OMP_0007299 a rdfs:Class ;
rdfs:label "absence of acid-fast stain" ;
rdfs:comment "An acid-fast stain phenotype where a cell or cells that have been stained, typically with carbolfuchsin, are not easily decolorized by acid--alcohol." ;
rdfs:subClassOf obo:OMP_0000199 .
obo:OMP_0005297 a rdfs:Class ;
rdfs:label "absence of colonization of mouse tissue" ;
rdfs:comment "A colonization of mouse tissue phenotype where a microbe is unable to colonize mouse tissue." ;
rdfs:subClassOf obo:OMP_0005283 , obo:OMP_0005295 .
obo:OMP_0006042 a rdfs:Class ;
rdfs:label "not resistant to quinolone" ;
rdfs:comment "A quinoline compound resistance phenotype where an organism or cell is sensitive to one or more quinolone compounds." ;
rdfs:subClassOf obo:OMP_0006029 .
obo:OMP_0005376 a rdfs:Class ;
rdfs:label "increased positive osmotaxis" ;
rdfs:comment "An increased osmotaxis phenotype where positive osmotaxis by a motile microbe is increased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0005374 .
obo:OMP_0005310 a rdfs:Class ;
rdfs:label "presence of colonization of rabbit tissue" ;
rdfs:comment "A colonization of rabbit tissue phenotype where a microbe is able to colonize rabbit tissue." ;
rdfs:subClassOf obo:OMP_0005282 , obo:OMP_0005309 .
obo:OMP_0005109 a rdfs:Class ;
rdfs:label "decreased cell diameter" ;
rdfs:comment """MERGED DEFINITION: An altered cell size phenotype where the diameter of a microbial cell with a circular cross-section is decreased relative to a designated control.
TARGET DEFINITION: An altered cell size phenotype where the diameter of a coccus-shaped (spherical) microbial cell or cells is decreased relative to a designated control.
--------------------
SOURCE DEFINITION: An altered cell size phenotype where the width of a non-coccus, i.e. rod- or spiral-shaped, microbial cell or cells is decreased relative to a designated control.""" ;
rdfs:subClassOf obo:OMP_0000040 .
obo:OMP_0005072 a rdfs:Class ;
rdfs:label "absence of mitotic recombination" ;
rdfs:comment "A mitotic recombination phenotype where a cell or cells lack the ability to perform mitotic recombination." ;
rdfs:subClassOf obo:OMP_0005045 .
obo:OMP_0000092 a rdfs:Class ;
rdfs:label "heterocyst formation phenotype" ;
rdfs:comment "A cell development phenotype related to development of a heterocyst, a differentiated cell in certain cyanobacteria whose purpose is to fix nitrogen." ;
rdfs:subClassOf obo:OMP_0000070 .
obo:OMP_0007821 a rdfs:Class ;
rdfs:label "nitrofuran resistance phenotype" ;
rdfs:comment "An antimicrobial agent resistance phenotype related to resistance or sensitivity to a nitrofuran compound. Nitrofurans are members of the class of furans in which the furan ring is substituted by a nitro group." ;
rdfs:subClassOf obo:OMP_0000274 .
obo:OMP_0005388 a rdfs:Class ;
rdfs:label "presence of contractile tail" ;
rdfs:comment "A phage tail phenotype where the tail contracts to inject its DNA into the host." ;
rdfs:subClassOf obo:OMP_0005383 .
obo:OMP_0005104 a rdfs:Class ;
rdfs:label "abolished resistance to dessication stress" ;
rdfs:comment "A decreased resistance to dessication stress phenotype where the resistance of microbes in a population to dessication stress is abolished." ;
rdfs:subClassOf obo:OMP_0005088 .
obo:OMP_0008054 a rdfs:Class ;
rdfs:label "increased plaque size phenotype" ;
rdfs:comment "A bacteriophage plaque morphology phenotype where the size of viral plaque is increased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0008049 .
obo:OMP_0000391 a rdfs:Class ;
rdfs:label "absence of transcription of gene or operon" ;
rdfs:subClassOf obo:OMP_0007106 .
obo:OMP_0007082 a rdfs:Class ;
rdfs:label "altered vitamin/enzyme cofactor requirement" ;
rdfs:comment "An altered growth factor requirement phenotype where the requirement for a vitamin/enzyme cofactor in the growth medium s altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007040 , obo:OMP_0007079 .
obo:PATO_0002301 a rdfs:Class ;
rdfs:label "decreased quality" ;
rdfs:comment "A quality that has a value that is decreased compared to normal or average." ;
rdfs:subClassOf obo:PATO_0000001 , obo:PATO_0000069 .
obo:OMP_0006154 a rdfs:Class ;
rdfs:label "abolished utilization of organic phosphorus" ;
rdfs:comment "A decreased utilization of organic phosphorus phenotype where the ability to utilize organic phosphorus is abolished." ;
rdfs:subClassOf obo:OMP_0007050 .
obo:OMP_0007920 a rdfs:Class ;
rdfs:label "absence of cell population growth" ;
rdfs:subClassOf obo:OMP_0007794 .
obo:OMP_0007830 a rdfs:Class ;
rdfs:label "not resistant to a sulfonamide antimicrobial agent" ;
rdfs:comment "A sulfonamide antimicrobial agent resistance phenotype where growth and reproduction of a microbe does not occur in the presence of a sulfonamide antimicrobial agent." ;
rdfs:subClassOf obo:OMP_0007828 .
obo:OMP_0007391 a rdfs:Class ;
rdfs:label "abolished cell viability" ;
rdfs:comment "A decreased viability phenotype where the viability of a microbe, cell, or cells is abolished under the specified conditions." ;
rdfs:subClassOf obo:OMP_0007261 .
obo:OMP_0005115 a rdfs:Class ;
rdfs:label "cell cycle phenotype" ;
rdfs:comment "A cellular process phenotype that relates to the progression of biochemical and morphological events that occur in a cell during cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in some cells or organisms DNA replication and/or nuclear division may not be immediately followed by cell division." ;
rdfs:subClassOf obo:OMP_0007332 .
obo:OMP_0007424 a rdfs:Class ;
rdfs:label "increased budding frequency" ;
rdfs:comment "An increased budding phenotype where the fraction of budded cells (budding index) in a proliferating cell population is increased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0006004 .
obo:OMP_0000323 a rdfs:Class ;
rdfs:label "presence of cell area variability" ;
rdfs:subClassOf obo:OMP_0007921 .
obo:OMP_0006083 a rdfs:Class ;
rdfs:label "altered oxidase test result" ;
rdfs:comment "An oxidase test phenotype where the phenotype of an organism is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0000220 , obo:OMP_0007131 .
obo:GO_0001539 a rdfs:Class ;
rdfs:label "cilium or flagellum-dependent cell motility" ;
rdfs:comment "Cell motility due to movement of eukaryotic cilia or bacterial-type flagella or archaeal-type flagella." ;
rdfs:subClassOf obo:GO_0048870 .
obo:OMP_0005040 a rdfs:Class ;
rdfs:label "response to acid pH stress phenotype" ;
rdfs:comment "A stress response phenotype dealing with the response to the environmental stress of pH at or below 6.5." ;
rdfs:subClassOf obo:OMP_0000173 .
obo:OMP_0006002 a rdfs:Class ;
rdfs:label "altered homologous recombination" ;
rdfs:comment "A homologous recombination phenotype where the frequency, rate, timing, or extent of recombination is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0005042 .
obo:OMP_0000306 a rdfs:Class ;
rdfs:label "macromolecular biosynthesis phenotype" ;
rdfs:comment "A biosynthesis phenotype dealing with the chemical reactions and pathways resulting in the formation of a macromolecule, any molecule of high relative molecular mass, the structure of which essentially comprises the multiple repetition of units derived, actually or conceptually, from molecules of low relative molecular mass." ;
rdfs:subClassOf obo:OMP_0000309 .
obo:OMP_0007323 a rdfs:Class ;
rdfs:label "decreased mucoidy" ;
rdfs:comment "An altered mucoid colony pheotype where colonies are less mucoid than a designated control." ;
rdfs:subClassOf obo:OMP_0007321 .
obo:OMP_0005308 a rdfs:Class ;
rdfs:label "abolished colonization of tissue in an immunocompromised mouse" ;
rdfs:comment "A decreased colonization of tissue in an immunocompromised mouse phenotype where colonization is abolished." ;
rdfs:subClassOf obo:OMP_0005307 .
obo:OMP_0000217 a rdfs:Class ;
rdfs:label "increased hemolysis" ;
rdfs:comment "An altered hemolysis phenotype where hemolysis is increased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0000206 .
obo:OMP_0007760 a rdfs:Class ;
rdfs:label "altered actin cytoskeleton" ;
rdfs:comment "An actin cytoskeleton phenotype where the amount, distribution, or morphology of all or part of the actin cytoskeleton is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007758 .
obo:OMP_0007222 a rdfs:Class ;
rdfs:label "growth rate control of transcription" ;
rdfs:comment "A transcription regulation phenotype where the level of a transcript(s) increases as the growth rate of the culture increases." ;
rdfs:subClassOf obo:OMP_0007163 .
obo:OMP_0005280 a rdfs:Class ;
rdfs:label "resistant to organic heterocyclic compound" ;
rdfs:comment "An organic heterocyclic compound resistance phenotype where an organism, cell, or cells is resistant to an organic heterocyclic compounds." ;
rdfs:subClassOf obo:OMP_0005274 .
obo:OMP_0000007 a rdfs:Class ;
rdfs:label "absence of akinete formation" ;
rdfs:comment "An akinete formation phenotype where a cell or cells do not possess the ability to form an akinete." ;
rdfs:subClassOf obo:OMP_0000093 , obo:OMP_0007236 .
obo:OMP_0007883 a rdfs:Class ;
rdfs:label "abolished chemical resistance" ;
rdfs:comment "A decreased resistance to a chemical phenotype where resistance to the specified chemical is abolished." ;
rdfs:subClassOf obo:OMP_0007249 .
obo:OMP_0007613 a rdfs:Class ;
rdfs:label "increased frequency of single-strand DNA breaks" ;
rdfs:comment "An increased frequency of DNA breaks phenotype where the frequency of single-strand breaks in chromosomal DNA is increased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007606 .
obo:PATO_0001629 a rdfs:Class ;
rdfs:label "aggregated" ;
rdfs:comment "A spatial pattern inhering in a bearer by virtue of the bearer's being gathered or tending to gather into a mass or whole." ;
rdfs:subClassOf obo:PATO_0000330 .
obo:OMP_0007543 a rdfs:Class ;
rdfs:label "presence of haploid fruiting" ;
rdfs:comment "A haploid fruiting phenotype where a microbe can reproduce by the process of haploid fruiting." ;
rdfs:subClassOf obo:OMP_0007542 .
obo:OMP_0005377 a rdfs:Class ;
rdfs:label "sexual sporulation frequency" ;
rdfs:comment "A sporulation frequency phenotype relating to the fraction of cells in a population that undergo meiosis and forms spores under sporulation-inducing conditions." ;
rdfs:subClassOf obo:OMP_0005373 .
obo:OMP_0007316 a rdfs:Class ;
rdfs:label "abolished superoxide dismutase activity" ;
rdfs:comment "A decreased superoxide dismutase activity phenotype where superoxide dismutase activity is abolished." ;
rdfs:subClassOf obo:OMP_0005167 , obo:OMP_0005169 .
obo:PATO_0000944 a rdfs:Class ;
rdfs:label "sharpness" ;
rdfs:comment "A shape quality inhering in a bearer by virtue of the bearer's having a sharp or tapered end or point." ;
rdfs:subClassOf obo:PATO_0000052 .
obo:OMP_0007020 a rdfs:Class ;
rdfs:label "increased biofilm formation" ;
rdfs:comment "An altered biofilm phenotype where the amount of biofilm is increased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0005129 .
obo:OMP_0007450 a rdfs:Class ;
rdfs:label "increased lethality in mice" ;
rdfs:comment "A decreased lethality phenotype where the ability of an infectious microbe to cause death of its murine host is decreased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007400 .
obo:OMP_0007093 a rdfs:Class ;
rdfs:label "decreased motility by swimming" ;
rdfs:comment "A decreased motility phenotype where the frequency, rate, timing, or extent of motility by swimming is decreased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0000002 , obo:OMP_0005324 .
obo:OMP_0007991 a rdfs:Class ;
rdfs:label "decreased cell volume variability" ;
rdfs:subClassOf obo:OMP_0007990 .
obo:GO_0019538 a rdfs:Class ;
rdfs:label "protein metabolic process" ;
rdfs:comment "The chemical reactions and pathways involving a specific protein, rather than of proteins in general. Includes protein modification." ;
rdfs:subClassOf obo:GO_0043170 , obo:GO_0044238 .
obo:OMP_0007133 a rdfs:Class ;
rdfs:label "altered capsule phenotype" ;
rdfs:comment "A capsule phenotype where the capsule layer is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0000203 .
obo:OMP_0007942 a rdfs:Class ;
rdfs:label "increased survival in macrophage" ;
rdfs:subClassOf obo:OMP_0007454 .
obo:OMP_0000105 a rdfs:Class ;
rdfs:label "aerotolerant anaerobe" ;
rdfs:comment "A microbial phenotype that describes a microorganism that does not require oxygen gas (O2) for growth and doesn't utilize O2 even when it is present." ;
rdfs:subClassOf obo:OMP_0007928 .
obo:OMP_0007529 a rdfs:Class ;
rdfs:label "absence of lethality in an amoeba host" ;
rdfs:comment "An absence of lethality phenotype where infection by a microbe doesn't cause death of an amoeba host." ;
rdfs:subClassOf obo:OMP_0007396 .
obo:OMP_0007670 a rdfs:Class ;
rdfs:label "altered transport" ;
rdfs:comment "A transport phenotype where transport of a specific substrate(s) into, out of, or within a cell or between cells is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0005260 .
obo:OMP_0000464 a rdfs:Class ;
rdfs:label "absence of an outer membrane" ;
rdfs:comment "An outer membrane phenotype where a cell or cells lack an outer membrane." ;
rdfs:subClassOf obo:OMP_0000461 .
obo:OMP_0007508 a rdfs:Class ;
rdfs:label "absence of titan cells" ;
rdfs:comment "A titan cell phenotype where a microbe cannot form titan cells." ;
rdfs:subClassOf obo:OMP_0007506 .
obo:OMP_0007402 a rdfs:Class ;
rdfs:label "presence of ascospore formation" ;
rdfs:comment "An ascospore formation phenotype where a microbe has the ability to form ascospores." ;
rdfs:subClassOf obo:OMP_0007401 .
obo:GO_0043107 a rdfs:Class ;
rdfs:label "type IV pilus-dependent motility" ;
rdfs:comment "Any process involved in the controlled movement of a bacterial cell which is dependent on the presence of type IV pili. Includes social gliding motility and twitching motility." ;
rdfs:subClassOf obo:GO_0048870 .
obo:OMP_0007360 a rdfs:Class ;
rdfs:label "not resistant to a nucleoside" ;
rdfs:comment "A nucleoside resistance phenotype where an organism, cell, or cells is not resistant to a nucleoside." ;
rdfs:subClassOf obo:OMP_0007358 .
obo:OMP_0000356 a rdfs:Class ;
rdfs:label "decreased relative timing of cell constriction" ;
rdfs:subClassOf obo:OMP_0000354 .
obo:OMP_0000081 a rdfs:Class ;
rdfs:label "lophotrichous" ;
rdfs:comment "A flagellum distribution phenotype where an organism has multiple flagella located at one or both ends of a cell." ;
rdfs:subClassOf obo:OMP_0000078 .
obo:OMP_0006078 a rdfs:Class ;
rdfs:label "decarboxylase negative" ;
rdfs:comment "A decarboxylase test phenotype where an organism doesn't exhibit decarboxylase activity." ;
rdfs:subClassOf obo:OMP_0000219 .
obo:OMP_0008013 a rdfs:Class ;
rdfs:label "endospore internal structure phenotype" ;
rdfs:comment "An endospore morphology phenotype that relates to the inner membrane or core of an endospore." ;
rdfs:subClassOf obo:OMP_0007228 .
obo:OMP_0007861 a rdfs:Class ;
rdfs:label "abolished fosfomycin resistance" ;
rdfs:comment "A decreased fosfomycin resistance phenotype where the ability of a microbe to grow and reproduce in the presence of fosfomycin is abolished." ;
rdfs:subClassOf obo:OMP_0007857 , obo:OMP_0007860 .
obo:OMP_0007913 a rdfs:Class ;
rdfs:label "increased resistance to a chelator" ;
rdfs:subClassOf obo:OMP_0007911 .
obo:OMP_0000179 a rdfs:Class ;
rdfs:label "colony size phenotype" ;
rdfs:comment "A colony morphology phenotype dealing with the size of the colony." ;
rdfs:subClassOf obo:OMP_0000100 .
obo:OMP_0005195 a rdfs:Class ;
rdfs:label "abolished anaerobic population growth" ;
rdfs:comment "An altered anaerobic population growth phenotype where growth of a microbial population in the absence of oxygen is abolished." ;
rdfs:subClassOf obo:OMP_0005191 , obo:OMP_0007927 .
obo:OMP_0007852 a rdfs:Class ;
rdfs:label "increased inorganic carbon source utilization" ;
rdfs:comment "An altered carbon source utilization phenotype where the ability to use an inorganic carbon source is increased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007078 .
obo:OMP_0007934 a rdfs:Class ;
rdfs:label "absence of resistance to nutrient limitation" ;
rdfs:comment "A resistance to stress phenotype where a microbial population isn't resistant to limitation for an essential nutrient." ;
rdfs:subClassOf obo:OMP_0007932 .
obo:OMP_0000239 a rdfs:Class ;
rdfs:label "plicate colony surface" ;
rdfs:comment "A colony surface phenotype that is characterized by a surface arranged in parallel folds or ridges; pleated." ;
rdfs:subClassOf obo:OMP_0000210 .
obo:OMP_0007902 a rdfs:Class ;
rdfs:label "increased resistance to bile acids" ;
rdfs:comment "An altered resistance to bile acids phenotype where growth and reproduction of a microbe in the presence of bile acids is increased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007901 .
obo:OMP_0007030 a rdfs:Class ;
rdfs:label "increased utilization of dinitrogen" ;
rdfs:comment "A dinitrogen (N2) utilization phenotype where the nitrogen source is increased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007190 .
obo:OMP_0000082 a rdfs:Class ;
rdfs:label "peritrichous flagella" ;
rdfs:comment "A flagellum distribution phenotype where an organism has multiple flagella dispersed across the cell surface." ;
rdfs:subClassOf obo:OMP_0000078 .
obo:CHEBI_24431 a rdfs:Class ;
rdfs:label "chemical entity" ;
rdfs:comment "A chemical entity is a physical entity of interest in chemistry including molecular entities, parts thereof, and chemical substances." .
obo:OMP_0007068 a rdfs:Class ;
rdfs:label "multiple fission phenotype" ;
rdfs:comment "An asexual reproduction phenotype related to the process of multiple fission, where the genome is multiplied multiple times prior to division of the cytoplasm and formation of multiple daughter cells." ;
rdfs:subClassOf obo:OMP_0007066 .
obo:OMP_0000385 a rdfs:Class ;
rdfs:label "presence of cell-cell self recognition" ;
rdfs:comment "A cell-cell self-recognition phenotype where cells of a microbial strain recognizes self and different populations of the same strain will merge when grown on solid medium." ;
rdfs:subClassOf obo:OMP_0000383 .
obo:OMP_0005338 a rdfs:Class ;
rdfs:label "presence of cell lysis" ;
rdfs:comment "A cell lysis phenotype where cytolysis occurs." ;
rdfs:subClassOf obo:OMP_0005336 .
obo:OMP_0000186 a rdfs:Class ;
rdfs:label "increased cell circularity variability" ;
rdfs:subClassOf obo:OMP_0000138 .
obo:OMP_0007070 a rdfs:Class ;
rdfs:label "decreased organic carbon source utilization" ;
rdfs:comment "An altered carbon source utilization phenotype where the ability to use an organic carbon source is decreased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007078 .
obo:OMP_0005083 a rdfs:Class ;
rdfs:label "response to ionizing radiation phenotype" ;
rdfs:comment "A response to radiation stress phenotype dealing with short wavelength, highly energetic radiation." ;
rdfs:subClassOf obo:OMP_0005081 .
obo:OMP_0007519 a rdfs:Class ;
rdfs:label "altered population growth in high osmolarity" ;
rdfs:comment "A population growth phenotype where the growth of a microbial population in conditions of high osmolarity is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007516 , obo:OMP_0007523 .
obo:OMP_0007769 a rdfs:Class ;
rdfs:label "altered septum morphology during vegetative growth" ;
rdfs:comment "A physical cellular phenotype observed in the vegetative growth phase of the life cycle in the which the size, shape, or structure of the septum is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007768 .
obo:OMP_0007739 a rdfs:Class ;
rdfs:label "altered germ tube morphology" ;
rdfs:comment "A cell morphology phenotype where the shape, size, structure, or number of germ tubes is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007738 .
obo:OMP_0000240 a rdfs:Class ;
rdfs:label "punctiform colony" ;
rdfs:comment "A colony form phenotype where a colony or colonies are small, but not microscopic, with a diameter of <1 mm." ;
rdfs:subClassOf obo:OMP_0000103 .
obo:OMP_0005321 a rdfs:Class ;
rdfs:label "decreased colonization of tissue in an immunocompromised rabbit" ;
rdfs:comment "An altered colonization of tissue in an immunocompromised rabbit phenotype where the frequency, rate, timing, or extent of colonization is decreased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0005319 .
obo:OMP_0008008 a rdfs:Class ;
rdfs:label "absence of an endospore coat" ;
rdfs:comment "An endospore coat phenotype where an endospore lacks a coat layer." ;
rdfs:subClassOf obo:OMP_0008007 .
obo:OMP_0007305 a rdfs:Class ;
rdfs:label "altered utilization of inorganic nitrogen source" ;
rdfs:comment "An inorganic nitrogen source utilization phenotype that is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007013 , obo:OMP_0007905 .
obo:OMP_0005068 a rdfs:Class ;
rdfs:label "increased mutation frequency" ;
rdfs:comment "An altered mutation frequency phenotype where the mutation frequency is increased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0006071 .
obo:OMP_0000325 a rdfs:Class ;
rdfs:label "presence of cell volume variability" ;
rdfs:subClassOf obo:OMP_0007921 .
obo:OMP_0007457 a rdfs:Class ;
rdfs:label "viable cell population" ;
rdfs:comment "A cell population viability phenotype where all, or almost all, of the cells are viable under the specified conditions." ;
rdfs:subClassOf obo:OMP_0007705 .
obo:OMP_0005126 a rdfs:Class ;
rdfs:label "altered resistance to SDS-EDTA stress" ;
rdfs:comment "An altered chemical stress phenotype where the resistance or sensitivity that microbes in a population show when exposed to SDS-EDTA is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007586 .
obo:OMP_0000435 a rdfs:Class ;
rdfs:label "resistant to aminopyrimidine" ;
rdfs:comment "An aminopyrimidine resistance phenotype where an organism or cell is resistant to one or more aminopyrimidine compounds." ;
rdfs:subClassOf obo:OMP_0000331 .
obo:PATO_0005012 a rdfs:Class ;
rdfs:label "complete structure" ;
rdfs:comment "A structural quality inhering in a bearer by virtue of the bearer being fully formed compared to entities lacking parts." ;
rdfs:subClassOf obo:PATO_0000141 .
obo:OMP_0005282 a rdfs:Class ;
rdfs:label "presence of colonization of host tissue" ;
rdfs:comment "A colonization of host tissue phenotype where a microbe is able to colonize the tissue of a host." ;
rdfs:subClassOf obo:OMP_0005281 .
obo:OMP_0005371 a rdfs:Class ;
rdfs:label "altered osmotaxis" ;
rdfs:comment "An osmotaxis phenotype where directed movement of a motile microbe in response to an osmotic concentration gradient is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0005361 , obo:OMP_0007127 .
obo:OMP_0007728 a rdfs:Class ;
rdfs:label "altered mitotic cell cycle" ;
rdfs:comment "A cellular process phenotype in which the rate, frequency, or occurrence of progression of a cell through a mitotic cell cycle is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0005136 .
obo:OMP_0005398 a rdfs:Class ;
rdfs:label "dodecahedral capsid shape" ;
rdfs:comment "A capsid morphology phenotype where the capsid is shaped like a dodecahedron which is a polyhedron with 12 plane faces." ;
rdfs:subClassOf obo:OMP_0005394 .
obo:OMP_0007435 a rdfs:Class ;
rdfs:label "altered sexual sporulation" ;
rdfs:comment "A sexual sporulation phenotype where the frequency, rate, timing, or extent of the process of forming sexual spores is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007405 , obo:OMP_0007441 .
obo:GO_0043936 a rdfs:Class ;
rdfs:label "asexual sporulation resulting in formation of a cellular spore" ;
rdfs:comment "The formation of a cellular spore derived from the products of mitosis. A cellular spore is a cell form that can be used for dissemination, for survival of adverse conditions because of its heat and dessication resistance, and/or for reproduction." ;
rdfs:subClassOf obo:GO_0030435 , obo:GO_0030436 .
obo:OMP_0007736 a rdfs:Class ;
rdfs:label "increased septation index" ;
rdfs:comment "An altered septation index phenotype where the septation index is increased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007734 .
obo:OMP_0008065 a rdfs:Class ;
rdfs:label "altered to bull's eye plaque appearance" ;
rdfs:comment "An altered bacteriophage plaque morphology phenotype where the appearance of viral plaque change from either clear or turbid to bull's eye." ;
rdfs:subClassOf obo:OMP_0008051 .
obo:OMP_0007245 a rdfs:Class ;
rdfs:label "abolished sensitivity to bacteriophage" ;
rdfs:comment "A decreased bacteriophage sensitivity phenotype where the sensitivity of a bacterial cell or cells to a bacteriophage is abolished." ;
rdfs:subClassOf obo:OMP_0007239 , obo:OMP_0007244 .
obo:OMP_0007554 a rdfs:Class ;
rdfs:label "titan cell formation phenotype" ;
rdfs:comment "A microbial phenotype relating to the formation of titan cells, which are large cells produced by fungi that typically exhibit altered capsule structure, a thickened cell wall, increased ploidy, and resistance to nitrosative and oxidative stresses." ;
rdfs:subClassOf obo:OMP_0000000 .
obo:OMP_0007776 a rdfs:Class ;
rdfs:label "decreased population growth on defined medium" ;
rdfs:comment "An altered population growth on defined medium phenotype where the rate and/or extent of growth on defined medium is decreased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007775 .
obo:OMP_0005048 a rdfs:Class ;
rdfs:label "mutation frequency phenotype" ;
rdfs:comment "A genetic material phenotype dealing with the frequency of mutations." ;
rdfs:subClassOf obo:OMP_0000290 .
obo:OMP_0000121 a rdfs:Class ;
rdfs:label "staphylococcus" ;
rdfs:comment "A cell arrangement phenotype where irregular clumps of coccus cells arise from division events in random planes." ;
rdfs:subClassOf obo:OMP_0000003 .
obo:OMP_0000049 a rdfs:Class ;
rdfs:label "presence of aerotaxis" ;
rdfs:comment "An aerotaxis phenotype where a motile microbe displays directed movement in response to environmental oxygen (O2)." ;
rdfs:subClassOf obo:OMP_0000047 .
obo:OMP_0007171 a rdfs:Class ;
rdfs:label "resistant to host defense peptide" ;
rdfs:comment "A host defense peptide resistance phenotype where a microbe is resistant to one or more antimicrobial peptides." ;
rdfs:subClassOf obo:OMP_0007881 .
obo:OMP_0007603 a rdfs:Class ;
rdfs:label "presence of DNA breaks" ;
rdfs:comment "A DNA break phenotype where breaks in chromosomal DNA occur." ;
rdfs:subClassOf obo:OMP_0007602 .
obo:OMP_0007904 a rdfs:Class ;
rdfs:label "abolished resistance to bile acids" ;
rdfs:comment "A decreased resistance to bile acids phenotype where growth and reproduction of a microbe in the presence of bile acids is abolished." ;
rdfs:subClassOf obo:OMP_0007900 , obo:OMP_0007903 .
obo:GO_0009605 a rdfs:Class ;
rdfs:label "response to external stimulus" ;
rdfs:comment "Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an external stimulus." ;
rdfs:subClassOf obo:GO_0050896 .
obo:OMP_0000011 a rdfs:Class ;
rdfs:label "absence of heterocysts" ;
rdfs:comment "A heterocyst formation phenotype where an organism does not possess the ability to differentiate into a heterocyst." ;
rdfs:subClassOf obo:OMP_0000092 .
obo:OMP_0000463 a rdfs:Class ;
rdfs:label "increased number of pili" ;
rdfs:comment "A pilus phenotype where there is an increased number of pili per cell relative to a designated control." ;
rdfs:subClassOf obo:OMP_0006010 .
obo:OMP_0007810 a rdfs:Class ;
rdfs:label "cell population growth rate phenotype" ;
rdfs:subClassOf obo:OMP_0007794 .
obo:PATO_0002324 a rdfs:Class ;
rdfs:label "offset quality" ;
rdfs:comment "The temporal relation between the end of the process with respect to a reference process." ;
rdfs:subClassOf obo:PATO_0002323 .
obo:OMP_0006174 a rdfs:Class ;
rdfs:label "altered multiple fission" ;
rdfs:comment "A multiple fission phenotype where the rate, frequency, timing, or extent of the process of multiple fission is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007068 , obo:OMP_0007144 .
obo:OMP_0006124 a rdfs:Class ;
rdfs:label "abolished mutation frequency" ;
rdfs:comment """A decreased mutation frequency phenotype where mutations no longer occur.
**This term was made obsolete because it describes a phenotype that is unlikely to occur in nature.""" .
obo:OMP_0007722 a rdfs:Class ;
rdfs:label "increased vegetative cell diameter" ;
rdfs:comment "An altered cell size phenotype observed in the vegetative growth phase of the life cycle where the diameter of a microbial cell with a circular cross-section is increased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0005108 , obo:OMP_0007713 .
obo:OMP_0007107 a rdfs:Class ;
rdfs:label "translation phenotype" ;
rdfs:comment "A gene expression phenotype that affects translation of one or more mRNAs." ;
rdfs:subClassOf obo:OMP_0000253 .
obo:OMP_0006153 a rdfs:Class ;
rdfs:label "abolished utilization of organic nitrogen" ;
rdfs:comment "An altered nitrogen source utilization phenotype where the ability to use an organic N-containing compound as the source of nitrogen is abolished." ;
rdfs:subClassOf obo:OMP_0007035 .
obo:OMP_0005276 a rdfs:Class ;
rdfs:label "decreased resistance to organic heterocyclic compound" ;
rdfs:comment "An altered organic heterocyclic compound resistance phenotype where the frequency, rate, timing, or extent of resistance to an organic heterocyclic compound is decreased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0005275 .
obo:OMP_0007166 a rdfs:Class ;
rdfs:label "altered cytokinesis" ;
rdfs:comment "A cytokinesis phenotype where the process of cytokinesis is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007148 .
obo:OMP_0006082 a rdfs:Class ;
rdfs:label "decreased decarboxylase activity" ;
rdfs:comment "An altered decarboxylase test phenotype where decarboxylase activity is decreased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0006079 .
obo:OMP_0007740 a rdfs:Class ;
rdfs:label "elongated germ tube morphology" ;
rdfs:comment "An altered germ tube morphology phenotype where the length of the germ tube is increased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007739 .
obo:OMP_0007643 a rdfs:Class ;
rdfs:label "increased population growth yield" ;
rdfs:comment "An altered population growth yield phenotype where the number of microbes produced per amount of nutrient(s) consumed is increased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007642 .
obo:OMP_0007911 a rdfs:Class ;
rdfs:label "altered resistance to a chelator" ;
rdfs:subClassOf obo:OMP_0007248 , obo:OMP_0007908 .
obo:GO_0044786 a rdfs:Class ;
rdfs:label "cell cycle DNA replication" ;
rdfs:comment "The DNA-dependent DNA replication that takes place as part of the cell cycle." ;
rdfs:subClassOf obo:GO_0006260 , obo:GO_0022402 , obo:GO_0044711 .
obo:OMP_0005343 a rdfs:Class ;
rdfs:label "organic aromatic compound resistance phenotype" ;
rdfs:comment "An antimicrobial agent resistance phenotype related to resistance or sensitivity to an organic aromatic compound." ;
rdfs:subClassOf obo:OMP_0000274 .
obo:OMP_0007193 a rdfs:Class ;
rdfs:label "altered_physical_object_quality" ;
rdfs:comment "A physical object quality that is altered relative to a designated control." ;
rdfs:subClassOf obo:PATO_0001241 .
obo:OMP_0005081 a rdfs:Class ;
rdfs:label "response to radiation stress phenotype" ;
rdfs:comment "A stress response phenotype related to resistance or sensitivity to energy in the form of electromagnetic waves at various wavelengths." ;
rdfs:subClassOf obo:OMP_0000173 .
obo:OMP_0006164 a rdfs:Class ;
rdfs:label "altered colony size phenotype" ;
rdfs:comment "An colony size phenotype where size is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0000179 , obo:OMP_0007160 .
obo:OMP_0007233 a rdfs:Class ;
rdfs:label "absence of binary fission" ;
rdfs:comment "A binary fission phenotype where an organism lacks the ability to multiply by the process of binary fission." ;
rdfs:subClassOf obo:OMP_0007067 .
obo:OMP_0000193 a rdfs:Class ;
rdfs:label "altered cell aspect ratio" ;
rdfs:comment "An altered cell shape phenotype where the cell aspect ratio (cell diameter/cell length) of a microbial cell is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0000338 , obo:OMP_0007101 .
obo:OMP_0007502 a rdfs:Class ;
rdfs:label "altered capsule morphology" ;
rdfs:comment "A capsule morphology phenotype where the size, shape, or appearance of the capsule is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0000203 .
obo:OMP_0007780 a rdfs:Class ;
rdfs:label "absence of microbial vegetative cell viability" ;
rdfs:comment "A cell phenotype in which a microbial cell in the vegetative growth phase of the life cycle is nonviable in the specified conditions." ;
rdfs:subClassOf obo:OMP_0007393 .
obo:OMP_0000135 a rdfs:Class ;
rdfs:label "akinete envelope attribute" ;
rdfs:comment "An akinete formation phenotype where the traits described are from the cells thick-walled outer membrane." ;
rdfs:subClassOf obo:OMP_0007409 .
obo:OMP_0007272 a rdfs:Class ;
rdfs:label "decreased absorption of bacteriocin" ;
rdfs:comment "An increased resistance to bacteriocin phenotype that results from decreased binding of the bacteriocin to cells." ;
rdfs:subClassOf obo:OMP_0006049 .
obo:OMP_0000027 a rdfs:Class ;
rdfs:label "flagellum morphology phenotype" ;
rdfs:comment "A cell projection morphology phenotype relating to the size, shape, or appearance of flagella, which are threadlike structures borne either singly or in groups by a motile cell, which propel the cell." ;
rdfs:subClassOf obo:OMP_0000083 .
obo:PATO_0000069 a rdfs:Class ;
rdfs:label "deviation(from_normal)" ;
rdfs:comment "A quality inhering in a bearer by virtue of the whether the bearer differs from normal or average." ;
rdfs:subClassOf obo:PATO_0000068 .
obo:OMP_0000165 a rdfs:Class ;
rdfs:label "increased colony size" ;
rdfs:comment "A colony size phenotype where colony size is increased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0006164 .
obo:OMP_0007379 a rdfs:Class ;
rdfs:label "pyrimidine requirement" ;
rdfs:comment "A requires growth factor(s) phenotype where the required growth factor is a pyrimidine base." ;
rdfs:subClassOf obo:OMP_0007069 .
obo:GO_0006412 a rdfs:Class ;
rdfs:label "translation" ;
rdfs:comment "The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA. Translation ends with the release of a polypeptide chain from the ribosome." ;
rdfs:subClassOf obo:GO_0034645 , obo:GO_0044267 .
obo:OMP_0000362 a rdfs:Class ;
rdfs:label "cell surface area variability phenotype" ;
rdfs:subClassOf obo:OMP_0007917 .
obo:OMP_0007285 a rdfs:Class ;
rdfs:label "laccase activity phenotype" ;
rdfs:comment "A catalytic activity phenotype that relates to the presence or absence of laccase, a family of oxidoreductases that act on diphenols and related substances as donors and use oxygen as the acceptor." ;
rdfs:subClassOf obo:OMP_0000221 , obo:OMP_0007130 .
obo:OMP_0006005 a rdfs:Class ;
rdfs:label "altered site-specific recombination" ;
rdfs:comment "A site specific recombination phenotype where the frequency, rate, timing, or extent of site-specific recombination is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0005043 .
obo:OMP_0007893 a rdfs:Class ;
rdfs:label "not resistant to a surfactant" ;
rdfs:comment "A surfactant resistance phenotype where growth and reproduction of a microbe doesn't occur in the presence of a surfactant." ;
rdfs:subClassOf obo:OMP_0007891 .
obo:OMP_0007095 a rdfs:Class ;
rdfs:label "increased motility by gliding" ;
rdfs:comment "An increased motility phenotype where the frequency, rate, timing, or extent of motility by gliding is increased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0000045 , obo:OMP_0007492 .
obo:OMP_0000182 a rdfs:Class ;
rdfs:label "gas production test" ;
rdfs:comment "A differential test phenotype that describes ability of an organism to produce a gas, such as CO2, as the result of metabolic activities during growth." ;
rdfs:subClassOf obo:OMP_0007130 .
obo:OMP_0000452 a rdfs:Class ;
rdfs:label "increased heme utilization" ;
rdfs:comment "An altered heme utilization phenotype where the ability to utilize heme is increased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007088 .
obo:OMP_0007405 a rdfs:Class ;
rdfs:label "sexual sporulation phenotype" ;
rdfs:comment "A sporulation phenotype related to the formation of spores derived from the products of meiosis." ;
rdfs:subClassOf obo:OMP_0000091 , obo:OMP_0007406 .
obo:OMP_0008023 a rdfs:Class ;
rdfs:label "endospore formation stopped at stage VI" ;
rdfs:comment "An interrupted endospore formation phenotype where endospore formation and maturation is complete, but before lysis of the mother cell." ;
rdfs:subClassOf obo:OMP_0008018 .
obo:OMP_0000276 a rdfs:Class ;
rdfs:label "increased cell perimeter" ;
rdfs:subClassOf obo:OMP_0000273 .
obo:OMP_0000038 a rdfs:Class ;
rdfs:label "increased cell surface area-to-volume ratio variability" ;
rdfs:subClassOf obo:OMP_0000025 .
obo:OMP_0000288 a rdfs:Class ;
rdfs:label "decreased fraction of non-constricted cells" ;
rdfs:subClassOf obo:OMP_0000287 .
obo:OMP_0005182 a rdfs:Class ;
rdfs:label "actin cytoskeleton morphology phenotype" ;
rdfs:comment "A subcellular component phenotype relating to the size, shape, or structure of the actin cytoskeleton of a microbial cell." ;
rdfs:subClassOf obo:OMP_0007758 .
obo:OMP_0006125 a rdfs:Class ;
rdfs:label "abolished myxospore formation" ;
rdfs:comment "A decreased myxospore formation phenotype where the rate, frequency, timing, or extent of myxospore formation is abolished." ;
rdfs:subClassOf obo:OMP_0000021 , obo:OMP_0000022 .
obo:OMP_0007219 a rdfs:Class ;
rdfs:label "decreased resistance to rifamycin" ;
rdfs:comment "An altered rifamycin resistance phenotype where resistance to one or more rifamycins is decreased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007216 .
obo:OMP_0007208 a rdfs:Class ;
rdfs:label "increased resistance to UV-C" ;
rdfs:comment "An increased UV-radiation resistance phenotype where the resistance of microbes in a population to UV-C radiation (typically, 100-280 nm) is increased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0005097 .
obo:OMP_0005373 a rdfs:Class ;
rdfs:label "sporulation frequency phenotype" ;
rdfs:comment "A cell population phenotype relating to the fraction of cells in a population that form spores under sporulation-inducing conditions." ;
rdfs:subClassOf obo:OMP_0000091 , obo:OMP_0007006 .
obo:OMP_0007312 a rdfs:Class ;
rdfs:label "altered apoptosis" ;
rdfs:comment "An apoptosis phenotype where the occurrence of apoptosis is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007309 , obo:OMP_0007341 .
obo:OMP_0006113 a rdfs:Class ;
rdfs:label "abolished homologous recombination" ;
rdfs:comment "A decreased frequency of homologous recombination phenotype where the ability to perform homologous recombination is abolished." ;
rdfs:subClassOf obo:OMP_0005050 , obo:OMP_0005052 .
obo:PATO_0001710 a rdfs:Class ;
rdfs:label "3-D extent" ;
rdfs:comment "A size quality inhering in an bearer by virtue of the bearer's extension in three dimensions." ;
rdfs:subClassOf obo:PATO_0000117 .
obo:OMP_0005052 a rdfs:Class ;
rdfs:label "absence of homologous recombination" ;
rdfs:comment "A homologous recombination phenotype a cell or cells lack the ability to perform homologous recombination." ;
rdfs:subClassOf obo:OMP_0005042 .
obo:OMP_0007296 a rdfs:Class ;
rdfs:label "absence of diazonium blue B staining" ;
rdfs:comment "A diazonium blue B staining phenotype where cells appear yellow or brown after staining with diazonium blue B." ;
rdfs:subClassOf obo:OMP_0007294 .
obo:OMP_0007759 a rdfs:Class ;
rdfs:label "microtubule cytoskeleton phenotype" ;
rdfs:comment "A subcellular component phenotype relating to the amount, distribution, composition, or morphology of the microtubule cytoskeleton of a microbial cell." ;
rdfs:subClassOf obo:OMP_0007754 .
obo:OMP_0007398 a rdfs:Class ;
rdfs:label "decreased lethality" ;
rdfs:comment "An altered lethality phenotype where the ability of an infectious microbe to cause death of the host is decreased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007397 .
obo:OMP_0006064 a rdfs:Class ;
rdfs:label "not resistant to tetracycline" ;
rdfs:comment "A tetracycline compound resistance phenotype where an organism or cell is sensitive to one or more tetracyclines." ;
rdfs:subClassOf obo:OMP_0006062 .
obo:OMP_0007632 a rdfs:Class ;
rdfs:label "cell phenotype" ;
rdfs:comment "A microbial phenotype that is observed at the level of an individual cell." ;
rdfs:subClassOf obo:OMP_0000000 .
obo:OMP_0007416 a rdfs:Class ;
rdfs:label "altered conjugation" ;
rdfs:comment "A conjugation phenotype where the frequency, rate, timing, or extent of conjugation is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007413 .
obo:GO_0044267 a rdfs:Class ;
rdfs:label "cellular protein metabolic process" ;
rdfs:comment "The chemical reactions and pathways involving a specific protein, rather than of proteins in general, occurring at the level of an individual cell. Includes cellular protein modification." ;
rdfs:subClassOf obo:GO_0019538 , obo:GO_0044260 .
obo:PATO_0001355 a rdfs:Class ;
rdfs:label "convex" ;
rdfs:comment "A shape quality that obtains by virtue of the bearer having inward facing edges; having a surface or boundary that curves or bulges outward, as the exterior of a sphere." ;
rdfs:subClassOf obo:PATO_0002005 .
obo:OMP_0005055 a rdfs:Class ;
rdfs:label "increased frequency of site-specific recombination" ;
rdfs:comment "A site specific recombination phenotype where the prevalence of site specific recombination is increased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0006005 .
obo:OMP_0000207 a rdfs:Class ;
rdfs:label "serotype phenotype" ;
rdfs:comment "A microbial phenotype that is distinguished by the presence a specific surface antigen." ;
rdfs:subClassOf obo:OMP_0000000 .
obo:GO_0043158 a rdfs:Class ;
rdfs:label "heterocyst differentiation" ;
rdfs:comment "The process in which a relatively unspecialized cell acquires specialized features of a heterocyst, a differentiated cell in certain cyanobacteria whose purpose is to fix nitrogen." ;
rdfs:subClassOf obo:GO_0030154 .
obo:OMP_0007177 a rdfs:Class ;
rdfs:label "altered aerobic respiration" ;
rdfs:comment "An aerobic respiration phenotype that is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0000216 .
obo:PATO_0001552 a rdfs:Class ;
rdfs:label "decreased sensitivity of a process" ;
rdfs:comment "A sensitivity of a process which is lower than normal or average." ;
rdfs:subClassOf obo:PATO_0001457 , obo:PATO_0002302 .
obo:OMP_0007799 a rdfs:Class ;
rdfs:label "decreased vegetative cell population growth at high temperature" ;
rdfs:comment "A cell population phenotype observed in the vegetative growth phase of the life cycle where the rate and/or extent of growth of a population of microbial cells at a temperature above the optimal growth temperature of the microbe is decreased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007798 .
obo:OMP_0006034 a rdfs:Class ;
rdfs:label "altered stress-induced mutagenesis" ;
rdfs:comment "A stress-induced mutagenesis phenotype where the frequency, rate, timing, or extent of stress-induced mutagenesis is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0005027 .
obo:OMP_0006106 a rdfs:Class ;
rdfs:label "altered antimicrobial peptide production" ;
rdfs:comment "An antimicrobial peptide production phenotype where the production of an antimicrobial peptide is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0006105 .
obo:OMP_0008063 a rdfs:Class ;
rdfs:label "altered to fuzzy edge plaque appearance" ;
rdfs:comment "An altered bacteriophage plaque morphology phenotype where the appearance of viral plaque edge becomes fuzzy relative to a designated control." ;
rdfs:subClassOf obo:OMP_0008051 .
obo:OMP_0007069 a rdfs:Class ;
rdfs:label "requires growth factor(s)" ;
rdfs:comment "A growth factor requirement phenotype where a microorganism is unable to synthesize an organic compound that is required for growth and reproduction. The required growth factor must be added to the growth medium." ;
rdfs:subClassOf obo:OMP_0007044 .
obo:OMP_0000334 a rdfs:Class ;
rdfs:label "increased resistance to aminopyrimidine" ;
rdfs:comment "An aminopyrimidine resistance phenotype where resistance is increased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0006018 .
obo:OMP_0007338 a rdfs:Class ;
rdfs:label "abolished autophagic vesicle formation" ;
rdfs:comment "A decreased autophagic vesicle formation phenotype where autophagic vesicle formation is abolished." ;
rdfs:subClassOf obo:OMP_0007337 .
obo:OMP_0007270 a rdfs:Class ;
rdfs:label "abolished drug-dependence of population growth" ;
rdfs:comment "A decreased drug-dependent population growth phenotype where dependence of reproduction on the presence of a drug in the growth medium is abolished." ;
rdfs:subClassOf obo:OMP_0007266 , obo:OMP_0007269 .
obo:GO_0042995 a rdfs:Class ;
rdfs:label "cell projection" ;
rdfs:comment "A prolongation or process extending from a cell, e.g. a flagellum or axon." ;
rdfs:subClassOf obo:GO_0044464 .
obo:OMP_0007160 a rdfs:Class ;
rdfs:label "altered colony morphology" ;
rdfs:comment "A colony morphology phenotype where the morphology of a colony or colonies is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0000100 , obo:OMP_0007085 , obo:OMP_0007470 .
obo:OMP_0007642 a rdfs:Class ;
rdfs:label "altered population growth yield" ;
rdfs:comment "A population growth yield phenotype where the number of microbes produced per amount of nutrient(s) consumed is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007641 .
obo:OMP_0007659 a rdfs:Class ;
rdfs:label "absence of cellular reactive oxygen species" ;
rdfs:subClassOf obo:OMP_0007657 .
obo:OMP_0005033 a rdfs:Class ;
rdfs:label "absence of stress-induced mutagenesis" ;
rdfs:comment "A stress-induced mutagenesis phenotype where a cell or cells don't exhibit stress-induced mutagenesis." ;
rdfs:subClassOf obo:OMP_0005027 .
obo:OMP_0007385 a rdfs:Class ;
rdfs:label "decreased resistance benzamides" ;
rdfs:comment "An altered benzamides resistance phenotype where the resistance of an organism, cell, or cells to a benzamide is decreased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007383 .
obo:OMP_0007368 a rdfs:Class ;
rdfs:label "altered resistance to an acridine" ;
rdfs:comment "An acridine resistance phenotype where resistance of an organism, cell, or cells to an acridine is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007134 , obo:OMP_0007365 .
obo:OMP_0007349 a rdfs:Class ;
rdfs:label "decreased protein secretion" ;
rdfs:comment "An altered protein secretion phenotype where the frequency, rate, timing or extent of the process of protein secretion is decreased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007347 .
obo:OMP_0000124 a rdfs:Class ;
rdfs:label "spirillum" ;
rdfs:comment "A spiral cell shape phenotype where a cell forms a rigid spiral." ;
rdfs:subClassOf obo:OMP_0000086 .
obo:OMP_0000080 a rdfs:Class ;
rdfs:label "amphitrichous" ;
rdfs:comment "A flagellum distribution phenotype where an organism has a single flagellum at each end of the cell." ;
rdfs:subClassOf obo:OMP_0000078 .
obo:OMP_0007471 a rdfs:Class ;
rdfs:label "increased ascospore formation" ;
rdfs:comment "An altered ascospore formation phenotype where the frequency, rate, timing, or extent of formation of ascospores is increased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007408 , obo:OMP_0007436 .
obo:OMP_0007308 a rdfs:Class ;
rdfs:label "cell death phenotype" ;
rdfs:comment "A biological process phenotype that relates to the cessation of life of an individual cell." ;
rdfs:subClassOf obo:OMP_0007332 .
obo:OMP_0005160 a rdfs:Class ;
rdfs:label "phosphatase activity phenotype" ;
rdfs:comment "An enzymatic activity phenotype that relates to the presence or absence of phosphatase, an enzyme that acts to modulate protein activity in cells. Phosphatase acts by removing phosphate groups off of active proteins making them enzymatically inactive." ;
rdfs:subClassOf obo:OMP_0000221 .
obo:OMP_0008052 a rdfs:Class ;
rdfs:label "more turbid plaque appearance" ;
rdfs:comment "An altered bacteriophage plaque morphology phenotype where the appearance of a viral plaque is more turbid than a designated control." ;
rdfs:subClassOf obo:OMP_0008051 .
obo:OMP_0007614 a rdfs:Class ;
rdfs:label "increased frequency of double-strand DNA breaks" ;
rdfs:comment "An increased frequency of DNA breaks phenotype where the frequency of double-strand breaks in chromosomal DNA is increased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007606 .
obo:OMP_0007043 a rdfs:Class ;
rdfs:label "phosphorus source utilization phenotype" ;
rdfs:comment "A nutrient utilization phenotype where the nutrient is being used as a source of phosphorus." ;
rdfs:subClassOf obo:OMP_0006022 .
obo:OMP_0000074 a rdfs:Class ;
rdfs:label "cell size phenotype" ;
rdfs:comment "A cell morphology phenotype where the trait in question is the size of a cell." ;
rdfs:subClassOf obo:OMP_0000071 .
obo:OMP_0005287 a rdfs:Class ;
rdfs:label "abolished colonization of host tissue" ;
rdfs:comment "A decreased colonization of host tissue phenotype where colonization of a host tissue is abolished." ;
rdfs:subClassOf obo:OMP_0005283 , obo:OMP_0005286 .
obo:OMP_0000377 a rdfs:Class ;
rdfs:label "absence of acid tolerance response" ;
rdfs:subClassOf obo:OMP_0000376 .
obo:OMP_0008037 a rdfs:Class ;
rdfs:label "altered natural competence" ;
rdfs:comment "A natural competence phenotype where the rate, frequency, timing, or extent of natural competence is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007085 , obo:OMP_0008035 .
obo:PATO_0000461 a rdfs:Class ;
rdfs:label "normal" ;
rdfs:comment "A quality inhering in a bearer by virtue of the bearer's exhibiting no deviation from normal or average." ;
rdfs:subClassOf obo:PATO_0000069 .
obo:OMP_0005137 a rdfs:Class ;
rdfs:label "increased septation" ;
rdfs:comment "An altered septation phenotype where formation of new cell septa is increased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007165 .
obo:OMP_0008017 a rdfs:Class ;
rdfs:label "endospore formation stopped at stage 0" ;
rdfs:comment "An interrupted endospore formation phenotype where sporulation is stopped before any visible morphological changes have occurred, and the cell or cells have the appearance of vegetative cells." ;
rdfs:subClassOf obo:OMP_0008018 .
obo:OMP_0007733 a rdfs:Class ;
rdfs:label "presence of a septation index" ;
rdfs:subClassOf obo:OMP_0007732 .
obo:PATO_0001564 a rdfs:Class ;
rdfs:label "extra or missing processual parts" ;
rdfs:comment "A quality of a process inhering in a bearer by virtue of the bearer's processual parts." ;
rdfs:subClassOf obo:PATO_0001236 .
obo:GO_0044249 a rdfs:Class ;
rdfs:label "cellular biosynthetic process" ;
rdfs:comment "The chemical reactions and pathways resulting in the formation of substances, carried out by individual cells." ;
rdfs:subClassOf obo:GO_0009058 , obo:GO_0044237 .
obo:OMP_0005291 a rdfs:Class ;
rdfs:label "altered colonization of tissue in an immunocompromised host" ;
rdfs:comment "A colonization of tissue in an immunocompromised host phenotype where the frequency rate, timing, or extent of colonization of tissue of an immunocompromised host is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0005288 .
obo:PATO_0002002 a rdfs:Class ;
rdfs:label "has extra parts of type" ;
rdfs:comment "The bearer of this quality has_part > n of the indicated entity type, where n is the normal amount for a comparable organism. Note that the bearer of the quality is the whole, not the part." ;
rdfs:subClassOf obo:PATO_0002083 , obo:PATO_0002305 .
obo:OMP_0006114 a rdfs:Class ;
rdfs:label "abolished site-specific recombination" ;
rdfs:comment "A decreased frequency of site-specific recombination phenotype where the ability to perform site-specific recombination is abolished." ;
rdfs:subClassOf obo:OMP_0005056 , obo:OMP_0005057 .
obo:OMP_0006128 a rdfs:Class ;
rdfs:label "abolished positive DNA supercoiling" ;
rdfs:comment "A decreased positive DNA supercoiling phenotype where the ability to form positive supercoils in DNA is abolished." ;
rdfs:subClassOf obo:OMP_0006130 , obo:OMP_0007002 .
obo:OMP_0007319 a rdfs:Class ;
rdfs:label "mucoid colony surface phenotype" ;
rdfs:comment "A colony surface phenotype that is characterized by a surface with a viscous, slimy, or gummy appearance, typically due to the presence of extracellular polysaccharides produced by cells in the colony." ;
rdfs:subClassOf obo:OMP_0000210 .
obo:OMP_0007995 a rdfs:Class ;
rdfs:label "increased cell surface area" ;
rdfs:subClassOf obo:OMP_0007993 .
obo:OMP_0007654 a rdfs:Class ;
rdfs:label "decreased resistance to mitomycin" ;
rdfs:comment "An altered resistance to mitomycin phenotype where resistance to a mitomycin is decreased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007652 .
obo:PATO_0001999 a rdfs:Class ;
rdfs:label "lacks parts or has fewer parts of type" ;
rdfs:comment "The bearer of this quality has_part < n of the indicated entity type, where n is the normal amount for a comparable organism. Note that the bearer of the quality is the whole, not the part. Formally: If a bearer entity e has fewer parts of type X at time t, then the number of instances x of X at t such that x part_of e is < n, where n is either the normal number for comparable entities, or n is stated explicitly. This case includes the limit case, where the bearer lacks all parts of the specified type." ;
rdfs:subClassOf obo:PATO_0002083 .
obo:GO_0019222 a rdfs:Class ;
rdfs:label "regulation of metabolic process" ;
rdfs:comment "Any process that modulates the frequency, rate or extent of the chemical reactions and pathways within a cell or an organism." ;
rdfs:subClassOf obo:GO_0050789 .
obo:OMP_0005070 a rdfs:Class ;
rdfs:label "increased mitotic recombination" ;
rdfs:comment "An altered mitotic recombination phenotype where the mitotic recombination is increased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0005044 .
obo:OMP_0007870 a rdfs:Class ;
rdfs:label "presence of resistance to A22" ;
rdfs:comment "This term and was deemed to be too granular. In its place, use OMP:0007876 resistant to an antimicrobial agent and enter database identifier for A22 in the Annotation Extension field." .
obo:OMP_0000000 a rdfs:Class ;
rdfs:label "microbial phenotype" ;
rdfs:comment "The observable manifestation of the genotype of a microbial cell or group of cells in an environment." .
obo:PATO_0002305 a rdfs:Class ;
rdfs:label "increased object quality" ;
rdfs:comment "A quality of an object that has a value that is increased compared to normal or average." ;
rdfs:subClassOf obo:PATO_0001241 , obo:PATO_0002300 .
obo:PATO_0000912 a rdfs:Class ;
rdfs:label "increased rate" ;
rdfs:comment "A rate which is relatively high." ;
rdfs:subClassOf obo:PATO_0000161 , obo:PATO_0002304 .
obo:OMP_0000221 a rdfs:Class ;
rdfs:label "enzymatic activity phenotype" ;
rdfs:comment "A microbial phenotype that affects an enzymatic activity. Enzymes are biological molecules that catalyze biochemical reactions at physiological temperatures. Enzymes possess specific binding sites for their substrates (reactants) and are usually composed wholly or largely of protein or RNA. Catalytic RNAs are also called ribozymes." ;
rdfs:subClassOf obo:OMP_0000000 .
obo:OMP_0000086 a rdfs:Class ;
rdfs:label "spiral cell shape" ;
rdfs:comment "A cell shape phenotype where a cell is helical or cork-screw shaped." ;
rdfs:subClassOf obo:OMP_0000073 .
obo:OMP_0005384 a rdfs:Class ;
rdfs:label "presence of short tail" ;
rdfs:comment "A tail length phenotype where the maximum length of the tail is 17 nm." ;
rdfs:subClassOf obo:OMP_0005383 .
obo:OMP_0007084 a rdfs:Class ;
rdfs:label "decreased cell length" ;
rdfs:comment "An altered cell size phenotype where the long axis of a cell or cells is decreased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0000040 , obo:OMP_0007975 .
obo:OMP_0005332 a rdfs:Class ;
rdfs:label "protein localization phenotype" ;
rdfs:comment "A cellular component phenotype relating to the localization or placement of proteins within a cell." ;
rdfs:subClassOf obo:OMP_0007197 .
obo:OMP_0005317 a rdfs:Class ;
rdfs:label "presence of colonization of tissue in an immunocompromised rabbit" ;
rdfs:comment "A colonization of tissue in an immunocompromised rabbit phenotype where a microbe is able to colonize tissue of an immunocompromised rabbit." ;
rdfs:subClassOf obo:OMP_0005316 .
obo:OMP_0000063 a rdfs:Class ;
rdfs:label "absence of quorum sensing" ;
rdfs:comment "A quorum sensing phenotype where an organism does not possess the ability to monitor its population density by detecting the concentration of small, diffusible signal molecules." ;
rdfs:subClassOf obo:OMP_0000069 .
obo:OMP_0007156 a rdfs:Class ;
rdfs:label "population growth rate phenotype" ;
rdfs:comment "A population growth phenotype concerning the rate at which a microbial population multiplies over time." ;
rdfs:subClassOf obo:OMP_0007167 .
obo:OMP_0007621 a rdfs:Class ;
rdfs:label "increased frequency of Holliday junction structures" ;
rdfs:comment "An altered frequency of Holliday junction phenotype where the frequency of Holliday junction structures in chromosomal DNA is increased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007620 .
obo:PATO_0000161 a rdfs:Class ;
rdfs:label "rate" ;
rdfs:comment "A quality of a single process inhering in a bearer by virtue of the bearer's occurrence per unit time." ;
rdfs:subClassOf obo:PATO_0002062 .
obo:OMP_0000388 a rdfs:Class ;
rdfs:label "decreased cell-cell self recognition" ;
rdfs:subClassOf obo:OMP_0000386 .
obo:OMP_0007121 a rdfs:Class ;
rdfs:label "increased transcription of sigma-factor dependent genes" ;
rdfs:comment "An increased transcription phenotype where transcription of a gene or genes dependent upon a particular sigma factor is increased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007117 .
obo:OMP_0000269 a rdfs:Class ;
rdfs:label "protein activity phenotype" ;
rdfs:comment "A microbial phenotype related to the enzymatic or other activity of a protein." .
obo:OMP_0007184 a rdfs:Class ;
rdfs:label "increased anaerobic respiration" ;
rdfs:comment "An altered anaerobic respiration phenotype where the ability to perform anaerobic respiration is increased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007183 .
obo:OMP_0000171 a rdfs:Class ;
rdfs:label "microaerophile" ;
rdfs:comment """An oxygen growth range phenotype where growth and reproduction requires oxygen but at levels below that found in air (approx. 21%).
A microbial phenotype that describes a microorganism that requires O2 for growth, but doesn't grow in the presence of atmospheric levels of O2. Optimal growth of a microaerophile occurs in environments with xx% - xx% O2.""" ;
rdfs:subClassOf obo:OMP_0007928 .
obo:OMP_0007648 a rdfs:Class ;
rdfs:label "presence of an attached lifestyle" ;
rdfs:comment """An attached lifestyle phenotype where a microbe typically grows and reproduces while physically attached to a
is the summative outcome of multiple phenotypes that, acting together, typically provide a microbe some advantage while competing for niche space while it is physically anchored to some portion of solid material.
May include the expression of pili or other structures used for attachment, antibiotic compounds, extracellular matrix remodelling proteins, and the like.""" ;
rdfs:subClassOf obo:OMP_0007647 .
obo:OMP_0007748 a rdfs:Class ;
rdfs:label "cellular physical quality phenotype during vegetative growth" ;
rdfs:comment "A phenotype related to any physical object quality, such as morphology, number, location, etc., of a microbial cell or a cellular component in the vegetative growth phase of the life cycle." ;
rdfs:subClassOf obo:OMP_0007633 .
obo:OMP_0006131 a rdfs:Class ;
rdfs:label "abolished flagella" ;
rdfs:comment "A decreased number of flagella phenotype where the number of flagella per cell is decreased to zero." ;
rdfs:subClassOf obo:OMP_0000030 , obo:OMP_0000215 .
obo:OMP_0005354 a rdfs:Class ;
rdfs:label "decreased mating" ;
rdfs:comment "An altered mating phenotype where the frequency, rate, timing, or extent of sexual reproduction by conjugation is decreased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0005352 .
obo:OMP_0006146 a rdfs:Class ;
rdfs:label "abolished resistance to quinolone" ;
rdfs:comment "A decreased resistance to quinolone phenotype where resistance to a quinolone is abolished." ;
rdfs:subClassOf obo:OMP_0006040 , obo:OMP_0006042 .
obo:OMP_0007446 a rdfs:Class ;
rdfs:label "decreased lethality in mice" ;
rdfs:comment "A decreased lethality phenotype where the ability of an infectious microbe to cause death of its murine host is decreased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007398 .
obo:OMP_0005167 a rdfs:Class ;
rdfs:label "absence of superoxide dismutase activity" ;
rdfs:comment "A superoxide dismutase phenotype where an organism does not exhibit superoxide dismutase activity." ;
rdfs:subClassOf obo:OMP_0005166 .
obo:OMP_0005063 a rdfs:Class ;
rdfs:label "decreased phospholipase activity" ;
rdfs:comment "An altered phospholipase activity phenotype where phospholipase activity is decreased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0005028 .
obo:OMP_0000294 a rdfs:Class ;
rdfs:label "DNA supercoiling phenotype" ;
rdfs:comment "A genetic material phenotype related to supercoiling of a double-stranded DNA molecule." ;
rdfs:subClassOf obo:OMP_0000290 .
obo:OMP_0007054 a rdfs:Class ;
rdfs:label "increased negative chemotaxis" ;
rdfs:comment "An increased chemotaxis phenotype where the frequency, rate, timing, or extent of negative chemotaxis by a motile microbe is increased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0000505 .
obo:OMP_0000340 a rdfs:Class ;
rdfs:label "presence of cell division ratio variability" ;
rdfs:subClassOf obo:OMP_0007698 .
obo:OMP_0000309 a rdfs:Class ;
rdfs:label "biosynthetic phenotype" ;
rdfs:comment "A metabolic phenotype dealing with the chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones." ;
rdfs:subClassOf obo:OMP_0000180 .
obo:OMP_0005171 a rdfs:Class ;
rdfs:label "presence of superoxide dismutase activity" ;
rdfs:comment "A superoxide dismutase phenotype where an organism exhibits superoxide dismutase activity." ;
rdfs:subClassOf obo:OMP_0005166 .
obo:OMP_0007708 a rdfs:Class ;
rdfs:label "altered vegetative cell shape" ;
rdfs:comment "An altered cell shape phenotype where the shape of a cell in the vegetative growth phase of the life cycle is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007101 , obo:OMP_0007715 .
obo:OMP_0005365 a rdfs:Class ;
rdfs:label "presence of negative osmotaxis" ;
rdfs:comment "A presence of osmotaxis phenotype where a motile microbe displays osmotaxis away from a higher osmotic concentration." ;
rdfs:subClassOf obo:OMP_0005362 .
obo:GO_0090304 a rdfs:Class ;
rdfs:label "nucleic acid metabolic process" ;
rdfs:comment "Any cellular metabolic process involving nucleic acids." ;
rdfs:subClassOf obo:GO_0006139 , obo:GO_0043170 .
obo:OMP_0007788 a rdfs:Class ;
rdfs:label "altered cell separation after cell division during vegetative growth" ;
rdfs:comment "A cellular process phenotype observed during vegetative growth where the rate, frequency, timing, or extent of cell separation after cell division is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007784 .
obo:OMP_0008012 a rdfs:Class ;
rdfs:label "presence of an outer endospore membrane" ;
rdfs:comment "An outer endospore membrane phenotype where an endospore has an outer membrane." ;
rdfs:subClassOf obo:OMP_0008010 .
obo:OMP_0007464 a rdfs:Class ;
rdfs:label "absence of flocculation" ;
rdfs:comment "A flocculation phenotype where cells or organisms in liquid culture do not aggregate to form clumps of many cells." ;
rdfs:subClassOf obo:OMP_0000178 .
obo:OMP_0007251 a rdfs:Class ;
rdfs:label "abolished chemical sensitivity" ;
rdfs:comment "An altered chemical sensitivity phenotype where the sensitivity of a cell, cells, or microbe to a chemical is abolished." .
obo:OMP_0006093 a rdfs:Class ;
rdfs:label "altered quorum sensing phenotype" ;
rdfs:comment "A quorum sensing phenotype where the frequency, rate, timing, or extent of quorum sensing is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0000069 .
obo:OMP_0007132 a rdfs:Class ;
rdfs:label "decreased flagellum length" ;
rdfs:comment "An altered flagellum length phenotype where the length of the flagellum is shorter than a designated control." ;
rdfs:subClassOf obo:OMP_0000024 .
obo:OMP_0005306 a rdfs:Class ;
rdfs:label "increased colonization of tissue in an immunocompromised mouse" ;
rdfs:comment "An altered colonization of tissue in an immunocompromised mouse phenotype where the frequency, rate, timing, or extent of colonization is increased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0005305 .
obo:OMP_0007653 a rdfs:Class ;
rdfs:label "increased resistance to mitomycin" ;
rdfs:comment "An altered resistance to mitomycin phenotype where resistance to a mitomycin is increased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007652 .
obo:OMP_0007006 a rdfs:Class ;
rdfs:label "population phenotype" ;
rdfs:comment "A microbial phenotype where the phenotype is observed at the level of a microbial population." ;
rdfs:subClassOf obo:OMP_0000000 .
obo:OMP_0005086 a rdfs:Class ;
rdfs:label "resistance to x-ray radiation" ;
rdfs:comment "A resistance to radiation stress phenotype related to the resistance or sensitivity that microbes in a population show when exposed to x-rays." ;
rdfs:subClassOf obo:OMP_0007576 .
obo:OMP_0007575 a rdfs:Class ;
rdfs:label "resistance to dessication stress phenotype" ;
rdfs:comment "A resistance to stress phenotype related to the resistance or sensitivity that microbes in a population show when exposed to dessication stress." ;
rdfs:subClassOf obo:OMP_0007568 .
obo:OMP_0007719 a rdfs:Class ;
rdfs:label "decreased cell volume" ;
rdfs:comment "An altered cell size phenotype in which the volume of the cell is decreased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0000040 .
obo:OMP_0007990 a rdfs:Class ;
rdfs:label "altered cell volume variability" ;
rdfs:subClassOf obo:OMP_0007989 .
obo:OMP_0000005 a rdfs:Class ;
rdfs:label "presence of motility" ;
rdfs:comment "A motility phenotype where a microbe possesses the ability to perform controlled self-propelled movement that results in translocation from one place to another." ;
rdfs:subClassOf obo:OMP_0000001 .
obo:PATO_0001578 a rdfs:Class ;
rdfs:label "decreased permeability" ;
rdfs:comment "A permeability which is relatively low." ;
rdfs:subClassOf obo:PATO_0000982 , obo:PATO_0002303 .
obo:OMP_0000283 a rdfs:Class ;
rdfs:label "increased population growth rate" ;
rdfs:comment "An altered growth rate phenotype where the rate at which a microbial population multiplies is increased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007115 .
obo:OMP_0008039 a rdfs:Class ;
rdfs:label "decreased natural competence" ;
rdfs:comment "An altered natural competence phenotype where the where the rate, frequency, timing, or extent of natural competence is decreased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0008037 .
obo:OMP_0007984 a rdfs:Class ;
rdfs:label "altered cell area variability" ;
rdfs:subClassOf obo:OMP_0007918 , obo:OMP_0007983 .
obo:OMP_0007027 a rdfs:Class ;
rdfs:label "increased quorum sensing" ;
rdfs:comment "A quorum sensing phenotype where organisms ability to monitor their population density is increased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0006093 .
obo:OMP_0007162 a rdfs:Class ;
rdfs:label "gene expression regulation phenotype" ;
rdfs:comment "A regulation phenotype that affects the regulation of gene expression. Regulation can occur at the level transcription, translation, or turnover." ;
rdfs:subClassOf obo:OMP_0007161 .
obo:OMP_0000310 a rdfs:Class ;
rdfs:label "small molecule biosynthesis phenotype" ;
rdfs:comment "A biosynthetic phenotype dealing with the chemical reactions and pathways resulting in the formation of small molecules, any low molecular weight, monomeric, non-encoded molecule." ;
rdfs:subClassOf obo:OMP_0000309 .
obo:OMP_0007676 a rdfs:Class ;
rdfs:label "presence of transporter activity" ;
rdfs:comment "A transporter activity phenotype where a microbe has a specified transporter activity that translocates its substrate at some observed rate." ;
rdfs:subClassOf obo:OMP_0007675 .
obo:OMP_0007173 a rdfs:Class ;
rdfs:label "decreased resistance to host defense peptides" ;
rdfs:comment "An altered host defense peptide resistance phenotype where resistance to is decreased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007170 .
obo:OMP_0007827 a rdfs:Class ;
rdfs:label "increased resistance to nitrofuran" ;
rdfs:comment "An altered nitrofuran resistance phenotype where resistance to a nitrofuran compound is increased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007824 .
obo:OMP_0007327 a rdfs:Class ;
rdfs:label "bud morphology phenotype" ;
rdfs:comment "A cell morphology phenotype relating to the size, shape, or appearance of a bud, a protuberance from a cell of an organism that reproduces by budding." ;
rdfs:subClassOf obo:OMP_0000071 .
obo:OMP_0000022 a rdfs:Class ;
rdfs:label "decreased myxospore formation" ;
rdfs:comment "An altered myxospore formation phenotype where the rate, frequency, timing, or extent of myxospore formation is decreased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0006009 .
obo:OMP_0000146 a rdfs:Class ;
rdfs:label "midcell nucleoid localization" ;
rdfs:comment "A nucleoid localization phenotype where the nucleoid is localized at the center of the cell." ;
rdfs:subClassOf obo:OMP_0000145 .
obo:OMP_0000503 a rdfs:Class ;
rdfs:label "decreased chemotaxis" ;
rdfs:comment "An altered chemotaxis phenotype where the frequency, rate, timing, or extent of chemotaxis by a motile microbe is decreased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007077 .
obo:OMP_0007215 a rdfs:Class ;
rdfs:label "rifamycin resistance phenotype" ;
rdfs:comment "An antimicrobial agent resistance phenotype related to resistance or sensitivity to one or more rifamycin compounds." ;
rdfs:subClassOf obo:OMP_0000274 .
obo:OMP_0006051 a rdfs:Class ;
rdfs:label "resistant to bacteriocin" ;
rdfs:comment "A bacteriocin resistance phenotype where an organism or cell is resistant to one or more bacteriocins." ;
rdfs:subClassOf obo:OMP_0006027 .
obo:OMP_0006001 a rdfs:Class ;
rdfs:label "altered chromosome segregation" ;
rdfs:comment "A chromosome segregation phenotype where the frequency, rate, timing, or extent of chromosome segregation is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0005047 , obo:OMP_0007351 .
obo:OMP_0007726 a rdfs:Class ;
rdfs:label "abolished spore viability" ;
rdfs:comment "An altered spore viability phenotype in which a spore is unable to survive under conditions in which spores of the designated control strain are able to survive. A nonviable spore does not germinate." ;
rdfs:subClassOf obo:OMP_0007837 , obo:OMP_0007839 .
obo:OMP_0007915 a rdfs:Class ;
rdfs:label "absence of biofilm formation" ;
rdfs:comment "A biofilm formation phenotype where a microbe is incapable of forming a biofilm." ;
rdfs:subClassOf obo:OMP_0000176 .
obo:OMP_0005129 a rdfs:Class ;
rdfs:label "altered biofilm formation" ;
rdfs:comment "A biofilm formation phenotype where the occurrence, extent, or timing of biofilm formation is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0000176 , obo:OMP_0007085 .
obo:OMP_0007262 a rdfs:Class ;
rdfs:label "increased cell viability" ;
rdfs:comment "An altered viability phenotype where under the specified conditions the viability of a microbe, cell, or cells is increased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007260 .
obo:OMP_0007143 a rdfs:Class ;
rdfs:label "presence of asexual sporulation" ;
rdfs:comment "An asexual sporulation phenotype where an organism reproduces by the process of forming mitotic spores." ;
rdfs:subClassOf obo:OMP_0007142 .
obo:OMP_0005158 a rdfs:Class ;
rdfs:label "increased protein kinase A activity" ;
rdfs:comment "An altered protein kinase A activity phenotype where protein kinase A activity is increased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0005156 .
obo:OMP_0006030 a rdfs:Class ;
rdfs:label "dinitrogen utilization phenotype" ;
rdfs:comment "A nitrogen source utilization phenotype where dinitrogen (N2) is the source of nitrogen." ;
rdfs:subClassOf obo:OMP_0006026 .
obo:OMP_0005153 a rdfs:Class ;
rdfs:label "presence of ferric reductase activity" ;
rdfs:comment "A ferric reductase phenotype where an organism exhibits ferric reductase activity." ;
rdfs:subClassOf obo:OMP_0005148 .
obo:OMP_0007766 a rdfs:Class ;
rdfs:label "subcellular component phenotype during vegetative growth" ;
rdfs:comment "A physical cellular phenotype affecting the amount, distribution, morphology, or other physical characteristic of a cell part when the cell is in the vegetative growth phase of the life cycle." ;
rdfs:subClassOf obo:OMP_0007748 .
obo:OMP_0007289 a rdfs:Class ;
rdfs:label "increased laccase activity" ;
rdfs:comment "An altered laccase activity phenotype where laccase activity is increased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007288 .
obo:OMP_0007532 a rdfs:Class ;
rdfs:label "abolished lethality in an amoeba host" ;
rdfs:comment "A decreased lethality in an amoeba host phenotype where the ability of an infectious microbe to cause death of an amoeba host is abolished." ;
rdfs:subClassOf obo:OMP_0007529 , obo:OMP_0007530 .
obo:OMP_0006071 a rdfs:Class ;
rdfs:label "altered mutation frequency" ;
rdfs:comment "A mutation frequency phenotype where the frequency, rate, timing, or extent of mutations is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0005048 .
obo:OMP_0006041 a rdfs:Class ;
rdfs:label "increased resistance to quinolone" ;
rdfs:comment "A quinolone compound resistance phenotype where resistance to a quinolone compound is increased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0005034 .
obo:OMP_0000103 a rdfs:Class ;
rdfs:label "colony form phenotype" ;
rdfs:comment "A colony morphology phenotype dealing with the basic shape or form of a colony or colonies." ;
rdfs:subClassOf obo:OMP_0000100 .
obo:OMP_0007118 a rdfs:Class ;
rdfs:label "decreased transcription of gene or operon" ;
rdfs:comment "An altered transcription phenotype where transcription of a gene or genes is decreased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007108 .
obo:OMP_0006023 a rdfs:Class ;
rdfs:label "carbon source utilization phenotype" ;
rdfs:comment "A nutrient utilization phenotype related to the ability of a microbe to utilize a nutrient as a source of carbon." ;
rdfs:subClassOf obo:OMP_0006022 .
obo:OMP_0000053 a rdfs:Class ;
rdfs:label "presence of negative chemotaxis" ;
rdfs:comment "A presence of chemotaxis phenotype where a motile microbe displays directed movement toward a lower concentration of a chemical (away from a higher concentration of a chemical)." ;
rdfs:subClassOf obo:OMP_0000046 .
obo:OMP_0005145 a rdfs:Class ;
rdfs:label "altered vacuolar morphology" ;
rdfs:comment "A vacuolar morphology phenotype where the morphology of a vacuole or vacuoles in a cell is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0005144 , obo:OMP_0007103 .
obo:OMP_0007908 a rdfs:Class ;
rdfs:label "chelator resistance phenotype" ;
rdfs:subClassOf obo:OMP_0007195 .
obo:OMP_0005220 a rdfs:Class ;
rdfs:label "presence of cell fusion" ;
rdfs:comment "A cell fusion phenotype where fusion of individual cells from different organisms occurs." ;
rdfs:subClassOf obo:OMP_0005219 .
obo:OMP_0007442 a rdfs:Class ;
rdfs:label "presence of lethality in mice" ;
rdfs:comment "A presence of lethality phenotype where infection by a microbe can cause death of a mouse (or mice) (Mus musculus)." ;
rdfs:subClassOf obo:OMP_0007395 .
obo:PATO_0000983 a rdfs:Class ;
rdfs:label "impermeable" ;
rdfs:comment "A permeability quality inhering in a bearer by virtue of the bearer's being incapable of being permeated or pervaded by a liquid (as by osmosis or diffusion)." ;
rdfs:subClassOf obo:PATO_0000970 .
obo:OMP_0000114 a rdfs:Class ;
rdfs:label "translucent colony" ;
rdfs:comment "A colony opacity phenotype characterized by an almost clear but distorted, frosted glass appearance." ;
rdfs:subClassOf obo:OMP_0000102 .
obo:OMP_0000358 a rdfs:Class ;
rdfs:label "cell length variability phenotype" ;
rdfs:subClassOf obo:OMP_0007917 .
obo:OMP_0005272 a rdfs:Class ;
rdfs:label "presence of endomembrane system" ;
rdfs:comment "An endomembrane system phenotype where an organism, cell, or cells exhibit an endomembrane system." ;
rdfs:subClassOf obo:OMP_0005269 .
obo:OMP_0000366 a rdfs:Class ;
rdfs:label "cell aspect ratio variability phenotype" ;
rdfs:subClassOf obo:OMP_0007917 .
obo:OMP_0000139 a rdfs:Class ;
rdfs:label "dull colony sheen" ;
rdfs:comment "A colony form phenotype characterized by a dull luster on the surface." ;
rdfs:subClassOf obo:OMP_0000106 .
obo:PATO_0000423 a rdfs:Class ;
rdfs:label "prototrophic" ;
rdfs:comment "A nutritional quality inhering in a bearer by virtue of the bearer's ability to synthesize a particular organic compound required for its growth." ;
rdfs:subClassOf obo:PATO_0000056 .
obo:OMP_0007804 a rdfs:Class ;
rdfs:label "increased vegetative cell population viability" ;
rdfs:comment "An altered cell population viability phenotype observed in the vegetative phase of the life cycle where the proportion of cells that survive a specified treatment is increased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007703 , obo:OMP_0007729 .
obo:OMP_0007597 a rdfs:Class ;
rdfs:label "increased population growth" ;
rdfs:comment "An altered population growth phenotype where the rate, frequency, timing, or extent of reproduction of a microbial population is increased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007157 .
obo:OMP_0008006 a rdfs:Class ;
rdfs:label "presence of a core" ;
rdfs:comment "An endospore core phenotype where the central core is present in an endospore." ;
rdfs:subClassOf obo:OMP_0008004 .
obo:OMP_0005028 a rdfs:Class ;
rdfs:label "altered phospholipase activity" ;
rdfs:comment "A phospholipase activity phenotype where phospholipase activity is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0005000 , obo:OMP_0005130 .
obo:OMP_0005099 a rdfs:Class ;
rdfs:label "response to starvation stress phenotype" ;
rdfs:comment "A stress response phenotype dealing with the response to deprivation of nourishment." ;
rdfs:subClassOf obo:OMP_0000173 .
obo:OMP_0007363 a rdfs:Class ;
rdfs:label "decreased resistance to a nucleoside" ;
rdfs:comment "An altered resistance to a nucleoside phenotype where resistance to a nucleoside is decreased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007361 .
obo:OMP_0007453 a rdfs:Class ;
rdfs:label "absence of survival in macrophage" ;
rdfs:subClassOf obo:OMP_0007455 .
obo:OMP_0007867 a rdfs:Class ;
rdfs:label "abolished resistance to bicyclomycin" ;
rdfs:comment "The original term was deemed to be too granular. In its place, use OMP:0007880 abolished resistance to an antimicrobial agent. When using OMP:0007880 for annotation, enter a database identifier for the specific antimicrobial agent in the Annotation Extension field." .
obo:OMP_0007586 a rdfs:Class ;
rdfs:label "altered resistance to chemical stress" ;
rdfs:comment "A resistance to chemical stress phenotype where the resistance or sensitivity that microbes in a population show when exposed to a chemical stress is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007572 , obo:OMP_0007577 .
obo:OMP_0007374 a rdfs:Class ;
rdfs:label "not resistant to alkylating agent" ;
rdfs:comment "An alkylating agent resistance phenotype where growth and reproduction of a microbe does not occur in the presence of an alkylating agent." ;
rdfs:subClassOf obo:OMP_0007372 .
obo:OMP_0006168 a rdfs:Class ;
rdfs:label "altered binary fission" ;
rdfs:comment "A binary fission phenotype where the rate, frequency, timing, or extent of binary fission is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007067 , obo:OMP_0007144 .
obo:OMP_0007204 a rdfs:Class ;
rdfs:label "decreased resistance to UV-A radiation" ;
rdfs:comment "A decreased resistance to UV radiation phenotype where the resistance of microbes in a population to UV-A radiation (typically, 315-400 nm) is decreased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0005098 .
obo:OMP_0007609 a rdfs:Class ;
rdfs:label "presence of single-strand DNA breaks" ;
rdfs:comment "A presence of DNA break phenotype where single-strand breaks in chromosomal DNA occur." ;
rdfs:subClassOf obo:OMP_0007603 .
obo:OMP_0007755 a rdfs:Class ;
rdfs:label "altered actin cytoskeleton during vegetative growth" ;
rdfs:comment "A cellular physical phenotype observed in the vegetative growth phase of the life cycle in which the amount, distribution, or morphology of all or part of the actin cytoskeleton is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007753 .
obo:OMP_0007065 a rdfs:Class ;
rdfs:label "pteridine resistance phenotype" ;
rdfs:comment "An antimicrobial compound resistance phenotype related to resistance or sensitivity to an organonitrogen heterocyclic compound." ;
rdfs:subClassOf obo:OMP_0000274 .
obo:OMP_0000052 a rdfs:Class ;
rdfs:label "presence of positive chemotaxis" ;
rdfs:comment "A presence of chemotaxis phenotype where a motile microbe displays directed movement towards a higher concentration of a chemical." ;
rdfs:subClassOf obo:OMP_0000046 .
obo:OMP_0007636 a rdfs:Class ;
rdfs:label "altered polysaccharide level" ;
rdfs:comment "An altered level of substance in cell phenotype in which the amount of a polysaccharide measured in a cell is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007634 .
obo:OMP_0005178 a rdfs:Class ;
rdfs:label "abolished acid phosphatase activity" ;
rdfs:comment "A decreased acid phosphatase activity phenotype where acid phosphatase activity is abolished." ;
rdfs:subClassOf obo:OMP_0005175 , obo:OMP_0005177 .
obo:OMP_0000232 a rdfs:Class ;
rdfs:label "iridescent colony" ;
rdfs:comment "A colony opacity phenotype characterized by varying colors being observed in reflected light." ;
rdfs:subClassOf obo:OMP_0000107 .
obo:OMP_0000258 a rdfs:Class ;
rdfs:label "red colony on MacConkey agar" ;
rdfs:comment "A colony morphology phenotype where cells form a red colony on MacConkey agar medium." .
obo:GO_0009987 a rdfs:Class ;
rdfs:label "cellular process" ;
rdfs:comment "Any process that is carried out at the cellular level, but not necessarily restricted to a single cell. For example, cell communication occurs among more than one cell, but occurs at the cellular level." ;
rdfs:subClassOf obo:GO_0008150 .
obo:OMP_0007625 a rdfs:Class ;
rdfs:label "absence of chitin in cell wall" ;
rdfs:comment "A presence of cell wall phenotype where the cell wall of a microbe doesn't contain chitin (CHEBI:17029)." ;
rdfs:subClassOf obo:OMP_0005235 .
obo:OMP_0007492 a rdfs:Class ;
rdfs:label "altered motility by gliding" ;
rdfs:comment "A motility by gliding phenotype where the frequency, rate, timing, or extent of gliding is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007001 .
obo:OMP_0007815 a rdfs:Class ;
rdfs:label "increased cellular pigment accumulation" ;
rdfs:comment "An altered cellular pigment accumulation phenotype where the rate, extent, or timing of the process of pigment accumulation by a microbial cell or cells is increased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007814 .
obo:PATO_0002006 a rdfs:Class ;
rdfs:label "2-D shape" ;
rdfs:comment "A shape that inheres in a 2 dimensional entity, such as a cross section or projection of a 3 dimensional entity." ;
rdfs:subClassOf obo:PATO_0000052 .
obo:OMP_0000160 a rdfs:Class ;
rdfs:label "flat colony elevation" ;
rdfs:comment "A colony elevation phenotype characterized by no growth above the medium." ;
rdfs:subClassOf obo:OMP_0000104 .
obo:OMP_0007301 a rdfs:Class ;
rdfs:label "decreased diazonium blue B staining" ;
rdfs:comment "An altered diazonium blue B (DBB) staining phenotype where DBB staining of cells is decreased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007297 .
obo:OMP_0000128 a rdfs:Class ;
rdfs:label "stalked cell shape" ;
rdfs:comment "A cell shape phenotype where a cell possesses an appendage called a stalk or prostheca (plural, prosthecae), which is a tubular extension of the cell envelope and contains cytosol." ;
rdfs:subClassOf obo:OMP_0000073 .
obo:OMP_0007195 a rdfs:Class ;
rdfs:label "chemical resistance phenotype" ;
rdfs:comment "A biological process phenotype related to the resistance or sensitivity of a microbe to a chemical entity." ;
rdfs:subClassOf obo:OMP_0007167 , obo:OMP_0007194 .
obo:PATO_0005013 a rdfs:Class ;
rdfs:label "incomplete structure" ;
rdfs:comment "A structural quality inhering in a bearer by virtue of the bearer's lacking parts or having a reduced form compared to fully formed entities." ;
rdfs:subClassOf obo:PATO_0000141 .
obo:OMP_0006157 a rdfs:Class ;
rdfs:label "abolished vitamin/enzyme cofactor requirement" ;
rdfs:comment "A decreased vitamin/enzyme cofactor requirement phenotype where the requirement for a vitamin/enzyme cofactor is abolished." ;
rdfs:subClassOf obo:OMP_0007025 .
obo:OMP_0000016 a rdfs:Class ;
rdfs:label "delayed spore germination" ;
rdfs:comment "A spore germination phenotype where a spore undergoes germination after a longer than usual dormancy period." ;
rdfs:subClassOf obo:OMP_0007353 .
obo:OMP_0000187 a rdfs:Class ;
rdfs:label "granulation phenotype" ;
rdfs:comment "A liquid culture morphology phenotype where cells group together and form small particles in the medium." ;
rdfs:subClassOf obo:OMP_0000177 .
obo:OMP_0007889 a rdfs:Class ;
rdfs:label "altered resistance to a metal" ;
rdfs:comment "A metal resistance phenotype where growth and reproduction of a microbe in the presence of a metal is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007248 , obo:OMP_0007890 .
obo:OMP_0000033 a rdfs:Class ;
rdfs:label "absence of pilus" ;
rdfs:comment "A pilus phenotype where an organism does not possess a pilus." ;
rdfs:subClassOf obo:OMP_0000084 .
obo:OMP_0007226 a rdfs:Class ;
rdfs:label "terminal location of endospore" ;
rdfs:comment "An endospore location phenotype where mature spores are located at one terminus of the mother cell (sporangium)." ;
rdfs:subClassOf obo:OMP_0007224 .
obo:PATO_0001407 a rdfs:Class ;
rdfs:label "mononucleate" ;
rdfs:comment "A nucleate quality inhering in a bearer by virtue of the bearer's having one nucleus." ;
rdfs:subClassOf obo:PATO_0002505 .
obo:OMP_0007087 a rdfs:Class ;
rdfs:label "altered iron source utilization" ;
rdfs:comment "An iron source utilization phenotype that is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007061 , obo:OMP_0007104 .
obo:OMP_0007564 a rdfs:Class ;
rdfs:label "altered meiotic nuclear division" ;
rdfs:comment "A meiotic nuclear division phenotype where one or both of the meiotic nuclear divisons is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007342 , obo:OMP_0007561 .
obo:OMP_0006117 a rdfs:Class ;
rdfs:label "abolished population growth at alkaline pH" ;
rdfs:comment "An altered population growth phenotype where growth of a microbial population at alkaline pH (> pH 7) is abolished." ;
rdfs:subClassOf obo:OMP_0007010 .
obo:OMP_0000345 a rdfs:Class ;
rdfs:label "cell population growth yield phenotype" ;
rdfs:subClassOf obo:OMP_0007794 .
obo:OMP_0007480 a rdfs:Class ;
rdfs:label "abolished resistance to phenols" ;
rdfs:comment "A decreased resistance to phenols phenotype where resistance to phenols is abolished." ;
rdfs:subClassOf obo:OMP_0007476 , obo:OMP_0007479 .
obo:OMP_0007475 a rdfs:Class ;
rdfs:label "resistant to phenols" ;
rdfs:comment "A phenols resistance phenotype where an organism, cell, or cells is resistant to phenols." ;
rdfs:subClassOf obo:OMP_0007474 .
obo:GO_0032774 a rdfs:Class ;
rdfs:label "RNA biosynthetic process" ;
rdfs:comment "The chemical reactions and pathways resulting in the formation of RNA, ribonucleic acid, one of the two main type of nucleic acid, consisting of a long, unbranched macromolecule formed from ribonucleotides joined in 3',5'-phosphodiester linkage. Includes polymerization of ribonucleotide monomers." ;
rdfs:subClassOf obo:GO_0009059 , obo:GO_0016070 , obo:GO_0034654 .
obo:OMP_0006086 a rdfs:Class ;
rdfs:label "increased oxidase activity" ;
rdfs:comment "An altered oxidase test phenotype where oxidase activity is increased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0006083 .
obo:OMP_0007356 a rdfs:Class ;
rdfs:label "quinone resistance phenotype" ;
rdfs:comment "An antimicrobial resistance phenotype related to resistance or sensitivity to a quinone. Quinones are compounds having a fully conjugated cyclic dione structure, such as that of benzoquinones, This class includes some polycyclic and heterocyclic compounds." ;
rdfs:subClassOf obo:OMP_0000274 .
obo:OMP_0005283 a rdfs:Class ;
rdfs:label "absence of colonization of host tissue" ;
rdfs:comment "A colonization of host tissue phenotype where a microbe is unable to colonize the tissue of a host." ;
rdfs:subClassOf obo:OMP_0005281 .
obo:PATO_0000150 a rdfs:Class ;
rdfs:label "texture" ;
rdfs:comment "A morphologic quality inhering in a bearer by virtue of the bearer's relative size, organization and distribution of its surface elements or the representation or invention of the appearance of its surface; visual and tactile surface characteristics." ;
rdfs:subClassOf obo:PATO_0000051 .
obo:OMP_0005164 a rdfs:Class ;
rdfs:label "increased phosphatase activity" ;
rdfs:comment "An altered phosphatase activity phenotype where phosphatase activity is increased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0005162 .
obo:OMP_0007737 a rdfs:Class ;
rdfs:label "more irregular colony margin" ;
rdfs:comment "An altered colony morphology phenotype where the margin of a colony growing on a solid surface is not symmetrical." ;
rdfs:subClassOf obo:OMP_0007160 .
obo:OMP_0007610 a rdfs:Class ;
rdfs:label "presence of double-strand DNA breaks" ;
rdfs:comment "A presence of DNA break phenotype where double-strand breaks in chromosomal DNA occur." ;
rdfs:subClassOf obo:OMP_0007603 .
obo:OMP_0007438 a rdfs:Class ;
rdfs:label "abolished sexual sporulation" ;
rdfs:comment "A decreased sexual sporulation phenotype where the formation of sexual spores is abolished." ;
rdfs:subClassOf obo:OMP_0007434 , obo:OMP_0007437 .
obo:OMP_0007521 a rdfs:Class ;
rdfs:label "decreased population growth in high osmolarity" ;
rdfs:comment "An altered growth in high osmolarity phenotype where growth of a microbial population in high osmolarity is decreased relative to a designated control. Decreased growth may reflect a reduced growth rate (i.e., slower growth), reduced growth yield, or both." ;
rdfs:subClassOf obo:OMP_0007519 .
obo:OMP_0005039 a rdfs:Class ;
rdfs:label "response to freeze/thaw stress phenotype" ;
rdfs:comment "A stress response phenotype dealing with the response to cyclic freezing and melting." ;
rdfs:subClassOf obo:OMP_0000173 .
obo:OMP_0000316 a rdfs:Class ;
rdfs:label "increased degree of nucleoid constriction at the onset of cell constriction" ;
rdfs:subClassOf obo:OMP_0000314 .
obo:OMP_0005147 a rdfs:Class ;
rdfs:label "increased vacuolar size" ;
rdfs:comment "An altered vacuolar morphology phenotype where the size of the vacuole is increased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0005145 .
obo:OMP_0007047 a rdfs:Class ;
rdfs:label "decreased utilization of inorganic phosphorus source" ;
rdfs:comment "An inorganic phosphorus source utilization phenotype where the ability to use an inorganic P-containing compound as the source of phosphorus is decreased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007213 .
obo:OMP_0000042 a rdfs:Class ;
rdfs:label "anucleoid" ;
rdfs:comment "A nucleoid phenotype where the nucleoid is absent in some fraction of cells in a population." ;
rdfs:subClassOf obo:OMP_0000150 .
obo:GO_0019954 a rdfs:Class ;
rdfs:label "asexual reproduction" ;
rdfs:comment "The biological process in which new individuals are produced by either a single cell or a group of cells, in the absence of any sexual process." ;
rdfs:subClassOf obo:GO_0000003 .
obo:OMP_0007777 a rdfs:Class ;
rdfs:label "abolished population growth on defined medium" ;
rdfs:comment "An altered population growth on defined medium phenotype where the rate or extent of growth on defined medium is abolished." ;
rdfs:subClassOf obo:OMP_0007776 .
obo:OMP_0000210 a rdfs:Class ;
rdfs:label "colony surface phenotype" ;
rdfs:comment "A colony morphology phenotype that describes the appearance of the surface of a colony or colonies." ;
rdfs:subClassOf obo:OMP_0000100 .
obo:OMP_0006060 a rdfs:Class ;
rdfs:label "resistant to aminoglycoside" ;
rdfs:comment "An aminoglycoside resistance phenotype where microbe is resistant to one or more aminoglycoside compounds." ;
rdfs:subClassOf obo:OMP_0006056 .
obo:OMP_0006039 a rdfs:Class ;
rdfs:label "resistant to macrolide" ;
rdfs:comment "A macrolide compound resistance phenotype where an organism or cell is resistant to one or more macrolide compounds." ;
rdfs:subClassOf obo:OMP_0000321 .
obo:OMP_0000200 a rdfs:Class ;
rdfs:label "colony with non-diffusible pigment" ;
rdfs:comment "A colony pigmentation phenotype characterized by pigmentation only in the colony." ;
rdfs:subClassOf obo:OMP_0000116 .
obo:OMP_0007188 a rdfs:Class ;
rdfs:label "altered_process_quality" ;
rdfs:comment "A quality which inheres in an process that is altered in same way relative to a designated control." ;
rdfs:subClassOf obo:PATO_0001236 .
obo:OMP_0007058 a rdfs:Class ;
rdfs:label "decreased utilization of organic sulfur source" ;
rdfs:comment "An organic sulfur source utilization phenotype where the organism has decreased ability to use an organic S-containing compound as the source of sulfur relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007086 .
obo:PATO_0002505 a rdfs:Class ;
rdfs:label "nucleated" ;
rdfs:comment "A nucleate quality inhering in a bearer by virtue of the bearer's having one or more nucleus." ;
rdfs:subClassOf obo:PATO_0001404 .
obo:GO_0071978 a rdfs:Class ;
rdfs:label "bacterial-type flagellum-dependent swarming motility" ;
rdfs:comment "Bacterial-type flagellum-dependent cell motility in which the action of numerous flagella results in the smooth movement of a group of cells along a solid surface. Swarming motility is observed in groups of bacteria." ;
rdfs:subClassOf obo:GO_0071973 .
obo:OMP_0000157 a rdfs:Class ;
rdfs:label "filiform margin" ;
rdfs:comment "A colony margin phenotype characterized by thread or filamentous shaped edge." ;
rdfs:subClassOf obo:OMP_0000149 .
obo:OMP_0005380 a rdfs:Class ;
rdfs:label "decreased sexual sporulation frequency" ;
rdfs:comment "An altered sexual sporulation frequency phenotype where the fraction of cells in a population that undergo meiosis and forms spores under sporulation-inducing conditions is decreased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0005378 .
obo:OMP_0007744 a rdfs:Class ;
rdfs:label "altered vegetative cell lysis" ;
rdfs:comment "A cell lysis phenotype where the lysis of cells in the vegetative growth phase of the life cycle is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007741 , obo:OMP_0007746 .
obo:OMP_0006102 a rdfs:Class ;
rdfs:label "abolished capsule formation" ;
rdfs:comment "A decreased amount of capsule phenotype where capsule is abolished." ;
rdfs:subClassOf obo:OMP_0000050 , obo:OMP_0000211 .
obo:OMP_0006075 a rdfs:Class ;
rdfs:label "not resistant to pteridine" ;
rdfs:comment "A pteridine compound resistance phenotype where an organism or cell is sensitive to one or more pteridine compounds." ;
rdfs:subClassOf obo:OMP_0007065 .
obo:OMP_0007528 a rdfs:Class ;
rdfs:label "presence of lethality in an amoeba host" ;
rdfs:comment "A presence of lethality phenotype where infection by a microbe can cause death of an amoeba host." ;
rdfs:subClassOf obo:OMP_0007395 .
obo:GO_0051179 a rdfs:Class ;
rdfs:label "localization" ;
rdfs:comment "Any process in which a cell, a substance, or a cellular entity, such as a protein complex or organelle, is transported to or maintained in a specific location." ;
rdfs:subClassOf obo:GO_0008150 .
obo:PATO_0001236 a rdfs:Class ;
rdfs:label "process quality" ;
rdfs:comment "A quality which inheres in an process." ;
rdfs:subClassOf obo:PATO_0000001 .
obo:OMP_0006045 a rdfs:Class ;
rdfs:label "increased resistance to beta-lactam compound" ;
rdfs:comment "A beta-lactam compound resistance phenotype where resistance to a beta-lactam compound is increased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0006021 .
obo:OMP_0007114 a rdfs:Class ;
rdfs:label "sulfide (H2S) oxidation" ;
rdfs:comment "A chemolithotrophic phenotype where energy is derived from the oxidation of hydrogen sulfide (H2S)." ;
rdfs:subClassOf obo:OMP_0007110 .
obo:OMP_0005294 a rdfs:Class ;
rdfs:label "abolished colonization of tissue in an immunocompromised host" ;
rdfs:comment "A decreased colonization of tissue in an immunocompromised host phenotype where colonization is abolished." ;
rdfs:subClassOf obo:OMP_0005290 , obo:OMP_0005293 .
obo:OMP_0005242 a rdfs:Class ;
rdfs:label "delayed cell fusion during mating" ;
rdfs:comment "An altered cell fusion during mating phenotype where the timing of cell fusion during mating is delayed relative to a designated control." ;
rdfs:subClassOf obo:OMP_0005229 .
obo:OMP_0005044 a rdfs:Class ;
rdfs:label "altered mitotic recombination" ;
rdfs:comment "A mitotic recombination phenotype term where the frequency, rate, timing, or extent of mitotic recombination is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0005045 .
obo:OMP_0007539 a rdfs:Class ;
rdfs:label "abolished resistance to a urea derivative" ;
rdfs:comment "A decreased resistance to a urea derivative phenotype where resistance to a structural derivative of urea is abolished." .
obo:OMP_0006142 a rdfs:Class ;
rdfs:label "abolished resistance to chloramphenicol" ;
rdfs:comment "A decreased resistance to chloramphenicol phenotype where resistance to chloramphenicol is abolished." ;
rdfs:subClassOf obo:OMP_0006067 , obo:OMP_0006069 .
obo:OMP_0007982 a rdfs:Class ;
rdfs:label "increased cell diameter variability" ;
rdfs:subClassOf obo:OMP_0007978 .
obo:OMP_0007579 a rdfs:Class ;
rdfs:label "resistance to heat shock phenotype" ;
rdfs:comment "A resistance to stress phenotype related to the resistance or sensitivity of a microbial population to heat shock. Heat shock is a form of temperature stress in which cells are briefly exposed to a high temperature, usually above the highest growth temperature of the microbe." ;
rdfs:subClassOf obo:OMP_0007568 .
obo:OMP_0007971 a rdfs:Class ;
rdfs:label "tolerance to an antimicrobial agent phenotype" ;
rdfs:comment "An antimicrobial agent resistance phenotype that describes the ability of microorganisms to survive a transient exposure to antimicrobial agents at concentrations that would otherwise be lethal. A quantitative measure of tolerance is the minimum duration for killing (MDK)." ;
rdfs:subClassOf obo:OMP_0007877 .
obo:OMP_0007838 a rdfs:Class ;
rdfs:label "altered spore viability" ;
rdfs:comment "A spore viability phenotype where the ability of a microbial spore to survive, germinate, and go on to grow and reproduce is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007260 , obo:OMP_0007835 .
obo:OMP_0000097 a rdfs:Class ;
rdfs:label "absence of chemotaxis" ;
rdfs:comment "A chemotaxis phenotype where a motile microbe doesn't display directed movement in response to a specific chemical concentration gradient." ;
rdfs:subClassOf obo:OMP_0000048 .
obo:PATO_0000498 a rdfs:Class ;
rdfs:label "increased duration" ;
rdfs:comment "A duration quality of a process which is relatively high." ;
rdfs:subClassOf obo:PATO_0001309 , obo:PATO_0002304 .
obo:OMP_0007420 a rdfs:Class ;
rdfs:label "increased akinete formation" ;
rdfs:comment "An altered akinete formation phenotype where the rate, frequency, timing, or extent of akinete formation is increased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007196 .
obo:OMP_0007878 a rdfs:Class ;
rdfs:label "increased resistance to an antimicrobial agent" ;
rdfs:comment "An altered resistance to an antimicrobial agent phenotype where resistance to the antimicrobial agent specified in the annotation extension field is increased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007134 .
obo:OMP_0000384 a rdfs:Class ;
rdfs:label "absence of cell-cell self recognition" ;
rdfs:subClassOf obo:OMP_0000383 .
obo:OMP_0007098 a rdfs:Class ;
rdfs:label "increased motility by twitching" ;
rdfs:comment "An increased motility phenotype where the frequency, rate, timing, or extent of motility by twitching is increased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0000045 , obo:OMP_0007493 .
obo:OMP_0007038 a rdfs:Class ;
rdfs:label "amino acid requirement" ;
rdfs:comment "A growth factor requirement phenotype where the required growth factor is one or more amino acids." ;
rdfs:subClassOf obo:OMP_0007069 .
obo:OMP_0007856 a rdfs:Class ;
rdfs:label "presence of fosfomycin resistance" ;
rdfs:comment "An antimicrobial resistance phenotype where a microbe has the ability to grow and reproduce in the presence of fosfomycin." ;
rdfs:subClassOf obo:OMP_0007847 .
obo:GO_1901576 a rdfs:Class ;
rdfs:label "organic substance biosynthetic process" ;
rdfs:comment "The chemical reactions and pathways resulting in the formation of an organic substance, any molecular entity containing carbon." ;
rdfs:subClassOf obo:GO_0009058 , obo:GO_0071704 .
obo:OMP_0007279 a rdfs:Class ;
rdfs:label "altered protein activity phenotype" ;
rdfs:comment "A protein activity phenotype where the enzymatic or other activity of a protein is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007085 .
obo:OMP_0005261 a rdfs:Class ;
rdfs:label "endocytosis phenotype" ;
rdfs:comment "A transport phenotype relating to endocytosis, which is a vesicle-mediated transport process in which cells take up external materials or membrane constituents by the invagination of a small region of the plasma membrane to form a new membrane-bounded vesicle. A phenotype may affect endocytosis of all cargoes, or of specific cargo such as a particular protein." ;
rdfs:subClassOf obo:OMP_0005260 .
obo:OMP_0007259 a rdfs:Class ;
rdfs:label "microbial cell viability phenotype" ;
rdfs:comment "A cell phenotype related to the ability of a microbial cell to survive and go on to grow and reproduce under the specified conditions." ;
rdfs:subClassOf obo:OMP_0007633 .
obo:OMP_0005357 a rdfs:Class ;
rdfs:label "altered mating efficiency" ;
rdfs:comment "A mating efficiency phenotype where the efficiency of mating is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0005356 .
obo:OMP_0007919 a rdfs:Class ;
rdfs:label "presence of cell population growth" ;
rdfs:subClassOf obo:OMP_0007794 .
obo:OMP_0005125 a rdfs:Class ;
rdfs:label "altered UV-radiation resistance" ;
rdfs:comment "A UV-radiation resistance phenotype where the resistance or sensitivity that microbes in a population show when exposed to UV radiation is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0005084 , obo:OMP_0007594 .
obo:OMP_0000079 a rdfs:Class ;
rdfs:label "monotrichous" ;
rdfs:comment "A flagellum distribution phenotype where an organism has a single flagellum." ;
rdfs:subClassOf obo:OMP_0000078 .
obo:OMP_0007458 a rdfs:Class ;
rdfs:label "nonviable cell population" ;
rdfs:comment "A cell population viability phenotype where all, or almost all, of the cells are nonviable under the specified conditions." ;
rdfs:subClassOf obo:OMP_0007456 .
obo:OMP_0007266 a rdfs:Class ;
rdfs:label "absence of drug-dependent population growth" ;
rdfs:comment "A drug-dependent population growth phenotype where reproduction of an organism is NOT dependent on the presence of a drug in the growth medium." ;
rdfs:subClassOf obo:OMP_0007264 .
obo:OMP_0007392 a rdfs:Class ;
rdfs:label "presence of microbial cell viability" ;
rdfs:comment "A cell viability phenotype where a microbial cell is able to survive and go on to grow and reproduce under the specified conditions." ;
rdfs:subClassOf obo:OMP_0007259 .
obo:OMP_0007675 a rdfs:Class ;
rdfs:label "transporter activity phenotype" ;
rdfs:comment "A molecular function phenotype that affects a transporter activity in a microbe." ;
rdfs:subClassOf obo:OMP_0007674 .
obo:OMP_0000322 a rdfs:Class ;
rdfs:label "cell length phenotype" ;
rdfs:subClassOf obo:OMP_0000074 .
obo:OMP_0005067 a rdfs:Class ;
rdfs:label "presence of gene silencing" ;
rdfs:comment "A gene silencing phenotype where a cell or cells exhibit the ability to perform gene silencing." ;
rdfs:subClassOf obo:OMP_0005046 .
obo:OMP_0007517 a rdfs:Class ;
rdfs:label "presence of population growth in high osmolarity" ;
rdfs:comment "A population growth phenotype where a microbial population can grow in conditions of high osmolarity." ;
rdfs:subClassOf obo:OMP_0007516 .
obo:GO_0031975 a rdfs:Class ;
rdfs:label "envelope" ;
rdfs:comment "A multilayered structure surrounding all or part of a cell; encompasses one or more lipid bilayers, and may include a cell wall layer; also includes the space between layers." ;
rdfs:subClassOf obo:GO_0044464 .
obo:OMP_0005114 a rdfs:Class ;
rdfs:label "increased resistance to SDS-EDTA stress" ;
rdfs:comment "An altered resistance to SDS-EDTA stress phenotype where the resistance that microbes in a population show when exposed to SDS-EDTA is increased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0005126 .
obo:OMP_0007587 a rdfs:Class ;
rdfs:label "increased resistance to cold shock" ;
rdfs:comment "An altered resistance to cold phenotype where the resistance of microbes in a population to temperatures below the optimal growth temperature is increased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007582 .
obo:OMP_0005322 a rdfs:Class ;
rdfs:label "abolished colonization of tissue in an immunocompromised rabbit" ;
rdfs:comment "A decreased colonization of tissue in an immunocompromised rabbit phenotype where colonization is abolished." ;
rdfs:subClassOf obo:OMP_0005321 .
obo:OMP_0000370 a rdfs:Class ;
rdfs:label "presence of internalization by macrophage" ;
rdfs:subClassOf obo:OMP_0000369 .
obo:OMP_0006097 a rdfs:Class ;
rdfs:label "abolished urease activity" ;
rdfs:comment "A decreased urease activity phenotype where urease activity is abolished." ;
rdfs:subClassOf obo:OMP_0006090 , obo:OMP_0006092 .
obo:OMP_0005041 a rdfs:Class ;
rdfs:label "response to alkaline pH stress phenotype" ;
rdfs:comment "A response to stress phenotype dealing with the response to an environment with a pH at or above 7.5." ;
rdfs:subClassOf obo:OMP_0000173 .
obo:OMP_0000198 a rdfs:Class ;
rdfs:label "catalase negative" ;
rdfs:comment "A catalase test phenotype where an organism doesn't exhibit catalase activity." ;
rdfs:subClassOf obo:OMP_0000218 .
obo:OMP_0007580 a rdfs:Class ;
rdfs:label "presence of resistance to cold shock" ;
rdfs:comment "A resistance to cold phenotype where microbes in a population continue to grow and divide when exposed to a temperature below the optimal growth temperature of the microbe." ;
rdfs:subClassOf obo:OMP_0007578 .
obo:OMP_0006055 a rdfs:Class ;
rdfs:label "resistant to azole" ;
rdfs:comment "An azole compound resistance phenotype where an organism or cell is resistant to one or more azole compounds." ;
rdfs:subClassOf obo:OMP_0006028 .
obo:OMP_0007620 a rdfs:Class ;
rdfs:label "altered frequency of Holliday junction structures" ;
rdfs:comment "A Holliday junction structure phenotype where the frequency of Holliday junction structures in chromosomal DNA is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007617 .
obo:OMP_0007497 a rdfs:Class ;
rdfs:label "not resistant to an epoxide" ;
rdfs:comment "An epoxide resistance phenotype where an organism or cell is sensitive to an epoxide." ;
rdfs:subClassOf obo:OMP_0007495 .
obo:OMP_0005060 a rdfs:Class ;
rdfs:label "decreased frequency of chromosome missegregation" ;
rdfs:comment "An altered chromosome segregation phenotype where the frequency of chromosome missegregation is decreased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0006001 .
obo:OMP_0007102 a rdfs:Class ;
rdfs:label "more rounded cell shape" ;
rdfs:comment "An altered cell shape phenotype where a cell's shape is rounder than that of a designated control." ;
rdfs:subClassOf obo:OMP_0007101 .
obo:OMP_0007560 a rdfs:Class ;
rdfs:label "conidiation phenotype" ;
rdfs:comment "An asexual sporulation phenotype relating to the formation of a conidium, which is a nonmotile spore formed by higher fungi; conidia are typically produced by conversion of hyphal elements, or are borne on sporogenous cells on or within specialized structures termed conidiophores." ;
rdfs:subClassOf obo:OMP_0007142 .
obo:PATO_0002005 a rdfs:Class ;
rdfs:label "concavity" ;
rdfs:comment "Surface shape that refers to the inward or outward curvature of the surface." ;
rdfs:subClassOf obo:PATO_0000052 .
obo:PATO_0000140 a rdfs:Class ;
rdfs:label "position" ;
rdfs:comment "A spatial quality inhering in a bearer by virtue of the bearer's spatial location relative to other objects in the vicinity." ;
rdfs:subClassOf obo:PATO_0001018 .
obo:OMP_0000019 a rdfs:Class ;
rdfs:label "increased cell surface area-to-volume ratio" ;
rdfs:subClassOf obo:OMP_0007999 .
obo:OMP_0007882 a rdfs:Class ;
rdfs:label "abolished resistance to host defense peptides" ;
rdfs:comment "A decreased resistance to host defense peptide phenotype where resistance is abolished." ;
rdfs:subClassOf obo:OMP_0007172 , obo:OMP_0007173 .
obo:OMP_0007481 a rdfs:Class ;
rdfs:label "quaternary ammonium salts antimicrobial agent resistance phenotype" ;
rdfs:comment "An antimicrobial agent resistance phenotype relating to the resistance or sensitivity of a microbe to a quaternary ammonium salt. Quaternary ammonium salts are derivatives of ammonium compounds, (NH4+)Y-, in which all four of the hydrogens bonded to nitrogen have been replaced with univalent (usually organyl) groups." ;
rdfs:subClassOf obo:OMP_0000274 .
obo:OMP_0005095 a rdfs:Class ;
rdfs:label "increased resistance to x-ray radiation" ;
rdfs:comment "An altered x-ray radiation phenotype were resistance is increased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0005124 .
obo:OMP_0007076 a rdfs:Class ;
rdfs:label "altered aerotaxis" ;
rdfs:comment "An aerotaxis phenotype where the frequency, rate, timing, or extent of directed movement in response to environmental oxygen is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0000047 , obo:OMP_0007127 .
obo:OMP_0007818 a rdfs:Class ;
rdfs:label "decreased cellular pigment accumulation during vegetative growth" ;
rdfs:comment "An altered cellular pigment accumulation phenotype observed in the vegetative growth phase of the life cycle where the rate, extent, or timing of the process of pigment accumulation by a microbial cell or cells is decreased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007817 .
obo:OMP_0007170 a rdfs:Class ;
rdfs:label "altered resistance to host defense peptides" ;
rdfs:comment "An antimicrobial peptide resistance phenotype where resistance or sensitivity to one or more host defense peptides is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007881 .
obo:OMP_0007346 a rdfs:Class ;
rdfs:label "protein secretion phenotype" ;
rdfs:comment "A biological process phenotype related to the process of protein secretion, which is the controlled release of proteins from a cell." ;
rdfs:subClassOf obo:OMP_0007194 .
obo:OMP_0005362 a rdfs:Class ;
rdfs:label "presence of osmotaxis" ;
rdfs:comment "An osmotaxis phenotype where a motile microbe displays directed movement in response to an osmotic concentration gradient." ;
rdfs:subClassOf obo:OMP_0005361 .
obo:OMP_0007244 a rdfs:Class ;
rdfs:label "decreased sensitivity to bacteriophage" ;
rdfs:comment "An altered bacteriophage sensitivity phenotype where the sensitivity of a cell or cells to a bacteriophage is decreased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007243 .
obo:OMP_0000355 a rdfs:Class ;
rdfs:label "altered timing of nucleoid separation" ;
rdfs:subClassOf obo:OMP_0000353 .
obo:OMP_0005142 a rdfs:Class ;
rdfs:label "increased resistance to killing by host" ;
rdfs:comment "An altered resistance to killing by host phenotype where the ability of a microbe to resist killing by a host is increased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0005141 .
obo:OMP_0007831 a rdfs:Class ;
rdfs:label "altered resistance to a sulfonamide antimicrobial agent" ;
rdfs:comment "A sulfonamide antimicrobial agent resistance phenotype where the ability of microbe to grow and reproduce in the presence of a sulfonamide antimicrobial agent is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007134 , obo:OMP_0007828 .
obo:OMP_0000236 a rdfs:Class ;
rdfs:label "dry colony consistency" ;
rdfs:comment "A colony consistency phenotype where a colony or colonies have a brittle or powdery consistency." ;
rdfs:subClassOf obo:OMP_0000229 .
obo:OMP_0000280 a rdfs:Class ;
rdfs:label "increased cell length" ;
rdfs:comment "An altered cell morphology in which microbial cells are longer than a designated control; i.e. the maximum distance between the cell ends is greater than a designated control." ;
rdfs:subClassOf obo:OMP_0000041 , obo:OMP_0007975 .
obo:OMP_0007367 a rdfs:Class ;
rdfs:label "not resistant to an acridine" ;
rdfs:comment "An acridine resistance phenotype where an organism, cell, or cells is not resistant to an acridine." ;
rdfs:subClassOf obo:OMP_0007365 .
obo:OMP_0007705 a rdfs:Class ;
rdfs:label "cell population viability phenotype" ;
rdfs:comment "A cell population phenotype that describes the proportion of a microbial population that is able to survive a particular treatment." ;
rdfs:subClassOf obo:OMP_0007456 , obo:OMP_0007698 .
obo:OMP_0007330 a rdfs:Class ;
rdfs:label "altered bud neck morphology" ;
rdfs:comment "A bud neck morphology phenotype where the size, shape, or appearance of the bud neck is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007328 , obo:OMP_0007329 .
obo:OMP_0007958 a rdfs:Class ;
rdfs:label "altered population growth at low temperature" ;
rdfs:subClassOf obo:OMP_0005002 , obo:OMP_0007157 .
obo:OMP_0007115 a rdfs:Class ;
rdfs:label "altered population growth rate" ;
rdfs:comment "A population growth phenotype where the rate at which a population of microbes multiplies is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007156 , obo:OMP_0007157 .
obo:OMP_0007248 a rdfs:Class ;
rdfs:label "altered resistance to chemical" ;
rdfs:comment "A chemical resistance phenotype where resistance or sensitivity of a microbe to a chemical is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007157 , obo:OMP_0007195 .
obo:OMP_0007807 a rdfs:Class ;
rdfs:label "decreased cell population viablity upon starvation" ;
rdfs:subClassOf obo:OMP_0007702 .
obo:OMP_0007410 a rdfs:Class ;
rdfs:label "altered akinete morphology" ;
rdfs:comment "An akinete morphology phenotype where the morphology of the akinetes produced by an organism is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007409 , obo:OMP_0007411 .
obo:OMP_0000096 a rdfs:Class ;
rdfs:label "myxospore formation phenotype" ;
rdfs:comment "A sporulation phenotype related to development of a myxospore, a differentiated, resting cell usually within a fruiting body by Myxobacteria." ;
rdfs:subClassOf obo:OMP_0000091 , obo:OMP_0007142 .
obo:OMP_0005205 a rdfs:Class ;
rdfs:label "adhesion phenotype" ;
rdfs:comment "A biological process phenotype that relates to the ability of a microbe to attach to a substrate in the environment or in a host, either directly or indirectly." ;
rdfs:subClassOf obo:OMP_0007194 .
obo:OMP_0008030 a rdfs:Class ;
rdfs:label "altered endospore germ cell wall" ;
rdfs:comment "An endospore germ cell wall phenotype where the germ cell wall is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0008001 .
obo:GO_0009892 a rdfs:Class ;
rdfs:label "negative regulation of metabolic process" ;
rdfs:comment "Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways within a cell or an organism." ;
rdfs:subClassOf obo:GO_0019222 , obo:GO_0048519 .
obo:OMP_0005078 a rdfs:Class ;
rdfs:label "increased resistance to alkaline pH stress" ;
rdfs:comment "An altered resistance to alkaline pH stress phenotype where resistance of microbes in a population to alkaline pH is increased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0005119 .
obo:OMP_0007352 a rdfs:Class ;
rdfs:label "altered cell development" ;
rdfs:comment "A cell development phenotype where development of a cell or cells is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0000070 , obo:OMP_0007342 .
obo:OMP_0007781 a rdfs:Class ;
rdfs:label "septation following abnormal chromosome segregation during vegetative growth" ;
rdfs:comment "A nonviable cell phenotype observed in the vegetative growth phase of the life cycle in which a cell undergoes septation despite abnormal chromosome segregation and gives rise to nonviable daughter cells." ;
rdfs:subClassOf obo:OMP_0007780 .
obo:OMP_0000068 a rdfs:Class ;
rdfs:label "virulence phenotype" ;
rdfs:comment "A microbe-host interaction phenotype related to the ability of a microbe to cause disease in another organism (the host)." ;
rdfs:subClassOf obo:OMP_0000197 .
obo:OMP_0005134 a rdfs:Class ;
rdfs:label "abolished resistance to UV radiation" ;
rdfs:comment "A decreased resistance to UV radiation phenotype where the resistance of microbes in a population to UV radiation is abolished." ;
rdfs:subClassOf obo:OMP_0005098 , obo:OMP_0007283 .
obo:OMP_0007491 a rdfs:Class ;
rdfs:label "absence of motility by twitching" ;
rdfs:comment "An absence of motility phenotype where a microbe is not capable of twitching motility." ;
rdfs:subClassOf obo:OMP_0000133 .
obo:OMP_0000041 a rdfs:Class ;
rdfs:label "increased cell size" ;
rdfs:comment "An altered cell size phenotype where the volume of a cell or cells is increased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007083 .
obo:OMP_0005025 a rdfs:Class ;
rdfs:label "decreased induced expression of the SOS response" ;
rdfs:comment "An altered induced expression of the SOS response phenotype where induced expression of one or more genes in the SOS response is decreased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0005053 .
obo:OMP_0005017 a rdfs:Class ;
rdfs:label "SOS response phenotype" ;
rdfs:comment "A gene expression phenotype related to the expression of a gene or genes that are part of the SOS response. Expression of the SOS response is induced by DNA damage." ;
rdfs:subClassOf obo:OMP_0000253 .
obo:OMP_0007845 a rdfs:Class ;
rdfs:label "unseptated germ tube" ;
rdfs:comment "An altered germ tube morphology phenotype where the germ tube does not contain any septa and does not go on to form a viable dividing cell." ;
rdfs:subClassOf obo:OMP_0007739 .
obo:PATO_0001786 a rdfs:Class ;
rdfs:label "split" ;
rdfs:comment "A shape quality inhering in a bearer by virtue of the bearer's being divided or broken up into parts or divisions." ;
rdfs:subClassOf obo:PATO_0000052 .
obo:OMP_0000142 a rdfs:Class ;
rdfs:label "irregular nucleoid spacing" ;
rdfs:comment "A nucleoid spacing phenotype where multiple nucleoids within a single cell exhibit irregular spacing." ;
rdfs:subClassOf obo:OMP_0000140 .
obo:OMP_0007591 a rdfs:Class ;
rdfs:label "decreased resistance to heat shock" ;
rdfs:comment "An altered resistance to heat shock phenotype where the resistance of a microbial population to heat shock is decreased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007585 .
obo:OMP_0005351 a rdfs:Class ;
rdfs:label "absence of mating" ;
rdfs:comment "A mating phenotype where an organism does not use the process of conjugation for sexual reproduction." ;
rdfs:subClassOf obo:OMP_0007412 .
obo:OMP_0000295 a rdfs:Class ;
rdfs:label "presence of negative supercoiling" ;
rdfs:comment "A DNA supercoiling phenotype where the DNA twists around its axis in the opposite direction from the clockwise turns of the right-handed double helix." ;
rdfs:subClassOf obo:OMP_0000294 .
obo:OMP_0005120 a rdfs:Class ;
rdfs:label "altered resistance to dessication stress phenotype" ;
rdfs:comment "A resistance to dessication stress phenotype where the resistance or sensitivity that microbes in a population show when exposed to dessication stress is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007572 , obo:OMP_0007575 .
obo:OMP_0007709 a rdfs:Class ;
rdfs:label "more convex colony" ;
rdfs:comment "An altered colony morphology phenotype in which the colony spreads to a lesser extent and grows vertically to a greater extent, resulting in a more convex shape, than a designated control colony." ;
rdfs:subClassOf obo:OMP_0007160 .
obo:OMP_0007937 a rdfs:Class ;
rdfs:label "decreased resistance to nutrient limitation" ;
rdfs:subClassOf obo:OMP_0007935 .
obo:OMP_0007789 a rdfs:Class ;
rdfs:label "abolished cell separation after cell division during vegetative growth" ;
rdfs:comment "A cellular process phenotype observed in the vegetative growth phase of the life cycle in which cell separation after cell division is abolished." ;
rdfs:subClassOf obo:OMP_0007790 , obo:OMP_0007792 .
obo:OMP_0005030 a rdfs:Class ;
rdfs:label "increased stress-induced mutagenesis" ;
rdfs:comment "An altered stress-induced mutagenesis phenotype where mutagenesis is increased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0006034 .
obo:OMP_0008041 a rdfs:Class ;
rdfs:label "abolished natural competence" ;
rdfs:comment "A decreased natural competence phenotype where the ability to be transformed by taking up extracellular DNA is abolished." ;
rdfs:subClassOf obo:OMP_0008036 , obo:OMP_0008039 .
obo:OMP_0007669 a rdfs:Class ;
rdfs:label "absence of transport" ;
rdfs:comment "A transport phenotype where a microbe doesn't transport a specific substrate(s) into, out of, or within a cell or between cells." ;
rdfs:subClassOf obo:OMP_0005260 .
obo:OMP_0006016 a rdfs:Class ;
rdfs:label "absence of transposable element transposition" ;
rdfs:comment "A transposable element transposition phenotype where a cell or cells lack transposition of transposable elements." ;
rdfs:subClassOf obo:OMP_0005059 .
obo:OMP_0005250 a rdfs:Class ;
rdfs:label "aerobic population growth phenotype" ;
rdfs:comment "A population growth range phenotype related to the ability of a microbial population to grow in the presence of oxygen gas (O2) at the level found in air (approximately 21%)." ;
rdfs:subClassOf obo:OMP_0000039 .
obo:OMP_0007770 a rdfs:Class ;
rdfs:label "multiseptate vegetative cell" ;
rdfs:comment "An altered physical cellular phenotype observed in the vegetative growth phase of the life cycle characterized by the presence of more than one septum in a cell." ;
rdfs:subClassOf obo:OMP_0007767 .
obo:OMP_0005320 a rdfs:Class ;
rdfs:label "increased colonization of tissue in an immunocompromised rabbit" ;
rdfs:comment "An altered colonization of tissue in an immunocompromised rabbit phenotype where the frequency, rate, timing, or extent of colonization is increased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0005319 .
obo:OMP_0000150 a rdfs:Class ;
rdfs:label "nucleoid phenotype" ;
rdfs:comment "A genetic material phenotype where the trait in question is the nucleoid, the region of a bacterial or archaeal cell to which the DNA is confined." ;
rdfs:subClassOf obo:OMP_0000290 .
obo:PATO_0002346 a rdfs:Class ;
rdfs:label "snowman-shaped" ;
rdfs:comment "A concave 3-D shape quality inhering in a bearer by virtue of the bearer's having two connected parts, roughly spherical, of different sizes." ;
rdfs:subClassOf obo:PATO_0002008 .
obo:GO_0000003 a rdfs:Class ;
rdfs:label "reproduction" ;
rdfs:comment "The production of new individuals that contain some portion of genetic material inherited from one or more parent organisms." ;
rdfs:subClassOf obo:GO_0008150 .
obo:OMP_0000008 a rdfs:Class ;
rdfs:label "presence of budding" ;
rdfs:comment "A budding phenotype where an organism reproduces by the process of budding." ;
rdfs:subClassOf obo:OMP_0000089 .
obo:OMP_0006103 a rdfs:Class ;
rdfs:label "abolished organic carbon source utilization" ;
rdfs:comment "A decreased carbon source utilization phenotype where the ability to utilize an organic carbon source is abolished." ;
rdfs:subClassOf obo:OMP_0007070 , obo:OMP_0007849 .
obo:OMP_0008001 a rdfs:Class ;
rdfs:label "endospore germ cell wall phenotype" ;
rdfs:comment "An endospore external encapsulating structure phenotype that relates to the germ cell wall, a separate layer of peptidoglycan located underneath the cortex and that will become the vegetative cell wall upon endospore germination." ;
rdfs:subClassOf obo:OMP_0007229 .
obo:OMP_0007447 a rdfs:Class ;
rdfs:label "decreased lethality in immunocompromised mice" ;
rdfs:comment "A decreased lethality phenotype where the ability of an infectious microbe to cause death of an immunocompromised mouse host is decreased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007398 .
obo:OMP_0005006 a rdfs:Class ;
rdfs:label "psychrotroph" ;
rdfs:comment "A population growth phenotype where growth of a microbial population can occur between 0 to 7 degrees C with optimum growth at 20 to 30 degrees C. The maximum temperature for population growth is around 35 degrees C." ;
rdfs:subClassOf obo:OMP_0005002 .
obo:OMP_0000254 a rdfs:Class ;
rdfs:label "constitutive transcription" ;
rdfs:comment "An increased transcription phenotype where a gene or genes whose transcription is normally regulated are now transcribed constitutively." ;
rdfs:subClassOf obo:OMP_0007117 .
obo:OMP_0007199 a rdfs:Class ;
rdfs:label "presence of resistance to UV-B radiation" ;
rdfs:comment "A presence of resistance to UV radiation where microbes in a population continue to grow and divide when exposed to UV-B radiation (typically, wavelengths of 280-315 nm)." ;
rdfs:subClassOf obo:OMP_0007282 .
obo:OMP_0007749 a rdfs:Class ;
rdfs:label "altered cellular physical quality phenotype during vegetative growth" ;
rdfs:comment "A cellular physical quality phenotype observed during vegetative growth where a cellular physical quality of a microbial cell or cellular component is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007637 , obo:OMP_0007748 .
obo:OMP_0007716 a rdfs:Class ;
rdfs:label "viable vegetative cell" ;
rdfs:comment "A cell viability phenotype observed in the vegetative growth phase of the life cycle where a microbial cell is able to survive and go on to grow and reproduce in the specified conditions." ;
rdfs:subClassOf obo:OMP_0007392 .
obo:OMP_0005391 a rdfs:Class ;
rdfs:label "presence of multiple tails" ;
rdfs:comment "A phage tail phenotype where more than one tail per virion is present." ;
rdfs:subClassOf obo:OMP_0005383 .
obo:OMP_0000229 a rdfs:Class ;
rdfs:label "colony consistency phenotype" ;
rdfs:comment "A colony morphology phenotype that describes the consistency or texture of a colony or colonies when tested with a needle." ;
rdfs:subClassOf obo:OMP_0000100 .
obo:OMP_0007680 a rdfs:Class ;
rdfs:label "increased transporter activity" ;
rdfs:comment "An altered transporter activity phenotype where the observed rate of a specified transporter activity is increased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007678 .
obo:OMP_0007486 a rdfs:Class ;
rdfs:label "decreased resistance to quaternary ammonium salt antimicrobial agent" ;
rdfs:comment "An altered resistance to quaternary ammonium salts where the frequency, rate, timing, or extent of resistance to quaternary ammonium salts is decreased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007484 .
obo:OMP_0000046 a rdfs:Class ;
rdfs:label "presence of chemotaxis" ;
rdfs:comment "A chemotaxis phenotype where a motile microbe displays directed movement in response to a specific chemical concentration gradient." ;
rdfs:subClassOf obo:OMP_0000048 .
obo:OMP_0000153 a rdfs:Class ;
rdfs:label "singlet nucleoid" ;
rdfs:comment "A nucleoid shape phenotype where the nucleoid isolated from a cell is compacted." ;
rdfs:subClassOf obo:OMP_0000136 .
obo:OMP_0007104 a rdfs:Class ;
rdfs:label "altered nutrient utilization" ;
rdfs:comment "A nutrient utilization phenotype that is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0006022 , obo:OMP_0007085 .
obo:OMP_0007269 a rdfs:Class ;
rdfs:label "decreased drug-dependence of population growth" ;
rdfs:comment "An altered drug-dependent population growth phenotype where dependence of reproduction on the presence of a drug in the growth medium is decreased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007267 .
obo:OMP_0007037 a rdfs:Class ;
rdfs:label "utilization of organic nitrogen phenotype" ;
rdfs:comment "An organic nitrogen source utilization phenotype where an organism can use an organic N-containing compound as the source of nitrogen." .
obo:OMP_0006012 a rdfs:Class ;
rdfs:label "decreased resistance to lantibiotic" ;
rdfs:comment "A lantibiotic resistance phenotype where resistance is decreased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007139 .
obo:OMP_0007871 a rdfs:Class ;
rdfs:label "absence of resistance to A22" ;
rdfs:comment "This term was deemed to be too granular. In its place, use OMP:0007877 not resistant to an antimicrobial agent and enter database identifier for A22 in the Annotation Extension field." .
obo:OMP_0007129 a rdfs:Class ;
rdfs:label "altered outer membrane vesicle production" ;
rdfs:comment "An altered outer membrane vesicles phenotypes where the production of outer membrane vesicles is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0006156 .
obo:OMP_0000369 a rdfs:Class ;
rdfs:label "internalization by macrophage phenotype" ;
rdfs:subClassOf obo:OMP_0007455 .
obo:GO_0009847 a rdfs:Class ;
rdfs:label "spore germination" ;
rdfs:comment "The physiological and developmental changes that occur in a spore following release from dormancy up to the earliest signs of growth (e.g. emergence from a spore wall)." ;
rdfs:subClassOf obo:GO_0032502 .
obo:OMP_0007357 a rdfs:Class ;
rdfs:label "altered cellular component phenotype" ;
rdfs:comment "A cellular component phenotype where a quality of a cellular component is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007197 .
obo:OMP_0007196 a rdfs:Class ;
rdfs:label "altered akinete formation" ;
rdfs:comment "An akinete formation phenotype where the rate, frequency, timing, or extent of akinete formation is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0000093 , obo:OMP_0007145 .
obo:OMP_0008044 a rdfs:Class ;
rdfs:label "plaque size phenotype" ;
rdfs:comment "A bacteriophage plaque morphology phenotype that describe the size of viral plaques." .
obo:OMP_0006079 a rdfs:Class ;
rdfs:label "altered decarboxylase test result" ;
rdfs:comment "A decarboxylase test phenotype where the phenotype of an organism on a decarboxylase test medium is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0000219 , obo:OMP_0007131 .
obo:OMP_0000125 a rdfs:Class ;
rdfs:label "spirochete" ;
rdfs:comment "A spiral cell shape phenotype where a cell forms a flexible spiral." ;
rdfs:subClassOf obo:OMP_0000086 .
obo:OMP_0007947 a rdfs:Class ;
rdfs:label "presence of growth at alkaline pH" ;
rdfs:comment "A population growth phenotype where a microbial population is able to grow and reproduce at alkaline pH (pH>7)." .
obo:OMP_0007926 a rdfs:Class ;
rdfs:label "increased anaerobic population growth" ;
rdfs:comment "An altered anaerobic population growth phenotype where growth of a microbial population in the absence of O2 is increased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0005192 .
obo:OMP_0005194 a rdfs:Class ;
rdfs:label "decreased anaerobic population growth yield" ;
rdfs:comment "An altered anaerobic growth phenotype where the anaerobic growth yield is decreased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007927 .
obo:OMP_0000337 a rdfs:Class ;
rdfs:label "presence of cell circularity variability" ;
rdfs:subClassOf obo:OMP_0007921 .
obo:OMP_0007510 a rdfs:Class ;
rdfs:label "altered titan cell formation" ;
rdfs:comment "A titan cell formation phenotype where the frequency, rate, timing, or extent of titan cell formation is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007554 .
obo:GO_0042221 a rdfs:Class ;
rdfs:label "response to chemical" ;
rdfs:comment "Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a chemical stimulus." ;
rdfs:subClassOf obo:GO_0050896 .
obo:OMP_0005131 a rdfs:Class ;
rdfs:label "abolished resistance to oxidative stress" ;
rdfs:comment "A decreased resistance to oxidative stress phenotype where the resistance of microbes in a population to oxidative stress is abolished." ;
rdfs:subClassOf obo:OMP_0005092 , obo:OMP_0007571 .
obo:OMP_0007820 a rdfs:Class ;
rdfs:label "absence of cellular pigment accumulation during vegetative growth" ;
rdfs:comment "A phenotype observed in the vegetative growth phase of the life cycle where the process of accumulating pigment does not occur in a cell or cells of a microorganism." ;
rdfs:subClassOf obo:OMP_0007819 .
obo:OMP_0005298 a rdfs:Class ;
rdfs:label "altered colonization of mouse tissue" ;
rdfs:comment "A colonization of mouse tissue phenotype where the frequency rate, timing, or extent of colonization is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0005284 , obo:OMP_0005295 .
obo:OMP_0005136 a rdfs:Class ;
rdfs:label "altered cell cycle" ;
rdfs:comment "A cellular process phenotype where the progression of a microbial cell through the cell cycle is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0005115 , obo:OMP_0007085 .
obo:PATO_0001419 a rdfs:Class ;
rdfs:label "sharp" ;
rdfs:comment "A shape quality inhering in a bearer by virtue of the bearer's terminating in a point or edge." ;
rdfs:subClassOf obo:PATO_0000944 .
obo:PATO_0000651 a rdfs:Class ;
rdfs:label "unfused from" ;
rdfs:comment "A structural quality inhering in a bearer by virtue of the bearer's being no longer merged with another entity." ;
rdfs:subClassOf obo:PATO_0000141 .
obo:OMP_0005103 a rdfs:Class ;
rdfs:label "decreased catalytic activity" ;
rdfs:comment "An altered enzymatic activity phenotype where a specified enzymatic activity is decreased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0005130 .
obo:OMP_0007110 a rdfs:Class ;
rdfs:label "chemolithotrophic" ;
rdfs:comment "A chemotrophic phenotype where energy is obtained from the oxidation of inorganic chemicals." ;
rdfs:subClassOf obo:OMP_0007109 .
obo:OMP_0006027 a rdfs:Class ;
rdfs:label "bacteriocin resistance phenotype" ;
rdfs:comment "An antimicrobial peptide resistance phenotype related to resistance or sensitivity to bacteriocins, which are polypeptides synthesized by specific strains of bacteria that are active against other cells of the same or different species." ;
rdfs:subClassOf obo:OMP_0000274 .
obo:OMP_0005216 a rdfs:Class ;
rdfs:label "increased adhesion" ;
rdfs:comment "An altered adhesion phenotype where the frequency, rate, or extent of attachment of a microbe to a surface is increased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0005215 .
obo:OMP_0007598 a rdfs:Class ;
rdfs:label "decreased population growth" ;
rdfs:comment "An altered population growth phenotype where the rate, frequency, timing, or extent of reproduction of a microbial population is decreased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007157 .
obo:OMP_0005234 a rdfs:Class ;
rdfs:label "altered cell wall morphology" ;
rdfs:comment "A cell wall morphology phenotype where the size, shape, or appearance of the cell wall is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0005233 , obo:OMP_0007103 .
obo:OMP_0007181 a rdfs:Class ;
rdfs:label "presence of anaerobic respiration" ;
rdfs:comment "An anaerobic respiration phenotype where an organism, cell, or cells have the ability to perform anaerobic respiration." ;
rdfs:subClassOf obo:OMP_0007072 .
obo:OMP_0007506 a rdfs:Class ;
rdfs:label "titan cell morphology phenotype" ;
rdfs:comment "A cell morphology phenotype relating to the form and structure of titan cells, which are large vegetative cells produced by fungi that typically exhibit altered capsule structure, a thickened cell wall, increased ploidy, and resistance to nitrosative and oxidative stresses." ;
rdfs:subClassOf obo:OMP_0000071 .
obo:OMP_0007979 a rdfs:Class ;
rdfs:label "increased cell length variability" ;
rdfs:subClassOf obo:OMP_0007976 .
obo:OMP_0000006 a rdfs:Class ;
rdfs:label "presence of akinete formation" ;
rdfs:comment "An akinete formation phenotype where a cell or cells have the ability to differentiate into an akinete." ;
rdfs:subClassOf obo:OMP_0000093 , obo:OMP_0007143 .
obo:OMP_0000348 a rdfs:Class ;
rdfs:label "correlation between nucleoid and cell constriction phenotype" ;
rdfs:subClassOf obo:OMP_0000346 .
obo:OMP_0007482 a rdfs:Class ;
rdfs:label "resistant to quaternary ammonium salt antimicrobial agent" ;
rdfs:comment "A quaternary ammonium salts resistance phenotype where an organism or cell is resistant to one or more quaternary ammonium salts." ;
rdfs:subClassOf obo:OMP_0007481 .
obo:OMP_0007092 a rdfs:Class ;
rdfs:label "decreased motility by swarming" ;
rdfs:comment "A decreased motility phenotype where the frequency, rate, timing, or extent of motility by swarming is decreased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0000002 , obo:OMP_0005323 .
obo:OMP_0008027 a rdfs:Class ;
rdfs:label "altered endospore coat" ;
rdfs:comment "An endospore coat phenotype where the endospore coat is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0008007 .
obo:OMP_0007892 a rdfs:Class ;
rdfs:label "resistant to a surfactant" ;
rdfs:comment "A surfactant resistance phenotype where growth and reproduction of a microbe occurs in the presence of a surfactant." ;
rdfs:subClassOf obo:OMP_0007891 .
obo:OMP_0000064 a rdfs:Class ;
rdfs:label "increased cell circularity" ;
rdfs:subClassOf obo:OMP_0000044 .
obo:OMP_0007335 a rdfs:Class ;
rdfs:label "altered autophagic vesicle formation" ;
rdfs:comment "An autophagic vesicle formation phenotype that is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007334 , obo:OMP_0007343 .
obo:OMP_0005248 a rdfs:Class ;
rdfs:label "presence of filamentous growth" ;
rdfs:comment "A filamentous growth phenotype where a microbe exhibits filamentous growth." ;
rdfs:subClassOf obo:OMP_0005243 .
obo:OMP_0005232 a rdfs:Class ;
rdfs:label "abolished cell fusion during mating" ;
rdfs:comment "A decreased cell fusion during mating phenotype where the frequency, rate, timing, or extent of fusion during mating is abolished." ;
rdfs:subClassOf obo:OMP_0005231 .
obo:OMP_0007677 a rdfs:Class ;
rdfs:label "absence of transporter activity" ;
rdfs:comment "A transporter activity phenotype where a microbe lacks a specific transporter activity." ;
rdfs:subClassOf obo:OMP_0007675 .
obo:OMP_0005118 a rdfs:Class ;
rdfs:label "altered resistance to acidic pH stress phenotype" ;
rdfs:comment "A resistance to acidic pH stress phenotype where the resistance or sensitivity that microbes in a population show when exposed to acidic pH is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007572 , obo:OMP_0007573 .
obo:OMP_0000300 a rdfs:Class ;
rdfs:label "altered fraction of cells with two nucleoids" ;
rdfs:subClassOf obo:OMP_0000043 .
obo:OMP_0005237 a rdfs:Class ;
rdfs:label "golgi apparatus phenotype" ;
rdfs:comment "A cellular component phenotype relating to the golgi apparatus, which is the endomembranous cytoplasmic eukaryotic organelle involved in secretion and intracellular transport." ;
rdfs:subClassOf obo:OMP_0007197 .
obo:OMP_0000326 a rdfs:Class ;
rdfs:label "cell surface area phenotype" ;
rdfs:subClassOf obo:OMP_0000074 .
obo:OMP_0000075 a rdfs:Class ;
rdfs:label "coccus" ;
rdfs:comment "A spheroid cell phenotype where a cell is spherical or nearly spherical." ;
rdfs:subClassOf obo:OMP_0007100 .
obo:OMP_0000131 a rdfs:Class ;
rdfs:label "lobed cell shape" ;
rdfs:comment "A cell shape phenotype where a cell has curved or rounded projections or divisions (lobes)." ;
rdfs:subClassOf obo:OMP_0000073 .
obo:OMP_0006178 a rdfs:Class ;
rdfs:label "abolished antimicrobial peptide production" ;
rdfs:comment "An antimicrobial peptide production phenotype where the organism's ability to produce an antimicrobial peptide is abolished." ;
rdfs:subClassOf obo:OMP_0006118 , obo:OMP_0006180 .
obo:OMP_0006136 a rdfs:Class ;
rdfs:label "abolished transposition" ;
rdfs:comment "A decreased rate of transposition phenotype where the ability to perform transposition is abolished." ;
rdfs:subClassOf obo:OMP_0005075 , obo:OMP_0006016 .
obo:PATO_0002083 a rdfs:Class ;
rdfs:label "altered number of" ;
rdfs:comment "Having extra or fewer parts." ;
rdfs:subClassOf obo:PATO_0001555 .
obo:OMP_0006120 a rdfs:Class ;
rdfs:label "abolished heterocyst formation" ;
rdfs:comment "A decreased heterocyst formation phenotype where the ability to form a heterocyst is abolished." ;
rdfs:subClassOf obo:OMP_0000011 , obo:OMP_0000015 .
obo:OMP_0007647 a rdfs:Class ;
rdfs:label "attached lifestyle phenotype" ;
rdfs:comment "A microbial lifestyle phenotype relating to whether a microbe grows and reproduces while physically attached to a surface." ;
rdfs:subClassOf obo:OMP_0007645 .
obo:OMP_0007280 a rdfs:Class ;
rdfs:label "presence of enzymatic activity" ;
rdfs:comment "An enzymatic activity phenotype where a specified enzymatic activity is present in a cell, cells, or organism." ;
rdfs:subClassOf obo:OMP_0000221 .
obo:OMP_0007051 a rdfs:Class ;
rdfs:label "increased utilization of organic phosphorus source" ;
rdfs:comment "An organic phosphorus source utilization phenotype where the ability to use an organic P-containing compound as the source of phosphorus is increased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007214 .
obo:OMP_0007469 a rdfs:Class ;
rdfs:label "altered liquid culture morphology" ;
rdfs:comment "A liquid culture morphology phenotype where the visible appearance of a liquid culture is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0000177 , obo:OMP_0007470 .
obo:GO_0030436 a rdfs:Class ;
rdfs:label "asexual sporulation" ;
rdfs:comment "The formation of spores derived from the products of mitosis. Examples of this process are found in Bacterial species." ;
rdfs:subClassOf obo:GO_0019954 , obo:GO_0043934 .
obo:OMP_0007576 a rdfs:Class ;
rdfs:label "resistance to radiation stress phenotype" ;
rdfs:comment "A resistance to stress phenotype related to the resistance or sensitivity that microbes in a population show when exposed to radiation." ;
rdfs:subClassOf obo:OMP_0007568 .
obo:OMP_0000456 a rdfs:Class ;
rdfs:label "caffeine resistance phenotype" ;
rdfs:comment "An alkaloid resistance phenotype that is related to resistance or sensitivity to caffeine, which is a trimethylxanthine in which the three methyl groups are located at positions 1, 3, and 7." ;
rdfs:subClassOf obo:OMP_0000455 .
obo:OMP_0006049 a rdfs:Class ;
rdfs:label "increased resistance to bacteriocin" ;
rdfs:comment "A bacteriocin compound resistance phenotype where resistance to a bacteriocin is increased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0006020 .
obo:OMP_0007631 a rdfs:Class ;
rdfs:label "increased cell wall protein level" ;
rdfs:comment "An altered cell wall protein level where the amount of cell wall protein measured in a cell is increased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007630 .
obo:OMP_0000284 a rdfs:Class ;
rdfs:label "altered cell population growth yield" ;
rdfs:subClassOf obo:OMP_0000345 , obo:OMP_0007809 .
obo:OMP_0007240 a rdfs:Class ;
rdfs:label "decreased bacteriophage absorption" ;
rdfs:comment "An absence of bacteriophage sensitivity phenotype where a bacterium is resistant to a bacteriophage because the cell or cells are defective for adsorption of the bacteriophage." ;
rdfs:subClassOf obo:OMP_0007244 .
obo:OMP_0000243 a rdfs:Class ;
rdfs:label "sectored colony" ;
rdfs:comment "A colony form phenotype characterized by the formation of wedged shaped sectors of varying colors and appearance in colonies growing on a solid substrate." ;
rdfs:subClassOf obo:OMP_0000103 .
obo:OMP_0007091 a rdfs:Class ;
rdfs:label "decreased motility by gliding" ;
rdfs:comment "A decreased motility phenotype where the frequency, rate, timing, or extent of cell motility by gliding is decreased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0000002 , obo:OMP_0007492 .
obo:OMP_0006009 a rdfs:Class ;
rdfs:label "altered myxospore formation" ;
rdfs:comment "A myxospore formation phenotype where the rate, frequency, timing, or extent of myxospore formation is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0000096 , obo:OMP_0007145 .
obo:OMP_0007637 a rdfs:Class ;
rdfs:label "altered cellular physical quality phenotype" ;
rdfs:comment "A cellular physical quality phenotype where any physical object quality such as morphology, number, location, etc., of a microbial cell or a cellular component is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007633 , obo:OMP_0007638 .
obo:OMP_0000106 a rdfs:Class ;
rdfs:label "colony sheen phenotype" ;
rdfs:comment "A colony surface phenotype characterized by a soft luster on the surface." ;
rdfs:subClassOf obo:OMP_0000210 .
obo:OMP_0005249 a rdfs:Class ;
rdfs:label "absence of filamentous growth" ;
rdfs:comment "A filamentous growth phenotype where a microbe does not exhibit filamentous growth." ;
rdfs:subClassOf obo:OMP_0005243 .
obo:OMP_0000169 a rdfs:Class ;
rdfs:label "spindle colony" ;
rdfs:comment "A colony form phenotype characterized by growth being wide in the middle then tapering at both ends." ;
rdfs:subClassOf obo:OMP_0000103 .
obo:PATO_0001865 a rdfs:Class ;
rdfs:label "spheroid" ;
rdfs:comment "A convex 3-D shape quality inhering in a bearer by virtue of the bearer's having a quadric surface in three dimensions obtained by rotating an ellipse about one of its principal axes. Includes spheres and oblate/prolate spheroids." ;
rdfs:subClassOf obo:PATO_0002007 .
obo:OMP_0005186 a rdfs:Class ;
rdfs:label "decreased cytoskeleton phenotype" ;
rdfs:comment """An altered cytoskeleton morphology phenotype where
cytoskeleton morphology is decreased relative to a designated control.""" .
obo:OMP_0006169 a rdfs:Class ;
rdfs:label "increased binary fission" ;
rdfs:comment "An altered binary fission phenotype where the frequency, rate, timing, or extent of binary fission is increased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0006168 .
obo:OMP_0005265 a rdfs:Class ;
rdfs:label "abolished endocytosis" ;
rdfs:comment "A decreased endocytosis phenotype where the frequency, rate, timing, or extent of endocytosis is abolished." ;
rdfs:subClassOf obo:OMP_0005264 , obo:OMP_0005268 .
obo:OMP_0007835 a rdfs:Class ;
rdfs:label "spore viability phenotype" ;
rdfs:comment "A cell viability phenotype related to the ability of a microbial spore to survive, germinate, and go on to grow and reproduce under the specified conditions." ;
rdfs:subClassOf obo:OMP_0007259 .
obo:OMP_0000351 a rdfs:Class ;
rdfs:label "altered nucleoid number phenotype" ;
rdfs:subClassOf obo:OMP_0000043 .
obo:OMP_0007954 a rdfs:Class ;
rdfs:label "decreased population growth at high temperature" ;
rdfs:subClassOf obo:OMP_0007951 , obo:OMP_0007952 .
obo:OMP_0006139 a rdfs:Class ;
rdfs:label "abolished resistance to azole" ;
rdfs:comment "A decreased resistance to azole phenotype where resistance to azole is abolished." ;
rdfs:subClassOf obo:OMP_0006052 , obo:OMP_0006054 .
obo:OMP_0007701 a rdfs:Class ;
rdfs:label "nonviable spore population" ;
rdfs:comment "A cell population phenotype in which none of the cells in a population of spores are viable. Nonviable spores do not germinate." ;
rdfs:subClassOf obo:OMP_0007699 .
obo:GO_0019438 a rdfs:Class ;
rdfs:label "aromatic compound biosynthetic process" ;
rdfs:comment "The chemical reactions and pathways resulting in the formation of aromatic compounds, any substance containing an aromatic carbon ring." ;
rdfs:subClassOf obo:GO_0006725 , obo:GO_0044249 .
obo:OMP_0007567 a rdfs:Class ;
rdfs:label "abolished meiosis II" ;
rdfs:comment "An abolished meiotic nuclear division phenotype in which the second meiotic nuclear division, in which two chromatids in each chromosome are normally separated, does not occur." ;
rdfs:subClassOf obo:OMP_0007565 .
obo:OMP_0007792 a rdfs:Class ;
rdfs:label "absence of cell separation after cell division during vegetative growth" ;
rdfs:comment "A cellular process phenotype observed during the vegetative growth phase of the life cycle where cells do not separate after cell division." ;
rdfs:subClassOf obo:OMP_0007786 .
obo:OMP_0007238 a rdfs:Class ;
rdfs:label "sensitive to bacteriophage" ;
rdfs:comment "A bacteriophage sensitivity phenotype where a bacterium exhibits sensitivity to a bacteriophage." ;
rdfs:subClassOf obo:OMP_0007237 .
obo:OMP_0007912 a rdfs:Class ;
rdfs:label "decreased resistance to a chelator" ;
rdfs:subClassOf obo:OMP_0007911 .
obo:OMP_0005058 a rdfs:Class ;
rdfs:label "presence of site-specific recombination" ;
rdfs:comment "A site-specific recombination phenotype where a cell or cells have the ability to perform site-specific recombination." ;
rdfs:subClassOf obo:OMP_0005043 .
obo:OMP_0005328 a rdfs:Class ;
rdfs:label "altered agar invasion" ;
rdfs:comment "An agar invasion phenotype where the frequency, rate, timing, or extent of agar invasion is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0005325 .
obo:OMP_0007493 a rdfs:Class ;
rdfs:label "altered cell motility by twitching" ;
rdfs:comment "A cell motility by twitching phenotype where the frequency, rate, timing, or extent of twitching is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007001 .
obo:OMP_0007394 a rdfs:Class ;
rdfs:label "lethality phenotype" ;
rdfs:comment "A microbe-host interaction phenotype related to the ability of a microbe to infect and cause death of a host." ;
rdfs:subClassOf obo:OMP_0000197 .
obo:OMP_0006068 a rdfs:Class ;
rdfs:label "increased resistance to chloramphenicol" ;
rdfs:comment "A chloramphenicol compound resistance phenotype where resistance to a chloramphenicol compound is increased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0006025 .
obo:OMP_0008055 a rdfs:Class ;
rdfs:label "decreased plaque size phenotype" ;
rdfs:comment "A bacteriophage plaque morphology phenotype where the size of viral plaque is decreased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0008049 .
obo:GO_0071704 a rdfs:Class ;
rdfs:label "organic substance metabolic process" ;
rdfs:comment "The chemical reactions and pathways involving an organic substance, any molecular entity containing carbon." ;
rdfs:subClassOf obo:GO_0008152 .
obo:GO_0009058 a rdfs:Class ;
rdfs:label "biosynthetic process" ;
rdfs:comment "The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones." ;
rdfs:subClassOf obo:GO_0008152 .
obo:OMP_0007275 a rdfs:Class ;
rdfs:label "altered frequency of reversing direction of flagellar rotation" ;
rdfs:comment "An altered taxis phenotype where the frequency at which the direction of flagellar rotation reverses is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007127 .
obo:OMP_0005349 a rdfs:Class ;
rdfs:label "resistant to organic aromatic compounds" ;
rdfs:comment "An organic aromatic compound resistance phenotype where an organism or cell is resistant to one or more organic aromatic compounds." ;
rdfs:subClassOf obo:OMP_0005343 .
obo:OMP_0000085 a rdfs:Class ;
rdfs:label "cell envelope morphology phenotype" ;
rdfs:comment "A cell morphology phenotype relating to the size, shape, or appearance of the envelope that surrounds a microbial cell. The envelope includes the cytoplasmic membrane and everything external to the cytoplasmic membrane, encompassing the periplasmic space, cell wall, and outer membrane. Additional layers, such as capsules or S-layers, are also part of the envelope." ;
rdfs:subClassOf obo:OMP_0000071 .
obo:OMP_0005011 a rdfs:Class ;
rdfs:label "alkaliphile" ;
rdfs:comment "A population growth phenotype that applies to microorganisms whose optimal growth occurs between pH 8.0 to 11.5." ;
rdfs:subClassOf obo:OMP_0005008 .
obo:OMP_0007968 a rdfs:Class ;
rdfs:label "abolished population growth during nutrient limitation" ;
rdfs:comment "A decreased cell population growth where the ability of a microbial population to grow under conditions of nutrient limitation ((i.e. conditions where an essential nutrient is present at low concentration) is abolished." ;
rdfs:subClassOf obo:OMP_0007963 , obo:OMP_0007967 .
obo:OMP_0007551 a rdfs:Class ;
rdfs:label "increased rate of haploid fruiting" ;
rdfs:comment "An increased haploid fruiting phenotype where the rate of the process of haploid fruiting is increased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007546 .
obo:OMP_0007324 a rdfs:Class ;
rdfs:label "abolished mucoidy" ;
rdfs:comment "A decreased mucoidy phenotype where mucoid colonies are abolished." ;
rdfs:subClassOf obo:OMP_0007320 , obo:OMP_0007323 .
obo:OMP_0000381 a rdfs:Class ;
rdfs:label "increased acid tolerance response" ;
rdfs:subClassOf obo:OMP_0000378 .
obo:OMP_0000373 a rdfs:Class ;
rdfs:label "increased internalization by macrophage" ;
rdfs:subClassOf obo:OMP_0000372 .
obo:OMP_0007540 a rdfs:Class ;
rdfs:label "virus phenotype" ;
rdfs:comment "A microbial phenotype related to the form and structure of a virus." ;
rdfs:subClassOf obo:OMP_0000000 .
obo:OMP_0005333 a rdfs:Class ;
rdfs:label "altered protein localization" ;
rdfs:comment "A protein localization phenotype in which the localization or placement of proteins within a cell is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0005332 .
obo:OMP_0005047 a rdfs:Class ;
rdfs:label "chromosome segregation phenotype" ;
rdfs:comment "A genetic material phenotype concerning the process in which replicated chromosome(s) are physically separated and apportioned as a set to daughter cells." ;
rdfs:subClassOf obo:OMP_0000000 , obo:OMP_0000290 , obo:OMP_0007194 .
obo:OMP_0005339 a rdfs:Class ;
rdfs:label "altered cell lysis" ;
rdfs:comment "A cell lysis phenotype where the frequency, rate, timing, or extent of cytolysis is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0005336 , obo:OMP_0007638 .
obo:OMP_0007152 a rdfs:Class ;
rdfs:label "persister cell phenotype" ;
rdfs:comment "A growth phenotype related to persister cells, which are dormant variants of vegetatively growing cells that form stochastically in microbial populations. Persister cells are highly resistant to antibiotics." ;
rdfs:subClassOf obo:OMP_0007167 .
obo:PATO_0001163 a rdfs:Class ;
rdfs:label "decreased concentration" ;
rdfs:comment "A concentration which is lower relative to the normal or average." ;
rdfs:subClassOf obo:PATO_0001159 , obo:PATO_0002303 .
obo:PATO_0002302 a rdfs:Class ;
rdfs:label "decreased process quality" ;
rdfs:comment "A quality of a process that has a value that is decreased compared to normal or average." ;
rdfs:subClassOf obo:PATO_0001236 , obo:PATO_0002301 .
obo:OMP_0006147 a rdfs:Class ;
rdfs:label "abolished resistance to tetracycline" ;
rdfs:comment "A decreased resistance to tetracycline phenotype where resistance to tetracycline is abolished." ;
rdfs:subClassOf obo:OMP_0006061 , obo:OMP_0006064 .
obo:OMP_0007840 a rdfs:Class ;
rdfs:label "increased spore viability" ;
rdfs:comment "An altered spore viability phenotype where the ability of a microbial spore to survive, germinate, and go on to grow and reproduce is increased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007838 .
obo:OMP_0000445 a rdfs:Class ;
rdfs:label "resistant to penicillin" ;
rdfs:comment "An antimicrobial compound resistance phenotype where a cell or cells are resistant to penicillin." .
obo:OMP_0000091 a rdfs:Class ;
rdfs:label "sporulation phenotype" ;
rdfs:comment "A cell development phenotype related to formation of a spore, a dormant differentiated cell that can be used for dissemination, survival in adverse conditions, or reproduction." ;
rdfs:subClassOf obo:OMP_0000070 .
obo:OMP_0000305 a rdfs:Class ;
rdfs:label "decreased correlation between nucleoid and cell constriction during cell division" ;
rdfs:subClassOf obo:OMP_0000303 .
obo:OMP_0007378 a rdfs:Class ;
rdfs:label "abolished resistance to alkylating agent" ;
rdfs:comment "An decreased resistance to an alkylating agent phenotype where growth and reproduction of a microbe in the presence of an alkylating agent is abolished." ;
rdfs:subClassOf obo:OMP_0007374 , obo:OMP_0007377 .
obo:OMP_0007658 a rdfs:Class ;
rdfs:label "presence of cellular reactive oxygen species" ;
rdfs:subClassOf obo:OMP_0007657 .
obo:OMP_0005243 a rdfs:Class ;
rdfs:label "filamentous growth phenotype" ;
rdfs:comment "An organismal growth phenotype relating to the process by which a multicellular organism, a unicellular organism, or a group of unicellular organisms grow in a threadlike, filamentous shape." ;
rdfs:subClassOf obo:OMP_0000174 .
obo:OMP_0000218 a rdfs:Class ;
rdfs:label "catalase test phenotype" ;
rdfs:comment "A differential test phenotype that relates to the presence or absence of catalase, an enzyme that catalyzes the decomposition of hydrogen peroxide into oxygen and water." ;
rdfs:subClassOf obo:OMP_0007130 .
obo:OMP_0000299 a rdfs:Class ;
rdfs:label "galactose-1-phosphate uridyl transferase activity" ;
rdfs:comment "An enzymatic activity phenotype where galactose-1-phosphate uridyl transferase activity is present." .
obo:OMP_0008033 a rdfs:Class ;
rdfs:label "altered core" ;
rdfs:comment "An endospore core phenotype where the core is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0008004 .
obo:OMP_0006158 a rdfs:Class ;
rdfs:label "increased outer membrane vesicle production" ;
rdfs:comment "An altered outer membrane vesicle production phenotype where production of outer membrane vesicles is increased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007129 .
obo:OMP_0000070 a rdfs:Class ;
rdfs:label "cell development phenotype" ;
rdfs:comment "A microbial phenotype where the trait in question is the progression of a cell from an initial condition to a later condition." ;
rdfs:subClassOf obo:OMP_0000000 , obo:OMP_0007332 .
obo:OMP_0007432 a rdfs:Class ;
rdfs:label "altered number of flagella" ;
rdfs:comment "An altered flagellum phenotype where the number of flagella per cell or cells is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007105 .
obo:OMP_0005395 a rdfs:Class ;
rdfs:label "icosahedral capsid shape" ;
rdfs:comment "A capsid morphology phenotype where the capsid is shaped like an icosahedron, which is a polyhedron with 20 faces." ;
rdfs:subClassOf obo:OMP_0005394 .
obo:OMP_0007692 a rdfs:Class ;
rdfs:label "presence of vegetative cell growth" ;
rdfs:comment "A vegetative cell growth phenotype in which cell growth occurs in the vegetative growth phase of the life cycle." ;
rdfs:subClassOf obo:OMP_0007691 .
obo:PATO_0001857 a rdfs:Class ;
rdfs:label "concave" ;
rdfs:comment "A shape quality in a bearer by virtue of the bearer's curving inward." ;
rdfs:subClassOf obo:PATO_0002005 .
obo:OMP_0008005 a rdfs:Class ;
rdfs:label "absence of the endospore core" ;
rdfs:comment "An endospore core phenotype where an endospore lacks a central core." ;
rdfs:subClassOf obo:OMP_0008004 .
obo:OMP_0007578 a rdfs:Class ;
rdfs:label "resistance to cold shock phenotype" ;
rdfs:comment "A resistance to stress phenotype related to the resistance or sensitivity of a microbial population to cold shock. Cold shock is a form of temperature stress in which cells are briefly exposed to a low temperature, usually below the lowest growth temperature of the microbe." ;
rdfs:subClassOf obo:OMP_0007568 .
obo:OMP_0007421 a rdfs:Class ;
rdfs:label "decreased akinete formation" ;
rdfs:comment "An altered akinete formation phenotype where the rate, frequency, timing, or extent of akinete formation is decreased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007196 .
obo:OMP_0000120 a rdfs:Class ;
rdfs:label "sarcina" ;
rdfs:comment "A cell arrangement phenotype where cubes of eight coccus cells arise from a division event in three planes." ;
rdfs:subClassOf obo:OMP_0000003 .
obo:OMP_0007293 a rdfs:Class ;
rdfs:label "increased spore germination efficiency" ;
rdfs:comment "A spore germination phenotype where the percentage of spores that germinate is increased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007292 .
obo:OMP_0007509 a rdfs:Class ;
rdfs:label "altered titan cell morphology" ;
rdfs:comment "A titan cell phenotype where the size, shape, or appearance of titan cells is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007103 , obo:OMP_0007506 .
obo:OMP_0007922 a rdfs:Class ;
rdfs:label "absence of cell size variability within a cell population" ;
rdfs:subClassOf obo:OMP_0007917 .
obo:OMP_0007040 a rdfs:Class ;
rdfs:label "vitamin/enzyme cofactor requirement" ;
rdfs:comment "A requires growth factor(s) phenotype where the required growth factor is a vitamin or enzyme cofactor." ;
rdfs:subClassOf obo:OMP_0007069 .
obo:OMP_0007227 a rdfs:Class ;
rdfs:label "swollen sporangium" ;
rdfs:comment "A xx." ;
rdfs:subClassOf obo:OMP_0007224 .
obo:OMP_0007994 a rdfs:Class ;
rdfs:label "decreased cell surface area" ;
rdfs:subClassOf obo:OMP_0007993 .
obo:OMP_0007080 a rdfs:Class ;
rdfs:label "altered gene expression" ;
rdfs:comment "A gene expression phenotype where expression of a gene or genes is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0000253 , obo:OMP_0007085 .
obo:OMP_0007033 a rdfs:Class ;
rdfs:label "increased utilization of inorganic nitrogen source" ;
rdfs:comment "An inorganic nitrogen source utilization phenotype where the ability to use an inorganic N-containing compound as the source of nitrogen is increased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007305 .
obo:OMP_0006135 a rdfs:Class ;
rdfs:label "abolished biofilm formation" ;
rdfs:comment "A decreased biofilm formation phenotype where the ability to form a biofilm is abolished." ;
rdfs:subClassOf obo:OMP_0007026 , obo:OMP_0007915 .
obo:OMP_0005089 a rdfs:Class ;
rdfs:label "increased resistance to freeze/thawing stress" ;
rdfs:comment "An altered freeze/thawing stress phenotype where resistance is increased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0005121 .
obo:OMP_0000017 a rdfs:Class ;
rdfs:label "presence of endospore formation" ;
rdfs:comment "An endospore formation phenotype where the cell possesses the ability to form an endospore." ;
rdfs:subClassOf obo:OMP_0000094 , obo:OMP_0007143 .
obo:OMP_0005344 a rdfs:Class ;
rdfs:label "altered organic aromatic compound resistance" ;
rdfs:comment "An organic aromatic compound resistance phenotype where resistance to an organic aromatic compound is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0005343 .
obo:OMP_0007712 a rdfs:Class ;
rdfs:label "branching of vegetative cell" ;
rdfs:comment "An altered cell shape phenotype observed in the vegetative growth phase of the life cycle in which a daughter cell begins to grow from the lateral portion of the long axis of the cell, and at an angle to the septum or cell division site of the mother cell, resulting in the formation of a single cell that has a branch. This phenotype is not observed in the designated control." ;
rdfs:subClassOf obo:OMP_0007708 .
obo:OMP_0007824 a rdfs:Class ;
rdfs:label "altered nitrofuran resistance" ;
rdfs:comment "A nitrofuran resistance phenotype where resistance to a nitrofuran compound is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007134 , obo:OMP_0007821 .
obo:OMP_0005100 a rdfs:Class ;
rdfs:label "macrolide dependent growth" ;
rdfs:comment "A growth phenotype where growth is dependent on the presence of a macrolide." ;
rdfs:subClassOf obo:OMP_0007264 .
obo:OMP_0008016 a rdfs:Class ;
rdfs:label "presence of an inner endospore membrane" ;
rdfs:comment "An inner endospore membrane phenotype where the endospore has an inner membrane." ;
rdfs:subClassOf obo:OMP_0008014 .
obo:OMP_0007565 a rdfs:Class ;
rdfs:label "abolished meiotic nuclear division" ;
rdfs:comment "An altered meiotic nuclear division phenotype in which one or both meiotic nuclear divisions is abolished." ;
rdfs:subClassOf obo:OMP_0007563 , obo:OMP_0007564 .
obo:OMP_0000344 a rdfs:Class ;
rdfs:label "nucleoid area phenotype" ;
rdfs:subClassOf obo:OMP_0000150 .
obo:OMP_0000176 a rdfs:Class ;
rdfs:label "biofilm formation phenotype" ;
rdfs:comment "A multi-organism phenotype dealing with the process in which microorganisms attach to and grow on a surface and produce extracellular polymers that facilitate attachment and matrix formation." ;
rdfs:subClassOf obo:OMP_0005116 .
obo:PATO_0001846 a rdfs:Class ;
rdfs:label "tangled" ;
rdfs:comment "A structural quality inhering in a bearer by virtue of the bearer's being entwined and difficult to unravel." ;
rdfs:subClassOf obo:PATO_0000141 .
obo:OMP_0000057 a rdfs:Class ;
rdfs:label "presence of negative aerotaxis" ;
rdfs:comment "A presence of aerotaxis phenotype where a motile cell or organism displays directed movement towards a lower concentration of environmental oxygen." ;
rdfs:subClassOf obo:OMP_0000049 .
obo:OMP_0005198 a rdfs:Class ;
rdfs:label "alpha-1,3-mannosyltransferase activity phenotype" ;
rdfs:comment "An enzymatic activity phenotype that relates to the presence or absence of alpha-1,3- mannosyltransferase. Alpha-1,3- mannosyltransferase promotes the catalysis of the transfer of a mannose residue to an oligosaccharide, forming an alpha-(1,3) linkage." ;
rdfs:subClassOf obo:OMP_0000221 .
obo:OMP_0005175 a rdfs:Class ;
rdfs:label "absence of acid phosphatase activity" ;
rdfs:comment "An acid phosphatase activity phenotype where a cell or cells lacks acid phosphatase activity." ;
rdfs:subClassOf obo:OMP_0005173 .
obo:OMP_0007943 a rdfs:Class ;
rdfs:label "decreased survival in macrophage" ;
rdfs:subClassOf obo:OMP_0007454 .
obo:OMP_0007255 a rdfs:Class ;
rdfs:label "altered colonization of a host" ;
rdfs:comment "A colonization of a host phenotype where the frequency, rate, timing, or extent of colonization is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007252 , obo:OMP_0007403 .
obo:OMP_0005226 a rdfs:Class ;
rdfs:label "cell fusion during mating phenotype" ;
rdfs:comment "A cell fusion phenotype relating to the fusion of individual cells from each partner during mating." ;
rdfs:subClassOf obo:OMP_0005219 , obo:OMP_0007412 .
obo:OMP_0005075 a rdfs:Class ;
rdfs:label "decreased rate of transposable element transposition" ;
rdfs:comment "A transposable element transposition phenotype where DNA sequences change position at a lower frequency relative to the designated control." ;
rdfs:subClassOf obo:OMP_0006013 .
obo:PATO_0001514 a rdfs:Class ;
rdfs:label "delaminated" ;
rdfs:comment "A structural quality inhering in a bearer by virtue of the bearer's lacking some outer layer." ;
rdfs:subClassOf obo:PATO_0000141 .
obo:OMP_0005254 a rdfs:Class ;
rdfs:label "microaerophilic population growth phenotype" ;
rdfs:comment "A population growth range phenotype relating to the ability of a microbial population to grow when O2 levels are within the range xx-xx% O2, but does not grow at higher levels of O2 or in the absence of O2." ;
rdfs:subClassOf obo:OMP_0000039 .
obo:OMP_0007017 a rdfs:Class ;
rdfs:label "abolished nutrient import" ;
rdfs:comment "A decreased nutrient import phenotype where the ability to import a nutrient into a cell or organism is abolished." ;
rdfs:subClassOf obo:OMP_0007016 .
obo:OMP_0005107 a rdfs:Class ;
rdfs:label "decreased lifespan" ;
rdfs:comment "An altered lifespan phenotype where the lifespan is decreased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0006033 .
obo:OMP_0000028 a rdfs:Class ;
rdfs:label "decreased number of pili" ;
rdfs:comment "A presence of pilus phenotype where a microorganism has fewer pili per cell relative to a designated control." ;
rdfs:subClassOf obo:OMP_0006010 .
obo:OMP_0007933 a rdfs:Class ;
rdfs:label "presence of resistance to nutrient limitation" ;
rdfs:comment "A resistance to stress phenotype where a microbial population is resistant to limitation for an essential nutrient." ;
rdfs:subClassOf obo:OMP_0007932 .
obo:OMP_0000117 a rdfs:Class ;
rdfs:label "diplococcus" ;
rdfs:comment "A cell arrangement phenotype where an organism forms pairs of coccus cells, which arise from a division event in one plane." ;
rdfs:subClassOf obo:OMP_0000003 .
obo:OMP_0000265 a rdfs:Class ;
rdfs:label "increased nucleoid area variability" ;
rdfs:subClassOf obo:OMP_0000263 .
obo:GO_0007059 a rdfs:Class ;
rdfs:label "chromosome segregation" ;
rdfs:comment "The process in which genetic material, in the form of chromosomes, is organized into specific structures and then physically separated and apportioned to two or more sets. In eukaryotes, chromosome segregation begins with the condensation of chromosomes, includes chromosome separation, and ends when chromosomes have completed movement to the spindle poles." ;
rdfs:subClassOf obo:GO_0044763 .
obo:OMP_0000001 a rdfs:Class ;
rdfs:label "motility phenotype" ;
rdfs:comment "A locomotion phenotype where the trait in question is the self-propelled movement of a microbe from one location to another." ;
rdfs:subClassOf obo:OMP_0000312 , obo:OMP_0007197 .
obo:OMP_0007341 a rdfs:Class ;
rdfs:label "altered cell death" ;
rdfs:comment "A cell death phenotype where death of a cell or cells is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007308 , obo:OMP_0007342 .
obo:OMP_0005090 a rdfs:Class ;
rdfs:label "decreased resistance to freeze/thawing stress" ;
rdfs:comment "An altered freeze/thawing stress phenotype where resistance is decreased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0005121 .
obo:OMP_0000039 a rdfs:Class ;
rdfs:label "O2 effects on population growth phenotype" ;
rdfs:comment "A population growth range phenotype related to how growth of a microbial population is affected by different concentrations of oxygen gas (O2) in the environment." ;
rdfs:subClassOf obo:OMP_0007192 .
obo:OMP_0007901 a rdfs:Class ;
rdfs:label "altered resistance to bile acids" ;
rdfs:comment "A bile acid resistance phenotype where resistance to a bile acid is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007248 , obo:OMP_0007898 .
obo:PATO_0015020 a rdfs:Class ;
rdfs:label "J-shaped" ;
rdfs:comment "A concave 3-D shape quality inhering in a bearer by virtue of the bearer's being shaped in the form of the letter J." ;
rdfs:subClassOf obo:PATO_0002008 .
obo:OMP_0005259 a rdfs:Class ;
rdfs:label "decreased microaerophilic population growth rate" ;
rdfs:comment "An altered microaerophilic population growth phenotype where the rate of growth of a microbial population in a microaerophilic environment is decreased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007929 .
obo:OMP_0007073 a rdfs:Class ;
rdfs:label "fermentation phenotype" ;
rdfs:comment "An energy metabolism phenotype where electrons derived from oxidation of a nutrient are transferred to an endogenous terminal electron acceptor without the involvement of an electron transport chain." ;
rdfs:subClassOf obo:OMP_0000224 .
obo:OMP_0007460 a rdfs:Class ;
rdfs:label "viable vegetative cell population" ;
rdfs:comment "A cell population phenotype in which cells in the population are viable in the vegetative growth phase of the life cycle." ;
rdfs:subClassOf obo:OMP_0007457 .
obo:OMP_0007389 a rdfs:Class ;
rdfs:label "decreased pyrimidine requirement" ;
rdfs:comment "An altered pyrimidine requirement phenotype where an organism's requirement for a purine base is decreased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007075 , obo:OMP_0007387 .
obo:OMP_0007408 a rdfs:Class ;
rdfs:label "altered ascospore formation" ;
rdfs:comment "An ascospore formation phenotype where the frequency, rate, timing, or extent of formation of ascospores is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007401 , obo:OMP_0007435 .
obo:OMP_0006088 a rdfs:Class ;
rdfs:label "altered urease test result" ;
rdfs:comment "A urease test phenotype where urease activity is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0000222 , obo:OMP_0007131 .
obo:OMP_0007767 a rdfs:Class ;
rdfs:label "altered subcellular component phenotype during vegetative growth" ;
rdfs:comment "A physical cellular phenotype observed in the vegetative growth phase of the life cycle where the amount, distribution, morphology, or other physical characteristic of a cell part is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007766 .
obo:OMP_0007862 a rdfs:Class ;
rdfs:label "bicyclomycin antimicrobial agent resistance phenotype" ;
rdfs:comment """The original term and its children were deemed to be too granular and replaced with OMP:0000274 ! antimicrobial agent resistance phenotype and its child terms, which are listed below. When using one of these terms for annotation, enter a database identifier for the specific antimicrobial agent in the Annotation Extension field.
OMP:0007876 resistant to an antimicrobial agent
OMP:0007877 not resistant to an antimicrobial agent
OMP:0007134 altered resistance to an antimicrobial agent
OMP:0007878 increased resistance to an antimicrobial agent
OMP:000 7879 decreased resistance to an antimicrobial agent
OMP:0007880 abolished resistance to an antimicrobial agent""" .
obo:OMP_0000102 a rdfs:Class ;
rdfs:label "colony opacity phenotype" ;
rdfs:comment "A colony morphology phenotype dealing with the degree to which light can pass through a colony." ;
rdfs:subClassOf obo:OMP_0000108 .
obo:GO_0043934 a rdfs:Class ;
rdfs:label "sporulation" ;
rdfs:comment "The process whose specific outcome is the progression of a spore over time, from its initiation to the mature structure. A spore is a structure that can be used for dissemination, for survival of adverse conditions because of its heat and dessication resistance, and/or for reproduction." ;
rdfs:subClassOf obo:GO_0044767 .
obo:GO_0071975 a rdfs:Class ;
rdfs:label "cell swimming" ;
rdfs:comment "Cell motility that results in the smooth movement of a cell through a liquid medium." ;
rdfs:subClassOf obo:GO_0048870 .
obo:OMP_0007961 a rdfs:Class ;
rdfs:label "abolished population growth at low temperature" ;
rdfs:subClassOf obo:OMP_0007957 , obo:OMP_0007960 .
obo:OMP_0007619 a rdfs:Class ;
rdfs:label "absence of Holliday junction structures" ;
rdfs:comment "A Holliday junction structure phenotype where Holliday junction structures are not present in chromosomal DNA." ;
rdfs:subClassOf obo:OMP_0007617 .
obo:OMP_0007527 a rdfs:Class ;
rdfs:label "altered lethality in an amoeba host" ;
rdfs:comment "An altered lethality phenotype where the ability of an infectious microbe to cause death of an amoeba host is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007397 .
obo:OMP_0007055 a rdfs:Class ;
rdfs:label "decreased utilization of inorganic sulfur" ;
rdfs:comment "An inorganic sulfur source utilization phenotype where the organism has decreased ability to use an inorganic S-containing compound as the source of sulfur relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007086 .
obo:OMP_0000387 a rdfs:Class ;
rdfs:label "increased cell-cell self recognition" ;
rdfs:subClassOf obo:OMP_0000386 .
obo:OMP_0005183 a rdfs:Class ;
rdfs:label "absence of actin cytoskeleton" ;
rdfs:comment "An actin cytoskeleton phenotype where a microbial cell or cells lack an actin cytoskeleton." ;
rdfs:subClassOf obo:OMP_0007758 .
obo:GO_0097588 a rdfs:Class ;
rdfs:label "archaeal or bacterial-type flagellum-dependent cell motility" ;
rdfs:comment "Cell motility due to movement of bacterial- or archaeal-type flagella." ;
rdfs:subClassOf obo:GO_0001539 .
obo:OMP_0007026 a rdfs:Class ;
rdfs:label "decreased biofilm formation" ;
rdfs:comment "An altered biofilm phenotype where the amount of biofilm is decreased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0005129 .
obo:OMP_0007672 a rdfs:Class ;
rdfs:label "decreased transport" ;
rdfs:comment "An altered transport phenotype where transport of a substrate(s) is decreased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007670 .
obo:OMP_0007185 a rdfs:Class ;
rdfs:label "decreased anaerobic respiration" ;
rdfs:comment "An altered anaerobic respiration phenotype where the ability to perform anaerobic respiration is decreased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007183 .
obo:OMP_0008022 a rdfs:Class ;
rdfs:label "endospore formation stopped at stage V" ;
rdfs:comment "An interrupted endospore formation phenotype where sporulation is stopped after formation of the coat, but before the endospore has developed its characteristic resistance properties." ;
rdfs:subClassOf obo:OMP_0008018 .
obo:OMP_0006159 a rdfs:Class ;
rdfs:label "decreased outer membrane vesicle production" ;
rdfs:comment "An altered outer membrane vesicle production phenotype where production of outer membrane vesicles is decreased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007129 .
obo:PATO_0000587 a rdfs:Class ;
rdfs:label "decreased size" ;
rdfs:comment "A size quality which is relatively low." ;
rdfs:subClassOf obo:PATO_0000117 , obo:PATO_0002303 .
obo:OMP_0007397 a rdfs:Class ;
rdfs:label "altered lethality" ;
rdfs:comment "A lethality phenotype where the ability of an infectious microbe to cause death of the host is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007394 , obo:OMP_0007403 .
obo:OMP_0007957 a rdfs:Class ;
rdfs:label "absence of population growth at low temperature" ;
rdfs:subClassOf obo:OMP_0005002 .
obo:PATO_0001435 a rdfs:Class ;
rdfs:label "attachment quality" ;
rdfs:comment "A structural quality inhering in a bearer by virtue of the bearer's having connection or association with another entity." ;
rdfs:subClassOf obo:PATO_0000141 .
obo:OMP_0000087 a rdfs:Class ;
rdfs:label "facultative anaerobe" ;
rdfs:comment "A microbial phenotype that describes a microorganism that does not require oxygen gas (O2) for growth but will utilize O2 in metabolic reactions when it is present." ;
rdfs:subClassOf obo:OMP_0007928 .
obo:OMP_0000293 a rdfs:Class ;
rdfs:label "altered fraction of cells with one nucleoid" ;
rdfs:subClassOf obo:OMP_0000043 .
obo:PATO_0000467 a rdfs:Class ;
rdfs:label "present" ;
rdfs:comment "A quality inhering in a bearer by virtue of the bearer's existence." ;
rdfs:subClassOf obo:PATO_0000070 .
obo:OMP_0005197 a rdfs:Class ;
rdfs:label "decreased anaerobic population growth rate" ;
rdfs:comment "An altered anaerobic growth phenotype where the anaerobic growth rate is decreased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007927 .
obo:OMP_0007626 a rdfs:Class ;
rdfs:label "altered cell wall chitin level" ;
rdfs:comment "An altered cell wall morphology phenotype where the amount of chitin (CHEBI:17029) measured in the cell wall of a microbe is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0005234 , obo:OMP_0007636 .
obo:OMP_0000002 a rdfs:Class ;
rdfs:label "decreased motility" ;
rdfs:comment "An altered motility phenotype where the frequency, rate, timing, or extent of a microbe's motility is decreased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007001 .
obo:OMP_0007205 a rdfs:Class ;
rdfs:label "decreased resistance to UV-B radiation" ;
rdfs:comment "A decreased resistance to UV radiation phenotype where the resistance of microbes in a population to UV-B radiation (typically, 280-315 nm) is decreased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0005098 .
obo:OMP_0005176 a rdfs:Class ;
rdfs:label "altered acid phosphatase activity" ;
rdfs:comment "An acid phosphatase activity phenotype where acid phosphatase activity is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0005173 .
obo:OMP_0008011 a rdfs:Class ;
rdfs:label "absence of an outer endospore membrane" ;
rdfs:comment "An outer endospore membrane phenotype where an endospore lacks an outer membrane." ;
rdfs:subClassOf obo:OMP_0008010 .
obo:OMP_0007066 a rdfs:Class ;
rdfs:label "asexual reproduction phenotype" ;
rdfs:comment "A microbial phenotype related to asexual reproduction, the biological process in which new individuals are produced by either a single cell or by a group of cells in the absence of any sexual process." ;
rdfs:subClassOf obo:OMP_0007167 .
obo:OMP_0007178 a rdfs:Class ;
rdfs:label "increased aerobic respiration" ;
rdfs:comment "An altered aerobic respiration phenotype where the ability to perform aerobic respiration is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007177 .
obo:OMP_0006065 a rdfs:Class ;
rdfs:label "resistant to tetracycline" ;
rdfs:comment "A tetracycline compound resistance phenotype where an organism or cell is resistant to one or more tetracycline compounds." ;
rdfs:subClassOf obo:OMP_0006062 .
obo:OMP_0005348 a rdfs:Class ;
rdfs:label "not resistant to organic aromatic compounds" ;
rdfs:comment "An organic aromatic compound resistance phenotype where an organism or cell is sensitive to one or more organic aromatic compounds." ;
rdfs:subClassOf obo:OMP_0005343 .
obo:OMP_0005139 a rdfs:Class ;
rdfs:label "presence of resistance to killing by host" ;
rdfs:comment "A resistance to killing by host phenotype where a microbe is resistant to killing by a host." ;
rdfs:subClassOf obo:OMP_0005111 .
obo:OMP_0007351 a rdfs:Class ;
rdfs:label "altered biological process" ;
rdfs:comment "A biological process phenotype where the rate, frequency, timing, or extent of a biological process is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007085 , obo:OMP_0007194 .
obo:OMP_0007666 a rdfs:Class ;
rdfs:label "bulging cell morphology" ;
rdfs:comment "An altered cell morphology phenotype where a microbial cell or cells exhibit a prominent bulge not present in the designated control." ;
rdfs:subClassOf obo:OMP_0007103 .
obo:PATO_0000406 a rdfs:Class ;
rdfs:label "curved" ;
rdfs:comment "A curvature quality inhering in a bearer by virtue of the bearer's having or being marked by a curve or smoothly rounded bend." ;
rdfs:subClassOf obo:PATO_0001591 .
obo:OMP_0007981 a rdfs:Class ;
rdfs:label "decreased cell diameter variability" ;
rdfs:subClassOf obo:OMP_0007978 .
obo:OMP_0007142 a rdfs:Class ;
rdfs:label "asexual sporulation phenotype" ;
rdfs:comment "A sporulation phenotype related to the formation of spores derived from the products of mitosis." ;
rdfs:subClassOf obo:OMP_0000091 , obo:OMP_0007066 .
obo:OMP_0007557 a rdfs:Class ;
rdfs:label "filamentous growth of a multicellular organism phenotype" ;
rdfs:comment "A filamentous growth phenotype in which a multicellular microbe grows in a threadlike, filamentous shape." ;
rdfs:subClassOf obo:OMP_0005243 .
obo:OMP_0008062 a rdfs:Class ;
rdfs:label "bull's eye plaque appearance morphology" ;
rdfs:comment "An altered bacteriophage plaque morphology phenotype where the appearance of viral plaque has a high central density of surviving colonies and then a depletion region, followed by a high-colony-density region and then finally an apparently clear zone." .
obo:PATO_0001878 a rdfs:Class ;
rdfs:label "sigmoid" ;
rdfs:comment "A shape quality inhering in a bearer by virtue of the bearer's consisting of two curves, in opposite directions. S-shaped." ;
rdfs:subClassOf obo:PATO_0000052 .
obo:OMP_0005020 a rdfs:Class ;
rdfs:label "increased basal expression of the SOS response" ;
rdfs:comment "An altered basal expression of the SOS response phenotype where basal expression of one or more genes in the SOS response is increased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0005054 .
obo:OMP_0006033 a rdfs:Class ;
rdfs:label "altered lifespan phenotype" ;
rdfs:comment "An lifespan phenotype that is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0000090 .
obo:OMP_0007842 a rdfs:Class ;
rdfs:label "presence of germ tube" ;
rdfs:comment "A cell morphology phenotype where a germinating microbial spore has a germ tube." ;
rdfs:subClassOf obo:OMP_0007738 .
obo:OMP_0007271 a rdfs:Class ;
rdfs:label "increased sensitivity to bacteriophage" ;
rdfs:comment "An altered bacteriophage sensitivity phenotype where the sensitivity of a cell or cells to a bacteriophage is increased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007243 .
obo:OMP_0005359 a rdfs:Class ;
rdfs:label "decreased mating efficiency" ;
rdfs:comment "A mating efficiency phenotype where the efficiency of mating is decreased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0005357 .
obo:OMP_0005128 a rdfs:Class ;
rdfs:label "abolished resistance to alkaline pH stress" ;
rdfs:comment "A decreased resistance to alkaline pH stress phenotype where the resistance of microbes in a population to alkaline pH is abolished." ;
rdfs:subClassOf obo:OMP_0005079 .
obo:OMP_0006006 a rdfs:Class ;
rdfs:label "decreased budding" ;
rdfs:comment "An altered budding phenotype where the rate, frequency, timing, or extent of budding is decreased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0006035 .
obo:PATO_0000595 a rdfs:Class ;
rdfs:label "increased volume" ;
rdfs:comment "A volume which is relatively high." ;
rdfs:subClassOf obo:PATO_0000586 , obo:PATO_0000918 .
obo:OMP_0007916 a rdfs:Class ;
rdfs:label "decreased vegetative cell diameter" ;
rdfs:comment "An altered cell size phenotype observed in the vegetative growth phase of the life cycle where the diameter of a microbial cell with a circular cross-section is decreased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0005109 .
obo:GO_0030154 a rdfs:Class ;
rdfs:label "cell differentiation" ;
rdfs:comment "The process in which relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate and its subsequent development to the mature state." ;
rdfs:subClassOf obo:GO_0048869 .
obo:OMP_0006175 a rdfs:Class ;
rdfs:label "decreased multiple fission" ;
rdfs:comment "An altered multiple fission phenotype where the rate, frequency, timing, or extent of multiple fission is decreased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0006174 .
obo:OMP_0000123 a rdfs:Class ;
rdfs:label "coccobacillus cell shape" ;
rdfs:comment "A cell shape phenotype where a cell is intermediate in shape between a coccus (sphere) and a bacillus (rod)." ;
rdfs:subClassOf obo:OMP_0000073 .
obo:OMP_0007773 a rdfs:Class ;
rdfs:label "presence of population growth on defined medium" ;
rdfs:comment "A population growth phenotype where a microbial population is able to grow on a defined medium." ;
rdfs:subClassOf obo:OMP_0007774 .
obo:PATO_0000057 a rdfs:Class ;
rdfs:label "occurrence" ;
rdfs:comment "A quality of a single process inhering in a bearer by virtue of the bearer's occurrence." ;
rdfs:subClassOf obo:PATO_0002323 .
obo:OMP_0007282 a rdfs:Class ;
rdfs:label "presence of UV-radiation resistance" ;
rdfs:comment "A UV-radiation resistance phenotype where microbes in a population continue to grow and divide when exposed to UV radiation." ;
rdfs:subClassOf obo:OMP_0005084 .
obo:OMP_0000192 a rdfs:Class ;
rdfs:label "chemical production phenotype" ;
rdfs:comment "A metabolic phenotype that deals with the chemical reactions and pathways resulting in the formation of chemicals." ;
rdfs:subClassOf obo:OMP_0000180 .
obo:OMP_0005342 a rdfs:Class ;
rdfs:label "increased cell lysis" ;
rdfs:comment "An altered cell lysis phenotype where the frequency, rate, timing, or extent of cytolysis is increased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0005339 .
obo:OMP_0008051 a rdfs:Class ;
rdfs:label "altered plaque appearance" ;
rdfs:comment "A bacteriophage plaque morphology phenotype where the appearance of viral plaque is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0008048 .
obo:OMP_0006119 a rdfs:Class ;
rdfs:label "abolished hemolysis" ;
rdfs:comment "A decreased hemolysis phenotype where hemolysis is abolished." ;
rdfs:subClassOf obo:OMP_0000208 , obo:OMP_0000249 .
obo:OMP_0007727 a rdfs:Class ;
rdfs:label "tapering vegetative cell" ;
rdfs:comment "An altered cell shape phenotype in which a cell in the vegetative growth phase of the life cycle tapers at one end to a diameter smaller than the other. The cell diameter at the narrow end is smaller than that of the designated control." ;
rdfs:subClassOf obo:OMP_0007708 .
obo:OMP_0007930 a rdfs:Class ;
rdfs:label "increased microaerophilic population growth" ;
rdfs:comment "An altered microaerophilic population growth phenotype where growth of a microbial population in a microaerophilic environment is increased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0005257 .
obo:OMP_0006022 a rdfs:Class ;
rdfs:label "nutrient utilization phenotype" ;
rdfs:comment "A microbial phenotype that affects the utilization of a nutrient, which is a substance used for biosynthesis or energy release and capture." ;
rdfs:subClassOf obo:OMP_0000000 .
obo:OMP_0005101 a rdfs:Class ;
rdfs:label "aminoglycoside dependent growth" ;
rdfs:comment "A growth phenotype where growth is dependent on the presence of an aminoglycoside." ;
rdfs:subClassOf obo:OMP_0007264 .
obo:OMP_0007738 a rdfs:Class ;
rdfs:label "germ tube morphology phenotype" ;
rdfs:comment "A cell morphology phenotype relating to the form and structure of the germ tube, which is the slender tubular outgrowth first produced by many spores upon germination." ;
rdfs:subClassOf obo:OMP_0000071 .
obo:OMP_0000073 a rdfs:Class ;
rdfs:label "cell shape phenotype" ;
rdfs:comment "A cell morphology phenotype where the trait in question is the shape of a cell." ;
rdfs:subClassOf obo:OMP_0000071 .
obo:OMP_0000315 a rdfs:Class ;
rdfs:label "decreased degree of nucleoid constriction at the onset of cell constriction" ;
rdfs:subClassOf obo:OMP_0000314 .
obo:OMP_0007322 a rdfs:Class ;
rdfs:label "increased mucoidy" ;
rdfs:subClassOf obo:OMP_0007321 .
obo:OMP_0006070 a rdfs:Class ;
rdfs:label "resistant to chloramphenicol" ;
rdfs:comment "A chloramphenicol compound resistance phenotype where an organism or cell is resistant to chloramphenicol." ;
rdfs:subClassOf obo:OMP_0006066 .
obo:OMP_0007684 a rdfs:Class ;
rdfs:label "cell growth phenotype" ;
rdfs:comment "A growth phenotype related to cell growth, which is the process in which a cell irreversibly increases in size over time by accretion and biosynthetic production of matter similar to that already present." ;
rdfs:subClassOf obo:OMP_0000174 , obo:OMP_0007332 .
obo:OMP_0008038 a rdfs:Class ;
rdfs:label "presence of natural competence" ;
rdfs:comment "A natural competence phenotype where a microbe has the ability to be transformed by taking up extracellular DNA from the environment." ;
rdfs:subClassOf obo:OMP_0008035 .
obo:OMP_0007778 a rdfs:Class ;
rdfs:label "increased population growth on defined medium" ;
rdfs:comment "A population growth on defined medium phenotype where the rate and/or extent of growth is increased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007775 .
obo:OMP_0000134 a rdfs:Class ;
rdfs:label "spherical akinete" ;
rdfs:comment "An akinete morphology phenotype where the organism forms a spherical akinete." ;
rdfs:subClassOf obo:OMP_0007409 .
obo:OMP_0007857 a rdfs:Class ;
rdfs:label "absence of fosfomycin resistance" ;
rdfs:comment "An antimicrobial resistance phenotype where a microbe cannot grow and reproduce in the presence of fosfomycin." ;
rdfs:subClassOf obo:OMP_0007847 .
obo:PATO_0000068 a rdfs:Class ;
rdfs:label "qualitative" ;
rdfs:comment "TODO: define this or obsolete it and move children somewhere else." ;
rdfs:subClassOf obo:PATO_0000001 .
obo:OMP_0007683 a rdfs:Class ;
rdfs:label "bending cell morphology" ;
rdfs:subClassOf obo:OMP_0007103 .
obo:OMP_0006134 a rdfs:Class ;
rdfs:label "abolished quorum sensing" ;
rdfs:comment "A decreased quorum sensing phenotype where the ability to perform quorum sensing is abolished." ;
rdfs:subClassOf obo:OMP_0000063 , obo:OMP_0007028 .
obo:OMP_0008018 a rdfs:Class ;
rdfs:label "interrupted endospore formation" ;
rdfs:comment "An altered endospore formation phenotype where development of the endospore is interrupted before the process is complete." ;
rdfs:subClassOf obo:OMP_0006161 .
obo:OMP_0007992 a rdfs:Class ;
rdfs:label "increased cell volume variability" ;
rdfs:subClassOf obo:OMP_0007990 .
obo:OMP_0006029 a rdfs:Class ;
rdfs:label "quinolone resistance phenotype" ;
rdfs:comment "An antimicrobial compound resistance phenotype related to resistance or sensitivity to a quinolone: an organonitrogen heterocyclic compound whose structure contains a quinolone or quinolone-related structure." ;
rdfs:subClassOf obo:OMP_0000274 .
obo:OMP_0007897 a rdfs:Class ;
rdfs:label "abolished resistance to a surfactant" ;
rdfs:comment "A decreased surfactant resistance phenotype where growth and reproduction of a microbe in the presence of a surfactant is abolished." ;
rdfs:subClassOf obo:OMP_0007893 , obo:OMP_0007896 .
obo:OMP_0000013 a rdfs:Class ;
rdfs:label "decreased endospore formation" ;
rdfs:comment "An altered endospore formation phenotype where the rate, frequency, timing, or extent of endospore formation is decreased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0006161 .
obo:OMP_0008029 a rdfs:Class ;
rdfs:label "altered endospore cortex" ;
rdfs:comment "An endospore cortex phenotype where the endospore cortex is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0008024 .
obo:OMP_0007216 a rdfs:Class ;
rdfs:label "altered rifamycin resistance" ;
rdfs:comment "A rifamycin resistance phenotype where resistance to one or more rifamycin compounds is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007134 , obo:OMP_0007215 .
obo:OMP_0007485 a rdfs:Class ;
rdfs:label "increased resistance to quaternary ammonium salt antimicrobial agent" ;
rdfs:comment "An altered resistance to quaternary ammonium salts where the frequency, rate, timing, or extent of resistance to quaternary ammonium salts is increased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007484 .
obo:OMP_0000360 a rdfs:Class ;
rdfs:label "cell area variability phenotype" ;
rdfs:subClassOf obo:OMP_0007917 .
obo:OMP_0000220 a rdfs:Class ;
rdfs:label "oxidase test phenotype" ;
rdfs:comment "A differential test phenotype that relates to the presence or absence of cytochrome oxidase based on the ability of an organism to oxidize certain aromatic amines to form colored end products." ;
rdfs:subClassOf obo:OMP_0007130 .
obo:OMP_0007891 a rdfs:Class ;
rdfs:label "surfactant resistance phenotype" ;
rdfs:comment "A chemical resistance phenotype relating to the resistance or sensitivity of growth and reproduction of a microbial population in the presence of a surfactant. A surfactant is a substance that lowers the surface tension of the medium in which it is dissolved, and/or the interfacial tension with other phases, and, accordingly, is positively adsorbed at the liquid/vapor and/or at other interfaces." ;
rdfs:subClassOf obo:OMP_0007195 .
obo:OMP_0000275 a rdfs:Class ;
rdfs:label "decreased cell perimeter" ;
rdfs:subClassOf obo:OMP_0000273 .
obo:OMP_0007083 a rdfs:Class ;
rdfs:label "altered cell size" ;
rdfs:comment "An altered cell morphology phenotype in which the volume or dimensions of a microbial cell are altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0000074 , obo:OMP_0007103 .
obo:OMP_0000166 a rdfs:Class ;
rdfs:label "circular colony" ;
rdfs:comment "A colony form phenotype characterized by growth in a round shape." ;
rdfs:subClassOf obo:OMP_0000103 .
obo:OMP_0006036 a rdfs:Class ;
rdfs:label "decreased resistance to macrolide" ;
rdfs:comment "A macrolide compound resistance phenotype where resistance to a macrolide compound is decreased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0006031 .
obo:OMP_0000062 a rdfs:Class ;
rdfs:label "increased virulence" ;
rdfs:comment "An altered virulence phenotype where the rate, frequency, timing, or extent of the ability of a microbe to cause disease in another organism (the host) is increased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0000098 .
obo:OMP_0005202 a rdfs:Class ;
rdfs:label "increased alpha-1,3-mannosyltransferase activity" ;
rdfs:comment "An altered alpha-1,3-mannosyltransferase activity phenotype where alpha-1,3- mannosyltransferase activity is increased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0005201 .
obo:OMP_0007834 a rdfs:Class ;
rdfs:label "abolished resistance to sulfonamide" ;
rdfs:comment "A decreased sulfonamide antimicrobial resistance phenotype where the ability of a microbe to grow and reproduce in the presence of a sulfonamide antimicrobial agent is abolished." ;
rdfs:subClassOf obo:OMP_0007830 , obo:OMP_0007833 .
obo:OMP_0007970 a rdfs:Class ;
rdfs:label "absence of organic nitrogen source utilization" ;
rdfs:subClassOf obo:OMP_0007014 .
obo:OMP_0000268 a rdfs:Class ;
rdfs:label "decreased gene expression" ;
rdfs:comment "An altered gene expression phenotype where expression of a gene or genes is decreased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007080 .
obo:OMP_0000012 a rdfs:Class ;
rdfs:label "abolished spore germination efficiency" ;
rdfs:comment "A decreased spore germination phenotype where no spores germinate." ;
rdfs:subClassOf obo:OMP_0007223 .
obo:OMP_0007868 a rdfs:Class ;
rdfs:label "increased resistance to bicyclomycin" .
obo:OMP_0005311 a rdfs:Class ;
rdfs:label "absence of colonization of rabbit tissue" ;
rdfs:comment "A colonization of rabbit tissue phenotype where a microbe is unable to colonize rabbit tissue." ;
rdfs:subClassOf obo:OMP_0005283 , obo:OMP_0005309 .
obo:OMP_0005368 a rdfs:Class ;
rdfs:label "abolished negative osmotaxis" ;
rdfs:comment "A decreased negative osmotaxis phenotype where negative osmotaxis by a motile microbe is abolished." ;
rdfs:subClassOf obo:OMP_0005367 , obo:OMP_0007514 .
obo:OMP_0000156 a rdfs:Class ;
rdfs:label "erose margin" ;
rdfs:comment "A colony margin phenotype characterized by growth that appears jagged or zig-zagged along the edge of the colony." ;
rdfs:subClassOf obo:OMP_0000149 .
obo:PATO_0001598 a rdfs:Class ;
rdfs:label "protruding" ;
rdfs:comment "A quality inhering in a bearer by virtue of the bearer's extending out above or beyond a surface or boundary." ;
rdfs:subClassOf obo:PATO_0000140 .
obo:OMP_0006145 a rdfs:Class ;
rdfs:label "abolished resistance to pteridine" ;
rdfs:comment "A decreased resistance to pteridine phenotype where resistance to pteridine is abolished." ;
rdfs:subClassOf obo:OMP_0006075 , obo:OMP_0007004 .
obo:OMP_0005045 a rdfs:Class ;
rdfs:label "mitotic recombination phenotype" ;
rdfs:comment "A genetic material phenotype dealing with the exchange, reciprocal or nonreciprocal of genetic material between one DNA molecule and a homologous region of DNA that occurs during mitotic cell cycles." ;
rdfs:subClassOf obo:OMP_0000290 .
obo:OMP_0007853 a rdfs:Class ;
rdfs:label "decreased inorganic carbon source utilization" ;
rdfs:comment "An altered carbon source utilization phenotype where the ability to use an inorganic carbon source is decreased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007078 .
obo:PATO_0000690 a rdfs:Class ;
rdfs:label "discontinuous" ;
rdfs:comment "A quality of a single process inhering in a bearer by virtue of the bearer's being marked by breaks or interruptions." ;
rdfs:subClassOf obo:PATO_0000057 .
obo:PATO_0001306 a rdfs:Class ;
rdfs:label "decreased temperature" ;
rdfs:comment "A temperature which is relatively low." ;
rdfs:subClassOf obo:PATO_0000146 , obo:PATO_0002303 .
obo:OMP_0006167 a rdfs:Class ;
rdfs:label "abolished motility by swarming" ;
rdfs:comment "A decreased motility by swarming phenotype where the ability of a microbe to move by swarming motility is abolished." ;
rdfs:subClassOf obo:OMP_0007000 , obo:OMP_0007092 , obo:OMP_0007489 .
obo:OMP_0005000 a rdfs:Class ;
rdfs:label "phospholipase activity phenotype" ;
rdfs:comment "An enzymatic activity phenotype that alters phospholipase activity. Phospholipases are a family of enzymes that catalyze the hydrolysis of a glycerophospholipid." ;
rdfs:subClassOf obo:OMP_0000221 .
obo:OMP_0007538 a rdfs:Class ;
rdfs:label "decreased resistance to a urea derivative" ;
rdfs:comment "An altered resistance to a urea derivative phenotype where resistance to a derivative of urea is decreased relative to a designated control." .
obo:OMP_0007419 a rdfs:Class ;
rdfs:label "abolished conjugation" ;
rdfs:comment "A decreased conjugation phenotype where conjugation is abolished." ;
rdfs:subClassOf obo:OMP_0007417 .
obo:OMP_0007344 a rdfs:Class ;
rdfs:label "nuclear position phenotype" ;
rdfs:comment "A cell morphology phenotype related to the location of a nucleus or nucleus within a cell or between separating cells." ;
rdfs:subClassOf obo:OMP_0000071 .
obo:OMP_0007113 a rdfs:Class ;
rdfs:label "ferrous iron (Fe2+) oxidation" ;
rdfs:comment "A chemolithotrophic phenotype where energy is obtained from the oxidation of ferrous iron (Fe2+)." ;
rdfs:subClassOf obo:OMP_0007110 .
obo:OMP_0007828 a rdfs:Class ;
rdfs:label "sulfonamide antimicrobial agent resistance phenotype" ;
rdfs:comment "An antimicrobial agent resistance phenotype related to resistance or sensitivity of a microbe to one or more sulfonamide compounds. The sulfonamide function group is -S(=O)2-NH2, a sulfonyl group connected to an amine group." ;
rdfs:subClassOf obo:OMP_0000274 .
obo:OMP_0007297 a rdfs:Class ;
rdfs:label "altered diazonium blue B staining" ;
rdfs:comment "A diazonium blue B (DBB) staining phenotype where the appearance of cells after staining with DBB is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007294 , obo:OMP_0007304 .
obo:OMP_0007851 a rdfs:Class ;
rdfs:label "mixotrophic energy metabolism" ;
rdfs:comment "A metabolic phenotype where an organism can switch between using different sources of energy instead of having a single trophic mode. For example, an organism may switch between phototrophic and chemoorganotrophic growth." ;
rdfs:subClassOf obo:OMP_0000224 .
obo:OMP_0005213 a rdfs:Class ;
rdfs:label "presence of adhesion" ;
rdfs:comment "An adhesion phenotype where a microbe has the ability to attach to a substrate in the environment or in a host, either directly or indirectly." ;
rdfs:subClassOf obo:OMP_0005205 .
obo:OMP_0007434 a rdfs:Class ;
rdfs:label "absence of sexual sporulation" ;
rdfs:comment "A sexual sporulation phenotype where an organism is not able to produce sexual spores." ;
rdfs:subClassOf obo:OMP_0007405 , obo:OMP_0007440 .
obo:OMP_0000098 a rdfs:Class ;
rdfs:label "altered virulence" ;
rdfs:comment "A virulence phenotype where the rate, frequency, time, or extent of the ability of a microbe to cause disease in another organism (host) is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0000068 .
obo:OMP_0000214 a rdfs:Class ;
rdfs:label "cell staining phenotype" ;
rdfs:comment "A microbial phenotype where a cell or cells are treated with a dye or dyes for purposes of identification and classification." ;
rdfs:subClassOf obo:OMP_0000000 .
obo:OMP_0008049 a rdfs:Class ;
rdfs:label "altered plaque size phenotype" ;
rdfs:comment "A bacteriophage plaque morphology phenotype where the size of viral plaque is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0008048 .
obo:PATO_0000001 a rdfs:Class ;
rdfs:label "quality" ;
rdfs:comment "A dependent entity that inheres in a bearer by virtue of how the bearer is related to other entities" .
obo:OMP_0007608 a rdfs:Class ;
rdfs:label "abolished DNA breaks" ;
rdfs:comment "A decreased frequency of DNA breaks phenotype where DNA breaks are abolished." ;
rdfs:subClassOf obo:OMP_0007604 , obo:OMP_0007607 .
obo:OMP_0007879 a rdfs:Class ;
rdfs:label "decreased resistance to an antimicrobial agent" ;
rdfs:comment "An altered resistance to an antimicrobial agent phenotype where resistance to the antimicrobial agent specified in the annotation extension field is decreased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007134 .
obo:OMP_0000502 a rdfs:Class ;
rdfs:label "increased aerotaxis" ;
rdfs:comment "An altered aerotaxis phenotype where the frequency, rate, timing, or extent of aerotaxis is increased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007076 .
obo:OMP_0007265 a rdfs:Class ;
rdfs:label "presence of drug-dependent population growth" ;
rdfs:comment "A drug-dependent population growth phenotype where reproduction of an organism is dependent on the presence of a drug in the growth medium." ;
rdfs:subClassOf obo:OMP_0007264 .
obo:OMP_0000282 a rdfs:Class ;
rdfs:label "decreased population growth rate" ;
rdfs:comment "An altered population growth rate phenotype where the rate at which a microbial population multiplies is decreased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007115 .
obo:PATO_0000642 a rdfs:Class ;
rdfs:label "fused with" ;
rdfs:comment "A structural quality inhering in a bearer by virtue of the bearer's being merged with another entity." ;
rdfs:subClassOf obo:PATO_0000141 .
obo:OMP_0006156 a rdfs:Class ;
rdfs:label "altered outer membrane vesicles" ;
rdfs:comment "An outer membrane vesicle phenotype where the frequency, rate, timing, or extent of production of outer membrane vesicles is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0000202 .
obo:OMP_0000113 a rdfs:Class ;
rdfs:label "presence of motility by twitching" ;
rdfs:comment "A presence of motility phenotype where a microbe exhibits movement over moist surfaces by the extension, tethering, and then retraction of polar pili." ;
rdfs:subClassOf obo:OMP_0000005 .
obo:OMP_0007369 a rdfs:Class ;
rdfs:label "increased resistance to an acridine" ;
rdfs:comment "An altered resistance to an acridine phenotype where resistance is increased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007368 .
obo:PATO_0001925 a rdfs:Class ;
rdfs:label "surface feature shape" ;
rdfs:comment "A surface shape quality inhering in a bearer by virtue of the bearer's shape of features present on its surface or outer shell." ;
rdfs:subClassOf obo:PATO_0000052 .
obo:OMP_0007839 a rdfs:Class ;
rdfs:label "decreased spore viability" ;
rdfs:comment "An altered spore viability phenotype where the ability of a microbial cell to survive, germinate, and go on to grow and reproduce is decreased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007838 .
obo:OMP_0005154 a rdfs:Class ;
rdfs:label "protein kinase A activity phenotype" ;
rdfs:comment "An enzymatic activity phenotype that relates to the presence or absence of protein kinase A, an enzyme that belongs to the kinase AGC group. Protein kinase A acts by phosphorylating a wide array of enzymes, ion channels, chromosomal proteins, and transcription factors." ;
rdfs:subClassOf obo:OMP_0000221 .
obo:OMP_0007535 a rdfs:Class ;
rdfs:label "not resistant to a urea derivative" ;
rdfs:comment "A ureas resistance phenotype where a microbe is not resistant to a derivative of urea." .
obo:OMP_0007167 a rdfs:Class ;
rdfs:label "population growth phenotype" ;
rdfs:comment "A microbial phenotype relating to the growth of a microbial population, i.e. an increase in the size of the population resulting from reproduction of individual microbes in the population." ;
rdfs:subClassOf obo:OMP_0000000 , obo:OMP_0007006 , obo:OMP_0007194 .
obo:OMP_0006087 a rdfs:Class ;
rdfs:label "decreased oxidase activity" ;
rdfs:comment "An altered oxidase test phenotype where oxidase activity is decreased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0006083 .
obo:OMP_0007377 a rdfs:Class ;
rdfs:label "decreased resistance to alkylating agent" ;
rdfs:comment "An altered resistance to an alkylating agent phenotype where growth and reproduction of a microbe in the presence of an alkylating agent is decreased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007375 .
obo:OMP_0007950 a rdfs:Class ;
rdfs:label "presence of population growth at high temperature" ;
rdfs:comment "A population growth phenotype where a microbial population is able to grow and reproduce at a temperature that is towards the upper end of the organism's temperature growth range." ;
rdfs:subClassOf obo:OMP_0005002 .
obo:OMP_0007004 a rdfs:Class ;
rdfs:label "decreased resistance to pteridine" ;
rdfs:comment "A pteridine resistance phenotype where resistance to a pteridine compound is decreased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0006032 .
obo:CHEBI_25944 a rdfs:Class ;
rdfs:label "pesticide" ;
rdfs:comment "Strictly, a substance intended to kill pests. In common usage, any substance used for controlling, preventing, or destroying animal, microbiological or plant pests." ;
rdfs:subClassOf obo:CHEBI_33232 .
obo:OMP_0000372 a rdfs:Class ;
rdfs:label "altered internalization by macrophage" ;
rdfs:subClassOf obo:OMP_0000369 .
obo:OMP_0007044 a rdfs:Class ;
rdfs:label "growth factor requirement phenotype" ;
rdfs:comment "A nutrient utilization phenotype related to whether an organism requires an essential organic compound (growth factor) for growth and reproduction." ;
rdfs:subClassOf obo:OMP_0006022 .
obo:OMP_0007496 a rdfs:Class ;
rdfs:label "resistant to an epoxide" ;
rdfs:comment "An epoxide resistance phenotype where an organism, cell, or cells is resistant to an epoxide." ;
rdfs:subClassOf obo:OMP_0007495 .
obo:OMP_0005038 a rdfs:Class ;
rdfs:label "response to oxidative stress phenotype" ;
rdfs:comment "This is a high-level term whose primary purpose is to organize terms beneath it in the ontology, and we expect that it will not be used for direct annotations. Please consider using a more specific term to annotate each phenotype." ;
rdfs:subClassOf obo:OMP_0000173 .
obo:OMP_0000219 a rdfs:Class ;
rdfs:label "decarboxylase test phenotype" ;
rdfs:comment "A differential test phenotype that describes the ability of an organism to catalyze the removal of a carboxyl group from an amino acid, typically lysine, ornithine, or arginine." ;
rdfs:subClassOf obo:OMP_0007130 .
obo:OMP_0007905 a rdfs:Class ;
rdfs:label "altered nitrogen source utilization" ;
rdfs:subClassOf obo:OMP_0006026 , obo:OMP_0007104 .
obo:OMP_0005165 a rdfs:Class ;
rdfs:label "presence of phosphatase activity" ;
rdfs:comment "A phosphatase phenotype where an organism exhibits phosphatase activity." ;
rdfs:subClassOf obo:OMP_0005160 .
obo:OMP_0005290 a rdfs:Class ;
rdfs:label "absence of colonization of tissue in an immunocompromised host" ;
rdfs:comment "A colonization of tissue in an immunocompromised host phenotype where a microbe is unable to colonize tissue of an immunocompromised host." ;
rdfs:subClassOf obo:OMP_0005288 .
obo:OMP_0000361 a rdfs:Class ;
rdfs:label "cell volume variability phenotype" ;
rdfs:subClassOf obo:OMP_0007917 .
obo:OMP_0000289 a rdfs:Class ;
rdfs:label "increased number of anucleoid cells" ;
rdfs:comment "An anucleoid phenotype where the fraction of anucleoid cells in a population is increased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0000042 .
obo:OMP_0007524 a rdfs:Class ;
rdfs:label "presence of lethality in an invertebrate host" ;
rdfs:comment "A presence of lethality phenotype where infection by a microbe can cause death of an invertebrate host." ;
rdfs:subClassOf obo:OMP_0007395 .
obo:OMP_0007650 a rdfs:Class ;
rdfs:label "resistant to mitomycin" ;
rdfs:subClassOf obo:OMP_0007649 .
obo:OMP_0005117 a rdfs:Class ;
rdfs:label "presence of hemolysis" ;
rdfs:comment "A hemolysis test phenotype where a cell or cells causes hemolysis." ;
rdfs:subClassOf obo:OMP_0000099 .
obo:OMP_0005071 a rdfs:Class ;
rdfs:label "decreased mitotic recombination" ;
rdfs:comment "An altered mitotic recombination phenotype where mitotic recombination is decreased relative to the designated control." ;
rdfs:subClassOf obo:OMP_0005044 .
obo:OMP_0005027 a rdfs:Class ;
rdfs:label "stress-induced mutagenesis phenotype" ;
rdfs:comment "A genetic material phenotype relating to the process or processes that give rise to mutations that occur after imposition of a non-lethal stress." ;
rdfs:subClassOf obo:OMP_0000290 .
obo:OMP_0000451 a rdfs:Class ;
rdfs:label "heme utilization phenotype" ;
rdfs:comment "An iron source utilization phenotype where the nutrient being utilized is heme, which is a compound of iron complexed in a porphyrin (tetrapyrrole) ring." ;
rdfs:subClassOf obo:OMP_0007061 .
obo:OMP_0007094 a rdfs:Class ;
rdfs:label "decreased motility by twitching" ;
rdfs:comment "A decreased motility phenotype where the frequency, rate, timing, or extent of motility by twitching is decreased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0000002 , obo:OMP_0007493 .
obo:OMP_0005289 a rdfs:Class ;
rdfs:label "presence of colonization of tissue in an immunocompromised host" ;
rdfs:comment "A colonization of tissue in an immunocompromised host phenotype where a microbe is able to colonize tissue of an immunocompromised host." ;
rdfs:subClassOf obo:OMP_0005288 .
obo:OMP_0000181 a rdfs:Class ;
rdfs:label "colony with diffusible pigment" ;
rdfs:comment "A colony pigmentation phenotype characterized by the presence of diffusible/water soluble pigments that color the agar around the colony." ;
rdfs:subClassOf obo:OMP_0000116 .
obo:OMP_0005098 a rdfs:Class ;
rdfs:label "decreased resistance to UV radiation" ;
rdfs:comment "An altered UV radiation resistance phenotype where the resistance of microbes in a population to UV radiation is decreased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0005125 .
obo:OMP_0005229 a rdfs:Class ;
rdfs:label "altered cell fusion during mating" ;
rdfs:comment "A cell fusion during mating phenotype where the frequency, rate, timing, or extent of cell fusion during mating is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0005226 .
obo:OMP_0005307 a rdfs:Class ;
rdfs:label "decreased colonization of tissue in an immunocompromised mouse" ;
rdfs:comment "An altered colonization of tissue in an immunocompromised mouse phenotype where the frequency, rate, timing, or extent of colonization is decreased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0005305 .
obo:OMP_0005336 a rdfs:Class ;
rdfs:label "cell lysis phenotype" ;
rdfs:comment "A cell death phenotype relating to cytolysis, which is the rupture of cell membranes and the loss of cytoplasm. In some microorganisms, the integrity of the cell wall is also compromised." ;
rdfs:subClassOf obo:OMP_0007308 .
obo:OMP_0000383 a rdfs:Class ;
rdfs:label "cell-cell self recognition phenotype" ;
rdfs:comment """A biological process phenotype concerning whether cells of one strain of a microbial taxon are able to
discriminate between cells of the same strain and cells that belong to a different strain of the same taxon, i.e. the ability to discriminate between self and non-self.""" ;
rdfs:subClassOf obo:OMP_0007194 .
obo:OMP_0007307 a rdfs:Class ;
rdfs:label "absence of inorganic nitrogen utilization" ;
rdfs:comment "An inorganic nitrogen source utilization phenotype where a cell or cells lacks the ability to use inorganic compounds as the source of nitrogen." ;
rdfs:subClassOf obo:OMP_0007013 .
obo:OMP_0005069 a rdfs:Class ;
rdfs:label "decreased mutation frequency" ;
rdfs:comment "An altered mutation frequency phenotype where the mutation frequency is decreased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0006071 .
obo:OMP_0000311 a rdfs:Class ;
rdfs:label "amino acid biosynthesis phenotype" ;
rdfs:comment "A small molecule biosynthesis phenotype dealing with the metabolic pathways that take precursor molecules and synthesize amino acids by remodeling the carbon skeleton and adding an amino group or sulfur." ;
rdfs:subClassOf obo:OMP_0000310 .
obo:OMP_0007189 a rdfs:Class ;
rdfs:label "altered_relative_to" ;
rdfs:comment "A quality which inheres in a bearer that is altered relative to the quality that inheres in a designated control entity." ;
rdfs:subClassOf obo:PATO_0000068 .
obo:GO_0048646 a rdfs:Class ;
rdfs:label "anatomical structure formation involved in morphogenesis" ;
rdfs:comment "The developmental process pertaining to the initial formation of an anatomical structure from unspecified parts. This process begins with the specific processes that contribute to the appearance of the discrete structure and ends when the structural rudiment is recognizable. An anatomical structure is any biological entity that occupies space and is distinguished from its surroundings. Anatomical structures can be macroscopic such as a carpel, or microscopic such as an acrosome." ;
rdfs:subClassOf obo:GO_0032502 .
obo:OMP_0007059 a rdfs:Class ;
rdfs:label "increased utilization of organic sulfur" ;
rdfs:comment "An organic sulfur source utilization phenotype where the organism has increased ability to use an organic S-containing compound as the source of sulfur relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007086 .
obo:PATO_0001905 a rdfs:Class ;
rdfs:label "has normal numbers of parts of type" ;
rdfs:comment "The bearer of this quality has_part = n, where n is the normal amount for a comparable organism. Note that the bearer of the quality is the whole, not the part." ;
rdfs:subClassOf obo:PATO_0001555 .
obo:OMP_0005325 a rdfs:Class ;
rdfs:label "agar invasion phenotype" ;
rdfs:comment "An organismal growth phenotype relating to the ability of a microbe to penetrate agar media during growth." ;
rdfs:subClassOf obo:OMP_0000174 .
obo:OMP_0006076 a rdfs:Class ;
rdfs:label "resistant to pteridine" ;
rdfs:comment "A pteridine compound resistance phenotype where an organism or cell is resistant to one or more pteridine compounds." ;
rdfs:subClassOf obo:OMP_0007065 .
obo:OMP_0006130 a rdfs:Class ;
rdfs:label "absence of positive supercoiling" ;
rdfs:comment "A DNA supercoiling phenotype where positive supercoiling is absent." ;
rdfs:subClassOf obo:OMP_0000294 .
obo:OMP_0000180 a rdfs:Class ;
rdfs:label "metabolic phenotype" ;
rdfs:comment "A microbial phenotype that deals with the chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances." ;
rdfs:subClassOf obo:OMP_0000000 .
obo:OMP_0000462 a rdfs:Class ;
rdfs:label "presence of an outer membrane" ;
rdfs:comment "An outer membrane phenotype where a cell or cells possess an outer membrane." ;
rdfs:subClassOf obo:OMP_0000461 .
obo:OMP_0007546 a rdfs:Class ;
rdfs:label "increased haploid fruiting" ;
rdfs:comment "An altered haploid fruiting phenotype where the rate, frequency, timing, or extent of the process of haploid fruiting is increased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007545 .
obo:OMP_0007174 a rdfs:Class ;
rdfs:label "increased resistance to host defense peptides" ;
rdfs:comment "An altered host defense peptide resistance phenotype where resistance is increased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007170 .
obo:OMP_0008007 a rdfs:Class ;
rdfs:label "endospore coat phenotype" ;
rdfs:comment "An endospore external encapsulating structure phenotype related to the endospore coat, which is on the exterior of all spores and is composed of many structural proteins that confer additional resistance." ;
rdfs:subClassOf obo:OMP_0007229 .
obo:OMP_0000203 a rdfs:Class ;
rdfs:label "capsule phenotype" ;
rdfs:comment "A cell envelope phenotype where the trait in question is the capsule, a layer of polysaccharide or poly-amino acids surrounding a microbial cell. When present, the capsule is the outermost layer of the cell envelope." ;
rdfs:subClassOf obo:OMP_0000085 .
obo:OMP_0007814 a rdfs:Class ;
rdfs:label "altered cellular pigment accumulation" ;
rdfs:comment "A cellular pigment accumulation phenotype where the rate, extent, or timing of the process of pigment accumulation by a microbial cell or cells is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007811 .
obo:OMP_0007209 a rdfs:Class ;
rdfs:label "presence of RecA-mediated homologous recombination" ;
rdfs:comment "A homologous recombination phenotype where homologous recombination in a cell or cells is mediated by the RecA protein." ;
rdfs:subClassOf obo:OMP_0005051 .
obo:OMP_0000308 a rdfs:Class ;
rdfs:label "over-initiation of DNA replication" ;
rdfs:comment "A DNA replication phenotype where the frequency of initiating new rounds of DNA replication is increased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007147 .
obo:OMP_0005172 a rdfs:Class ;
rdfs:label "delayed cell cycle progression" ;
rdfs:comment "An altered cell cycle phenotype where progression of the cell cycle is delayed relative to a designated control." ;
rdfs:subClassOf obo:OMP_0005136 .
obo:OMP_0007784 a rdfs:Class ;
rdfs:label "altered cellular process during vegetative growth" ;
rdfs:comment "A cellular process phenotype where the rate, frequency, timing, or extent of a specified cellular process during vegetative growth is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007783 .
obo:OMP_0007946 a rdfs:Class ;
rdfs:label "absence of population growth at acidic pH" ;
rdfs:comment "A population growth phenotype where a microbial population isn't able to grow and reproduce at acidic pH (pH< 7)." ;
rdfs:subClassOf obo:OMP_0005008 .
obo:OMP_0000023 a rdfs:Class ;
rdfs:label "periplasmic flagellum/flagella" ;
rdfs:comment "A flagellum distribution phenotype where the flagellum filament of an organism is located in the periplasm and does not extend past the cell envelope." ;
rdfs:subClassOf obo:OMP_0000078 .
obo:OMP_0007099 a rdfs:Class ;
rdfs:label "cylindrical cell shape" ;
rdfs:comment "A cell shape phenotype where a cell has a consistently-sized round cross section. The long axis of the cell is typically longer than the cell diameter." ;
rdfs:subClassOf obo:OMP_0000073 .
obo:OMP_0000040 a rdfs:Class ;
rdfs:label "decreased cell size" ;
rdfs:comment "An altered cell size phenotype where the size of a cell or cells is decreased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007083 .
obo:OMP_0007965 a rdfs:Class ;
rdfs:label "altered cell population growth during nutrient limitation" ;
rdfs:comment "A cell population growth phenotype where the rate or extent of growth of a microbial population under conditions of limitation for an essential nutrient (i.e. conditions where an essential nutrient is present at low concentration) is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007809 , obo:OMP_0007964 .
obo:OMP_0005331 a rdfs:Class ;
rdfs:label "abolished agar invasion" ;
rdfs:comment "A decreased agar invasion phenotype where the ability to invade agar media is abolished." ;
rdfs:subClassOf obo:OMP_0005327 , obo:OMP_0005330 .
obo:OMP_0007062 a rdfs:Class ;
rdfs:label "increased heterocyst formation" ;
rdfs:comment "A heterocyst formation phenotype where the ability to form heterocysts is increased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0006007 .
obo:OMP_0005209 a rdfs:Class ;
rdfs:label "altered adhesion to host" ;
rdfs:comment "An adhesion to host phenotype where the frequency, rate, timing, or extent of attachment of a microbe to a host is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0005206 , obo:OMP_0007351 .
obo:OMP_0006014 a rdfs:Class ;
rdfs:label "increased resistance to lantibiotic" ;
rdfs:comment "A lantibiotic resistance phenotype where resistance is increased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007139 .
obo:OMP_0005034 a rdfs:Class ;
rdfs:label "altered quinolone resistance" ;
rdfs:comment "A quinolone resistance phenotype where resistance to a quinolone compound is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0006029 , obo:OMP_0007134 .
obo:OMP_0005277 a rdfs:Class ;
rdfs:label "abolished resistance to organic heterocyclic compound" ;
rdfs:comment "A decreased resistance to organic heterocyclic compounds phenotype where resistance an organic heterocyclic compound is abolished." ;
rdfs:subClassOf obo:OMP_0005276 , obo:OMP_0005279 .
obo:OMP_0007388 a rdfs:Class ;
rdfs:label "increased pyrimidine requirement" ;
rdfs:comment "An altered pyrimidine requirement phenotype where an organism's requirement for a purine base is increased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007074 , obo:OMP_0007387 .
obo:OMP_0000188 a rdfs:Class ;
rdfs:label "gram positive" ;
rdfs:comment "A gram stain phenotype where a cell or cells retain crystal violet stain when decolorized with an organic solvent such as ethanol." ;
rdfs:subClassOf obo:OMP_0000191 .
obo:OMP_0007512 a rdfs:Class ;
rdfs:label "altered ascospore morphology" ;
rdfs:comment "An ascospore morphology phenotype in which the form and structure of an ascospore is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007411 , obo:OMP_0007511 .
obo:OMP_0005267 a rdfs:Class ;
rdfs:label "presence of endocytosis" ;
rdfs:comment "An endocytosis phenotype where an organism, cell,or cells possess the ability to perform endocytosis." ;
rdfs:subClassOf obo:OMP_0005261 .
obo:OMP_0007570 a rdfs:Class ;
rdfs:label "presence of resistance to oxidative stress" ;
rdfs:comment "A resistance to oxidative stress phenotype where microbes in a population continue to grow and divide when exposed to oxidative stress." ;
rdfs:subClassOf obo:OMP_0007569 .
obo:OMP_0000034 a rdfs:Class ;
rdfs:label "presence of pilus" ;
rdfs:comment "A pilus phenotype where a microorganism produces a pilus or pili in one or more growth conditions." ;
rdfs:subClassOf obo:OMP_0000084 .
obo:OMP_0007401 a rdfs:Class ;
rdfs:label "ascospore formation phenotype" ;
rdfs:comment "A sexual sporulation phenotype related to the formation of an ascospore, a dormant, highly resistant, sexual spore with a thick wall that forms within the mother cell. Ascospores are generally found in clusters of four or eight spores within a single mother cell, the ascus, and are characteristic of the ascomycete fungi (phylum Ascomycota)." ;
rdfs:subClassOf obo:OMP_0007405 .
obo:GO_0010605 a rdfs:Class ;
rdfs:label "negative regulation of macromolecule metabolic process" ;
rdfs:comment "Any process that decreases the frequency, rate or extent of the chemical reactions and pathways involving macromolecules, any molecule of high relative molecular mass, the structure of which essentially comprises the multiple repetition of units derived, actually or conceptually, from molecules of low relative molecular mass." ;
rdfs:subClassOf obo:GO_0009892 , obo:GO_0060255 .
obo:OMP_0000246 a rdfs:Class ;
rdfs:label "presence of nanotubes" ;
rdfs:comment "A nanotube phenotype where a cell or cells have the ability to produce nanotubes." ;
rdfs:subClassOf obo:OMP_0000175 .
obo:OMP_0000257 a rdfs:Class ;
rdfs:label "decreased cell division ratio variability" ;
rdfs:subClassOf obo:OMP_0000251 .
obo:OMP_0007985 a rdfs:Class ;
rdfs:label "decreased cell area" ;
rdfs:subClassOf obo:OMP_0007983 .
obo:OMP_0007412 a rdfs:Class ;
rdfs:label "mating phenotype" ;
rdfs:comment "A sexual reproduction phenotype that affects conjugation with cellular fusion, which is the union of cellular and genetic information from compatible mating types." ;
rdfs:subClassOf obo:OMP_0007406 .
obo:OMP_0005023 a rdfs:Class ;
rdfs:label "presence of an SOS response" ;
rdfs:comment "An SOS response phenotype where a cell or cells exhibit an SOS response." ;
rdfs:subClassOf obo:OMP_0005017 .
obo:OMP_0007127 a rdfs:Class ;
rdfs:label "altered taxis" ;
rdfs:comment "A taxis phenotype where the frequency, rate, timing, or extent of directed movement of a microbe in response to an external stimulus is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0000004 , obo:OMP_0007085 .
obo:OMP_0006018 a rdfs:Class ;
rdfs:label "altered aminopyrimidine resistance" ;
rdfs:comment "An aminopyrimidine resistance phenotype where resistance to an aminopyrimidine compound is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0000331 , obo:OMP_0007134 .
obo:PATO_0001442 a rdfs:Class ;
rdfs:label "wholeness" ;
rdfs:comment "A structural quality inhering in a bearer by virtue of whether the bearer includes all its components." ;
rdfs:subClassOf obo:PATO_0000141 .
obo:OMP_0006025 a rdfs:Class ;
rdfs:label "altered chloramphenicol resistance" ;
rdfs:comment "A chloramphenicol resistance phenotype where resistance to chloramphenicol is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0006066 , obo:OMP_0007134 .
obo:OMP_0007849 a rdfs:Class ;
rdfs:label "absence of organic carbon source utilization" ;
rdfs:subClassOf obo:OMP_0006023 .
obo:OMP_0005288 a rdfs:Class ;
rdfs:label "colonization of tissue in an immunocompromised host phenotype" ;
rdfs:comment "A colonization of a host phenotype that deals with the ability of a microbe to colonize tissue of an immunocompromised host." ;
rdfs:subClassOf obo:OMP_0005281 .
obo:OMP_0007996 a rdfs:Class ;
rdfs:label "altered cell surface area variability" ;
rdfs:subClassOf obo:OMP_0007918 , obo:OMP_0007993 .
obo:CHEBI_50906 a rdfs:Class ;
rdfs:label "role" ;
rdfs:comment "A role is a particular behaviour which a material entity may exhibit." .
obo:OMP_0007243 a rdfs:Class ;
rdfs:label "altered bacteriophage sensitivity" ;
rdfs:comment "A bacteriophage sensitivity phenotype where sensitivity of a bacterial cell or cells to a bacteriophage is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007237 , obo:OMP_0007242 .
obo:OMP_0007286 a rdfs:Class ;
rdfs:label "presence of laccase activity" ;
rdfs:comment "A laccase phenotype where an organism exhibits laccase activity." ;
rdfs:subClassOf obo:OMP_0007285 .
obo:PATO_0002304 a rdfs:Class ;
rdfs:label "increased process quality" ;
rdfs:comment "A quality of a process that has a value that is increased compared to normal or average." ;
rdfs:subClassOf obo:PATO_0001236 , obo:PATO_0002300 .
obo:OMP_0000359 a rdfs:Class ;
rdfs:label "cell diameter variability phenotype" ;
rdfs:subClassOf obo:OMP_0007917 .
obo:PATO_0001404 a rdfs:Class ;
rdfs:label "nucleate quality" ;
rdfs:comment "A cellular quality inhering in a bearer by virtue of bearer's number of nuclei." ;
rdfs:subClassOf obo:PATO_0001396 .
obo:OMP_0005240 a rdfs:Class ;
rdfs:label "presence of golgi apparatus" ;
rdfs:comment "A golgi apparatus phenotype where a cell or cells exhibit a golgi apparatus." ;
rdfs:subClassOf obo:OMP_0005237 .
obo:OMP_0007803 a rdfs:Class ;
rdfs:label "decreased vegetative cell population growth rate" ;
rdfs:subClassOf obo:OMP_0007801 .
obo:OMP_0000140 a rdfs:Class ;
rdfs:label "nucleoid spacing" ;
rdfs:comment "A nucleoid phenotype that describes the distribution of within a cell or cells." ;
rdfs:subClassOf obo:OMP_0000150 .
obo:GO_0006928 a rdfs:Class ;
rdfs:label "cellular component movement" ;
rdfs:comment "The directed, self-propelled movement of a cellular component without the involvement of an external agent such as a transporter or a pore." ;
rdfs:subClassOf obo:GO_0044763 .
obo:OMP_0005262 a rdfs:Class ;
rdfs:label "altered endocytosis" ;
rdfs:comment "An endocytosis phenotype where the frequency, rate, timing, or extent of the process of endocytosis is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0005261 .
obo:OMP_0007340 a rdfs:Class ;
rdfs:label "altered nuclear morphology" ;
rdfs:comment "A nuclear morphology phenotype where the size, shape, or appearance of the nucleus is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007103 , obo:OMP_0007339 .
obo:OMP_0007969 a rdfs:Class ;
rdfs:label "presence of organic nitrogen source utilization" ;
rdfs:subClassOf obo:OMP_0007014 .
obo:OMP_0008000 a rdfs:Class ;
rdfs:label "spore morphology phenotype" ;
rdfs:comment "A microbial phenotype that is related to the form and structure of a spore or spores produced by a microbe." ;
rdfs:subClassOf obo:OMP_0000071 .
obo:OMP_0007655 a rdfs:Class ;
rdfs:label "abolished resistance to mitomycin" ;
rdfs:comment "A decreased resistance to mitomycin phenotype where resistance to a mitomycin is abolished." ;
rdfs:subClassOf obo:OMP_0007651 , obo:OMP_0007654 .
obo:OMP_0007304 a rdfs:Class ;
rdfs:label "altered cell staining phenotype" ;
rdfs:comment "A cell staining phenotype that is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0000214 , obo:OMP_0007085 .
obo:OMP_0007210 a rdfs:Class ;
rdfs:label "presence of lambda Red-mediated recombination" ;
rdfs:comment "A homologous recombination phenotype where homologous recombination in a cell or cells is mediated by the bacteriophage lambda Red proteins (bet-gam-exo)." ;
rdfs:subClassOf obo:OMP_0005051 .
obo:GO_0044237 a rdfs:Class ;
rdfs:label "cellular metabolic process" ;
rdfs:comment "The chemical reactions and pathways by which individual cells transform chemical substances." ;
rdfs:subClassOf obo:GO_0008152 , obo:GO_0009987 .
obo:OMP_0007049 a rdfs:Class ;
rdfs:label "utilization of inorganic phosphorus phenotype" ;
rdfs:comment "An inorganic phosphorus source utilization phenotype where an organism can use an inorganic P-containing compound as the source of phosphorus." .
obo:OMP_0000152 a rdfs:Class ;
rdfs:label "doublet nucleoid" ;
rdfs:comment "A nucleoid shape phenotype where the nucleoid isolated from a cell is shaped like a dumbbell." ;
rdfs:subClassOf obo:OMP_0000136 .
obo:OMP_0000043 a rdfs:Class ;
rdfs:label "nucleoid number phenotype" ;
rdfs:comment "A nucleoid phenotype dealing with the number of nucleoid regions in the cell." ;
rdfs:subClassOf obo:OMP_0000150 .
obo:OMP_0000170 a rdfs:Class ;
rdfs:label "decreased cell circularity variability" ;
rdfs:subClassOf obo:OMP_0000138 .
obo:OMP_0005112 a rdfs:Class ;
rdfs:label "response to SDS-EDTA stress phenotype" ;
rdfs:comment "A stress response phenotype dealing with the response to exposure to SDS-EDTA." ;
rdfs:subClassOf obo:OMP_0000173 .
obo:OMP_0005056 a rdfs:Class ;
rdfs:label "decreased frequency of site-specific recombination" ;
rdfs:comment "A site specific recombination phenotype where site specific recombination is decreased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0006005 .
obo:OMP_0006101 a rdfs:Class ;
rdfs:label "abolished caffeine resistance" ;
rdfs:comment "A caffeine resistance phenotype where resistance to caffeine is abolished." ;
rdfs:subClassOf obo:OMP_0000458 , obo:OMP_0000460 .
obo:OMP_0007333 a rdfs:Class ;
rdfs:label "autophagy phenotype" ;
rdfs:comment "A cellular process phenotype related to the process of autophagy in which cells digest parts of their own cytoplasm." ;
rdfs:subClassOf obo:OMP_0007332 .
obo:OMP_0007649 a rdfs:Class ;
rdfs:label "mitomycin resistance phenotype" ;
rdfs:comment "An antimicrobial agent resistance phenotype related to resistance or sensitivity to a mitomycin. Mitomycins are a family of aziridine-containing natural products isolated from Streptomyces." ;
rdfs:subClassOf obo:OMP_0000274 .
obo:OMP_0007589 a rdfs:Class ;
rdfs:label "abolished resistance to cold shock" ;
rdfs:comment "A decreased resistance to cold phenotype where the resistance of microbes in a population to temperature below the optimal growth temperature is abolished." ;
rdfs:subClassOf obo:OMP_0007581 , obo:OMP_0007588 .
obo:PATO_0002258 a rdfs:Class ;
rdfs:label "pointed" ;
rdfs:comment "A shape quality inhering in a bearer by virtue of the bearer's having a point." ;
rdfs:subClassOf obo:PATO_0001419 .
obo:OMP_0007795 a rdfs:Class ;
rdfs:label "vegetative cell population growth phenotype" ;
rdfs:comment "A cell population phenotype that affects the rate or extent cell population growth in the vegetative growth phase of the life cycle." ;
rdfs:subClassOf obo:OMP_0007794 .
obo:OMP_0007190 a rdfs:Class ;
rdfs:label "altered dinitrogen utilization" ;
rdfs:comment "A dinitrogen utilization phenotype where the ability to utilize dinitrogen is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0006030 , obo:OMP_0007905 .
obo:OMP_0000051 a rdfs:Class ;
rdfs:label "decreased cell circularity" ;
rdfs:subClassOf obo:OMP_0000044 .
obo:OMP_0007423 a rdfs:Class ;
rdfs:label "decreased budding frequency" ;
rdfs:comment "A decreased budding phenotype where the fraction of budded cells (budding index) in a proliferating cell population is decreased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0006006 .
obo:OMP_0007381 a rdfs:Class ;
rdfs:label "resistant to benzamides" ;
rdfs:comment "A benzamides resistance phenotype where an organism, cell, or cells is resistant to a benzamide." ;
rdfs:subClassOf obo:OMP_0007380 .
obo:OMP_0005318 a rdfs:Class ;
rdfs:label "absence of colonization of tissue in an immunocompromised rabbit" ;
rdfs:comment "A colonization of tissue in an immunocompromised rabbit phenotype a microbe is unable to colonize the tissue of an immunocompromised rabbit." ;
rdfs:subClassOf obo:OMP_0005316 .
obo:OMP_0000279 a rdfs:Class ;
rdfs:label "increased cell perimeter length variability" ;
rdfs:subClassOf obo:OMP_0000277 .
obo:OMP_0005385 a rdfs:Class ;
rdfs:label "presence of normal tail" ;
rdfs:comment "A tail length phenotype ranging from 18 nm to 109 nm." ;
rdfs:subClassOf obo:OMP_0005383 .
obo:OMP_0007715 a rdfs:Class ;
rdfs:label "altered vegetative cell morphology" ;
rdfs:comment "An altered cell morphology phenotype where the morphology (i.e., size, shape, and structure) of a cell in the vegetative growth phase of the life cycle is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007103 .
obo:GO_0018130 a rdfs:Class ;
rdfs:label "heterocycle biosynthetic process" ;
rdfs:comment "The chemical reactions and pathways resulting in the formation of heterocyclic compounds, those with a cyclic molecular structure and at least two different atoms in the ring (or rings)." ;
rdfs:subClassOf obo:GO_0044249 , obo:GO_0046483 .
obo:OMP_0007976 a rdfs:Class ;
rdfs:label "altered cell length variability" ;
rdfs:subClassOf obo:OMP_0000281 , obo:OMP_0007918 .
obo:OMP_0005245 a rdfs:Class ;
rdfs:label "increased filamentous growth" ;
rdfs:comment "An altered filamentous growth phenotype where the frequency, rate, or extent of filamentous growth is increased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0005244 .
obo:OMP_0000333 a rdfs:Class ;
rdfs:label "cell circularity phenotype" ;
rdfs:comment "4 pi area/(perimeter)^2 or 2 pi area/(perimeter)^2? defined differently in two places in paper" ;
rdfs:subClassOf obo:OMP_0000073 .
obo:OMP_0005295 a rdfs:Class ;
rdfs:label "colonization of mouse tissue" ;
rdfs:comment "A colonization of host tissue phenotype related to the ability of a microbe to colonize mouse tissue." ;
rdfs:subClassOf obo:OMP_0005281 .
obo:OMP_0005374 a rdfs:Class ;
rdfs:label "increased osmotaxis" ;
rdfs:comment "An altered osmotaxis phenotype where osmotaxis by a motile microbe is increased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0005371 .
obo:OMP_0006044 a rdfs:Class ;
rdfs:label "decreased resistance to beta-lactam" ;
rdfs:comment "A beta-lactam compound resistance phenotype where resistance to a beta-lactam compound is decreased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0006021 .
obo:PATO_0000694 a rdfs:Class ;
rdfs:label "premature" ;
rdfs:comment "A quality of a process which starts earlier than the natural start time or the reference process." ;
rdfs:subClassOf obo:PATO_0002325 .
obo:OMP_0007661 a rdfs:Class ;
rdfs:label "increased level of cellular reactive oxygen species" ;
rdfs:comment "An altered level of cellular reactive oxygen species where the amount of reactive oxygen species (ROS) measured in a cell is increased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007660 .
obo:OMP_0007823 a rdfs:Class ;
rdfs:label "not resistant to nitrofuran" ;
rdfs:comment "A nitrofuran resistance phenotype where a microbe is sensitive to one or more nitrofuran compounds." ;
rdfs:subClassOf obo:OMP_0007821 .
obo:OMP_0005123 a rdfs:Class ;
rdfs:label "altered resistance to gamma-ray radiation" ;
rdfs:comment "A resistance to gamma-ray radiation phenotype where the resistance or sensitivity that microbes in a population show when exposed to gamma-ray radiation is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0005085 , obo:OMP_0007594 .
obo:OMP_0007221 a rdfs:Class ;
rdfs:label "abolished resistance to rifamycin" ;
rdfs:comment "A decreased resistance to rifamycin phenotype where resistance to one or more rifamycins is abolished." ;
rdfs:subClassOf obo:OMP_0007217 , obo:OMP_0007219 .
obo:OMP_0006141 a rdfs:Class ;
rdfs:label "abolished resistance to beta-lactam" ;
rdfs:comment "A decreased resistance to beta-lactam phenotype where resistance to beta-lactam is abolished." ;
rdfs:subClassOf obo:OMP_0006044 , obo:OMP_0006046 .
obo:OMP_0000231 a rdfs:Class ;
rdfs:label "growth into medium" ;
rdfs:comment "A colony elevation phenotype characterized by growth into the medium not above it." ;
rdfs:subClassOf obo:OMP_0000104 .
obo:OMP_0000145 a rdfs:Class ;
rdfs:label "nucleoid localization" ;
rdfs:comment "A nucleoid phenotype that describes the location of the nucleoid within a cell or cells." ;
rdfs:subClassOf obo:OMP_0000150 .
obo:OMP_0007370 a rdfs:Class ;
rdfs:label "decreased resistance to an acridine" ;
rdfs:comment "An altered resistance to an acridine phenotype where resistance is decreased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007368 .
obo:OMP_0007704 a rdfs:Class ;
rdfs:label "abolished cell population viability" ;
rdfs:subClassOf obo:OMP_0007702 .
obo:OMP_0007695 a rdfs:Class ;
rdfs:label "increased vegetative cell growth" ;
rdfs:comment "An altered vegetative cell growth phenotype in which the rate, timing, or extent of growth of the cell in the vegetative growth phase of the life cycle is increased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007694 .
obo:OMP_0007315 a rdfs:Class ;
rdfs:label "population morphology phenotype" ;
rdfs:comment "A microbial phenotype related to the appearance of a microbial population, such as a colony, liquid culture, or biofilm." ;
rdfs:subClassOf obo:OMP_0007006 .
obo:OMP_0007549 a rdfs:Class ;
rdfs:label "altered biological process phenotype" ;
rdfs:comment "This term was made obsolete because it is a duplicate of OMP:0007351." .
obo:OMP_0007644 a rdfs:Class ;
rdfs:label "decreased population growth yield" ;
rdfs:comment "An altered population growth yield phenotype where the number of microbes produced per amount of nutrient(s) consumed is decreased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007642 .
obo:OMP_0005303 a rdfs:Class ;
rdfs:label "presence of colonization of tissue in an immunocompromised mouse" ;
rdfs:comment "A colonization of tissue in an immunocompromised mouse phenotype where a microbe is able to colonize the tissue of an immunocompromised mouse." ;
rdfs:subClassOf obo:OMP_0005302 .
obo:OMP_0007088 a rdfs:Class ;
rdfs:label "altered heme utilization phenotype" ;
rdfs:comment "A heme utilization phenotype altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0000451 .
obo:OMP_0007604 a rdfs:Class ;
rdfs:label "absence of DNA breaks" ;
rdfs:comment "A DNA break phenotype where breaks in chromosomal DNA don't occur." ;
rdfs:subClassOf obo:OMP_0007602 .
obo:PATO_0002007 a rdfs:Class ;
rdfs:label "convex 3-D shape" ;
rdfs:comment "A complete three dimensional shape in which for every line connecting pair of points on the object is within the object. Or: a shape lacking cavities. Contrast: concave." ;
rdfs:subClassOf obo:PATO_0002266 .
obo:GO_0034641 a rdfs:Class ;
rdfs:label "cellular nitrogen compound metabolic process" ;
rdfs:comment "The chemical reactions and pathways involving various organic and inorganic nitrogenous compounds, as carried out by individual cells." ;
rdfs:subClassOf obo:GO_0006807 , obo:GO_0044237 .
obo:OMP_0005082 a rdfs:Class ;
rdfs:label "response to thermotolerance stress phenotype" ;
rdfs:comment "A stress response phenotype dealing with the resistance response to normally lethal high temperature levels." ;
rdfs:subClassOf obo:OMP_0000173 .
obo:OMP_0000151 a rdfs:Class ;
rdfs:label "entire margin" ;
rdfs:comment "A colony margin phenotype characterized by smooth growth, with no projections along the edge." ;
rdfs:subClassOf obo:OMP_0000149 .
obo:OMP_0000129 a rdfs:Class ;
rdfs:label "cuboidal cell shape" ;
rdfs:comment "A cell shape phenotype where a cell has a cube-like shape; there are six sides and the width is approximately equal to the height of the cell." ;
rdfs:subClassOf obo:OMP_0000073 .
obo:OMP_0000225 a rdfs:Class ;
rdfs:label "carbon dioxide production" ;
rdfs:comment "A chemical production phenotype where carbon dioxide is produced." ;
rdfs:subClassOf obo:OMP_0000192 .
obo:OMP_0000248 a rdfs:Class ;
rdfs:label "biofilm architecture phenotype" ;
rdfs:comment "A biofilm phenotype dealing with the structural formation of the biofilm." ;
rdfs:subClassOf obo:OMP_0000176 .
obo:OMP_0007909 a rdfs:Class ;
rdfs:label "resistant to a chelator" ;
rdfs:subClassOf obo:OMP_0007908 .
obo:OMP_0005256 a rdfs:Class ;
rdfs:label "absence of microaerophilic growth" ;
rdfs:comment "A population growth range phenotype in which a microbial population cannot grow in a microaerophilic environment." ;
rdfs:subClassOf obo:OMP_0005254 .
obo:OMP_0008040 a rdfs:Class ;
rdfs:label "increased natural competence" ;
rdfs:comment "An altered natural competence phenotype where the where the rate, frequency, timing, or extent of natural competence is increased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0008037 .
obo:OMP_0007192 a rdfs:Class ;
rdfs:label "effect of non-nutrient environmental factors on population growth phenotype" ;
rdfs:comment "A population growth phenotype related to how non-nutrient environmental factors affect growth of a microbial population." ;
rdfs:subClassOf obo:OMP_0007167 .
obo:GO_0006935 a rdfs:Class ;
rdfs:label "chemotaxis" ;
rdfs:comment "The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis)." ;
rdfs:subClassOf obo:GO_0042221 , obo:GO_0042330 .
obo:PATO_0000146 a rdfs:Class ;
rdfs:label "temperature" ;
rdfs:comment "A physical quality of the thermal energy of a system." ;
rdfs:subClassOf obo:PATO_0001018 .
obo:OMP_0007015 a rdfs:Class ;
rdfs:label "altered nutrient import phenotype" ;
rdfs:comment "A nutrient uptake phenotype that is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007007 , obo:OMP_0007104 .
obo:OMP_0007615 a rdfs:Class ;
rdfs:label "decreased frequency of single-strand DNA breaks" ;
rdfs:comment "A decreased frequency of DNA breaks phenotype where the frequency of single-strand breaks in chromosomal DNA is decreased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007607 .
obo:OMP_0000304 a rdfs:Class ;
rdfs:label "increased substrate binding" ;
rdfs:comment "A substrate binding phenotype where a protein has increased affinity for a substrate." .
obo:PATO_0001367 a rdfs:Class ;
rdfs:label "lobate" ;
rdfs:comment "A surface feature shape quality inhering in a bearer by virtue of the bearer's having deeply undulating edges forming lobes." ;
rdfs:subClassOf obo:PATO_0001925 .
obo:OMP_0000054 a rdfs:Class ;
rdfs:label "absence of positive chemotaxis" ;
rdfs:comment "An absence of chemotaxis phenotype where an organism doesn't display directed movement toward a higher concentration of a specific chemical." ;
rdfs:subClassOf obo:OMP_0000097 .
obo:OMP_0007501 a rdfs:Class ;
rdfs:label "abolished resistance to an epoxide" ;
rdfs:comment "A decreased resistance to an epoxide phenotype where resistance to an epoxide is abolished." ;
rdfs:subClassOf obo:OMP_0007497 , obo:OMP_0007500 .
obo:OMP_0000376 a rdfs:Class ;
rdfs:label "acid tolerance response phenotype" ;
rdfs:comment "A response to stress phenotype related to how exposure of a microbial cell or cells to a small decrease in pH affects" ;
rdfs:subClassOf obo:OMP_0000173 .
obo:OMP_0005146 a rdfs:Class ;
rdfs:label "decreased vacuolar size" ;
rdfs:comment "An altered vacuolar morphology phenotype where the size of the vacuole is decreased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0005145 .
obo:OMP_0007048 a rdfs:Class ;
rdfs:label "increased utilization of inorganic phosphorus source" ;
rdfs:comment "An inorganic phosphorus source utilization phenotype where the ability to use an inorganic P-containing compound as the source of phosphorus is increased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007213 .
obo:OMP_0007163 a rdfs:Class ;
rdfs:label "transcription regulation phenotype" ;
rdfs:comment "A gene expression phenotype that affects the regulation of DNA-dependent or RNA-dependent transcription." ;
rdfs:subClassOf obo:OMP_0007162 .
obo:OMP_0006011 a rdfs:Class ;
rdfs:label "lantibiotic resistance phenotype" ;
rdfs:comment "A bacteriocin resistance phenotype related to resistance or sensitivity to peptides that contain the thioether amino acids lanthionine or methyllanthionine, and the unsaturated amino acids dehydroalanine and 2-aminoisobutyric acid." ;
rdfs:subClassOf obo:OMP_0006027 .
obo:OMP_0000365 a rdfs:Class ;
rdfs:label "cell circularity variability phenotype" ;
rdfs:subClassOf obo:OMP_0007917 .
obo:OMP_0005379 a rdfs:Class ;
rdfs:label "increased sexual sporulation frequency" ;
rdfs:comment "An altered sexual sporulation frequency phenotype where the fraction of cells in a population that undergo meiosis and forms spores under sporulation-inducing conditions is increased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0005378 .
obo:OMP_0006148 a rdfs:Class ;
rdfs:label "abolished stress-induced mutagenesis" ;
rdfs:comment "A decreased stress-induced mutagenesis phenotype where stress-induced mutagenesis is abolished." ;
rdfs:subClassOf obo:OMP_0005031 , obo:OMP_0005033 .
obo:OMP_0007318 a rdfs:Class ;
rdfs:label "abolished ferric reductase activity" ;
rdfs:comment "A decreased ferric reductase activity phenotype where ferric reductase activity is abolished." ;
rdfs:subClassOf obo:OMP_0005149 , obo:OMP_0005151 .
obo:OMP_0007291 a rdfs:Class ;
rdfs:label "abolished laccase activity" ;
rdfs:comment "A decreased laccase activity phenotype where laccase activity is abolished." ;
rdfs:subClassOf obo:OMP_0007287 , obo:OMP_0007290 .
obo:OMP_0006108 a rdfs:Class ;
rdfs:label "abolished chemotaxis" ;
rdfs:comment "A decreased chemotaxis phenotype where chemotaxis by a motile microbe is abolished." ;
rdfs:subClassOf obo:OMP_0000097 , obo:OMP_0000503 .
obo:OMP_0007808 a rdfs:Class ;
rdfs:label "decreased cell population viability upon nitrogen starvation" ;
rdfs:comment "An altered cell population viability phenotype where the proportion of cells that survive nitrogen starvation is decreased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007807 .
obo:OMP_0007993 a rdfs:Class ;
rdfs:label "altered cell surface area" ;
rdfs:subClassOf obo:OMP_0000326 , obo:OMP_0007083 .
obo:OMP_0000204 a rdfs:Class ;
rdfs:label "presence of capsule" ;
rdfs:comment "A capsule phenotype where a cell or cells have a capsule." ;
rdfs:subClassOf obo:OMP_0000203 .
obo:OMP_0007940 a rdfs:Class ;
rdfs:label "increased spontaneous diploidization in a vegetative microbial cell" ;
rdfs:comment "An altered cell phenotype observed in the vegetative phase of the life cycle in which haploid microbial cells spontaneously form cells with diploid DNA content at a higher frequency than the designated control." ;
rdfs:subClassOf obo:OMP_0007939 .
obo:PATO_0000141 a rdfs:Class ;
rdfs:label "structure" ;
rdfs:comment "A morphology quality inhering in a bearer by virtue of the bearer's relative position, shape, arrangements and connectivity of an organism's various parts; the pattern underlying its form." ;
rdfs:subClassOf obo:PATO_0000051 .
obo:OMP_0007061 a rdfs:Class ;
rdfs:label "iron source utilization phenotype" ;
rdfs:comment "A nutrient utilization phenotype where the nutrient is being used as a source of iron." ;
rdfs:subClassOf obo:OMP_0006022 .
obo:OMP_0007339 a rdfs:Class ;
rdfs:label "nuclear morphology phenotype" ;
rdfs:comment "A cell morphology phenotype related to the size, shape, or appearance of the nucleus." ;
rdfs:subClassOf obo:OMP_0000071 .
obo:OMP_0005092 a rdfs:Class ;
rdfs:label "decreased resistance to oxidative stress" ;
rdfs:comment "An altered oxidative stress phenotype where resistance of microbes in a population to an oxidative stress is decreased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0005122 .
obo:OMP_0000281 a rdfs:Class ;
rdfs:label "altered cell population phenotype" ;
rdfs:subClassOf obo:OMP_0007698 , obo:OMP_0007931 .
obo:OMP_0000107 a rdfs:Class ;
rdfs:label "colony pigmentation phenotype" ;
rdfs:comment "A colony morphology phenotype related to the color of a colony or colonies." ;
rdfs:subClassOf obo:OMP_0000108 .
obo:GO_0044699 a rdfs:Class ;
rdfs:label "single-organism process" ;
rdfs:comment "A biological process that involves only one organism." ;
rdfs:subClassOf obo:GO_0008150 .
obo:OMP_0005143 a rdfs:Class ;
rdfs:label "decreased resistance to killing by host" ;
rdfs:comment "An altered resistance to killing by host phenotype where the ability of a microbe to resist killing by a host is decreased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0005141 .
obo:OMP_0000226 a rdfs:Class ;
rdfs:label "increased cell aspect ratio" ;
rdfs:comment "An altered cell aspect ratio phenotype where the cell aspect ratio (cell diameter/cell length) of a microbial cell is increased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0000193 .
obo:OMP_0000354 a rdfs:Class ;
rdfs:label "altered timing of cell constriction" ;
rdfs:subClassOf obo:OMP_0000352 .
obo:OMP_0007036 a rdfs:Class ;
rdfs:label "increased organic nitrogen source utilization" ;
rdfs:comment "An altered nitrogen source utilization phenotype where the ability to use an organic N-containing compound as the source of nitrogen is increased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007906 .
obo:OMP_0007358 a rdfs:Class ;
rdfs:label "nucleoside resistance phenotype" ;
rdfs:comment "An antimicrobial agent resistance phenotype relating to resistance or sensitivity to a compound that is a nucleoside: an N-glycosyl compound that has both a nucleobase, normally adenine, guanine, xanthine, thymine, cytosine or uracil, and either a ribose or deoxyribose as functional parents." ;
rdfs:subClassOf obo:OMP_0000274 .
obo:OMP_0000247 a rdfs:Class ;
rdfs:label "absence of nanotubes" ;
rdfs:comment "A nanotube phenotype where a cell or cells lack the ability to produce nanotubes." ;
rdfs:subClassOf obo:OMP_0000175 .
obo:OMP_0007018 a rdfs:Class ;
rdfs:label "does not require growth factor(s)" ;
rdfs:comment "A growth factor requirement phenotype where an organism can synthesize all organic compounds essential for its growth from a single carbon substrate and inorganic chemicals." ;
rdfs:subClassOf obo:OMP_0007044 .
obo:OMP_0005094 a rdfs:Class ;
rdfs:label "decreased resistance to gamma-ray radiation" ;
rdfs:comment "An altered resistance to gamma-ray radiation phenotype where the resistance of microbes in a population to gamma-rays is decreased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0005123 .
obo:PATO_0002213 a rdfs:Class ;
rdfs:label "obclavate" ;
rdfs:comment "A concave 3-D shape quality inhering in a bearer by virtue of the bearer's shape being inversely clavate." ;
rdfs:subClassOf obo:PATO_0002008 .
obo:OMP_0007987 a rdfs:Class ;
rdfs:label "decreased cell area variability" ;
rdfs:subClassOf obo:OMP_0007984 .
obo:OMP_0007927 a rdfs:Class ;
rdfs:label "decreased anaerobic population growth" ;
rdfs:comment "An altered anaerobic population growth phenotype where growth of a microbial population in the absence of O2 is decreased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0005192 .
obo:OMP_0007411 a rdfs:Class ;
rdfs:label "altered spore morphology" ;
rdfs:comment "A spore morphology phenotype where the morphology of spores produced by a microbe is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007103 , obo:OMP_0008000 .
obo:OMP_0005329 a rdfs:Class ;
rdfs:label "increased agar invasion" ;
rdfs:comment "An altered agar invasion phenotype where the frequency, rate, timing, or extent of agar invasion is increased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0005328 .
obo:OMP_0007126 a rdfs:Class ;
rdfs:label "viscous colony consistency" ;
rdfs:comment "A colony consistency phenotype where a colony or colonies have a sticky or gummy consistency." ;
rdfs:subClassOf obo:OMP_0000229 .
obo:PATO_0002052 a rdfs:Class ;
rdfs:label "decreased occurrence" ;
rdfs:comment "An occurrence which is relatively low." ;
rdfs:subClassOf obo:PATO_0000057 , obo:PATO_0002302 .
obo:OMP_0007463 a rdfs:Class ;
rdfs:label "presence of flocculation" ;
rdfs:comment "A flocculation phenotype where cells or organisms in liquid culture aggregate to form clumps of many cells." ;
rdfs:subClassOf obo:OMP_0000178 .
obo:OMP_0007448 a rdfs:Class ;
rdfs:label "abolished lethality in mice" ;
rdfs:comment "A decreased lethality phenotype where the ability of an infectious microbe to cause death of its murine host is abolished." ;
rdfs:subClassOf obo:OMP_0007399 , obo:OMP_0007446 .
obo:OMP_0000118 a rdfs:Class ;
rdfs:label "streptococcus" ;
rdfs:comment "A cell arrangement phenotype where chains of coccus cells arise from division events in one plane." ;
rdfs:subClassOf obo:OMP_0000003 .
obo:OMP_0005225 a rdfs:Class ;
rdfs:label "delayed cell fusion" ;
rdfs:comment "An altered cell fusion phenotype where the occurrence of cell fusion is delayed relative to a designated control." ;
rdfs:subClassOf obo:OMP_0005221 .
obo:OMP_0000237 a rdfs:Class ;
rdfs:label "colony odor phenotype" ;
rdfs:comment "A morphology phenotype dealing with the smell a colony produces." ;
rdfs:subClassOf obo:OMP_0000100 .
obo:OMP_0007131 a rdfs:Class ;
rdfs:label "altered differential test result" ;
rdfs:comment "A differential media phenotype where the results of a differential test are altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007085 , obo:OMP_0007130 .
obo:OMP_0007633 a rdfs:Class ;
rdfs:label "cellular physical quality phenotype" ;
rdfs:comment "A cell phenotype that affects any physical object quality of a microbial cell, such as morphology, number, location, etc., of a cell or a cellular component." ;
rdfs:subClassOf obo:OMP_0007632 .
obo:PATO_0002051 a rdfs:Class ;
rdfs:label "increased occurrence" ;
rdfs:comment "An occurrence which is relatively high." ;
rdfs:subClassOf obo:PATO_0000057 , obo:PATO_0002304 .
obo:OMP_0007998 a rdfs:Class ;
rdfs:label "increased cell surface area variability" ;
rdfs:subClassOf obo:OMP_0007996 .
obo:GO_0009059 a rdfs:Class ;
rdfs:label "macromolecule biosynthetic process" ;
rdfs:comment "The chemical reactions and pathways resulting in the formation of a macromolecule, any molecule of high relative molecular mass, the structure of which essentially comprises the multiple repetition of units derived, actually or conceptually, from molecules of low relative molecular mass." ;
rdfs:subClassOf obo:GO_0043170 , obo:GO_1901576 .
obo:OMP_0005278 a rdfs:Class ;
rdfs:label "increased resistance to organic heterocyclic compound" ;
rdfs:comment "An altered organic heterocyclic compound resistance phenotype where the frequency, rate, timing, or extent of resistance to an organic heterocyclic compound is increased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0005275 .
obo:OMP_0000084 a rdfs:Class ;
rdfs:label "pilus morphology phenotype" ;
rdfs:comment "A cell projection phenotype morphology where the structure in question is a proteinaceous hair-like appendage on the surface of a microbial cell." ;
rdfs:subClassOf obo:OMP_0000083 .
obo:OMP_0007629 a rdfs:Class ;
rdfs:label "abolished chitin in cell wall" ;
rdfs:comment "A decreased cell wall chitin level phenotype where the amount of chitin in the cell wall is abolished." ;
rdfs:subClassOf obo:OMP_0007628 .
obo:OMP_0005016 a rdfs:Class ;
rdfs:label "halophilic growth" ;
rdfs:comment "A solute and water activity phenotype where growth and proliferation requires high levels of sodium chloride, usually above or about 0.2 M." ;
rdfs:subClassOf obo:OMP_0005013 .
obo:OMP_0007572 a rdfs:Class ;
rdfs:label "altered resistance to stress" ;
rdfs:comment "A resistance to stress phenotype where the resistance or sensitivity that microbes in a population show when exposed to a stress is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007157 , obo:OMP_0007568 .
obo:OMP_0007516 a rdfs:Class ;
rdfs:label "population growth in high osmolarity phenotype" ;
rdfs:comment "A population growth phenotype relating to the vegetative growth of a microbial population in conditions of high osmolarity, which refers to osmotic conditions where the osmolarity of the environment is higher than the osmolarity that allows for optimal population growth. Population growth may refer to growth rate, growth yield, or both." ;
rdfs:subClassOf obo:OMP_0005013 .
obo:OMP_0005189 a rdfs:Class ;
rdfs:label "anaerobic population growth phenotype" ;
rdfs:comment "A population growth range phenotype related to whether a microbial population can grow in the absence of oxygen." ;
rdfs:subClassOf obo:OMP_0000039 .
obo:OMP_0007627 a rdfs:Class ;
rdfs:label "increased cell wall chitin level" ;
rdfs:comment "An altered cell wall chitin level phenotype where the amount of chitin measured in the cell wall of a microbe is increased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007626 .
obo:OMP_0007459 a rdfs:Class ;
rdfs:label "altered cell population viability" ;
rdfs:comment "A cell population viability phenotype where the proportion of cells that remain viable under the specified conditions is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0000281 , obo:OMP_0007705 .
obo:OMP_0007023 a rdfs:Class ;
rdfs:label "increased purine requirement" ;
rdfs:comment "An altered purine requirement phenotype where an organism's requirement for a purine base is increased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007074 , obo:OMP_0007081 .
obo:OMP_0000327 a rdfs:Class ;
rdfs:label "presence of cell surface area variability" ;
rdfs:subClassOf obo:OMP_0007921 .
obo:OMP_0007674 a rdfs:Class ;
rdfs:label "molecular function phenotype" ;
rdfs:comment "A microbial phenotype that affects a specific molecular function." ;
rdfs:subClassOf obo:OMP_0000000 .
obo:GO_0050896 a rdfs:Class ;
rdfs:label "response to stimulus" ;
rdfs:comment "Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus. The process begins with detection of the stimulus and ends with a change in state or activity or the cell or organism." ;
rdfs:subClassOf obo:GO_0008150 .
obo:OMP_0007960 a rdfs:Class ;
rdfs:label "decreased population growth at low temperature" ;
rdfs:subClassOf obo:OMP_0007958 .
obo:OMP_0007667 a rdfs:Class ;
rdfs:label "filamenting cell morphology" ;
rdfs:comment "An altered cell shape morphology where microbial cells continue to grow and lengthen without undergoing cell division under conditions where the designated control cell continues to both grow and divide." ;
rdfs:subClassOf obo:OMP_0007103 .
obo:OMP_0000090 a rdfs:Class ;
rdfs:label "lifespan phenotype" ;
rdfs:comment "An organismal growth phenotype dealing with the lifespan of a microorganism, cell, or cells." ;
rdfs:subClassOf obo:OMP_0000174 .
obo:OMP_0007232 a rdfs:Class ;
rdfs:label "absence of an exosporium" ;
rdfs:comment "An exosporium phenotype where the mature endospore lacks an exosporium." ;
rdfs:subClassOf obo:OMP_0007230 .
obo:OMP_0007581 a rdfs:Class ;
rdfs:label "absence of resistance to cold shock" ;
rdfs:comment "A resistance to cold phenotype where microbes in a population stop growing (and may die) when exposed to a temperature below the optimal growth temperature of the microbe." ;
rdfs:subClassOf obo:OMP_0007578 .
obo:OMP_0000296 a rdfs:Class ;
rdfs:label "presence of positive supercoiling" ;
rdfs:comment "A DNA supercoiling phenotype where the DNA twists around its axis in the same direction as the clockwise turns of the right-handed double helix." ;
rdfs:subClassOf obo:OMP_0000294 .
obo:OMP_0008059 a rdfs:Class ;
rdfs:label "plaque size phenotype" ;
rdfs:comment "A bacteriophage plaque morphology phenotype where bacteria shows an size of the viral plaque." ;
rdfs:subClassOf obo:OMP_0008057 .
obo:OMP_0000253 a rdfs:Class ;
rdfs:label "gene expression phenotype" ;
rdfs:comment "A microbial phenotype that affects expression of a gene or genes. Gene expression includes transcription, RNA processing, and, for protein-coding genes, translation and protein maturation." ;
rdfs:subClassOf obo:OMP_0000000 , obo:OMP_0007194 .
obo:PATO_0002112 a rdfs:Class ;
rdfs:label "perforate" ;
rdfs:comment "A structural quality inhering in a bearer by virtue of the bearer's having a hole or holes, especially a row or array of small holes." ;
rdfs:subClassOf obo:PATO_0002014 .
obo:OMP_0005284 a rdfs:Class ;
rdfs:label "altered colonization of host tissue" ;
rdfs:comment "A colonization of host tissue phenotype where the frequency, rate, timing, or extent of colonization of a host tissue is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0005281 , obo:OMP_0007255 .
obo:OMP_0005356 a rdfs:Class ;
rdfs:label "mating efficiency phenotype" ;
rdfs:comment "A sexual reproduction phenotype relating to the efficiency of mating, which is the proportion of cells within a population that are able to mate." ;
rdfs:subClassOf obo:OMP_0007406 .
obo:OMP_0005323 a rdfs:Class ;
rdfs:label "altered cell motility by swarming" ;
rdfs:comment "A cell motility by swarming phenotype where the frequency, rate, timing, or extent of swarming is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007001 .
obo:OMP_0007437 a rdfs:Class ;
rdfs:label "decreased sexual sporulation" ;
rdfs:comment "An altered sexual sporulation phenotype where the frequency, rate, timing, or extent of the process of forming sexual spores is decreased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007435 .
obo:PATO_0001453 a rdfs:Class ;
rdfs:label "detached from" ;
rdfs:comment "An attachment quality inhering in a bearer by virtue of the bearer's lacking connection or association with another entity." ;
rdfs:subClassOf obo:PATO_0001435 .
obo:OMP_0007362 a rdfs:Class ;
rdfs:label "Increased resistance to a nucleoside" ;
rdfs:comment "An altered resistance to a nucleoside phenotype where resistance to a nucleoside is increased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007361 .
obo:OMP_0005396 a rdfs:Class ;
rdfs:label "isometric capsid" ;
rdfs:comment "A capsid morphology phenotype where the capsid is shaped isometrically which is a shape that is characterized by equality of measure." ;
rdfs:subClassOf obo:OMP_0005394 .
obo:OMP_0005066 a rdfs:Class ;
rdfs:label "absence of gene silencing" ;
rdfs:comment "A gene silencing phenotype where a cell or cells doesn't exhibit the ability to perform gene silencing." ;
rdfs:subClassOf obo:OMP_0005046 .
obo:OMP_0005273 a rdfs:Class ;
rdfs:label "absence of endomembrane system" ;
rdfs:comment "An endomembrane system phenotype where an organism, cell, or cells lack an endomembrane system." ;
rdfs:subClassOf obo:OMP_0005269 .
obo:OMP_0007028 a rdfs:Class ;
rdfs:label "decreased quorum sensing" ;
rdfs:comment "An altered quorum sensing phenotype where the ability of organisms to monitor their population density is decreased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0006093 .
obo:OMP_0000047 a rdfs:Class ;
rdfs:label "aerotaxis phenotype" ;
rdfs:comment "A taxis phenotype where directed movement of a motile microbe is in response to environmental oxygen (O2)." ;
rdfs:subClassOf obo:OMP_0000004 .
obo:OMP_0000242 a rdfs:Class ;
rdfs:label "concentrically ringed surface colony" ;
rdfs:comment "A colony surface phenotype characterized by rippled surface that radiate outward from a central point or axis." ;
rdfs:subClassOf obo:OMP_0000210 .
obo:OMP_0005363 a rdfs:Class ;
rdfs:label "absence of osmotaxis" ;
rdfs:comment "An osmotaxis phenotype where a motile microbe doesn't display directed movement in response to an osmotic concentration gradient." ;
rdfs:subClassOf obo:OMP_0005361 .
obo:OMP_0007120 a rdfs:Class ;
rdfs:label "decreased transcription of sigma-factor dependent genes" ;
rdfs:comment "A decreased transcription phenotype where transcription of a gene or genes dependent upon a particular sigma factor is decreased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007118 .
obo:OMP_0000058 a rdfs:Class ;
rdfs:label "absence of positive aerotaxis" ;
rdfs:comment "An absence of aerotaxis phenotype where a motile microbe doesn't display directed movement towards a higher concentration of environmental oxygen (O2)." ;
rdfs:subClassOf obo:OMP_0000159 .
obo:OMP_0005299 a rdfs:Class ;
rdfs:label "increased colonization of mouse tissue" ;
rdfs:comment "An altered colonization of mouse tissue phenotype where the frequency rate, timing, or extent of colonization is increased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0005298 .
obo:OMP_0007751 a rdfs:Class ;
rdfs:label "altered subcellular component phenotype" ;
rdfs:comment "A cellular physical quality phenotype where the amount, distribution, composition, or morphology of a microbial cell part is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007637 , obo:OMP_0007750 .
obo:OMP_0006081 a rdfs:Class ;
rdfs:label "increased decarboxylase activity" ;
rdfs:comment "An altered decarboxylase test phenotype where decarboxylase activity is increased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0006079 .
obo:OMP_0006170 a rdfs:Class ;
rdfs:label "decreased binary fission" ;
rdfs:comment "An altered binary fission phenotype where the rate, frequency, timing, or extent of binary fission is decreased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0006168 .
obo:PATO_0000060 a rdfs:Class ;
rdfs:label "spatial pattern" ;
rdfs:comment "A spatial quality inhering in a bearer by virtue of the bearer's exhibiting repetition of placement of its parts." ;
rdfs:subClassOf obo:PATO_0000140 .
obo:OMP_0007427 a rdfs:Class ;
rdfs:label "decreased schizogeny" ;
rdfs:comment "An altered schizogeny phenotype where the rate, frequency, timing, or extent of schizogeny is decreased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007146 .
obo:OMP_0005088 a rdfs:Class ;
rdfs:label "decreased resistance to dessication stress" ;
rdfs:comment "An altered dessication stress phenotype where resistance of microbes in a population to dessication stress is decreased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0005120 .
obo:OMP_0007530 a rdfs:Class ;
rdfs:label "decreased lethality in an amoeba host" ;
rdfs:comment "An altered lethality in an amoeba host phenotype where the ability of an infectious microbe to cause death of an amoeba host is decreased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007527 .
obo:OMP_0000235 a rdfs:Class ;
rdfs:label "increased cell aspect ratio variability" ;
rdfs:subClassOf obo:OMP_0000227 .
obo:OMP_0007791 a rdfs:Class ;
rdfs:label "dispersed actin cortical patch localization" ;
rdfs:comment "A cellular physical quality phenotype observed in the vegetative growth phase of the life cycle in which actin cortical patches are localized throughout the cell cortex rather than concentrated at the cell ends." ;
rdfs:subClassOf obo:OMP_0007765 .
obo:OMP_0005266 a rdfs:Class ;
rdfs:label "delayed onset of endocytosis" ;
rdfs:comment "An altered endocytosis phenotype where endocytosis begins later than in a designated control. A phenotype may affect endocytosis of all cargoes, or of specific cargo such as a particular protein." ;
rdfs:subClassOf obo:OMP_0005262 .
obo:OMP_0007278 a rdfs:Class ;
rdfs:label "disproportionation of thiosulfate" ;
rdfs:comment "A chemolithotrophic phenotype where the biological disproportionation of thiosulfate occurs via an intramolecular redox change at each of the sulfur atoms and produces 1 mol of sulfate and 1 mol of sulfide." ;
rdfs:subClassOf obo:OMP_0007110 .
obo:OMP_0007151 a rdfs:Class ;
rdfs:label "altered colony pigmentation" ;
rdfs:comment "A colony pigmentation phenotype where the color of a colony or colonies is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0000107 .
obo:OMP_0006003 a rdfs:Class ;
rdfs:label "altered gene silencing" ;
rdfs:comment "A gene silencing phenotype where the frequency, rate, timing, or extent of gene silencing is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0005046 .
obo:OMP_0000095 a rdfs:Class ;
rdfs:label "spore germination phenotype" ;
rdfs:comment "A cell development phenotype regarding the physiological and developmental changes that occur in a spore following release from dormancy up to the earliest signs of growth (e.g. emergence from a spore wall)." ;
rdfs:subClassOf obo:OMP_0000070 .
obo:OMP_0007116 a rdfs:Class ;
rdfs:label "altered cell stalk" ;
rdfs:comment "An altered cell shape phenotype where the stalk of a stalk-shaped cell is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0000128 , obo:OMP_0007101 .
obo:OMP_0007380 a rdfs:Class ;
rdfs:label "benzamides resistance phenotype" ;
rdfs:comment "An antimicrobial agent resistance phenotype relating to resistance or sensitivity to a benzamide. Benzamides are compounds based on benzamide, which consists of benzene bearing a single carboxamido substituent." ;
rdfs:subClassOf obo:OMP_0000274 .
obo:OMP_0007711 a rdfs:Class ;
rdfs:label "conjugation without nitrogen starvation" ;
rdfs:comment "An altered conjugation phenotype where conjugation takes place in cells that are not subject to nitrogen starvation." ;
rdfs:subClassOf obo:OMP_0007416 .
obo:GO_0065007 a rdfs:Class ;
rdfs:label "biological regulation" ;
rdfs:comment "Any process that modulates a measurable attribute of any biological process, quality or function." ;
rdfs:subClassOf obo:GO_0008150 .
obo:OMP_0007328 a rdfs:Class ;
rdfs:label "altered bud morphology" ;
rdfs:comment "A bud morphology phenotype where the size, shape, or appearance of a bud is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007103 , obo:OMP_0007327 .
obo:OMP_0007756 a rdfs:Class ;
rdfs:label "stubby vegetative cell" ;
rdfs:comment "An altered cell morphology phenotype observed in the vegetative growth phase of the life cycle in which the cell diameter is larger and the cell length is shorter than the designated control." ;
rdfs:subClassOf obo:OMP_0007715 .
obo:OMP_0007762 a rdfs:Class ;
rdfs:label "presence of microtubule cytoskeleton" ;
rdfs:comment "A microtubule cytoskeleton phenotype where a microbial cell or cells exhibit a microtubule cytoskeleton." ;
rdfs:subClassOf obo:OMP_0007759 .
obo:OMP_0007254 a rdfs:Class ;
rdfs:label "absence of colonization of a host" ;
rdfs:comment "A colonization of a host phenotype where a microbe lacks the ability to colonize a host organism." ;
rdfs:subClassOf obo:OMP_0007252 .
obo:OMP_0007700 a rdfs:Class ;
rdfs:label "nonviable vegetative cell population" ;
rdfs:comment "A cell population phenotype in which all cells in the population are nonviable in the vegetative growth phase of the life cycle." ;
rdfs:subClassOf obo:OMP_0007699 .
obo:GO_1901362 a rdfs:Class ;
rdfs:label "organic cyclic compound biosynthetic process" ;
rdfs:comment "The chemical reactions and pathways resulting in the formation of organic cyclic compound." ;
rdfs:subClassOf obo:GO_1901360 , obo:GO_1901576 .
obo:OMP_0006092 a rdfs:Class ;
rdfs:label "decreased urease activity" ;
rdfs:comment "An altered urease activity phenotype where there urease activity is decreased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0006088 .
obo:OMP_0005102 a rdfs:Class ;
rdfs:label "increased enzymatic activity" ;
rdfs:comment "An altered enzymatic activity phenotype where a specified enzymatic activity is increased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0005130 .
obo:OMP_0000109 a rdfs:Class ;
rdfs:label "presence of mucoid colonies" ;
rdfs:comment "A mucoid colony phenotype where the colonies are mucoid." ;
rdfs:subClassOf obo:OMP_0007319 .
obo:OMP_0005251 a rdfs:Class ;
rdfs:label "absence of aerobic population growth" ;
rdfs:comment "An aerobic population growth phenotype where a microbial population cannot grow in the presence of atmospheric levels of O2 (approximately 21%)." ;
rdfs:subClassOf obo:OMP_0005250 .
obo:OMP_0007600 a rdfs:Class ;
rdfs:label "presence of chromosome segregation" ;
rdfs:comment "A chromosome segregation phenotype where replicated chromosome(s) are physically separated and apportioned as a set to daughter cells." ;
rdfs:subClassOf obo:OMP_0005047 .
obo:OMP_0007007 a rdfs:Class ;
rdfs:label "nutrient import phenotype" ;
rdfs:comment "A nutrient utilization phenotype concerning the uptake of one or more nutrients from the environment." ;
rdfs:subClassOf obo:OMP_0006022 .
obo:OMP_0007137 a rdfs:Class ;
rdfs:label "altered alkaloid resistance" ;
rdfs:comment "An alkaloid resistance phenotype where resistance to an alkaloid compound is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0000455 , obo:OMP_0007134 .
obo:OMP_0000292 a rdfs:Class ;
rdfs:label "increased fraction of non-constricted cells" ;
rdfs:subClassOf obo:OMP_0000287 .
obo:OMP_0005012 a rdfs:Class ;
rdfs:label "pressure effects on population growth phenotype" ;
rdfs:comment "A population growth range phenotype related to how growth of a microbial population is affected by pressure." ;
rdfs:subClassOf obo:OMP_0007192 .
obo:OMP_0000141 a rdfs:Class ;
rdfs:label "regular nucleoid spacing" ;
rdfs:comment "A nucleoid spacing phenotype where multiple nucleoids within a single cell exhibit regular spacing." ;
rdfs:subClassOf obo:OMP_0000140 .
obo:OMP_0000069 a rdfs:Class ;
rdfs:label "quorum sensing phenotype" ;
rdfs:comment "A microbial communication phenotype where cells sense their population density by detecting the concentration of small, diffusible signal molecules produced by the cells themselves." ;
rdfs:subClassOf obo:OMP_0000101 .
obo:OMP_0005156 a rdfs:Class ;
rdfs:label "altered protein kinase A activity" ;
rdfs:comment "A protein kinase A phenotype where protein kinase A activity is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0005130 , obo:OMP_0005154 .
obo:OMP_0007384 a rdfs:Class ;
rdfs:label "increased resistance to a benzamide" ;
rdfs:comment "An altered benzamides resistance phenotype where the resistance of an organism, cell, or cells to a benzamide is increased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007383 .
obo:OMP_0005300 a rdfs:Class ;
rdfs:label "decreased colonization of mouse tissue" ;
rdfs:comment "An altered colonization of mouse tissue phenotype where the frequency rate, timing, or extent of colonization is decreased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0005298 .
obo:OMP_0006000 a rdfs:Class ;
rdfs:label "secondary metabolite production phenotype" ;
rdfs:comment "A small molecule biosynthesis phenotype where an organism produces a secondary metabolite, which is a compound not directly involved in normal growth, development or reproduction." ;
rdfs:subClassOf obo:OMP_0000310 .
obo:OMP_0007426 a rdfs:Class ;
rdfs:label "increased schizogeny" ;
rdfs:comment "An altered schizogeny phenotype where the rate, frequency, timing, or extent of schizogeny is increased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007146 .
obo:OMP_0006052 a rdfs:Class ;
rdfs:label "decreased resistance to azole" ;
rdfs:comment "An azole compound resistance phenotype where resistance to an azole compound is decreased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0006019 .
obo:GO_0044238 a rdfs:Class ;
rdfs:label "primary metabolic process" ;
rdfs:comment "The chemical reactions and pathways involving those compounds which are formed as a part of the normal anabolic and catabolic processes. These processes take place in most, if not all, cells of the organism." ;
rdfs:subClassOf obo:GO_0008152 .
obo:OMP_0000301 a rdfs:Class ;
rdfs:label "decreased fraction of cells with two nucleoids" ;
rdfs:subClassOf obo:OMP_0000300 .
obo:OMP_0000321 a rdfs:Class ;
rdfs:label "macrolide resistance phenotype" ;
rdfs:comment "An antimicrobial compound resistance phenotype related to resistance or sensitivity to compounds with a macrolide ring--a large lactone ring with multiple keto and hydroxyl groups--that is linked to one or more sugars and that have antimicrobial properties." ;
rdfs:subClassOf obo:OMP_0000274 .
obo:OMP_0007663 a rdfs:Class ;
rdfs:label "abolished cellular reactive oxygen species" ;
rdfs:subClassOf obo:OMP_0007662 .
obo:PATO_0001821 a rdfs:Class ;
rdfs:label "imperforate" ;
rdfs:comment "A structural quality inhering in a bearer by virtue of the bearer's having no opening." ;
rdfs:subClassOf obo:PATO_0002014 .
obo:OMP_0006098 a rdfs:Class ;
rdfs:label "abolished aerotaxis" ;
rdfs:comment "A decreased aerotaxis phenotype where the ability of a microbe to perform aerotaxis is abolished." ;
rdfs:subClassOf obo:OMP_0000159 , obo:OMP_0000500 .
obo:OMP_0007039 a rdfs:Class ;
rdfs:label "purine requirement" ;
rdfs:comment "A requires growth factor(s) phenotype where the required growth factor is a purine base." ;
rdfs:subClassOf obo:OMP_0007069 .
obo:OMP_0007678 a rdfs:Class ;
rdfs:label "altered transporter activity" ;
rdfs:comment "An transporter activity phenotype where the observed rate of a specified transporter activity is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007675 .
obo:OMP_0007474 a rdfs:Class ;
rdfs:label "phenolic antimicrobial agent resistance phenotype" ;
rdfs:comment "An antimicrobial agent resistance phenotype related to resistance or sensitivity to an antimicrobial agent that belongs to the class phenols, which are organic aromatic compounds having one or more hydroxy groups attached to a benzene or other arene ring." ;
rdfs:subClassOf obo:OMP_0000274 .
obo:OMP_0000199 a rdfs:Class ;
rdfs:label "acid-fast staining phenotype" ;
rdfs:comment "A cell-staining phenotype where a cell or cells are classified based on whether they are decolorized by an acid-alcohol mixture after staining, typically with carbolfuchsin." ;
rdfs:subClassOf obo:OMP_0000214 .
obo:OMP_0006040 a rdfs:Class ;
rdfs:label "decreased resistance to quinolone" ;
rdfs:comment "A quinolone compound resistance phenotype where resistance to a quinolone compound is decreased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0005034 .
obo:OMP_0007505 a rdfs:Class ;
rdfs:label "decreased capsule size" ;
rdfs:comment "An altered capsule size phenotype where the size of the capsule is decreased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007503 .
obo:OMP_0007607 a rdfs:Class ;
rdfs:label "decreased frequency of DNA breaks" ;
rdfs:comment "An altered frequency of DNA breaks phenotype where the frequency of breaks in chromosomal DNA is decreased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007605 .
obo:GO_0034645 a rdfs:Class ;
rdfs:label "cellular macromolecule biosynthetic process" ;
rdfs:comment "The chemical reactions and pathways resulting in the formation of a macromolecule, any molecule of high relative molecular mass, the structure of which essentially comprises the multiple repetition of units derived, actually or conceptually, from molecules of low relative molecular mass, carried out by individual cells." ;
rdfs:subClassOf obo:GO_0009059 , obo:GO_0044249 , obo:GO_0044260 .
obo:OMP_0007561 a rdfs:Class ;
rdfs:label "meiotic nuclear division phenotype" ;
rdfs:comment "A cellular process phenotype related to one or both of the nuclear divisions that occur as part of the meiotic cell cycle." ;
rdfs:subClassOf obo:OMP_0007332 .
obo:PATO_0015019 a rdfs:Class ;
rdfs:label "C-shaped" ;
rdfs:comment "A concave 3-D shape quality inhering in a bearer by virtue of the bearer's being shaped in the form of the letter C." ;
rdfs:subClassOf obo:PATO_0002008 .
obo:OMP_0007077 a rdfs:Class ;
rdfs:label "altered chemotaxis" ;
rdfs:comment "A chemotaxis phenotype where the frequency, rate, timing, or extent of chemotaxis by a motile microbe is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0000048 , obo:OMP_0007127 .
obo:OMP_0007224 a rdfs:Class ;
rdfs:label "endospore location phenotype" ;
rdfs:comment "An endospore morphology phenotype that describes the characteristic location of the mature spore in the mother cell (the sporangium)." ;
rdfs:subClassOf obo:OMP_0007228 .
obo:OMP_0008004 a rdfs:Class ;
rdfs:label "endospore core phenotype" ;
rdfs:comment "An endospore internal structure phenotype that relates to the endospore core, the center of an endospore, which exists in a dehydrated state and contains the bacterial genome, ribosomes, and a large amount of dipicolinic acid." ;
rdfs:subClassOf obo:OMP_0008013 .
obo:OMP_0007611 a rdfs:Class ;
rdfs:label "absence of single-strand DNA breaks" ;
rdfs:comment "An absence of DNA breaks phenotype where single-strand DNA breaks don't occur." ;
rdfs:subClassOf obo:OMP_0007604 .
obo:OMP_0007063 a rdfs:Class ;
rdfs:label "increased myxospore formation" ;
rdfs:comment "An altered myxospore formation phenotype where the rate, frequency, timing, or extent of myxospore formation is increased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0006009 .
obo:OMP_0007938 a rdfs:Class ;
rdfs:label "abolished resistance to nutrient limitation" ;
rdfs:subClassOf obo:OMP_0007934 , obo:OMP_0007937 .
obo:OMP_0007819 a rdfs:Class ;
rdfs:label "absence of cellular pigment accumulation" ;
rdfs:comment "A cellular process phenotype where the process of accumulating pigment doesn't occur in a cell or cells of a microorganism." ;
rdfs:subClassOf obo:OMP_0007811 .
obo:OMP_0005314 a rdfs:Class ;
rdfs:label "decreased colonization of rabbit tissue" ;
rdfs:comment "An altered colonization of rabbit tissue phenotype where the frequency, rate, timing, or extent of colonization is decreased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0005312 .
obo:OMP_0007433 a rdfs:Class ;
rdfs:label "presence of sexual sporulation" ;
rdfs:comment "A sexual sporulation phenotype where an organism is able to produce sexual spores." ;
rdfs:subClassOf obo:OMP_0007405 , obo:OMP_0007439 .
obo:GO_0044767 a rdfs:Class ;
rdfs:label "single-organism developmental process" ;
rdfs:comment "A biological process whose specific outcome is the progression of an integrated living unit: an anatomical structure (which may be a subcellular structure, cell, tissue, or organ), or organism over time from an initial condition to a later condition, involving only one organism." ;
rdfs:subClassOf obo:GO_0032502 , obo:GO_0044699 .
obo:OMP_0007105 a rdfs:Class ;
rdfs:label "altered flagellum" ;
rdfs:comment "A flagellum phenotype where the composition, structure, or number of flagella is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0000027 .
obo:OMP_0005031 a rdfs:Class ;
rdfs:label "decreased stress-induced mutagenesis" ;
rdfs:comment "An altered stress-induced mutagenesis phenotype where the frequency of mutagenesis is decreased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0006034 .
obo:OMP_0000349 a rdfs:Class ;
rdfs:label "cell division during cell population growth phenotype" ;
rdfs:subClassOf obo:OMP_0007794 .
obo:OMP_0007638 a rdfs:Class ;
rdfs:label "altered cell phenotype" ;
rdfs:comment "A phenotype observed at the level of an individual cell that is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007085 , obo:OMP_0007632 .
obo:OMP_0000332 a rdfs:Class ;
rdfs:label "presence of cell surface area-to-volume ratio variability" ;
rdfs:subClassOf obo:OMP_0007921 .
obo:OMP_0007032 a rdfs:Class ;
rdfs:label "decreased utilization of inorganic nitrogen source" ;
rdfs:comment "An inorganic nitrogen source utilization phenotype where the ability to use an inorganic N-containing compound as the source of nitrogen is decreased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007305 .
obo:OMP_0000270 a rdfs:Class ;
rdfs:label "decreased cell population growth rate" ;
rdfs:subClassOf obo:OMP_0000266 .
obo:PATO_0001162 a rdfs:Class ;
rdfs:label "increased concentration" ;
rdfs:comment "A concentration which is higher relative to the normal or average." ;
rdfs:subClassOf obo:PATO_0001159 , obo:PATO_0002305 .
obo:OMP_0005200 a rdfs:Class ;
rdfs:label "absence of alpha-1,3-mannosyltransferase activity" ;
rdfs:comment "An alpha-1,3-mannosyltransferase activity phenotype where an organism lacks alpha-1,3-mannosyltransferase activity." ;
rdfs:subClassOf obo:OMP_0005198 .
obo:OMP_0008034 a rdfs:Class ;
rdfs:label "altered inner endospore membrane" ;
rdfs:comment "An inner endospore membrane phenotype where the inner membrane is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0008014 .
obo:OMP_0007422 a rdfs:Class ;
rdfs:label "abolished akinete formation" ;
rdfs:comment "A decreased akinete formation phenotype where the rate, frequency, timing, or extent of akinete formation is abolished." ;
rdfs:subClassOf obo:OMP_0000007 , obo:OMP_0007421 .
obo:PATO_0002001 a rdfs:Class ;
rdfs:label "has fewer parts of type" ;
rdfs:comment "The bearer of this quality has_part < n AND has_part > 0 of the indicated entity type, where n is the normal amount for a comparable organism. Note that the bearer of the quality is the whole, not the part. Formally: If a bearer entity e has fewer parts of type X at time t, then the number of instances x of X at t such that x part_of e is < n, where n is either the normal number for comparable entities, or n is stated explicitly." ;
rdfs:subClassOf obo:PATO_0001999 , obo:PATO_0002303 .
obo:PATO_0002240 a rdfs:Class ;
rdfs:label "teardrop-shaped" ;
rdfs:comment "A convex 3-D shape quality inhering in a bearer by virtue of the bearer's shape resembling falling drop." ;
rdfs:subClassOf obo:PATO_0002007 .
obo:OMP_0007124 a rdfs:Class ;
rdfs:label "decreased translation" ;
rdfs:comment "An altered translation phenotype where translation of one or more mRNAs is decreased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007122 .
obo:PATO_0002062 a rdfs:Class ;
rdfs:label "physical quality of a process" ;
rdfs:subClassOf obo:PATO_0001236 .
obo:OMP_0005085 a rdfs:Class ;
rdfs:label "resistance to gamma-ray radiation phenotype" ;
rdfs:comment "A radiation stress phenotype related to the resistance or sensitivity that microbes in a population show when exposed to gamma-ray radiation." ;
rdfs:subClassOf obo:OMP_0007576 .
obo:OMP_0007622 a rdfs:Class ;
rdfs:label "decreased frequency of Holliday junction structures" ;
rdfs:comment "An altered frequency of Holliday junction phenotype where the frequency of Holliday junction structures in chromosomal DNA is decreased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007620 .
obo:OMP_0007197 a rdfs:Class ;
rdfs:label "cellular component phenotype" ;
rdfs:comment "A microbial phenotype that affects a quality of a cellular component." ;
rdfs:subClassOf obo:OMP_0000000 .
obo:OMP_0007452 a rdfs:Class ;
rdfs:label "presence of survival in macrophage" ;
rdfs:comment "A presence of resistance to killing by host that describes the ability of a microbe to survive ingestion by host macrophages." ;
rdfs:subClassOf obo:OMP_0007455 .
obo:OMP_0005187 a rdfs:Class ;
rdfs:label "abolished cytoskeleton morphology" ;
rdfs:comment "A decreased cytoskeleton morphology phenotype where cytoskeleton morphology is abolished." .
obo:OMP_0007366 a rdfs:Class ;
rdfs:label "resistant to an acridine" ;
rdfs:comment "An acridine resistance phenotype where an organism, cell, or cells is resistant to an acridine." ;
rdfs:subClassOf obo:OMP_0007365 .
obo:GO_0022402 a rdfs:Class ;
rdfs:label "cell cycle process" ;
rdfs:comment "The cellular process that ensures successive accurate and complete genome replication and chromosome segregation." ;
rdfs:subClassOf obo:GO_0044763 .
obo:PATO_0002181 a rdfs:Class ;
rdfs:label "displaced" ;
rdfs:comment "A positional quality inhering in a bearer by virtue the bearer's being changed in position." ;
rdfs:subClassOf obo:PATO_0000140 .
a rdfs:Class ;
rdfs:comment "An unconstrained type or object" .
obo:OMP_0007641 a rdfs:Class ;
rdfs:label "population growth yield phenotype" ;
rdfs:comment "A population growth phenotype related to the number of individuals in a microbial population produced per amount of nutrient(s) consumed." ;
rdfs:subClassOf obo:OMP_0007167 .
obo:PATO_0000462 a rdfs:Class ;
rdfs:label "absent" ;
rdfs:comment "A quality denoting the lack of an entity." ;
rdfs:subClassOf obo:PATO_0000070 .
obo:OMP_0005193 a rdfs:Class ;
rdfs:label "increased anaerobic population growth yield" ;
rdfs:comment "An altered anaerobic growth phenotype where the anaerobic growth yield is increased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007926 .
obo:OMP_0000350 a rdfs:Class ;
rdfs:label "altered cell division during cell population growth" ;
rdfs:comment "population growth phenotype" ;
rdfs:subClassOf obo:OMP_0000349 , obo:OMP_0007809 .
obo:OMP_0005022 a rdfs:Class ;
rdfs:label "absence of an SOS response" ;
rdfs:comment "An SOS response phenotype where a cell or cells lack an SOS response." ;
rdfs:subClassOf obo:OMP_0005017 .
obo:OMP_0008015 a rdfs:Class ;
rdfs:label "absence of an inner endospore membrane" ;
rdfs:comment "An inner endospore membrane phenotype where an endospore lacks an inner membrane." ;
rdfs:subClassOf obo:OMP_0008014 .
obo:OMP_0007583 a rdfs:Class ;
rdfs:label "presence of resistance to heat shock" ;
rdfs:comment "A resistance to heat shock phenotype where a microbial population is resistant to heat shock." ;
rdfs:subClassOf obo:OMP_0007579 .
obo:OMP_0000457 a rdfs:Class ;
rdfs:label "resistant to caffeine" ;
rdfs:comment "A caffeine resistance phenotype where an organism or cell is resistant to caffeine." ;
rdfs:subClassOf obo:OMP_0000456 .
obo:OMP_0007249 a rdfs:Class ;
rdfs:label "decreased resistance to a chemical" ;
rdfs:comment "An altered chemical resistance phenotype where the resistance of a microbe to a chemical is decreased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007248 .
obo:OMP_0006017 a rdfs:Class ;
rdfs:label "altered aminoglycoside resistance" ;
rdfs:comment "An aminoglycoside resistance phenotype where resistance to an aminoglycoside compound is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0006056 , obo:OMP_0007134 .
obo:OMP_0000343 a rdfs:Class ;
rdfs:label "altered cell shape variability phenotype" ;
rdfs:comment "A cell population phenotype where variability in cell shape is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0000341 .
obo:GO_0016070 a rdfs:Class ;
rdfs:label "RNA metabolic process" ;
rdfs:comment "The cellular chemical reactions and pathways involving RNA, ribonucleic acid, one of the two main type of nucleic acid, consisting of a long, unbranched macromolecule formed from ribonucleotides joined in 3',5'-phosphodiester linkage." ;
rdfs:subClassOf obo:GO_0044260 , obo:GO_0090304 .
obo:OMP_0007281 a rdfs:Class ;
rdfs:label "absence of enzymatic activity" ;
rdfs:comment "An enzymatic activity phenotype where a specified enzymatic activity is absent in a cell, cells, or organism." ;
rdfs:subClassOf obo:OMP_0000221 .
obo:OMP_0005064 a rdfs:Class ;
rdfs:label "increased frequency of gene silencing" ;
rdfs:comment "An altered gene silencing phenotype where the incidence of gene silencing is increased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0006003 .
obo:OMP_0000177 a rdfs:Class ;
rdfs:label "liquid culture morphology phenotype" ;
rdfs:comment "A growth phenotype dealing with the morphological characteristics of a culture growing in a liquid medium." ;
rdfs:subClassOf obo:OMP_0007315 .
obo:OMP_0007239 a rdfs:Class ;
rdfs:label "not sensitive to bacteriophage" ;
rdfs:comment "A bacteriophage sensitivity phenotype where a bacterium cannot be infected by and/or support reproduction of a bacteriophage." ;
rdfs:subClassOf obo:OMP_0007237 .
obo:CHEBI_33232 a rdfs:Class ;
rdfs:label "application" ;
rdfs:comment "Intended use of the molecular entity or part thereof by humans." ;
rdfs:subClassOf obo:CHEBI_50906 .
obo:OMP_0007135 a rdfs:Class ;
rdfs:label "not resistant to alkaloid" ;
rdfs:comment "An alkaloid resistance phenotype where a cell or cells lack resistance to an alkaloid compound." ;
rdfs:subClassOf obo:OMP_0000455 .
obo:PATO_0000402 a rdfs:Class ;
rdfs:label "branched" ;
rdfs:comment "A branchiness quality inhering in a bearer by virtue of the bearer's having branches." ;
rdfs:subClassOf obo:PATO_0002009 .
obo:OMP_0005053 a rdfs:Class ;
rdfs:label "altered induced expression of the SOS response" ;
rdfs:comment "An altered SOS response phenotype where induced expression of one or more genes in the SOS response is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0005018 .
obo:OMP_0005132 a rdfs:Class ;
rdfs:label "abolished resistance to gamma ray radiation" ;
rdfs:comment "A decreased resistance to gamma-ray radiation phenotype where the resistance of microbes in a population to gamma-ray radiation is abolished." ;
rdfs:subClassOf obo:OMP_0005094 .
obo:OMP_0007393 a rdfs:Class ;
rdfs:label "absence of microbial cell viability" ;
rdfs:comment "A cell viability phenotype where a microbial cell is not viable under the specified conditions." ;
rdfs:subClassOf obo:OMP_0007259 .
obo:OMP_0007012 a rdfs:Class ;
rdfs:label "presence of inorganic carbon source utilization" ;
rdfs:comment "A carbon source utilization phenotype where a microbe can use an inorganic form of carbon, typically CO2 or carbonate, as the sole or primary carbon source." ;
rdfs:subClassOf obo:OMP_0006023 .
obo:OMP_0006069 a rdfs:Class ;
rdfs:label "not resistant to chloramphenicol" ;
rdfs:comment "A chloramphenicol compound resistance phenotype where an organism or cell is sensitive to chloramphenicol." ;
rdfs:subClassOf obo:OMP_0006066 .
obo:OMP_0008026 a rdfs:Class ;
rdfs:label "presence of a cortex" ;
rdfs:comment "An endospore cortex phenotype where an endospore has a cortex." ;
rdfs:subClassOf obo:OMP_0008024 .
obo:OMP_0005091 a rdfs:Class ;
rdfs:label "increased resistance to oxidative stress" ;
rdfs:comment "An altered oxidative stress phenotype where resistance of microbes in a population to an oxidative stress is increased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0005122 .
obo:OMP_0007846 a rdfs:Class ;
rdfs:label "organic cyclic antimicrobial agent resistance phenotype" ;
rdfs:comment "An antimicrobial agent resistance phenotype" ;
rdfs:subClassOf obo:OMP_0000274 .
obo:OMP_0007072 a rdfs:Class ;
rdfs:label "anaerobic respiration phenotype" ;
rdfs:comment "A respiration phenotype where electrons are transferred to a final electron acceptor that is not oxygen (O2)." ;
rdfs:subClassOf obo:OMP_0007112 .
obo:OMP_0007513 a rdfs:Class ;
rdfs:label "altered endospore morphology" ;
rdfs:comment "An endospore morphology phenotype where the form and structure of an endospore is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007228 , obo:OMP_0007411 .
obo:OMP_0000208 a rdfs:Class ;
rdfs:label "absence of hemolysis" ;
rdfs:comment "A hemolysis test phenotype where a cell or cells does not cause hemolysis." ;
rdfs:subClassOf obo:OMP_0000099 .
obo:OMP_0007404 a rdfs:Class ;
rdfs:label "abolished resistance to killing by host" ;
rdfs:comment "A decreased resistance to killing by host phenotype where resistance of a microbe to killing by a host is abolished." ;
rdfs:subClassOf obo:OMP_0005140 , obo:OMP_0005143 .
obo:OMP_0007900 a rdfs:Class ;
rdfs:label "not resistant to bile acids" ;
rdfs:comment "A bile acids resistance phenotype where growth and reproduction of a microbe doesn't occur in the presence of bile acids." ;
rdfs:subClassOf obo:OMP_0007898 .
obo:OMP_0000312 a rdfs:Class ;
rdfs:label "locomotion phenotype" ;
rdfs:comment "A microbial phenotype where the trait in question is the self-propelled movement of a microbe from one location to another." ;
rdfs:subClassOf obo:OMP_0000000 , obo:OMP_0007194 .
obo:OMP_0007213 a rdfs:Class ;
rdfs:label "altered inorganic phosphorus source utilization" ;
rdfs:comment "An altered phosphorus source utilization phenotype where the ability to utilize one or more inorganic sources of phosphorus is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007045 , obo:OMP_0007212 .
obo:OMP_0006123 a rdfs:Class ;
rdfs:label "abolished mitotic recombination" ;
rdfs:comment "A decreased mitotic recombination phenotype where the ability to perform mitotic recombination is abolished." ;
rdfs:subClassOf obo:OMP_0005071 .
obo:OMP_0005236 a rdfs:Class ;
rdfs:label "absence of cell wall" ;
rdfs:comment "A cell wall morphology phenotype where a cell or cells lack a cell wall." ;
rdfs:subClassOf obo:OMP_0005233 .
obo:OMP_0007146 a rdfs:Class ;
rdfs:label "altered schizogeny" ;
rdfs:comment "A schizogeny phenotype where the rate, frequency, timing, or extent of schizogeny is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0006174 , obo:OMP_0007140 .
obo:OMP_0007951 a rdfs:Class ;
rdfs:label "absence of population growth at high temperature" ;
rdfs:comment "A population growth phenotype where a microbial population isn't able to grow and reproduce at a temperature that is towards the upper end of the organism's temperature growth range." ;
rdfs:subClassOf obo:OMP_0005002 .
obo:OMP_0007052 a rdfs:Class ;
rdfs:label "utilization of organic phosphorus" ;
rdfs:comment "An organic phosphorus source utilization phenotype where an organism can use an organic P-containing compound as the source of phosphorus." .
obo:OMP_0007552 a rdfs:Class ;
rdfs:label "decreased rate of haploid fruiting" ;
rdfs:comment "A decreased haploid fruiting phenotype where the rate of the process of haploid fruiting is increased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007547 .
obo:OMP_0007723 a rdfs:Class ;
rdfs:label "decreased vegetative cell length" ;
rdfs:comment "An altered cell size phenotype where the length of a cell in the vegetative growth phase of the life cycle is decreased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007084 , obo:OMP_0007713 .
obo:GO_0005575 a rdfs:Class ;
rdfs:label "cellular_component" ;
rdfs:comment "The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together." .
obo:OMP_0007355 a rdfs:Class ;
rdfs:label "abolished amino acid requirement" ;
rdfs:comment "A decreased amino acid requirement phenotype where an organism's requirement for an amino acid in the growth medium is abolished." ;
rdfs:subClassOf obo:OMP_0007021 .
obo:OMP_0005005 a rdfs:Class ;
rdfs:label "mesophile" ;
rdfs:comment "A population growth phenotype where optimal growth of a microbial population occurs between 20 C and 45 C." ;
rdfs:subClassOf obo:OMP_0005002 .
obo:OMP_0007409 a rdfs:Class ;
rdfs:label "akinete morphology phenotype" ;
rdfs:comment "A spore morphology phenotype relating to the form and structure of an akinete, which is a thick-walled (encysted) dormant cell derived from the enlargement of a vegetative cell. Akinetes typically have granular cytoplasm, are more resistant to environmental extremes than vegetative cells, and are characteristic of several groups of Cyanobacteria." ;
rdfs:subClassOf obo:OMP_0008000 .
obo:GO_0006260 a rdfs:Class ;
rdfs:label "DNA replication" ;
rdfs:comment "The cellular metabolic process in which a cell duplicates one or more molecules of DNA. DNA replication begins when specific sequences, known as origins of replication, are recognized and bound by initiation proteins, and ends when the original DNA molecule has been completely duplicated and the copies topologically separated. The unit of replication usually corresponds to the genome of the cell, an organelle, or a virus. The template for replication can either be an existing DNA molecule or RNA." ;
rdfs:subClassOf obo:GO_0006259 , obo:GO_0034645 .
obo:OMP_0006179 a rdfs:Class ;
rdfs:label "presence of antimicrobial peptide production" ;
rdfs:comment "An antimicrobial peptide production phenotype where an organism has the ability to produce an antimicrobial peptide." ;
rdfs:subClassOf obo:OMP_0006105 .
obo:OMP_0000382 a rdfs:Class ;
rdfs:label "abolished acid tolerance response" ;
rdfs:subClassOf obo:OMP_0000377 , obo:OMP_0000380 .
obo:OMP_0000130 a rdfs:Class ;
rdfs:label "star-shaped cell shape" ;
rdfs:comment "A cell shape phenotype where a cell has projections that form points." ;
rdfs:subClassOf obo:OMP_0000073 .
obo:OMP_0000076 a rdfs:Class ;
rdfs:label "rod-shaped cells" ;
rdfs:comment "A cylindrical cell phenotype where an organism has rod-shaped cells." ;
rdfs:subClassOf obo:OMP_0007099 .
obo:OMP_0006163 a rdfs:Class ;
rdfs:label "presence of heme utilization" ;
rdfs:comment "A heme utilization phenotype where a cell or cells exhibit the ability to utilize heme as a source of iron." ;
rdfs:subClassOf obo:OMP_0000451 .
obo:OMP_0007886 a rdfs:Class ;
rdfs:label "decreased resistance to a metal" ;
rdfs:comment "A metal resistance phenotype where growth and reproduction of a microbe in the presence of a metal is decreased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007889 .
obo:OMP_0007734 a rdfs:Class ;
rdfs:label "altered septation index" ;
rdfs:comment "A septation index phenotype where the septation index is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007732 .
obo:OMP_0007347 a rdfs:Class ;
rdfs:label "altered protein secretion" ;
rdfs:comment "A protein secretion phenotype where the frequency, rate, timing or extent of the process of protein secretion is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007346 .
obo:PATO_0001555 a rdfs:Class ;
rdfs:label "has number of" ;
rdfs:comment "The number of parts of a particular type that the bearer entity has. This is a relational quality, and thus holds between two entities: the bearer of the quality, and the type of parts." ;
rdfs:subClassOf obo:PATO_0001241 .
obo:OMP_0000371 a rdfs:Class ;
rdfs:label "absence of internalization by macrophage" ;
rdfs:subClassOf obo:OMP_0000369 .
obo:OMP_0000319 a rdfs:Class ;
rdfs:label "cell area phenotype" ;
rdfs:subClassOf obo:OMP_0000074 .
obo:OMP_0005169 a rdfs:Class ;
rdfs:label "decreased superoxide dismutase activity" ;
rdfs:comment "A superoxide dismutase activity phenotype where superoxide dismutase activity is decreased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0005168 .
obo:OMP_0007292 a rdfs:Class ;
rdfs:label "altered spore germination efficiency" ;
rdfs:comment "A spore germination phenotype where the percentage of spores that germinate is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0000095 , obo:OMP_0007085 , obo:OMP_0007353 .
obo:OMP_0007228 a rdfs:Class ;
rdfs:label "endospore morphology phenotype" ;
rdfs:comment "A spore morphology phenotype that is related to the form and structure of an endospore." ;
rdfs:subClassOf obo:OMP_0008000 .
obo:OMP_0007119 a rdfs:Class ;
rdfs:label "abolished transcription of gene or operon" ;
rdfs:comment "A decreased transcription phenotype where transcription of a gene or genes is abolished relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007118 .
obo:OMP_0006129 a rdfs:Class ;
rdfs:label "absence of negative supercoiling" ;
rdfs:comment "A DNA supercoiling phenotype where negative supercoiling is absent." ;
rdfs:subClassOf obo:OMP_0000294 .
obo:PATO_0002318 a rdfs:Class ;
rdfs:label "superelliptic" ;
rdfs:comment "A shape constituting a transition between a rectangle and a circle; a closed curve, of which the circle and ellipse are special cases, whose parametric equation is x = a.cos2/rt, y = b.cos2/rt" ;
rdfs:subClassOf obo:PATO_0002006 .
obo:OMP_0007630 a rdfs:Class ;
rdfs:label "altered cell wall protein level" ;
rdfs:comment "An altered cell wall morphology phenotype where the amount of a cell wall protein measured in a cell is altered relative to a designated control. Total cell wall protein or a specific cell wall protein may be affected." ;
rdfs:subClassOf obo:OMP_0005234 , obo:OMP_0007635 .
obo:OMP_0006059 a rdfs:Class ;
rdfs:label "not resistant to aminoglycoside" ;
rdfs:comment "An aminoglycoside resistance phenotype where an organism or cell is sensitive to one or more aminoglycosides." ;
rdfs:subClassOf obo:OMP_0006056 .
obo:OMP_0005211 a rdfs:Class ;
rdfs:label "abolished adhesion to host" ;
rdfs:comment "A decreased adhesion to host phenotype where attachment of a microbe to a host is abolished." ;
rdfs:subClassOf obo:OMP_0005207 , obo:OMP_0005210 .
obo:OMP_0007325 a rdfs:Class ;
rdfs:label "absence of inorganic sulfur utilization" ;
rdfs:comment "A sulfur source utilization phenotype where an organism cannot use an inorganic S-containing chemical as the source of sulfur." ;
rdfs:subClassOf obo:OMP_0007042 .
obo:OMP_0007000 a rdfs:Class ;
rdfs:label "abolished motility" ;
rdfs:comment "A decreased motility phenotype where the ability of a microbe to be motile is abolished." ;
rdfs:subClassOf obo:OMP_0000002 , obo:OMP_0000133 .
obo:GO_0034303 a rdfs:Class ;
rdfs:label "myxospore formation" ;
rdfs:comment "The process in which differentiated, resting cells are formed, usually within a fruiting body by Myxobacteria. The myxospore is more resistant to high temperature, dessication, and UV than vegetative myxobacteria." ;
rdfs:subClassOf obo:GO_0043936 .
obo:OMP_0007693 a rdfs:Class ;
rdfs:label "absence of vegetative cell growth" ;
rdfs:comment "A vegetative cell growth phenotype in which cell growth does not occur in the vegetative growth phase of the life cycle." ;
rdfs:subClassOf obo:OMP_0007691 .
obo:OMP_0008048 a rdfs:Class ;
rdfs:label "altered plaque morphology phenotype" ;
rdfs:comment "A bacteriophage plaque morphology phenotype where the appearance and the size of the plaque is altered to a designated control." ;
rdfs:subClassOf obo:OMP_0007238 .
obo:OMP_0000285 a rdfs:Class ;
rdfs:label "decreased cell population growth yield" ;
rdfs:subClassOf obo:OMP_0000284 .
obo:OMP_0007745 a rdfs:Class ;
rdfs:label "vegetative cell phenotype" ;
rdfs:comment "A phenotype that is observed at the level of an individual cell, when the cell is in the vegetative growth phase of the cell cycle." ;
rdfs:subClassOf obo:OMP_0007632 .
obo:OMP_0006107 a rdfs:Class ;
rdfs:label "presence of outer membrane vesicles" ;
rdfs:comment "A outer membrane vesicles phenotype where a cell or cells produce outer membrane vesicles." ;
rdfs:subClassOf obo:OMP_0000202 .
obo:PATO_0001708 a rdfs:Class ;
rdfs:label "1-D extent" ;
rdfs:comment "A size quality inhering in an bearer by virtue of the bearer's extension in one dimension." ;
rdfs:subClassOf obo:PATO_0000117 .
obo:PATO_0000573 a rdfs:Class ;
rdfs:label "increased length" ;
rdfs:comment "A length quality which is relatively large." ;
rdfs:subClassOf obo:PATO_0000122 , obo:PATO_0000586 .
obo:OMP_0000112 a rdfs:Class ;
rdfs:label "presence of motility by gliding" ;
rdfs:comment "A presence of motility phenotype where a microbe exhibits smooth movement along a solid surface." ;
rdfs:subClassOf obo:OMP_0000005 .
obo:OMP_0008045 a rdfs:Class ;
rdfs:label "altered plaque morphology phenotype" ;
rdfs:comment "A bacteriophage plaque morphology phenotype where the appearance, size of viral plaque is altered relative to a designated control." .
obo:GO_0006259 a rdfs:Class ;
rdfs:label "DNA metabolic process" ;
rdfs:comment "Any cellular metabolic process involving deoxyribonucleic acid. This is one of the two main types of nucleic acid, consisting of a long, unbranched macromolecule formed from one, or more commonly, two, strands of linked deoxyribonucleotides." ;
rdfs:subClassOf obo:GO_0044260 , obo:GO_0090304 .
obo:OMP_0007001 a rdfs:Class ;
rdfs:label "altered motility" ;
rdfs:comment "A motility phenotype where the frequency, rate, timing, or extent of a microbe's motility is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0000001 , obo:OMP_0007085 .
obo:OMP_0006007 a rdfs:Class ;
rdfs:label "altered heterocyst formation" ;
rdfs:comment "A heterocyst formation phenotype where the rate, frequency, timing, or extent of heterocyst formation is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0000092 , obo:OMP_0007352 .
obo:OMP_0007155 a rdfs:Class ;
rdfs:label "decreased frequency of persister cells" ;
rdfs:comment "An altered persister cell phenotype where the fraction of cells in a microbial population that are persister cells is decreased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007153 .
obo:OMP_0007652 a rdfs:Class ;
rdfs:label "altered mitomycin resistance" ;
rdfs:comment "A mitomycin resistance phenotype where resistance to a mitomycin is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007134 , obo:OMP_0007649 .
obo:OMP_0007415 a rdfs:Class ;
rdfs:label "presence of conjugation" ;
rdfs:comment "A conjugation phenotype where mating occurs through the process of conjugation." ;
rdfs:subClassOf obo:OMP_0007413 .
obo:OMP_0008028 a rdfs:Class ;
rdfs:label "genetic transfer phenotype" ;
rdfs:comment "A genetic material phenotype relating to the ability of microbes to serve as a donor of recipient in the transfer of genetic material." ;
rdfs:subClassOf obo:OMP_0000290 .
obo:OMP_0007973 a rdfs:Class ;
rdfs:label "increased tolerance to an antimicrobial agent" ;
rdfs:comment "An altered tolerance to an antimicrobial agent phenotype where minimum duration of killing is increased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007972 .
obo:OMP_0007274 a rdfs:Class ;
rdfs:label "mixotrophic carbon source utilization" ;
rdfs:comment "A carbon source utilization phenotype where a microbe can switch between using organic and inorganic sources of carbon instead of having a single trophic mode." ;
rdfs:subClassOf obo:OMP_0006023 .
obo:PATO_0000700 a rdfs:Class ;
rdfs:label "rough" ;
rdfs:comment "A texture quality inhering in a bearer by virtue of the bearer's irregular surface." ;
rdfs:subClassOf obo:PATO_0000150 .
obo:OMP_0000338 a rdfs:Class ;
rdfs:label "cell aspect ratio phenotype" ;
rdfs:comment "cell aspect ratio (diameter/length)" ;
rdfs:subClassOf obo:OMP_0000073 .
obo:OMP_0007881 a rdfs:Class ;
rdfs:label "host defense peptides resistance phenotype" ;
rdfs:comment "An antimicrobial agent resistance phenotype relating to resistance or sensitivity to an antimicrobial peptide that is synthesized as part of the innate immune response of a eukaryotic host." ;
rdfs:subClassOf obo:OMP_0000274 .
obo:OMP_0007250 a rdfs:Class ;
rdfs:label "increased resistance to a chemical" ;
rdfs:comment "An altered chemical resistance phenotype where the resistance of a microbe to a chemical is increased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007248 .
obo:OMP_0007864 a rdfs:Class ;
rdfs:label "absence of resistance to bicyclomycin" .
obo:OMP_0005222 a rdfs:Class ;
rdfs:label "increased cell fusion" ;
rdfs:comment "An altered cell fusion phenotype where the frequency, rate, timing, or extent of cell fusion is increased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0005221 .
obo:OMP_0007373 a rdfs:Class ;
rdfs:label "resistant to alkylating agent" ;
rdfs:comment "An alkylating agent resistance phenotype where growth and reproduction of a microbe is resistant to an alkylating agent." ;
rdfs:subClassOf obo:OMP_0007372 .
obo:OMP_0005206 a rdfs:Class ;
rdfs:label "adhesion to host phenotype" ;
rdfs:comment "An adhesion phenotype that relates to the ability of a microbe to attach to a host via adhesion molecules, general stickiness, etc., either directly or indirectly. The host is defined as the larger of the organisms involved in a symbiotic relationship." ;
rdfs:subClassOf obo:OMP_0005205 , obo:OMP_0007252 .
obo:OMP_0005077 a rdfs:Class ;
rdfs:label "decreased resistance to acidic pH stress" ;
rdfs:comment "An altered acidic pH stress phenotype were resistance of microbes in a population to acidic pH is decreased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0005118 .
obo:OMP_0005106 a rdfs:Class ;
rdfs:label "increased lifespan" ;
rdfs:comment "A lifespan phenotype where lifespan is increased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0006033 .
obo:OMP_0006112 a rdfs:Class ;
rdfs:label "abolished gene silencing" ;
rdfs:comment "A decreased frequency of gene silencing phenotype where the ability to silence genes is abolished." ;
rdfs:subClassOf obo:OMP_0005065 , obo:OMP_0005066 .
obo:OMP_0005255 a rdfs:Class ;
rdfs:label "presence of microaerophilic population growth" ;
rdfs:comment "A hypoxic growth phenotype in which a cell or cells are able to grow and/or reproduce in hypoxic conditions." ;
rdfs:subClassOf obo:OMP_0005254 .
obo:OMP_0007595 a rdfs:Class ;
rdfs:label "presence of population growth" ;
rdfs:comment "A population growth phenotype where a microbial population is able to reproduce." ;
rdfs:subClassOf obo:OMP_0007167 .
obo:OMP_0005074 a rdfs:Class ;
rdfs:label "increased rate of transposable element transposition" ;
rdfs:comment "A transposable element transposition phenotype where DNA sequences change position at a higher frequency relative to a designated control." ;
rdfs:subClassOf obo:OMP_0006013 .
obo:OMP_0007962 a rdfs:Class ;
rdfs:label "presence of cell population growth during nutrient limitation" ;
rdfs:comment "A population growth phenotype where growth of a microbial population occurs under conditions of limitation for an essential nutrient (i.e. conditions where an essential nutrient is present at low concentration)." ;
rdfs:subClassOf obo:OMP_0007964 .
obo:GO_0010468 a rdfs:Class ;
rdfs:label "regulation of gene expression" ;
rdfs:comment "Any process that modulates the frequency, rate or extent of gene expression. Gene expression is the process in which a gene's coding sequence is converted into a mature gene product or products (proteins or RNA). This includes the production of an RNA transcript as well as any processing to produce a mature RNA product or an mRNA (for protein-coding genes) and the translation of that mRNA into protein. Some protein processing events may be included when they are required to form an active form of a product from an inactive precursor form." ;
rdfs:subClassOf obo:GO_0060255 .
obo:OMP_0001001 a rdfs:Class ;
rdfs:label "Increased negative supercoiling" ;
rdfs:comment "An altered DNA supercoiling phenotype where negative supercoiling is increased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0006126 .
obo:OMP_0007261 a rdfs:Class ;
rdfs:label "decreased cell viability" ;
rdfs:comment "An altered cell viability phenotype where under the specified conditions the viability of a microbe, cell, or cells is decreased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007260 .
obo:PATO_0001577 a rdfs:Class ;
rdfs:label "increased permeability" ;
rdfs:comment "A permeability which is relatively high." ;
rdfs:subClassOf obo:PATO_0000982 , obo:PATO_0002305 .
obo:OMP_0007283 a rdfs:Class ;
rdfs:label "absence of UV radiation resistance" ;
rdfs:comment "A UV-radiation resistance phenotype where microbes in a population stop growing (and may die) when exposed to UV radiation." ;
rdfs:subClassOf obo:OMP_0005084 .
obo:OMP_0000264 a rdfs:Class ;
rdfs:label "decreased nucleoid area variability" ;
rdfs:subClassOf obo:OMP_0000263 .
obo:OMP_0007875 a rdfs:Class ;
rdfs:label "altered resistance to A22" ;
rdfs:comment "This term and was deemed to be too granular. In its place, use OMP:0007134 altered resistance to an antimicrobial agent and enter database identifier for A22 in the Annotation Extension field." .
obo:OMP_0006028 a rdfs:Class ;
rdfs:label "azole antimicrobial agent resistance phenotype" ;
rdfs:comment "An antimicrobial agent resistance phenotype related to resistance or sensitivity to heteromonocyclic organic compounds consisting of a five-membered mancude-ring containing nitrogen." ;
rdfs:subClassOf obo:OMP_0000274 .
obo:OMP_0006099 a rdfs:Class ;
rdfs:label "abolished budding" ;
rdfs:comment "A decreased budding phenotype where the fraction of budding cells is decreased to zero." ;
rdfs:subClassOf obo:OMP_0006006 , obo:OMP_0007234 .
obo:OMP_0006152 a rdfs:Class ;
rdfs:label "abolished utilization of inorganic sulfur" ;
rdfs:comment "A decreased utilization of inorganic sulfur phenotype where the ability to utilize an inorganic sulfur source is abolished." ;
rdfs:subClassOf obo:OMP_0007055 , obo:OMP_0007325 .
obo:OMP_0007592 a rdfs:Class ;
rdfs:label "abolished resistance to heat shock" ;
rdfs:comment "A decreased resistance to heat shock phenotype where the resistance of a microbial population to heat shock is abolished." ;
rdfs:subClassOf obo:OMP_0007584 , obo:OMP_0007591 .
obo:OMP_0005217 a rdfs:Class ;
rdfs:label "decreased adhesion" ;
rdfs:comment "An altered adhesion phenotype where the frequency, rate, or extent of attachment of a microbe to a surface is decreased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0005215 .
obo:OMP_0000065 a rdfs:Class ;
rdfs:label "absence of virulence" ;
rdfs:comment "A virulence phenotype where an organism does not possess the ability to cause disease in another organism (host)." ;
rdfs:subClassOf obo:OMP_0000068 .
obo:OMP_0005113 a rdfs:Class ;
rdfs:label "decreased resistance to SDS-EDTA stress" ;
rdfs:comment "An altered resistance to SDS-EDTA stress phenotype where the resistance that microbes in a population show when exposed to SDS-EDTA is decreased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0005126 .
obo:PATO_0000440 a rdfs:Class ;
rdfs:label "regular spatial pattern" ;
rdfs:comment "A pattern quality inhering in a bearer by virtue of the bearer's having a repeatable or predictable placement." ;
rdfs:subClassOf obo:PATO_0000060 .
obo:OMP_0005150 a rdfs:Class ;
rdfs:label "altered ferric reductase activity" ;
rdfs:comment "A ferric reductase phenotype where ferric reductase activity is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0005130 , obo:OMP_0005148 .
obo:OMP_0007108 a rdfs:Class ;
rdfs:label "altered transcription" ;
rdfs:comment "A transcription phenotype where transcription of a gene or genes is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007080 , obo:OMP_0007106 .
obo:OMP_0007336 a rdfs:Class ;
rdfs:label "increased autophagic vesicle formation" ;
rdfs:comment "An altered autophagic vesicle formation phenotype where autophagic vesicle formation is increased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007335 .
obo:OMP_0006056 a rdfs:Class ;
rdfs:label "aminoglycoside antimicrobial agent resistance phenotype" ;
rdfs:comment "An antimicrobial agent resistance phenotype related to resistance or sensitivity of a microbe to an aminoglycoside antibiotic. Aminoglycosides contain a cyclohexane ring with amino sugars." ;
rdfs:subClassOf obo:OMP_0000274 .
obo:OMP_0005161 a rdfs:Class ;
rdfs:label "absence of phosphatase activity" ;
rdfs:comment "A phosphatase phenotype where an organism does not exhibit Phosphatase activity." ;
rdfs:subClassOf obo:OMP_0005160 .
obo:OMP_0007180 a rdfs:Class ;
rdfs:label "abolished aerobic respiration" ;
rdfs:comment "A decreased aerobic respiration phenotype where the ability to perform aerobic respiration is abolished." ;
rdfs:subClassOf obo:OMP_0007176 , obo:OMP_0007179 .
obo:OMP_0007618 a rdfs:Class ;
rdfs:label "presence of Holliday junction structures" ;
rdfs:comment "A Holliday junction structure phenotype where Holliday junction structures are present in chromosomal DNA." ;
rdfs:subClassOf obo:OMP_0007617 .
obo:OMP_0005042 a rdfs:Class ;
rdfs:label "homologous recombination phenotype" ;
rdfs:comment "A genetic material phenotype dealing with the process that occurs when two segments of DNA with identical or very similar sequences pair up and exchange or replace some portion of their DNA." ;
rdfs:subClassOf obo:OMP_0000290 .
obo:OMP_0007101 a rdfs:Class ;
rdfs:label "altered cell shape" ;
rdfs:comment "A cell shape phenotype where the shape of a cell is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0000073 , obo:OMP_0007103 .
obo:OMP_0007441 a rdfs:Class ;
rdfs:label "altered sexual reproduction" ;
rdfs:comment "A sexual reproduction phenotype where the frequency, rate, timing, or extent of sexual reproduction is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007406 .
obo:OMP_0007541 a rdfs:Class ;
rdfs:label "virion morphology phenotype" ;
rdfs:comment "A virus phenotype related to the form and structure of a virion." ;
rdfs:subClassOf obo:OMP_0007540 .
obo:OMP_0006118 a rdfs:Class ;
rdfs:label "decreased antimicrobial peptide production" ;
rdfs:comment "An antimicrobial peptide production phenotype where the amount of antimicrobial peptide produced is decreased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0006106 .
obo:OMP_0007880 a rdfs:Class ;
rdfs:label "abolished resistance to an antimicrobial agent" ;
rdfs:comment "A decreased resistance to an antimicrobial agent phenotype where resistance to the antimicrobial agent specified in the annotation extension field is abolished." ;
rdfs:subClassOf obo:OMP_0007877 , obo:OMP_0007879 .
obo:OMP_0000455 a rdfs:Class ;
rdfs:label "alkaloid chemical resistance phenotype" ;
rdfs:comment "An antimicrobial agent resistance phenotype related to resistance or sensitivity to compounds containing basic nitrogen in a heterocyclic structure." ;
rdfs:subClassOf obo:OMP_0007195 .
obo:OMP_0007090 a rdfs:Class ;
rdfs:label "more rod-like cell shape" ;
rdfs:comment "An altered cell shape phenotype where a cell's shape is more rod-like than that of a designated control." ;
rdfs:subClassOf obo:OMP_0007099 , obo:OMP_0007101 .
obo:OMP_0000215 a rdfs:Class ;
rdfs:label "decreased number of flagella" ;
rdfs:comment "An altered flagellum phenotype where the number of flagella per cell is decreased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007432 .
obo:OMP_0007050 a rdfs:Class ;
rdfs:label "decreased utilization of organic phosphorus source" ;
rdfs:comment "An organic phosphorus source utilization phenotype where the ability to use an organic P-containing compound as the source of phosphorus is decreased relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007214 .
obo:OMP_0007594 a rdfs:Class ;
rdfs:label "altered resistance to radiation stress" ;
rdfs:comment "A resistance to radiation stress phenotype where the resistance or sensitivity that microbes in a population show when exposed to radiation stress is altered relative to a designated control." ;
rdfs:subClassOf obo:OMP_0007572 , obo:OMP_0007576 .
obo:OMP_0007310 a rdfs:Class ;
rdfs:label "absence of apoptosis" ;
rdfs:comment "An apoptosis phenotype where a cell or cells cannot undergo apoptosis." ;
rdfs:subClassOf obo:OMP_0007309 .
obo:BFO_0000062 a rdf:Property ;
rdfs:label "preceded_by" ;
rdfs:range .
obo:BFO_0000063 a rdf:Property ;
rdfs:label "precedes" ;
rdfs:range .
obo:BFO_0000066 a rdf:Property ;
rdfs:label "occurs in" ;
rdfs:range .
obo:GOREL_0000002 a rdf:Property ;
rdfs:label "during" ;
rdfs:range .
obo:GOREL_0000032 a rdf:Property ;
rdfs:label "exists_during" ;
rdfs:range .
obo:GOREL_0000501 a rdf:Property ;
rdfs:label "occurs_at" ;
rdfs:range .
obo:IAO_0000115 a rdf:Property ;
rdfs:label "definition" ;
rdfs:range xsd:string .
obo:IAO_0000425 a rdf:Property ;
rdfs:label "expand assertion to" ;
rdfs:range xsd:string .
obo:IAO_0100001 a rdf:Property ;
rdfs:label "term replaced by" ;
rdfs:range xsd:string .
obo:RO_0000056 a rdf:Property ;
rdfs:label "participates_in" ;
rdfs:range .
obo:RO_0000087 a rdf:Property ;
rdfs:label "has role" ;
rdfs:range .
obo:RO_0001025 a rdf:Property ;
rdfs:label "located in" ;
rdfs:range .
obo:RO_0002092 a rdf:Property ;
rdfs:label "happens_during" ;
rdfs:range xsd:string ;
rdfs:subPropertyOf obo:RO_0002093 .
obo:RO_0002093 a rdf:Property ;
rdfs:label "ends_during" ;
rdfs:range .
obo:RO_0002161 a rdf:Property ;
rdfs:label "never_in_taxon" ;
rdfs:range xsd:string .
obo:RO_0002213 a rdf:Property ;
rdfs:label "positively regulates" ;
rdfs:range xsd:string ;
rdfs:subPropertyOf obo:RO_0002211 .
obo:RO_0002234 a rdf:Property ;
rdfs:label "has_output" ;
rdfs:comment "p has output c if either: p has direct output c or p has output input c. Implies that if p happens, c always ensues." ;
rdfs:range .
obo:RO_0002314 a rdf:Property ;
rdfs:label "inheres in part of" ;
rdfs:range .
obo:RO_0002353 a rdf:Property ;
rdfs:label "output_of" ;
rdfs:range .
obo:RO_0002604 a rdf:Property ;
rdfs:label "is opposite_of" ;
rdfs:range xsd:string .
a rdf:Property ;
rdfs:label "BRAND NAME" ;
rdfs:range xsd:string .
a rdf:Property ;
rdfs:comment "Involved_in" ;
rdfs:range xsd:string .
a rdf:Property ;
rdfs:label "FORMULA" ;
rdfs:range xsd:string .
a rdf:Property ;
rdfs:label "INN" ;
rdfs:range xsd:string .
a rdf:Property ;
rdfs:label "IUPAC NAME" ;
rdfs:range xsd:string .
a rdf:Property ;
rdfs:label "InChI" ;
rdfs:range xsd:string .
a rdf:Property ;
rdfs:label "InChIKey" ;
rdfs:range xsd:string .
a rdf:Property ;
rdfs:label "SMILES" ;
rdfs:range xsd:string .
a rdf:Property ;
rdfs:comment "SO feature annotation" ;
rdfs:range xsd:string .
a rdf:Property ;
rdfs:comment "Abnormal/normal slim" ;
rdfs:range xsd:string .
a rdf:Property ;
rdfs:comment "Absent/present slim" ;
rdfs:range xsd:string .
a rdf:Property ;
rdfs:label "adjacent_to" ;
rdfs:comment "A geometric operator, specified in Egenhofer 1989. Two features meet if they share a junction on the sequence. X adjacent_to Y iff X and Y share a boundary but do not overlap." ;
rdfs:range .
a rdf:Property ;
rdfs:comment "Attribute slim" ;
rdfs:range xsd:string .
a rdf:Property ;
rdfs:comment "cell_quality" ;
rdfs:range xsd:string .
a rdf:Property ;
rdfs:label "contains" ;
rdfs:comment "The inverse of contained_by." ;
rdfs:range .
a rdf:Property ;
rdfs:label "correlates_with" ;
rdfs:range .
a rdf:Property ;
rdfs:label "decreased_relative_to" ;
rdfs:comment "P decreased_relative_to P' if and only if: given any process p that instantiates P under condition (genotype or environment) c, there is some process p' that instantiates P' under condition c', and P' is greater than P." ;
rdfs:range .
a rdf:Property ;
rdfs:label "derives_from" ;
rdfs:range .
a rdf:Property ;
rdfs:comment "Disposition slim" ;
rdfs:range xsd:string .
a rdf:Property ;
rdfs:comment "Grouping classes that can be excluded" ;
rdfs:range xsd:string .
a rdf:Property ;
rdfs:comment "Aspergillus GO slim" ;
rdfs:range xsd:string .
a rdf:Property ;
rdfs:comment "Candida GO slim" ;
rdfs:range xsd:string .
a rdf:Property ;
rdfs:comment "Generic GO slim" ;
rdfs:range xsd:string .
a rdf:Property ;
rdfs:comment "GOA and proteome slim" ;
rdfs:range xsd:string .
a rdf:Property ;
rdfs:comment "Metagenomics GO slim" ;
rdfs:range xsd:string .
a rdf:Property ;
rdfs:comment "PIR GO slim" ;
rdfs:range xsd:string .
a rdf:Property ;
rdfs:comment "Plant GO slim" ;
rdfs:range xsd:string .
a rdf:Property ;
rdfs:comment "Fission yeast GO slim" ;
rdfs:range xsd:string .
a rdf:Property ;
rdfs:comment "Viral GO slim" ;
rdfs:range xsd:string .
a rdf:Property ;
rdfs:comment "Yeast GO slim" ;
rdfs:range xsd:string .
a rdf:Property ;
rdfs:comment "Prokaryotic GO subset" ;
rdfs:range xsd:string .
a rdf:Property ;
rdfs:label "has_dividend_entity" ;
rdfs:range .
a rdf:Property ;
rdfs:label "has_dividend_quality" ;
rdfs:range obo:PATO_0000001 ;
rdfs:subPropertyOf .
a rdf:Property ;
rdfs:label "has_divisor_entity" ;
rdfs:range .
a rdf:Property ;
rdfs:label "has_divisor_quality" ;
rdfs:range obo:PATO_0000001 ;
rdfs:subPropertyOf .
a rdf:Property ;
rdfs:label "has functional parent" ;
rdfs:range .
a rdf:Property ;
rdfs:label "has_origin" ;
rdfs:range .
a rdf:Property ;
rdfs:label "has parent hydride" ;
rdfs:range .
a rdf:Property ;
rdfs:label "has_ratio_quality" ;
rdfs:range obo:PATO_0000001 .
a rdf:Property ;
rdfs:comment "Human phenotype slim" ;
rdfs:range xsd:string .
a rdf:Property ;
rdfs:label "increased_relative_to" ;
rdfs:comment "P increased_relative_to P' if and only if: given any process p that instantiates P under condition (genotype or environment) c, there is some process p' that instantiates P' under condition c', and P' is less than P." ;
rdfs:range .
a rdf:Property ;
rdfs:label "is conjugate acid of" ;
rdfs:range .
a rdf:Property ;
rdfs:label "is conjugate base of" ;
rdfs:range .
a rdf:Property ;
rdfs:label "is enantiomer of" ;
rdfs:range .
a rdf:Property ;
rdfs:label "is_magnitude_of" ;
rdfs:range .
a rdf:Property ;
rdfs:label "is_measurement_of" ;
rdfs:range .
a rdf:Property ;
rdfs:label "is substituent group from" ;
rdfs:range .
a rdf:Property ;
rdfs:label "is tautomer of" ;
rdfs:range .
a rdf:Property ;
rdfs:label "is_unit_of" ;
rdfs:range .
a rdf:Property ;
rdfs:label "member_of" ;
rdfs:comment "A subtype of part_of. Inverse is collection_of. Winston, M, Chaffin, R, Herrmann: A taxonomy of part-whole relations. Cognitive Science 1987, 11:417-444." ;
rdfs:range xsd:string ;
rdfs:subPropertyOf obo:BFO_0000050 .
a rdf:Property ;
rdfs:comment "Catalytic activity terms in need of attention" ;
rdfs:range xsd:string .
a rdf:Property ;
rdfs:comment "Pathology slim" ;
rdfs:range xsd:string .
a rdf:Property ;
rdfs:label "non_functional_homolog_of" ;
rdfs:comment "A relationship between a pseudogenic feature and its functional ancestor." ;
rdfs:range .
a rdf:Property ;
rdfs:label "overlaps" ;
rdfs:comment "X overlaps Y iff there exists some Z such that Z contained_by X and Z contained_by Y." ;
rdfs:range .
a rdf:Property ;
rdfs:comment "Term not to be used for direct annotation" ;
rdfs:range xsd:string .
a rdf:Property ;
rdfs:comment "Term not to be used for direct manual annotation" ;
rdfs:range xsd:string .
a rdf:Property ;
rdfs:label "qualifier" ;
rdfs:range .
a rdf:Property ;
rdfs:label "realized_by" ;
rdfs:range .
a rdf:Property ;
rdfs:comment "Relational slim: types of quality that require an additional entity in order to exist" ;
rdfs:range xsd:string .
a rdf:Property ;
rdfs:comment "Scalar slim" ;
rdfs:range xsd:string .
a rdf:Property ;
rdfs:label "singly_occurring_form_of" ;
rdfs:comment "PATO divides qualities between normal (monadic, singly-occurring) qualities and relational qualities. Relational qualities stand in the 'towards' relation with respect to some additional entity. For example, The sensitivity of an eye towards red light. In some cases we want to represent a quality such as 'protruding' in both monadic and relational branches. We use this relation to link them." ;
rdfs:range .
a rdf:Property ;
rdfs:label "Systematic synonym" ;
rdfs:range xsd:string .
a rdf:Property ;
rdfs:label "transcribed_from" ;
rdfs:comment "X is transcribed_from Y if X is synthesized from template Y." ;
rdfs:range .
a rdf:Property ;
rdfs:label "transcribed_to" ;
rdfs:comment "Inverse of transcribed_from." ;
rdfs:range .
a rdf:Property ;
rdfs:comment "Value slim" ;
rdfs:range xsd:string .
a rdf:Property ;
rdfs:label "variant_of" ;
rdfs:comment "A' is a variant (mutation) of A = definition every instance of A' is either an immediate mutation of some instance of A, or there is a chain of immediate mutation processes linking A' to some instance of A." ;
rdfs:range .
a rdf:Property ;
rdfs:comment "Viral overhaul terms" ;
rdfs:range xsd:string .