@prefix rdf: . @prefix owl: . @prefix rdfs: . @prefix xml: . @prefix xsd: . a owl:Ontology; owl:versionIRI ; "Barry Smith"; "Alexander Alekseyenko", "Anna Maria Masci", "Haihe Wang"@en, "Jianmin Wu", "Jie Zheng", "Jihad Obeid", "Kaiyong Liu"@en, "Yang (Rena) Wang", "Yang Wang (Rena)"@en, "Yingtong Liu"@en, "Yongqun \"Oliver\" He (YH)"@en, "Yu Hong"; "3-15-2026"@en; "OHMI is a biomedical ontology that represents the entities and relations in the domain of host-microbiome interactions."@en; "OWL-DL"@en; "OHMI: A biomedical ontology in the domain of host-microbiome interactions."@en; "OHMI: Ontology of Host-Microbiome Interactions"@en; ; owl:versionInfo "2026-05-14" . a owl:AnnotationProperty . a owl:AnnotationProperty; "Relates an entity in the ontology to the name of the variable that is used to represent it in the code that generates the BFO OWL file from the lispy specification."@en; "Really of interest to developers only"@en; rdfs:label "BFO OWL specification label"@en; rdfs:subPropertyOf rdfs:label . a owl:AnnotationProperty; "Relates an entity in the ontology to the term that is used to represent it in the the CLIF specification of BFO2"@en; "Person:Alan Ruttenberg"; "Really of interest to developers only"@en; rdfs:label "BFO CLIF specification label"@en; rdfs:subPropertyOf rdfs:label . a owl:AnnotationProperty; "editor preferred term"@en; ; "The concise, meaningful, and human-friendly name for a class or property preferred by the ontology developers. (US-English)"@en; "PERSON:Daniel Schober"@en; "GROUP:OBI:"@en; rdfs:isDefinedBy ; rdfs:label "editor preferred term", "editor preferred term"@en . a owl:AnnotationProperty; "example"@en, "example of usage"@en; ; "A phrase describing how a term should be used and/or a citation to a work which uses it. May also include other kinds of examples that facilitate immediate understanding, such as widely know prototypes or instances of a class, or cases where a relation is said to hold."@en; "PERSON:Daniel Schober"@en; "GROUP:OBI:"@en; rdfs:isDefinedBy ; rdfs:label "example of usage"@en . a owl:AnnotationProperty; "in branch"@en; "An annotation property indicating which module the terms belong to. This is currently experimental and not implemented yet."@en; "GROUP:OBI"@en; "OBI_0000277"@en; rdfs:label "in branch"@en . a owl:AnnotationProperty; "has curation status"@en; "PERSON:Alan Ruttenberg"@en, "PERSON:Bill Bug"@en, "PERSON:Melanie Courtot"@en; "OBI_0000281"@en; rdfs:label "has curation status"@en . a owl:AnnotationProperty; "definition", "definition"@en, "textual definition"; ; "The official OBI definition, explaining the meaning of a class or property. Shall be Aristotelian, formalized and normalized. Can be augmented with colloquial definitions."@en, "The official definition, explaining the meaning of a class or property. Shall be Aristotelian, formalized and normalized. Can be augmented with colloquial definitions."@en; """2012-04-05: Barry Smith The official OBI definition, explaining the meaning of a class or property: 'Shall be Aristotelian, formalized and normalized. Can be augmented with colloquial definitions' is terrible. Can you fix to something like: A statement of necessary and sufficient conditions explaining the meaning of an expression referring to a class or property. Alan Ruttenberg Your proposed definition is a reasonable candidate, except that it is very common that necessary and sufficient conditions are not given. Mostly they are necessary, occasionally they are necessary and sufficient or just sufficient. Often they use terms that are not themselves defined and so they effectively can't be evaluated by those criteria. On the specifics of the proposed definition: We don't have definitions of 'meaning' or 'expression' or 'property'. For 'reference' in the intended sense I think we use the term 'denotation'. For 'expression', I think we you mean symbol, or identifier. For 'meaning' it differs for class and property. For class we want documentation that let's the intended reader determine whether an entity is instance of the class, or not. For property we want documentation that let's the intended reader determine, given a pair of potential relata, whether the assertion that the relation holds is true. The 'intended reader' part suggests that we also specify who, we expect, would be able to understand the definition, and also generalizes over human and computer reader to include textual and logical definition. Personally, I am more comfortable weakening definition to documentation, with instructions as to what is desirable. We also have the outstanding issue of how to aim different definitions to different audiences. A clinical audience reading chebi wants a different sort of definition documentation/definition from a chemistry trained audience, and similarly there is a need for a definition that is adequate for an ontologist to work with."""@en, """2012-04-05: Barry Smith The official OBI definition, explaining the meaning of a class or property: 'Shall be Aristotelian, formalized and normalized. Can be augmented with colloquial definitions' is terrible. Can you fix to something like: A statement of necessary and sufficient conditions explaining the meaning of an expression referring to a class or property. Alan Ruttenberg Your proposed definition is a reasonable candidate, except that it is very common that necessary and sufficient conditions are not given. Mostly they are necessary, occasionally they are necessary and sufficient or just sufficient. Often they use terms that are not themselves defined and so they effectively can't be evaluated by those criteria. On the specifics of the proposed definition: We don't have definitions of 'meaning' or 'expression' or 'property'. For 'reference' in the intended sense I think we use the term 'denotation'. For 'expression', I think we you mean symbol, or identifier. For 'meaning' it differs for class and property. For class we want documentation that let's the intended reader determine whether an entity is instance of the class, or not. For property we want documentation that let's the intended reader determine, given a pair of potential relata, whether the assertion that the relation holds is true. The 'intended reader' part suggests that we also specify who, we expect, would be able to understand the definition, and also generalizes over human and computer reader to include textual and logical definition. Personally, I am more comfortable weakening definition to documentation, with instructions as to what is desirable. We also have the outstanding issue of how to aim different definitions to different audiences. A clinical audience reading chebi wants a different sort of definition documentation/definition from a chemistry trained audience, and similarly there is a need for a definition that is adequate for an ontologist to work with. """@en; "PERSON:Daniel Schober"@en; "GROUP:OBI:"@en; rdfs:isDefinedBy ; rdfs:label "definition", "definition"@en . a owl:AnnotationProperty; "editor note"@en; ; "An administrative note intended for its editor. It may not be included in the publication version of the ontology, so it should contain nothing necessary for end users to understand the ontology."@en; "PERSON:Daniel Schober"@en; "GROUP:OBI:"@en, "GROUP:OBI:"@en; "IAO:0000116"; "uberon"; "editor_note"; true; "editor_note"; rdfs:isDefinedBy ; rdfs:label "editor note", "editor note"@en . a owl:AnnotationProperty; "term editor"@en; ; "Name of editor entering the term in the file. The term editor is a point of contact for information regarding the term. The term editor may be, but is not always, the author of the definition, which may have been worked upon by several people"@en; "20110707, MC: label update to term editor and definition modified accordingly. See http://code.google.com/p/information-artifact-ontology/issues/detail?id=115."@en, "20110707, MC: label update to term editor and definition modified accordingly. See https://github.com/information-artifact-ontology/IAO/issues/115."@en; "PERSON:Daniel Schober"@en; "GROUP:OBI:"@en; rdfs:isDefinedBy ; rdfs:label "definition editor", "definition editor"@en, "term editor", "term editor"@en . a owl:AnnotationProperty; "alternative label"@en; ; "A label for a class or property that can be used to refer to the class or property instead of the preferred rdfs:label. Alternative labels should be used to indicate community- or context-specific labels, abbreviations, shorthand forms and the like."@en; "OBO Operations committee", "PERSON:Daniel Schober"@en; "GROUP:OBI:"@en; rdfs:comment "Consider re-defing to: An alternative name for a class or property which can mean the same thing as the preferred name (semantically equivalent, narrow, broad or related)."; rdfs:label "alternative label"@en . a owl:AnnotationProperty; "definition source"@en; ; "Formal citation, e.g. identifier in external database to indicate / attribute source(s) for the definition. Free text indicate / attribute source(s) for the definition. EXAMPLE: Author Name, URI, MeSH Term C04, PUBMED ID, Wiki uri on 31.01.2007"@en; "PERSON:Daniel Schober"@en; "Discussion on obo-discuss mailing-list, see http://bit.ly/hgm99w"@en, "GROUP:OBI:"@en; rdfs:label "definition source"@en . a owl:AnnotationProperty; "has obsolescence reason"@en; "Relates an annotation property to an obsolescence reason. The values of obsolescence reasons come from a list of predefined terms, instances of the class obsolescence reason specification."@en; "PERSON:Alan Ruttenberg"@en, "PERSON:Melanie Courtot"@en; rdfs:label "has obsolescence reason"@en . a owl:AnnotationProperty; "curator note"@en; ; "An administrative note of use for a curator but of no use for a user"@en; "PERSON:Alan Ruttenberg"@en; rdfs:label "curator note"@en . a owl:AnnotationProperty; "term tracker item", "term tracker item"@en; "the URI for an OBI Terms ticket at sourceforge, such as https://sourceforge.net/p/obi/obi-terms/772/", "the URI for an OBI Terms ticket at sourceforge, such as https://sourceforge.net/p/obi/obi-terms/772/"@en, "the URL for an ontology term tracker issue, such as https://github.com/monarch-initiative/mondo/issues/7588"@en; ; "A URL for a request or discussion of an ontology term."@en, "An IRI or similar locator for a request or discussion of an ontology term.", "An IRI or similar locator for a request or discussion of an ontology term."@en; "Person: Jie Zheng, Chris Stoeckert, Alan Ruttenberg", "Person: Jie Zheng, Chris Stoeckert, Alan Ruttenberg"@en; "Person: Jie Zheng, Chris Stoeckert, Alan Ruttenberg", "Person: Jie Zheng, Chris Stoeckert, Alan Ruttenberg"@en; rdfs:comment "The 'tracker item' can associate a tracker with a specific ontology term.", "The 'tracker item' can associate a tracker with a specific ontology term."@en; rdfs:label "term tracker item"@en; rdfs:range xsd:anyURI . a owl:AnnotationProperty; "ontology term requester"@en; ; "The name of the person, project, or organization that motivated inclusion of an ontology term by requesting its addition."@en; "Person: Jie Zheng, Chris Stoeckert, Alan Ruttenberg"@en; "Person: Jie Zheng, Chris Stoeckert, Alan Ruttenberg"@en; rdfs:comment "The 'term requester' can credit the person, organization or project who request the ontology term."; rdfs:label "ontology term requester"@en . a owl:AnnotationProperty; "is denotator type"@en; "Relates an class defined in an ontology, to the type of it's denotator"@en; "In OWL 2 add AnnotationPropertyRange('is denotator type' 'denotator type')"@en; "Alan Ruttenberg"@en; rdfs:label "is denotator type"@en . a owl:AnnotationProperty; "imported from"@en; ; "For external terms/classes, the ontology from which the term was imported"@en; "PERSON:Alan Ruttenberg"@en, "PERSON:Melanie Courtot"@en; "GROUP:OBI:"@en; rdfs:isDefinedBy ; rdfs:label "imported from"@en . a owl:AnnotationProperty; "expand expression to"@en; """ObjectProperty: RO_0002104 Label: has plasma membrane part Annotations: IAO_0000424 \"http://purl.obolibrary.org/obo/BFO_0000051 some (http://purl.org/obo/owl/GO#GO_0005886 and http://purl.obolibrary.org/obo/BFO_0000051 some ?Y)\" """@en; "A macro expansion tag applied to an object property (or possibly a data property) which can be used by a macro-expansion engine to generate more complex expressions from simpler ones"@en; "Chris Mungall"@en; rdfs:label "expand expression to"@en . a owl:AnnotationProperty; "expand assertion to"@en; """ObjectProperty: RO??? Label: spatially disjoint from Annotations: expand_assertion_to \"DisjointClasses: (http://purl.obolibrary.org/obo/BFO_0000051 some ?X) (http://purl.obolibrary.org/obo/BFO_0000051 some ?Y)\" """@en; "A macro expansion tag applied to an annotation property which can be expanded into a more detailed axiom."@en; "Chris Mungall"@en; rdfs:label "expand assertion to"@en . a owl:AnnotationProperty; "first order logic expression"@en; "PERSON:Alan Ruttenberg"@en; rdfs:label "first order logic expression"@en . a owl:AnnotationProperty; "antisymmetric property"@en; "part_of antisymmetric property xsd:true"@en; "Use boolean value xsd:true to indicate that the property is an antisymmetric property"@en; "Alan Ruttenberg"@en; rdfs:label "antisymmetric property"@en; rdfs:subPropertyOf . a owl:AnnotationProperty; "OBO foundry unique label"@en; ; "An alternative name for a class or property which is unique across the OBO Foundry."@en; "The intended usage of that property is as follow: OBO foundry unique labels are automatically generated based on regular expressions provided by each ontology, so that SO could specify unique label = 'sequence ' + [label], etc. , MA could specify 'mouse + [label]' etc. Upon importing terms, ontology developers can choose to use the 'OBO foundry unique label' for an imported term or not. The same applies to tools .", "The intended usage of that property is as follow: OBO foundry unique labels are automatically generated based on regular expressions provided by each ontology, so that SO could specify unique label = 'sequence ' + [label], etc. , MA could specify 'mouse + [label]' etc. Upon importing terms, ontology developers can choose to use the 'OBO foundry unique label' for an imported term or not. The same applies to tools ."@en; "PERSON:Alan Ruttenberg"@en, "PERSON:Bjoern Peters"@en, "PERSON:Chris Mungall"@en, "PERSON:Melanie Courtot"@en; "GROUP:OBO Foundry "@en; rdfs:label "OBO foundry unique label"@en . a owl:AnnotationProperty; "has ID digit count"@en; """Ontology: Annotations: 'has ID prefix': \"http://purl.obolibrary.org/obo/RO_\" 'has ID digit count' : 7, rdfs:label \"RO id policy\" 'has ID policy for': \"RO\""""@en; "Relates an ontology used to record id policy to the number of digits in the URI. The URI is: the 'has ID prefix\" annotation property value concatenated with an integer in the id range (left padded with \"0\"s to make this many digits)"@en; "Person:Alan Ruttenberg"@en; rdfs:label "has ID digit count"@en . a owl:AnnotationProperty; "has ID range allocated"@en; """Datatype: idrange:1 Annotations: 'has ID range allocated to': \"Chris Mungall\" EquivalentTo: xsd:integer[> 2151 , <= 2300] """@en; "Relates a datatype that encodes a range of integers to the name of the person or organization who can use those ids constructed in that range to define new terms"@en; "Person:Alan Ruttenberg"@en; rdfs:label "has ID range allocated to"@en . a owl:AnnotationProperty; "has ID policy for"@en; """Ontology: Annotations: 'has ID prefix': \"http://purl.obolibrary.org/obo/RO_\" 'has ID digit count' : 7, rdfs:label \"RO id policy\" 'has ID policy for': \"RO\""""@en; "Relating an ontology used to record id policy to the ontology namespace whose policy it manages"@en; "Person:Alan Ruttenberg"@en; rdfs:label "has ID policy for"@en . a owl:AnnotationProperty; "has ID prefix"@en; """Ontology: Annotations: 'has ID prefix': \"http://purl.obolibrary.org/obo/RO_\" 'has ID digit count' : 7, rdfs:label \"RO id policy\" 'has ID policy for': \"RO\""""@en; "Relates an ontology used to record id policy to a prefix concatenated with an integer in the id range (left padded with \"0\"s to make this many digits) to construct an ID for a term being created."@en; "Person:Alan Ruttenberg"@en; rdfs:label "has ID prefix"@en . a owl:AnnotationProperty; "elucidation"@en; "person:Alan Ruttenberg"@en; "Person:Barry Smith"@en; "Primitive terms in a highest-level ontology such as BFO are terms which are so basic to our understanding of reality that there is no way of defining them in a non-circular fashion. For these, therefore, we can provide only elucidations, supplemented by examples and by axioms"@en; rdfs:isDefinedBy ; rdfs:label "elucidation"@en . a owl:AnnotationProperty; "has associated axiom(nl)"@en; "Person:Alan Ruttenberg"@en; "Person:Alan Ruttenberg"@en; "An axiom associated with a term expressed using natural language"@en; rdfs:isDefinedBy ; rdfs:label "has associated axiom(nl)"@en . a owl:AnnotationProperty; "has associated axiom(fol)"@en; "Person:Alan Ruttenberg"@en; "Person:Alan Ruttenberg"@en; "An axiom expressed in first order logic using CLIF syntax"@en; rdfs:isDefinedBy ; rdfs:label "has associated axiom(fol)"@en . a owl:AnnotationProperty; "is allocated id range"@en; "Relates an ontology IRI to an (inclusive) range of IRIs in an OBO name space. The range is give as, e.g. \"IAO_0020000-IAO_0020999\""@en; "PERSON:Alan Ruttenberg"@en; rdfs:comment "Add as annotation triples in the granting ontology"@en; rdfs:label "is allocated id range"@en . a owl:AnnotationProperty; "has ontology root term"@en; "Ontology annotation property. Relates an ontology to a term that is a designated root term of the ontology. Display tools like OLS can use terms annotated with this property as the starting point for rendering the ontology class hierarchy. There can be more than one root."@en; "Nicolas Matentzoglu"@en; rdfs:label "has ontology root term"@en . a owl:AnnotationProperty; "may be identical to"@en; "A annotation relationship between two terms in an ontology that may refer to the same (natural) type but where more evidence is required before terms are merged."@en; "David Osumi-Sutherland"@en; "#40"@en; "VFB"@en; rdfs:comment "Edges asserting this should be annotated with to record evidence supporting the assertion and its provenance."@en; rdfs:label "may be identical to"@en . a owl:AnnotationProperty; "scheduled for obsoletion on or after"@en; "Used when the class or object is scheduled for obsoletion/deprecation on or after a particular date."@en; "Chris Mungall, Jie Zheng"@en; "https://github.com/geneontology/go-ontology/issues/15532"@en, "https://github.com/information-artifact-ontology/ontology-metadata/issues/32"@en; "GO ontology"@en; rdfs:label "scheduled for obsoletion on or after"@en; rdfs:range xsd:dateTime . a owl:AnnotationProperty; "has axiom id"@en; "Person:Alan Ruttenberg"@en; "Person:Alan Ruttenberg"@en; "A URI that is intended to be unique label for an axiom used for tracking change to the ontology. For an axiom expressed in different languages, each expression is given the same URI"@en; rdfs:label "has axiom label"@en . a owl:AnnotationProperty; "term replaced by"@en; ; "Use on obsolete terms, relating the term to another term that can be used as a substitute"@en; "Person:Alan Ruttenberg"@en; "Person:Alan Ruttenberg"@en; rdfs:comment "Add as annotation triples in the granting ontology"@en; rdfs:label "term replaced by"@en . a owl:AnnotationProperty; "an annotation property that lists keyword(s) useful for literature tagging and retrieval of sentences containing the type (or kind) of entity (e.g., interaction) as shown by the ontology term label and definition. "; "Yongqun He"; rdfs:label "has literature mining keywords"@en . a owl:AnnotationProperty; "ISA alternative term"@en; ; "An alternative term used by the ISA tools project (http://isa-tools.org)."; """Requested by Alejandra Gonzalez-Beltran https://sourceforge.net/tracker/?func=detail&aid=3603413&group_id=177891&atid=886178"""; "Person: Alejandra Gonzalez-Beltran", "Person: Philippe Rocca-Serra"; "ISA tools project (http://isa-tools.org)"; rdfs:label "ISA alternative term"@en; rdfs:subPropertyOf . a owl:AnnotationProperty; "NIAID GSCID-BRC alternative term"@en; ; "An alternative term used by the National Institute of Allergy and Infectious Diseases (NIAID) Genomic Sequencing Centers for Infectious Diseases (GSCID) and Bioinformatics Resource Centers (BRC)."; "PERSON: Chris Stoeckert, Jie Zheng"; "NIAID GSCID-BRC metadata working group"; rdfs:label "NIAID GSCID-BRC alternative term"@en; rdfs:subPropertyOf . a owl:AnnotationProperty; "IEDB alternative term"; ; "An alternative term used by the IEDB."; "PERSON:Randi Vita, Jason Greenbaum, Bjoern Peters"; "IEDB"; rdfs:label "IEDB alternative term"; rdfs:subPropertyOf . a owl:AnnotationProperty; "An annotation property that represents a publication that includes the evidence of the presence of a class type."; "Jie Zheng, Jihad, Anna Maria, Haihe, Oliver"; rdfs:label "evidence publication"@en . a owl:AnnotationProperty; "This is an annotation used on an object property to indicate a logical characterstic beyond what is possible in OWL."; "OBO Operations call"; ; rdfs:label "logical characteristic of object property" . a owl:AnnotationProperty; """'part disjoint with' 'defined by construct' \"\"\" PREFIX owl: PREFIX : PREFIX : "Links an annotation property to a SPARQL CONSTRUCT query which is meant to provide semantics for a shortcut relation."; ; , ; rdfs:label "defined by construct" . a owl:AnnotationProperty; "The property is intended to be used exclusively on synonym assertions, to express that the synonym in question is the preference of a specific community. For example, one community may prefer to say call a disease \"A\" and another one \"B\" (but they are the same thing)."; "A provenance property that denotes a synonym to be the preferred one for a specific community."; ; ; "2025-06-02"^^xsd:date; rdfs:label "preferred label for community" . a owl:AnnotationProperty; "CHEBI:26523 (reactive oxygen species) has an exact synonym (ROS), which is of type OMO:0003000 (abbreviation)"; "A synonym type for describing abbreviations or initialisms"; ; ; "2023-03-03"^^xsd:date; rdfs:label "abbreviation"; rdfs:subPropertyOf . a owl:AnnotationProperty; "A synonym type for describing ambiguous synonyms"; ; ; "2023-03-03"^^xsd:date; rdfs:label "ambiguous synonym"; rdfs:subPropertyOf . a owl:AnnotationProperty; "A synonym type for describing dubious synonyms"; ; ; "2023-03-03"^^xsd:date; rdfs:label "dubious synonym"; rdfs:subPropertyOf . a owl:AnnotationProperty; "EFO:0006346 (severe cutaneous adverse reaction) has an exact synonym (scar), which is of the type OMO:0003003 (layperson synonym)"; "A synonym type for describing layperson or colloquial synonyms"; ; ; "2023-03-03"^^xsd:date; rdfs:label "layperson synonym"; rdfs:subPropertyOf . a owl:AnnotationProperty; "CHEBI:23367 (molecular entity) has an exact synonym (molecular entities), which is of the type OMO:0003004 (plural form)"; "A synonym type for describing pluralization synonyms"; ; ; "2023-03-03"^^xsd:date; rdfs:label "plural form"; rdfs:subPropertyOf . a owl:AnnotationProperty; "CHEBI:16189 (sulfate) has an exact synonym (sulphate), which is of the type OMO:0003005 (UK spelling synonym)"; "A synonym type for describing UK spelling variants"; ; ; "2023-03-03"^^xsd:date; rdfs:label "UK spelling synonym"; rdfs:subPropertyOf . a owl:AnnotationProperty; "A synonym type for common misspellings"; ; ; "2023-03-03"^^xsd:date; rdfs:label "misspelling"; rdfs:subPropertyOf . a owl:AnnotationProperty; "A synonym type for misnomers, i.e., a synonym that is not technically correct but is commonly used anyway"; ; ; "2023-03-03"^^xsd:date; rdfs:label "misnomer"; rdfs:subPropertyOf . a owl:AnnotationProperty; "MAPT, the gene that encodes the Tau protein, has a previous name DDPAC. Note: in this case, the name type is more specifically the gene symbol."; "A synonym type for names that have been used as primary labels in the past."; ; ; "2023-07-25"^^xsd:date; rdfs:label "previous name"; rdfs:subPropertyOf . a owl:AnnotationProperty; "The legal name for Harvard University (https://ror.org/03vek6s52) is President and Fellows of Harvard College"; "A synonym type for the legal entity name"; ; ; "2023-07-27"^^xsd:date; rdfs:label "legal name"; rdfs:subPropertyOf . a owl:AnnotationProperty; "CHEBI:46195 has been assigned the english International Nonproproprietary Name (INN) \"paracetamol\". In some cases such as this one, the INN might be the same as the ontology's primary label"; "The International Nonproprietary Name (INN) is a standardize name for a pharmaceutical drug or active ingredient issued by the World Health Organization (WHO) meant to address the issues with country- or language-specific brand names. These are issued in several languages, including English, Latin, French, Russian, Spanish, Arabic, and Chinese."; ; ; "2023-09-30"^^xsd:date; "INN"; rdfs:label "International Nonproprietary Name"; rdfs:subPropertyOf . a owl:AnnotationProperty; "nasopharynx (UBERON:0001728) has the latin name \"pars nasalis pharyngis"; "A synonym type for describing Latin term synonyms."; ; ; "2023-10-12"^^xsd:date; rdfs:label "latin term"; rdfs:subPropertyOf . a owl:AnnotationProperty; "NASA is an word acronym for the US National Aeronautics and Space Administration because the acronym is pronounced. FBI is an initialism (also known as alphabetism) for the US Federal Bureau of Investigation since the letters are pronounced one at a time. JPEG is an acronym for Joint Photographic Experts Group but does not count as a word acronym nor an initialism since it is mixed how it is pronounced."; "A synonym type for describing abbreviations that are a part of the full name's words, such as initialisms or alphabetisms."; ; ; "2023-11-01"^^xsd:date; rdfs:label "acronym"; rdfs:subPropertyOf . a owl:AnnotationProperty; "The Developing Mouse Brain Atlas Ontology (DBMA) ontology uses part-of in its hierarchy, so this would correspond to the following turtle: ` a owl:Ontology; OMO:0003014 rdfs:subClassOf, BFO:0000050`."; "Relates an ontology to predicates/properties that should be used by user interfaces to render the hierarchical structure of the ontology. Typically, this is rdfs:subClassOf, but in ontologies that are partonomies, this might also include BFO:0000050 (part of). Tools like OLS can use predicates annotated with this property for rendering the ontology class hierarchy. There can be more than one hierarchical property. In the absence of any, it should be assumed that it is rdfs:subClassOf."; ; ; "2025-09-17"^^xsd:date; rdfs:label "has ontology hierarchical property" . a owl:AnnotationProperty; "A serial number such as \"12324X\"; a stop sign; a written proper name such as \"OBI"; "An information content entity that is a mark(s) or character(s) used as a conventional representation of another entity."; ; ; "2024-03-25"^^xsd:date; rdfs:label "has symbol" . a owl:AnnotationProperty; "An assertion that holds between an OWL Object Property and a temporal interpretation that elucidates how OWL Class Axioms that use this property are to be interpreted in a temporal context."; rdfs:label "temporal interpretation"; rdfs:seeAlso ; rdfs:subPropertyOf . a owl:AnnotationProperty; "An assertion that holds between an ontology class and an organism taxon class, which is intepreted to yield some relationship between instances of the ontology class and the taxon."; rdfs:label "taxonomic class assertion"@en; rdfs:seeAlso ; rdfs:subPropertyOf . a owl:AnnotationProperty; "S present_in_taxon T if some instance of T has some S. This does not means that all instances of T have an S - it may only be certain life stages or sexes that have S"; ; ; """PREFIX rdfs: PREFIX owl: PREFIX in_taxon: PREFIX present_in_taxon: CONSTRUCT { in_taxon: a owl:ObjectProperty . ?witness rdfs:label ?label . ?witness rdfs:subClassOf ?x . ?witness rdfs:subClassOf [ a owl:Restriction ; owl:onProperty in_taxon: ; owl:someValuesFrom ?taxon ] . } WHERE { ?x present_in_taxon: ?taxon . BIND(IRI(CONCAT( \"http://purl.obolibrary.org/obo/RO_0002175#\", MD5(STR(?x)), \"-\", MD5(STR(?taxon)) )) as ?witness) BIND(CONCAT(STR(?x), \" in taxon \", STR(?taxon)) AS ?label) }"""; rdfs:comment "The SPARQL expansion for this relation introduces new named classes into the ontology. For this reason it is likely that the expansion should only be performed during a QC pipeline; the expanded output should usually not be included in a published version of the ontology."; rdfs:label "present in taxon"@en; rdfs:seeAlso ; rdfs:subPropertyOf . a owl:AnnotationProperty; "An assertion that involves at least one OWL object that is intended to be expanded into one or more logical axioms. The logical expansion can yield axioms expressed using any formal logical system, including, but not limited to OWL2-DL."; rdfs:label "logical macro assertion"@en; rdfs:seeAlso "http://purl.obolibrary.org/obo/ro/docs/shortcut-relations/"^^xsd:anyURI . a owl:AnnotationProperty; "A logical macro assertion whose domain is an IRI for a class"; "The domain for this class can be considered to be owl:Class, but we cannot assert this in OWL2-DL"; rdfs:label "logical macro assertion on a class"@en; rdfs:subPropertyOf . a owl:AnnotationProperty; "A logical macro assertion whose domain is an IRI for a property"; rdfs:label "logical macro assertion on a property"@en; rdfs:subPropertyOf . a owl:AnnotationProperty; "Used to annotate object properties to describe a logical meta-property or characteristic of the object property."; rdfs:label "logical macro assertion on an object property"@en; rdfs:subPropertyOf . a owl:AnnotationProperty; rdfs:label "logical macro assertion on an annotation property"@en; rdfs:subPropertyOf . a owl:AnnotationProperty; "relation p is the direct form of relation q iff p is a subPropertyOf q, p does not have the Transitive characteristic, q does have the Transitive characteristic, and for all x, y: x q y -> exists z1, z2, ..., zn such that x p z1 ... z2n y"; """The general property hierarchy is: \"directly P\" SubPropertyOf \"P\" Transitive(P) Where we have an annotation assertion \"directly P\" \"is direct form of\" \"P\""""; "If we have the annotation P is-direct-form-of Q, and we have inverses P' and Q', then it follows that P' is-direct-form-of Q'"; ; rdfs:label "is direct form of"; rdfs:seeAlso ; rdfs:subPropertyOf . a owl:AnnotationProperty; "relation p is the indirect form of relation q iff p is a subPropertyOf q, and there exists some p' such that p' is the direct form of q, p' o p' -> p, and forall x,y : x q y -> either (1) x p y or (2) x p' y"; ; rdfs:label "is indirect form of"; rdfs:seeAlso ; rdfs:subPropertyOf . a owl:AnnotationProperty; "Used to annotate object properties representing a causal relationship where the value indicates a direction. Should be \"+\", \"-\" or \"0\""; ; "2018-03-13T23:59:29Z"^^xsd:dateTime; rdfs:label "is directional form of"; rdfs:subPropertyOf . a owl:AnnotationProperty; ; "2018-03-14T00:03:16Z"^^xsd:dateTime; rdfs:label "is positive form of"; rdfs:subPropertyOf . a owl:AnnotationProperty; ; "2018-03-14T00:03:24Z"^^xsd:dateTime; rdfs:label "is negative form of"; rdfs:subPropertyOf . a owl:AnnotationProperty; "part-of is homeomorphic for independent continuants."; "R is homemorphic for C iff (1) there exists some x,y such that x R y, and x and y instantiate C and (2) for all x, if x is an instance of C, and there exists some y some such that x R y, then it follows that y is an instance of C."; ; "2018-10-21T19:46:34Z"^^xsd:dateTime; rdfs:comment "R homeomorphic-for C expands to: C SubClassOf R only C. Additionally, for any class D that is disjoint with C, we can also expand to C DisjointWith R some D, D DisjointWith R some C."; rdfs:label "is homeomorphic for"; rdfs:seeAlso ; rdfs:subPropertyOf . a owl:AnnotationProperty; "An alternate textual definition for a class taken unmodified from an external source. This definition may have been used to derive a generalized definition for the new class."; "UBPROP:0000001"; "uberon"; "external_definition"; true; "external_definition"; rdfs:comment "This annotation property may be replaced with an annotation property from an external ontology such as IAO"; rdfs:label "external_definition" . a owl:AnnotationProperty; "Notes on the homology status of this class."; "UBPROP:0000003"; "uberon"; "homology_notes"; true; "homology_notes"; rdfs:comment "This annotation property may be replaced with an annotation property from an external ontology such as IAO"; rdfs:label "homology_notes" . a owl:AnnotationProperty; "Used to connect a class to an adjectival form of its label. For example, a class with label 'intestine' may have a relational adjective 'intestinal'."; "UBPROP:0000007"; "uberon"; "has_relational_adjective"; true; "has_relational_adjective"; rdfs:label "has_relational_adjective" . a owl:AnnotationProperty; "Notes on the how instances of this class vary across species."; "UBPROP:0000008"; "uberon"; "taxon_notes"; true; "taxon_notes"; rdfs:label "taxon_notes" . a owl:AnnotationProperty; "Notes on the ontogenic development of instances of this class."; "This annotation property may be replaced with an annotation property from an external ontology such as IAO"; "UBPROP:0000011"; "uberon"; "development_notes"; true; "development_notes"; rdfs:label "development_notes" . a owl:AnnotationProperty; "Notes on how similar or equivalent classes are represented in other ontologies."; "This annotation property may be replaced with an annotation property from an external ontology such as IAO"; "UBPROP:0000012"; "uberon"; "external_ontology_notes"; true; "external_ontology_notes"; rdfs:label "external_ontology_notes" . a owl:AnnotationProperty; """Examples of a Contributor include a person, an organisation, or a service. Typically, the name of a Contributor should be used to indicate the entity."""@en-US; rdfs:comment """An entity responsible for making contributions to the content of the resource."""@en-US; rdfs:isDefinedBy ; rdfs:label "Contributor"@en-US . a owl:AnnotationProperty . a owl:AnnotationProperty; """Examples of a Creator include a person, an organisation, or a service. Typically, the name of a Creator should be used to indicate the entity."""@en-US; rdfs:comment """An entity primarily responsible for making the content of the resource."""@en-US; rdfs:isDefinedBy ; rdfs:label "Creator"@en-US . a owl:AnnotationProperty; """Typically, Date will be associated with the creation or availability of the resource. Recommended best practice for encoding the date value is defined in a profile of ISO 8601 [W3CDTF] and follows the YYYY-MM-DD format."""@en-US; rdfs:comment """A date associated with an event in the life cycle of the resource."""@en-US; rdfs:isDefinedBy ; rdfs:label "Date"@en-US . a owl:AnnotationProperty; """Description may include but is not limited to: an abstract, table of contents, reference to a graphical representation of content or a free-text account of the content."""@en-US; rdfs:comment "An account of the content of the resource."@en-US; rdfs:isDefinedBy ; rdfs:label "Description", "Description"@en-US . a owl:AnnotationProperty; """Typically, Format may include the media-type or dimensions of the resource. Format may be used to determine the software, hardware or other equipment needed to display or operate the resource. Examples of dimensions include size and duration. Recommended best practice is to select a value from a controlled vocabulary (for example, the list of Internet Media Types [MIME] defining computer media formats)."""@en-US; rdfs:comment "The physical or digital manifestation of the resource."@en-US; rdfs:isDefinedBy ; rdfs:label "Format", "Format"@en-US . a owl:AnnotationProperty . a owl:AnnotationProperty . a owl:AnnotationProperty . a owl:AnnotationProperty . a owl:AnnotationProperty . a owl:AnnotationProperty; """The present resource may be derived from the Source resource in whole or in part. Recommended best practice is to reference the resource by means of a string or number conforming to a formal identification system."""@en-US; rdfs:comment """A reference to a resource from which the present resource is derived."""@en-US; rdfs:isDefinedBy ; rdfs:label "Source", "Source"@en-US . a owl:AnnotationProperty; """Typically, a Subject will be expressed as keywords, key phrases or classification codes that describe a topic of the resource. Recommended best practice is to select a value from a controlled vocabulary or formal classification scheme."""@en-US; rdfs:comment "The topic of the content of the resource."@en-US; rdfs:isDefinedBy ; rdfs:label "Subject and Keywords", "Subject and Keywords"@en-US . a owl:AnnotationProperty . a owl:AnnotationProperty . a owl:AnnotationProperty . a owl:AnnotationProperty . a owl:AnnotationProperty . a owl:AnnotationProperty . a owl:AnnotationProperty . a owl:AnnotationProperty; "Mark Miller"; "2018-05-11T13:47:29Z"^^xsd:dateTime . a owl:AnnotationProperty . a owl:AnnotationProperty . a owl:AnnotationProperty . a owl:AnnotationProperty; rdfs:label "created_by" . a owl:AnnotationProperty; rdfs:label "creation_date" . a owl:AnnotationProperty; rdfs:label "has_alternative_id" . a owl:AnnotationProperty; "An alternative label for a class or property which has a more general meaning than the preferred name/primary label."; ; "https://github.com/information-artifact-ontology/ontology-metadata/issues/18"; rdfs:label "has broad synonym"@en; rdfs:seeAlso "https://github.com/information-artifact-ontology/ontology-metadata/issues/18"; rdfs:subPropertyOf . a owl:AnnotationProperty; "disease characteristic (MONDO:0021125) has cross-reference (http://www.geneontology.org/formats/oboInOwl#hasDbXref) \"NCIT:C41009\"^^xsd:string"; "An annotation property that links an ontology entity or a statement to a prefixed identifier or URI."; ; ; "2024-03-18"^^xsd:date; rdfs:label "database_cross_reference", "has cross-reference" . a owl:AnnotationProperty; "An alternative label for a class or property which has the exact same meaning than the preferred name/primary label."; ; "https://github.com/information-artifact-ontology/ontology-metadata/issues/20"; rdfs:label "has exact synonym"@en; rdfs:seeAlso "https://github.com/information-artifact-ontology/ontology-metadata/issues/20"; rdfs:subPropertyOf . a owl:AnnotationProperty; "An alternative label for a class or property which has a more specific meaning than the preferred name/primary label."; ; "https://github.com/information-artifact-ontology/ontology-metadata/issues/19"; rdfs:label "has narrow synonym"@en; rdfs:seeAlso "https://github.com/information-artifact-ontology/ontology-metadata/issues/19"; rdfs:subPropertyOf . a owl:AnnotationProperty; rdfs:comment "disease_ontology"; rdfs:label "has_obo_namespace" . a owl:AnnotationProperty; "An alternative label for a class or property that has been used synonymously with the primary term name, but the usage is not strictly correct."; ; "https://github.com/information-artifact-ontology/ontology-metadata/issues/21"; rdfs:label "has related synonym"@en; rdfs:seeAlso "https://github.com/information-artifact-ontology/ontology-metadata/issues/21"; rdfs:subPropertyOf . a owl:AnnotationProperty; rdfs:label "id" . a owl:AnnotationProperty; rdfs:label "in_subset" . a owl:AnnotationProperty . a owl:AnnotationProperty . a owl:AnnotationProperty; rdfs:label "shorthand" . rdfs:comment a owl:AnnotationProperty . rdfs:isDefinedBy a owl:AnnotationProperty; "is defined by" . rdfs:label a owl:AnnotationProperty; "label"; rdfs:label "label", "label"@en . rdfs:seeAlso a owl:AnnotationProperty; rdfs:seeAlso, "http://www.w3.org/2000/01/rdf-schema#seeAlso"; "uberon"; "seeAlso"; true; true; "seeAlso"; rdfs:label "see also", "seeAlso" . owl:minQualifiedCardinality a owl:AnnotationProperty . a owl:AnnotationProperty . a owl:AnnotationProperty . a owl:AnnotationProperty; ; "uberon"; "depicted_by"; true; "depicted_by"; rdfs:label "depicted by" . a owl:AnnotationProperty . a owl:AnnotationProperty . xsd:date a rdfs:Datatype . a owl:ObjectProperty, owl:TransitiveProperty; owl:equivalentProperty _:42b0a0; rdfs:subPropertyOf ; owl:inverseOf ; "is part of"@en; "my brain is part of my body (continuant parthood, two material entities)"@en, "my stomach cavity is part of my stomach (continuant parthood, immaterial entity is part of material entity)"@en, "this day is part of this year (occurrent parthood)"@en; "a core relation that holds between a part and its whole"@en; "Everything is part of itself. Any part of any part of a thing is itself part of that thing. Two distinct things cannot be part of each other."@en, "Occurrents are not subject to change and so parthood between occurrents holds for all the times that the part exists. Many continuants are subject to change, so parthood between continuants will only hold at certain times, but this is difficult to specify in OWL. See http://purl.obolibrary.org/obo/ro/docs/temporal-semantics/"@en, "Occurrents are not subject to change and so parthood between occurrents holds for all the times that the part exists. Many continuants are subject to change, so parthood between continuants will only hold at certain times, but this is difficult to specify in OWL. See https://code.google.com/p/obo-relations/wiki/ROAndTime"@en, """Parthood requires the part and the whole to have compatible classes: only an occurrent can be part of an occurrent; only a process can be part of a process; only a continuant can be part of a continuant; only an independent continuant can be part of an independent continuant; only an immaterial entity can be part of an immaterial entity; only a specifically dependent continuant can be part of a specifically dependent continuant; only a generically dependent continuant can be part of a generically dependent continuant. (This list is not exhaustive.) A continuant cannot be part of an occurrent: use 'participates in'. An occurrent cannot be part of a continuant: use 'has participant'. A material entity cannot be part of an immaterial entity: use 'has location'. A specifically dependent continuant cannot be part of an independent continuant: use 'inheres in'. An independent continuant cannot be part of a specifically dependent continuant: use 'bearer of'."""@en; "part_of"@en; , ; ; , , , , , , ; , , , ; rdfs:label "part of"@en; rdfs:seeAlso , , "http://www.obofoundry.org/ro/#OBO_REL:part_of", "https://wiki.geneontology.org/Part_of"^^xsd:anyURI . _:42b0a0 owl:inverseOf . a owl:ObjectProperty, owl:TransitiveProperty; rdfs:subPropertyOf ; "has part"@en; "my body has part my brain (continuant parthood, two material entities)"@en, "my stomach has part my stomach cavity (continuant parthood, material entity has part immaterial entity)"@en, "this year has part this day (occurrent parthood)"@en; "a core relation that holds between a whole and its part"@en; "Everything has itself as a part. Any part of any part of a thing is itself part of that thing. Two distinct things cannot have each other as a part."@en, "Occurrents are not subject to change and so parthood between occurrents holds for all the times that the part exists. Many continuants are subject to change, so parthood between continuants will only hold at certain times, but this is difficult to specify in OWL. See http://purl.obolibrary.org/obo/ro/docs/temporal-semantics/"@en, "Occurrents are not subject to change and so parthood between occurrents holds for all the times that the part exists. Many continuants are subject to change, so parthood between continuants will only hold at certain times, but this is difficult to specify in OWL. See https://code.google.com/p/obo-relations/wiki/ROAndTime"@en, """Parthood requires the part and the whole to have compatible classes: only an occurrent have an occurrent as part; only a process can have a process as part; only a continuant can have a continuant as part; only an independent continuant can have an independent continuant as part; only a specifically dependent continuant can have a specifically dependent continuant as part; only a generically dependent continuant can have a generically dependent continuant as part. (This list is not exhaustive.) A continuant cannot have an occurrent as part: use 'participates in'. An occurrent cannot have a continuant as part: use 'has participant'. An immaterial entity cannot have a material entity as part: use 'location of'. An independent continuant cannot have a specifically dependent continuant as part: use 'bearer of'. A specifically dependent continuant cannot have an independent continuant as part: use 'inheres in'."""@en; "has_part"@en; , ; ; , , ; rdfs:label "has part"@en . a owl:ObjectProperty; owl:equivalentProperty _:42b0b0; owl:inverseOf ; rdfs:domain ; rdfs:range ; "realized in"@en; "this disease is realized in this disease course"@en, "this fragility is realized in this shattering"@en, "this investigator role is realized in this investigation"@en; "is realized by"@en, "realized_in"@en; ; "[copied from inverse property 'realizes'] to say that b realizes c at t is to assert that there is some material entity d & b is a process which has participant d at t & c is a disposition or role of which d is bearer_of at t& the type instantiated by b is correlated with the type instantiated by c. (axiom label in BFO2 Reference: [059-003])"@en; rdfs:comment "Paraphrase of elucidation: a relation between a realizable entity and a process, where there is some material entity that is bearer of the realizable entity and participates in the process, and the realizable entity comes to be realized in the course of the process"; rdfs:isDefinedBy ; rdfs:label "realized in"@en . _:42b0b0 owl:inverseOf . a owl:ObjectProperty; rdfs:domain ; rdfs:range ; "realizes"@en; "this disease course realizes this disease"@en, "this investigation realizes this investigator role"@en, "this shattering realizes this fragility"@en; "Paraphrase of elucidation: a relation between a process and a realizable entity, where there is some material entity that is bearer of the realizable entity and participates in the process, and the realizable entity comes to be realized in the course of the process"@en; , ; "to say that b realizes c at t is to assert that there is some material entity d & b is a process which has participant d at t & c is a disposition or role of which d is bearer_of at t& the type instantiated by b is correlated with the type instantiated by c. (axiom label in BFO2 Reference: [059-003])"@en; rdfs:comment "Paraphrase of elucidation: a relation between a process and a realizable entity, where there is some material entity that is bearer of the realizable entity and participates in the process, and the realizable entity comes to be realized in the course of the process"; rdfs:isDefinedBy ; rdfs:label "realizes"@en . a owl:ObjectProperty; ; rdfs:comment """accidentally included in BFO 1.2 proposal - should have been BFO_0000062"""@en; rdfs:label "obsolete preceded by"@en; owl:deprecated true . a owl:ObjectProperty, owl:TransitiveProperty; rdfs:subPropertyOf ; owl:inverseOf ; rdfs:domain ; rdfs:range ; owl:propertyChainAxiom _:42b0c0, _:42b0e0, _:42b100; "preceded by"@en; "x is preceded by y if and only if the time point at which y ends is before or equivalent to the time point at which x starts. Formally: x preceded by y iff ω(y) <= α(x), where α is a function that maps a process to a start point, and ω is a function that maps a process to an end point."@en; "An example is: translation preceded_by transcription; aging preceded_by development (not however death preceded_by aging). Where derives_from links classes of continuants, preceded_by links classes of processes. Clearly, however, these two relations are not independent of each other. Thus if cells of type C1 derive_from cells of type C, then any cell division involving an instance of C1 in a given lineage is preceded_by cellular processes involving an instance of C. The assertion P preceded_by P1 tells us something about Ps in general: that is, it tells us something about what happened earlier, given what we know about what happened later. Thus it does not provide information pointing in the opposite direction, concerning instances of P1 in general; that is, that each is such as to be succeeded by some instance of P. Note that an assertion to the effect that P preceded_by P1 is rather weak; it tells us little about the relations between the underlying instances in virtue of which the preceded_by relation obtains. Typically we will be interested in stronger relations, for example in the relation immediately_preceded_by, or in relations which combine preceded_by with a condition to the effect that the corresponding instances of P and P1 share participants, or that their participants are connected by relations of derivation, or (as a first step along the road to a treatment of causality) that the one process in some way affects (for example, initiates or regulates) the other."@en; "is preceded by"@en, "preceded_by"@en; ; "http://www.obofoundry.org/ro/#OBO_REL:preceded_by"; ; rdfs:label "preceded by"@en . _:42b0c0 rdf:first ; rdf:rest _:42b0d0 . _:42b0d0 rdf:first ; rdf:rest rdf:nil . _:42b0e0 rdf:first ; rdf:rest _:42b0f0 . _:42b0f0 rdf:first ; rdf:rest rdf:nil . _:42b100 rdf:first ; rdf:rest _:42b110 . _:42b110 rdf:first ; rdf:rest rdf:nil . a owl:ObjectProperty, owl:TransitiveProperty; rdfs:subPropertyOf ; rdfs:domain ; rdfs:range ; owl:propertyChainAxiom _:42b120, _:42b140; "precedes"@en; "x precedes y if and only if the time point at which x ends is before or equivalent to the time point at which y starts. Formally: x precedes y iff ω(x) <= α(y), where α is a function that maps a process to a start point, and ω is a function that maps a process to an end point."@en; ; ; rdfs:label "precedes"@en . _:42b120 rdf:first ; rdf:rest _:42b130 . _:42b130 rdf:first ; rdf:rest rdf:nil . _:42b140 rdf:first ; rdf:rest _:42b150 . _:42b150 rdf:first ; rdf:rest rdf:nil . a owl:ObjectProperty; owl:inverseOf ; rdfs:domain ; rdfs:range ; owl:propertyChainAxiom _:42b160, _:42b180; "occurs in"@en; "b occurs_in c =def b is a process and c is a material entity or immaterial entity& there exists a spatiotemporal region r and b occupies_spatiotemporal_region r.& forall(t) if b exists_at t then c exists_at t & there exist spatial regions s and s’ where & b spatially_projects_onto s at t& c is occupies_spatial_region s’ at t& s is a proper_continuant_part_of s’ at t"@en; "occurs_in"@en, "unfolds in"@en, "unfolds_in"@en; ; , , ; rdfs:comment "Paraphrase of definition: a relation between a process and an independent continuant, in which the process takes place entirely within the independent continuant"; rdfs:isDefinedBy ; rdfs:label "occurs in"@en; rdfs:seeAlso "https://wiki.geneontology.org/Occurs_in"^^xsd:anyURI . _:42b160 rdf:first ; rdf:rest _:42b170 . _:42b170 rdf:first ; rdf:rest rdf:nil . _:42b180 rdf:first ; rdf:rest _:42b190 . _:42b190 rdf:first ; rdf:rest rdf:nil . a owl:ObjectProperty; "site of"@en; "[copied from inverse property 'occurs in'] b occurs_in c =def b is a process and c is a material entity or immaterial entity& there exists a spatiotemporal region r and b occupies_spatiotemporal_region r.& forall(t) if b exists_at t then c exists_at t & there exist spatial regions s and s’ where & b spatially_projects_onto s at t& c is occupies_spatial_region s’ at t& s is a proper_continuant_part_of s’ at t"@en; ; rdfs:comment "Paraphrase of definition: a relation between an independent continuant and a process, in which the process takes place entirely within the independent continuant"; rdfs:isDefinedBy ; rdfs:label "contains process"@en . a owl:ObjectProperty, owl:FunctionalProperty; rdfs:subPropertyOf ; rdfs:range ; ; rdfs:label "has measurement unit label"@en . a owl:ObjectProperty; rdfs:domain ; "This document is about information artifacts and their representations"@en; ; "is_about is a (currently) primitive relation that relates an information artifact to an entity."@en; """7/6/2009 Alan Ruttenberg. Following discussion with Jonathan Rees, and introduction of \"mentions\" relation. Weaken the is_about relationship to be primitive. We will try to build it back up by elaborating the various subproperties that are more precisely defined. Some currently missing phenomena that should be considered \"about\" are predications - \"The only person who knows the answer is sitting beside me\" , Allegory, Satire, and other literary forms that can be topical without explicitly mentioning the topic."""@en; "person:Alan Ruttenberg"@en; "Smith, Ceusters, Ruttenberg, 2000 years of philosophy"@en; ; rdfs:label "is about"@en . a owl:ObjectProperty; rdfs:subPropertyOf ; rdfs:domain ; rdfs:range ; ; "relates a process to a time-measurement-datum that represents the duration of the process"@en; "Person:Alan Ruttenberg"@en; ; rdfs:label "is duration of"@en . a owl:ObjectProperty; owl:equivalentProperty _:42b1a0; rdfs:subPropertyOf ; owl:inverseOf ; rdfs:domain ; "has_specified_input", "has_specified_input"@en; "see is_input_of example_of_usage"@en; ; "A relation between a planned process and a continuant participating in that process that is not created during the process. The presence of the continuant during the process is explicitly specified in the plan specification which the process realizes the concretization of."@en; "8/17/09: specified inputs of one process are not necessarily specified inputs of a larger process that it is part of. This is in contrast to how 'has participant' works."; "PERSON: Alan Ruttenberg"@en, "PERSON: Bjoern Peters", "PERSON: Larry Hunter", "PERSON: Melanie Coutot"; ; rdfs:label "has_specified_input"@en . _:42b1a0 owl:inverseOf . a owl:ObjectProperty; rdfs:subPropertyOf ; rdfs:range ; "is_specified_input_of"; "some Autologous EBV(Epstein-Barr virus)-transformed B-LCL (B lymphocyte cell line) is_input_for instance of Chromum Release Assay described at https://wiki.cbil.upenn.edu/obiwiki/index.php/Chromium_Release_assay"@en; ; "A relation between a planned process and a continuant participating in that process that is not created during the process. The presence of the continuant during the process is explicitly specified in the plan specification which the process realizes the concretization of."@en; "Alan Ruttenberg"@en, "PERSON:Bjoern Peters"; ; rdfs:label "is_specified_input_of"@en . a owl:ObjectProperty; owl:equivalentProperty _:42b1b0; rdfs:subPropertyOf ; owl:inverseOf ; rdfs:domain ; "has_specified_output", "has_specified_output"@en; ; "A relation between a planned process and a continuant participating in that process. The presence of the continuant at the end of the process is explicitly specified in the objective specification which the process realizes the concretization of."@en; "PERSON: Alan Ruttenberg"@en, "PERSON: Bjoern Peters", "PERSON: Larry Hunter", "PERSON: Melanie Courtot"; ; rdfs:label "has_specified_output"@en . _:42b1b0 owl:inverseOf . a owl:ObjectProperty; rdfs:subPropertyOf ; rdfs:range ; "is_specified_output_of", "is_specified_output_of"@en; ; "A relation between a planned process and a continuant participating in that process. The presence of the continuant at the end of the process is explicitly specified in the objective specification which the process realizes the concretization of."@en; "Alan Ruttenberg"@en, "PERSON:Bjoern Peters"; ; rdfs:label "is_specified_output_of"@en . a owl:ObjectProperty; owl:inverseOf ; rdfs:domain ; rdfs:range ; "achieves_planned_objective"; "A cell sorting process achieves the objective specification 'material separation objective'"; ; "This relation obtains between a planned process and a objective specification when the criteria specified in the objective specification are met at the end of the planned process."; "BP, AR, PPPB branch"; "PPPB branch derived"; "modified according to email thread from 1/23/09 in accordince with DT and PPPB branch"; ; rdfs:label "achieves_planned_objective" . a owl:ObjectProperty; rdfs:subPropertyOf ; "has grain"; ; "the relation of the cells in the finger of the skin to the finger, in which an indeterminate number of grains are parts of the whole by virtue of being grains in a collective that is part of the whole, and in which removing one granular part does not nec- essarily damage or diminish the whole. Ontological Whether there is a fixed, or nearly fixed number of parts - e.g. fingers of the hand, chambers of the heart, or wheels of a car - such that there can be a notion of a single one being missing, or whether, by contrast, the number of parts is indeterminate - e.g., cells in the skin of the hand, red cells in blood, or rubber molecules in the tread of the tire of the wheel of the car."; "Discussion in Karslruhe with, among others, Alan Rector, Stefan Schulz, Marijke Keet, Melanie Courtot, and Alan Ruttenberg. Definition take from the definition of granular parthood in the cited paper. Needs work to put into standard form"@en; "PERSON: Alan Ruttenberg"@en; "PAPER: Granularity, scale and collectivity: When size does and does not matter, Alan Rector, Jeremy Rogers, Thomas Bittner, Journal of Biomedical Informatics 39 (2006) 333-349"; ; rdfs:label "has grain" . a owl:ObjectProperty; rdfs:domain ; rdfs:range ; "objective_achieved_by"; ; "This relation obtains between a a objective specification and a planned process when the criteria specified in the objective specification are met at the end of the planned process."; "OBI"; "OBI"; ; rdfs:label "objective_achieved_by" . a owl:ObjectProperty; rdfs:subPropertyOf ; rdfs:domain ; rdfs:range ; "has value specification"; ; "A relation between an information content entity and a value specification that specifies its value."; "PERSON: James A. Overton"; "OBI"; ; rdfs:label "has value specification" . a owl:ObjectProperty; rdfs:subPropertyOf ; owl:inverseOf ; rdfs:range ; "An object property that represents the susceptible increase (compared to healthy control) of the population of a microbe in a host with a specific disease. This is a shortcut relation where the domain is microbe, and the range is a disease."; "Oliver He"; rdfs:label "microbe susceptibly expanded in host with disease"@en . a owl:ObjectProperty; rdfs:subPropertyOf ; "An object property that represents the susceptible increase (compared to healthy control) of the population of a microbe in a human with a specific disease. This is a shortcut relation where the domain is microbe, and the range is a disease."; "Oliver He"; rdfs:label "microbe susceptibly expanded in human with disease"@en . a owl:ObjectProperty; rdfs:subPropertyOf ; "An object property that represents the susceptible increase (compared to healthy control) of the population of a microbe in the gut of a human with a specific disease. This is a shortcut relation where the domain is microbe, and the range is a disease."; "Oliver He"; rdfs:label "microbe susceptibly expanded in gut of human with disease"@en . a owl:ObjectProperty; ; "http://purl.obolibrary.org/obo/RO_0016002"; rdfs:label "obsolete has disease"; owl:deprecated true . a owl:ObjectProperty; rdfs:subPropertyOf ; owl:inverseOf ; rdfs:range ; "An object property that represents the susceptible decrease (compared to healthy control) of the population of a microbe in a host with a specific disease. The susceptibility is usually derived from peer-reviewed studies. This is a shortcut relation where the domain is microbe, and the range is a disease."; "Oliver He"; rdfs:label "microbe susceptibly depleted in host with disease"@en . a owl:ObjectProperty; "this is a shortcut object property that represents the phenotype that exists in a microbial population inside a host."; "Yongqun He, Haihe Wang, Jie Zheng"; rdfs:label "microbial population phenotype in host"@en . a owl:ObjectProperty; rdfs:subPropertyOf ; "An object property that represents the susceptible decrease (compared to healthy control) of the population of a microbe in a human with a specific disease. This is a shortcut relation where the domain is microbe, and the range is a disease."; "Oliver He"; rdfs:label "microbe susceptibly depleted in human with disease"@en . a owl:ObjectProperty; ; ; rdfs:label "obsolete has phenotype"; owl:deprecated true . a owl:ObjectProperty; rdfs:subPropertyOf ; "An object property that represents the susceptible decrease (compared to healthy control) of the population of a microbe in the gut of a human with a specific disease. This is a shortcut relation where the domain is microbe, and the range is a disease."; "Oliver He"; rdfs:label "microbe susceptibly depleted in gut of human with disease"@en . a owl:ObjectProperty; rdfs:subPropertyOf ; "An object property that represents the susceptible decrease (compared to healthy control) of the population of a microbe in a rat with a specific disease. This is a shortcut relation where the domain is microbe, and the range is a disease."; "Oliver He"; rdfs:label "microbe susceptibly depleted in rat with disease"@en . a owl:ObjectProperty; rdfs:subPropertyOf ; "An object property that represents the susceptible increase (compared to healthy control) of the population of a microbe in a rat with a specific disease. This is a shortcut relation where the domain is microbe, and the range is a disease.", "Oliver He"; rdfs:label "microbe susceptibly expanded in rat with disease"@en . a owl:ObjectProperty; rdfs:subPropertyOf ; "An object property that represents the susceptible decrease (compared to healthy control) of the population of a microbe in the gut of a rat with a specific disease. This is a shortcut relation where the domain is microbe, and the range is a disease."; "Oliver He"; rdfs:label "microbe susceptibly depleted in gut of rat with disease"@en . a owl:ObjectProperty; rdfs:subPropertyOf ; "An object property that represents the susceptible increase (compared to healthy control) of the population of a microbe in the gut of a rat with a specific disease. This is a shortcut relation where the domain is microbe, and the range is a disease."; "Oliver He"; rdfs:label "microbe susceptibly expanded in gut of rat with disease"@en . a owl:ObjectProperty; rdfs:domain ; "An object property that represents a disease in a host where the host has susceptibly increased population of a microbe. This is a shortcut relation where the domain is disease, and the range is a microbe."; "Oliver He"; rdfs:label "disease in host with susceptibly expanded microbe"@en . a owl:ObjectProperty; rdfs:range ; "An object property that represents the susceptible change (compared to healthy control) of the population of a microbe in a host with a specific disease. This is a shortcut relation where the domain is microbe, and the range is a disease."; "Oliver He"; rdfs:label "microbe susceptibly changed in host with disease"@en . a owl:ObjectProperty; rdfs:domain ; "An object property that represents a disease in a host where the host has susceptibly decreased population of a microbe. This is a shortcut relation where the domain is disease, and the range is a microbe."; "Oliver He"; rdfs:label "disease in host with susceptibly depleted microbe"@en . a owl:ObjectProperty; rdfs:subPropertyOf ; "An object property that represents the susceptible decrease (compared to healthy control) of the population of a microbe in the respiratory airway of a human with a specific disease. This is a shortcut relation where the domain is microbe, and the range is a disease."; "Oliver He"; rdfs:label "microbe susceptibly depleted in respiratory airway of human with disease"@en . a owl:ObjectProperty; rdfs:subPropertyOf ; "An object property that represents the susceptible increase (compared to healthy control) of the population of a microbe in the respiratory airway of a human with a specific disease. This is a shortcut relation where the domain is microbe, and the range is a disease."; "Oliver He"; rdfs:label "microbe susceptibly expanded in respiratory airway of human with disease"@en . a owl:ObjectProperty; rdfs:subPropertyOf ; "An object property that represents the susceptible increase (compared to healthy control) of the population of a microbe in the oral cavity of a human with a specific disease. This is a shortcut relation where the domain is microbe, and the range is a disease."; "Oliver He"; rdfs:label "microbe susceptibly expanded in oral cavity of human with disease"@en . a owl:ObjectProperty; rdfs:subPropertyOf ; "An object property that represents the susceptible decrease (compared to healthy control) of the population of a microbe in the oral cavity of a human with a specific disease. This is a shortcut relation where the domain is microbe, and the range is a disease."; "Oliver He"; rdfs:label "microbe susceptibly depleted in oral cavity of human with disease"@en . a owl:ObjectProperty; rdfs:subPropertyOf ; rdfs:label "microbe susceptibly expanded in mouse with disease"@en . a owl:ObjectProperty; rdfs:subPropertyOf ; rdfs:label "microbe susceptibly expanded in gut of mouse with disease"@en . a owl:ObjectProperty; rdfs:subPropertyOf ; rdfs:label "microbe susceptibly depleted in mouse with disease"@en . a owl:ObjectProperty; rdfs:subPropertyOf ; rdfs:label "microbe susceptibly depleted in gut of mouse with disease"@en . a owl:ObjectProperty; rdfs:subPropertyOf ; rdfs:domain ; "an object property that represents the relation between a host-microbiome interaction and a microbe where the population of the microbe is depleted in a diseased host compared to a healthy host control."; "Oliver He"; rdfs:label "has microbe depleted in diseased host"@en . a owl:ObjectProperty; rdfs:subPropertyOf ; "an object property that represents the relation between a host-microbiome interaction and a microbe where the population of the microbe is expanded in a diseased host compared to a healthy host control."; "Oliver He"; rdfs:label "has microbe expanded in diseased host"@en . a owl:ObjectProperty; rdfs:subPropertyOf owl:topObjectProperty; rdfs:label "microbe susceptibly depleted (compared to fibromyalgia patients) in gut of human with disease"@en . a owl:ObjectProperty; rdfs:subPropertyOf ; rdfs:domain ; "A subproperty of the 'has participant' object property that has the domain of host-microbiome interaction and range of a microbe where the population of the microbe has size altered in a disease host organism"; "YH"; rdfs:label "has microbe population size altered in diseased host"@en . a owl:ObjectProperty; "an object subproperty of 'has participant' in which the participant is a host organism."; "Oliver He"; ; ; rdfs:label "obsolete has host"; owl:deprecated true . a owl:ObjectProperty; rdfs:subPropertyOf ; "A bacterium is expanded in gastric cancer patient compared to gastritis patient"; "an object property that represents the relation between a host-microbiome interaction and a microbe where the population of the microbe is expanded in a diseased host compared to a host with gastritis."; "Oliver He, Yingtong Liu"; rdfs:label "has microbe expanded compared to gastritis"@en . a owl:ObjectProperty; rdfs:subPropertyOf ; "an object property that represents the relation between a host-microbiome interaction and a microbe where the population of the microbe is expanded in a diseased host compared to a host with superficial gastritis."; "Oliver He, Yingtong Liu"; rdfs:label "has microbe expanded compared to superficial gastritis"@en . a owl:ObjectProperty, owl:FunctionalProperty; owl:equivalentProperty _:42b1c0; rdfs:subPropertyOf ; owl:inverseOf ; "inheres in"@en; "this fragility is a characteristic of this vase"@en, "this red color is a characteristic of this apple"@en; "a relation between a specifically dependent continuant (the characteristic) and any other entity (the bearer), in which the characteristic depends on the bearer for its existence."@en; "inheres_in"@en; , ; ; rdfs:comment "Note that this relation was previously called \"inheres in\", but was changed to be called \"characteristic of\" because BFO2 uses \"inheres in\" in a more restricted fashion. This relation differs from BFO2:inheres_in in two respects: (1) it does not impose a range constraint, and thus it allows qualities of processes, as well as of information entities, whereas BFO2 restricts inheres_in to only apply to independent continuants (2) it is declared functional, i.e. something can only be a characteristic of one thing."; rdfs:label "characteristic of"@en . _:42b1c0 owl:inverseOf . a owl:ObjectProperty, owl:InverseFunctionalProperty; rdfs:range ; "bearer of"@en; "this apple is bearer of this red color"@en, "this vase is bearer of this fragility"@en; "Inverse of characteristic_of"@en; "A bearer can have many dependents, and its dependents can exist for different periods of time, but none of its dependents can exist when the bearer does not exist."@en; "bearer_of"@en, "is bearer of"@en; , ; ; rdfs:label "has characteristic"@en . a owl:ObjectProperty; owl:equivalentProperty _:42b1d0; owl:inverseOf ; rdfs:domain ; rdfs:range ; "participates in"@en; "this blood clot participates in this blood coagulation"@en, "this input material (or this output material) participates in this process"@en, "this investigator participates in this investigation"@en; "a relation between a continuant and a process, in which the continuant is somehow involved in the process"@en; "participates_in"@en; , ; rdfs:label "participates in"@en . _:42b1d0 owl:inverseOf . a owl:ObjectProperty; rdfs:domain ; rdfs:range ; owl:propertyChainAxiom _:42b1e0, _:42b210; "has participant"@en; "this blood coagulation has participant this blood clot"@en, "this investigation has participant this investigator"@en, "this process has participant this input material (or this output material)"@en; "a relation between a process and a continuant, in which the continuant is somehow involved in the process"@en; "Has_participant is a primitive instance-level relation between a process, a continuant, and a time at which the continuant participates in some way in the process. The relation obtains, for example, when this particular process of oxygen exchange across this particular alveolar membrane has_participant this particular sample of hemoglobin at this particular time."@en; "has_participant"@en; , ; "http://www.obofoundry.org/ro/#OBO_REL:has_participant"; "http://www.obofoundry.org/ro/#OBO_REL:has_participant"; rdfs:label "has participant"@en . _:42b1e0 rdf:first ; rdf:rest _:42b1f0 . _:42b1f0 rdf:first ; rdf:rest _:42b200 . _:42b200 rdf:first ; rdf:rest rdf:nil . _:42b210 rdf:first ; rdf:rest _:42b220 . _:42b220 rdf:first ; rdf:rest rdf:nil . a owl:ObjectProperty; owl:equivalentProperty _:42b230; owl:inverseOf ; rdfs:domain ; rdfs:range ; "A journal article is an information artifact that inheres in some number of printed journals. For each copy of the printed journal there is some quality that carries the journal article, such as a pattern of ink. The journal article (a generically dependent continuant) is concretized as the quality (a specifically dependent continuant), and both depend on that copy of the printed journal (an independent continuant)."@en, "An investigator reads a protocol and forms a plan to carry out an assay. The plan is a realizable entity (a specifically dependent continuant) that concretizes the protocol (a generically dependent continuant), and both depend on the investigator (an independent continuant). The plan is then realized by the assay (a process)."@en; "A relationship between a generically dependent continuant and a specifically dependent continuant, in which the generically dependent continuant depends on some independent continuant in virtue of the fact that the specifically dependent continuant also depends on that same independent continuant. A generically dependent continuant may be concretized as multiple specifically dependent continuants."@en; ; rdfs:label "is concretized as"@en . _:42b230 owl:inverseOf . a owl:ObjectProperty; rdfs:domain ; rdfs:range ; "A journal article is an information artifact that inheres in some number of printed journals. For each copy of the printed journal there is some quality that carries the journal article, such as a pattern of ink. The quality (a specifically dependent continuant) concretizes the journal article (a generically dependent continuant), and both depend on that copy of the printed journal (an independent continuant)."@en, "An investigator reads a protocol and forms a plan to carry out an assay. The plan is a realizable entity (a specifically dependent continuant) that concretizes the protocol (a generically dependent continuant), and both depend on the investigator (an independent continuant). The plan is then realized by the assay (a process)."@en; "A relationship between a specifically dependent continuant and a generically dependent continuant, in which the generically dependent continuant depends on some independent continuant in virtue of the fact that the specifically dependent continuant also depends on that same independent continuant. Multiple specifically dependent continuants can concretize the same generically dependent continuant."@en; ; rdfs:label "concretizes"@en . a owl:ObjectProperty; owl:equivalentProperty _:42b240; rdfs:subPropertyOf ; owl:inverseOf ; rdfs:domain ; "this catalysis function is a function of this enzyme"@en; "a relation between a function and an independent continuant (the bearer), in which the function specifically depends on the bearer for its existence"@en; "A function inheres in its bearer at all times for which the function exists, however the function need not be realized at all the times that the function exists."@en; "function_of"@en, "is function of"@en; ; rdfs:label "function of"@en . _:42b240 owl:inverseOf . a owl:ObjectProperty; owl:equivalentProperty _:42b250; rdfs:subPropertyOf ; owl:inverseOf ; "this investigator role is a role of this person"@en; "a relation between a role and an independent continuant (the bearer), in which the role specifically depends on the bearer for its existence"@en; "A role inheres in its bearer at all times for which the role exists, however the role need not be realized at all the times that the role exists."@en; "is role of"@en, "role_of"@en; ; rdfs:label "role of"@en . _:42b250 owl:inverseOf . a owl:ObjectProperty; rdfs:subPropertyOf ; rdfs:domain ; rdfs:range ; "this enzyme has function this catalysis function (more colloquially: this enzyme has this catalysis function)"@en; "a relation between an independent continuant (the bearer) and a function, in which the function specifically depends on the bearer for its existence"@en; "A bearer can have many functions, and its functions can exist for different periods of time, but none of its functions can exist when the bearer does not exist. A function need not be realized at all the times that the function exists."@en; "has_function"@en; ; rdfs:label "has function"@en . a owl:ObjectProperty; rdfs:subPropertyOf ; rdfs:range ; "this apple has quality this red color"@en; "a relation between an independent continuant (the bearer) and a quality, in which the quality specifically depends on the bearer for its existence"@en; "A bearer can have many qualities, and its qualities can exist for different periods of time, but none of its qualities can exist when the bearer does not exist."@en; "has_quality"@en; ; rdfs:label "has quality"@en . a owl:ObjectProperty; rdfs:subPropertyOf ; rdfs:domain ; rdfs:range ; "this person has role this investigator role (more colloquially: this person has this role of investigator)"@en; "a relation between an independent continuant (the bearer) and a role, in which the role specifically depends on the bearer for its existence"@en; "A bearer can have many roles, and its roles can exist for different periods of time, but none of its roles can exist when the bearer does not exist. A role need not be realized at all the times that the role exists."@en; "has_role"@en; , ; rdfs:label "has role"@en . a owl:ObjectProperty; rdfs:subPropertyOf ; owl:inverseOf ; rdfs:domain ; rdfs:range ; "a relation between an independent continuant (the bearer) and a disposition, in which the disposition specifically depends on the bearer for its existence"@en; ; rdfs:label "has disposition"@en . a owl:ObjectProperty; rdfs:subPropertyOf ; "inverse of has disposition"; ; ; rdfs:comment "This relation is modeled after the BFO relation of the same name which was in BFO2, but is used in a more restricted sense - specifically, we model this relation as functional (inherited from characteristic-of). Note that this relation is now removed from BFO2020."; rdfs:label "disposition of"@en . a owl:ObjectProperty; owl:equivalentProperty _:42b260; rdfs:subPropertyOf owl:topObjectProperty; owl:inverseOf ; rdfs:domain ; rdfs:range ; "derives from"; "this cell derives from this parent cell (cell division)"@en, "this nucleus derives from this parent nucleus (nuclear division)"@en; ; "a relation between two distinct material entities, the new entity and the old entity, in which the new entity begins to exist when the old entity ceases to exist, and the new entity inherits the significant portion of the matter of the old entity"@en; "This is a very general relation. More specific relations are preferred when applicable, such as 'directly develops from'."@en; "derives_from"@en; , ; rdfs:label "derives from"@en . _:42b260 owl:inverseOf . a owl:ObjectProperty; "this parent cell derives into this cell (cell division)"@en, "this parent nucleus derives into this nucleus (nuclear division)"@en; ; "a relation between two distinct material entities, the old entity and the new entity, in which the new entity begins to exist when the old entity ceases to exist, and the new entity inherits the significant portion of the matter of the old entity"@en; "This is a very general relation. More specific relations are preferred when applicable, such as 'directly develops into'. To avoid making statements about a future that may not come to pass, it is often better to use the backward-looking 'derives from' rather than the forward-looking 'derives into'."@en; "derives_into"@en; ; rdfs:label "derives into"@en . a owl:ObjectProperty, owl:TransitiveProperty; rdfs:domain , _:42b270; rdfs:range , _:42b2b0; owl:propertyChainAxiom _:42b2f0; "located in"@en; "my brain is located in my head"@en, "this rat is located in this cage"@en; "a relation between two independent continuants, the target and the location, in which the target is entirely within the location"@en; "Location as a relation between instances: The primitive instance-level relation c located_in r at t reflects the fact that each continuant is at any given time associated with exactly one spatial region, namely its exact location. Following we can use this relation to define a further instance-level location relation - not between a continuant and the region which it exactly occupies, but rather between one continuant and another. c is located in c1, in this sense, whenever the spatial region occupied by c is part_of the spatial region occupied by c1. Note that this relation comprehends both the relation of exact location between one continuant and another which obtains when r and r1 are identical (for example, when a portion of fluid exactly fills a cavity), as well as those sorts of inexact location relations which obtain, for example, between brain and head or between ovum and uterus"@en, "Most location relations will only hold at certain times, but this is difficult to specify in OWL. See http://purl.obolibrary.org/obo/ro/docs/temporal-semantics/"@en; "located_in"@en; ; ; "http://www.obofoundry.org/ro/#OBO_REL:located_in"; ; rdfs:label "located in"@en; rdfs:seeAlso "https://wiki.geneontology.org/Located_in"^^xsd:anyURI . _:42b270 a owl:Class; owl:intersectionOf _:42b280 . _:42b280 rdf:first ; rdf:rest _:42b2a0 . _:42b2a0 rdf:first _:42b290; rdf:rest rdf:nil . _:42b290 a owl:Class; owl:complementOf . _:42b2b0 a owl:Class; owl:intersectionOf _:42b2c0 . _:42b2c0 rdf:first ; rdf:rest _:42b2e0 . _:42b2e0 rdf:first _:42b2d0; rdf:rest rdf:nil . _:42b2d0 a owl:Class; owl:complementOf . _:42b2f0 rdf:first ; rdf:rest _:42b300 . _:42b300 rdf:first ; rdf:rest rdf:nil . a owl:ObjectProperty; rdfs:subPropertyOf ; ; ; "2017-05-24T09:44:33Z"^^xsd:dateTime; rdfs:comment "A 'has component activity' B if A is A and B are molecular functions (GO_0003674) and A has_component B."; rdfs:label "has component activity" . a owl:ObjectProperty; rdfs:subPropertyOf ; rdfs:domain ; rdfs:range ; "w 'has process component' p if p and w are processes, w 'has part' p and w is such that it can be directly disassembled into into n parts p, p2, p3, ..., pn, where these parts are of similar type."; ; ; "2017-05-24T09:49:21Z"^^xsd:dateTime; rdfs:label "has component process" . a owl:ObjectProperty, owl:FunctionalProperty; rdfs:subPropertyOf ; "A 'has effector activity' B if A and B are GO molecular functions (GO_0003674), A 'has component activity' B and B is the effector (output function) of B. Each compound function has only one effector activity."; ; ; "2017-09-22T14:14:36Z"^^xsd:dateTime; rdfs:comment "This relation is designed for constructing compound molecular functions, typically in combination with one or more regulatory component activity relations."; rdfs:label "has effector activity" . a owl:ObjectProperty; rdfs:subPropertyOf ; ; "<="@en; ; ; rdfs:comment "Primitive instance level timing relation between events"; rdfs:label "before or simultaneous with"@en . a owl:ObjectProperty, owl:SymmetricProperty, owl:TransitiveProperty; rdfs:subPropertyOf ; "x simultaneous with y iff ω(x) = ω(y) and ω(α ) = ω(α), where α is a function that maps a process to a start point, and ω is a function that maps a process to an end point and '=' indicates the same instance in time."; ; ; ; rdfs:comment "t1 simultaneous_with t2 iff:= t1 before_or_simultaneous_with t2 and not (t1 before t2)"@en; rdfs:label "simultaneous with"@en . a owl:ObjectProperty, owl:TransitiveProperty; rdfs:subPropertyOf ; ; ; ; rdfs:comment "t1 before t2 iff:= t1 before_or_simulataneous_with t2 and not (t1 simultaeous_with t2)"@en; rdfs:label "before"@en . a owl:ObjectProperty; rdfs:subPropertyOf ; owl:inverseOf ; ; ; ; rdfs:comment "Previously had ID http://purl.obolibrary.org/obo/RO_0002122 in test files in sandpit - but this seems to have been dropped from ro-edit.owl at some point. No re-use under this ID AFAIK, but leaving note here in case we run in to clashes down the line. Official ID now chosen from DOS ID range."; rdfs:label "during which ends"@en . a owl:ObjectProperty, owl:TransitiveProperty; rdfs:subPropertyOf ; owl:inverseOf ; ; "di"; ; rdfs:comment "Previously had ID http://purl.obolibrary.org/obo/RO_0002124 in test files in sandpit - but this seems to have been dropped from ro-edit.owl at some point. No re-use under this ID AFAIK, but leaving note here in case we run in to clashes down the line. Official ID now chosen from DOS ID range."; rdfs:label "encompasses"@en . a owl:ObjectProperty, owl:TransitiveProperty; rdfs:subPropertyOf ; owl:propertyChainAxiom _:42b310; ; ; ; rdfs:comment "X ends_after Y iff: end(Y) before_or_simultaneous_with end(X)"@en; rdfs:label "ends after"@en . _:42b310 rdf:first ; rdf:rest _:42b320 . _:42b320 rdf:first ; rdf:rest rdf:nil . a owl:ObjectProperty; rdfs:subPropertyOf ; owl:inverseOf ; owl:propertyChainAxiom _:42b330; ; "starts_at_end_of"; ; rdfs:comment "X immediately_preceded_by Y iff: end(X) simultaneous_with start(Y)"@en; rdfs:label "immediately preceded by"@en . _:42b330 rdf:first ; rdf:rest _:42b340 . _:42b340 rdf:first ; rdf:rest rdf:nil . a owl:ObjectProperty; rdfs:subPropertyOf ; owl:inverseOf ; ; ; ; rdfs:comment "Previously had ID http://purl.obolibrary.org/obo/RO_0002123 in test files in sandpit - but this seems to have been dropped from ro-edit.owl at some point. No re-use under this ID AFAIK, but leaving note here in case we run in to clashes down the line. Official ID now chosen from DOS ID range."; rdfs:label "during which starts"@en . a owl:ObjectProperty, owl:TransitiveProperty; rdfs:subPropertyOf ; owl:propertyChainAxiom _:42b350; ; ; ; rdfs:label "starts before"@en . _:42b350 rdf:first ; rdf:rest _:42b360 . _:42b360 rdf:first ; rdf:rest rdf:nil . a owl:ObjectProperty; rdfs:subPropertyOf ; owl:propertyChainAxiom _:42b370; ; "ends_at_start_of", "meets"; ; ; ; rdfs:comment "X immediately_precedes_Y iff: end(X) simultaneous_with start(Y)"@en; rdfs:label "immediately precedes"@en . _:42b370 rdf:first ; rdf:rest _:42b380 . _:42b380 rdf:first ; rdf:rest rdf:nil . a owl:ObjectProperty; rdfs:subPropertyOf ; rdfs:domain ; rdfs:range ; ; "io"; ; ; rdfs:comment "X starts_during Y iff: (start(Y) before_or_simultaneous_with start(X)) AND (start(X) before_or_simultaneous_with end(Y))"@en; rdfs:label "starts during"@en . a owl:ObjectProperty, owl:TransitiveProperty; rdfs:subPropertyOf , ; ; "d", "during"; ; , , , ; rdfs:comment "X happens_during Y iff: (start(Y) before_or_simultaneous_with start(X)) AND (end(X) before_or_simultaneous_with end(Y))"@en; rdfs:label "happens during"@en; rdfs:seeAlso "https://wiki.geneontology.org/Happens_during"^^xsd:anyURI . a owl:ObjectProperty; rdfs:subPropertyOf ; ; "o", "overlaps"; ; ; rdfs:comment "X ends_during Y iff: ((start(Y) before_or_simultaneous_with end(X)) AND end(X) before_or_simultaneous_with end(Y). "@en; rdfs:label "ends during"@en . a owl:ObjectProperty, owl:SymmetricProperty; rdfs:subPropertyOf ; owl:propertyChainAxiom _:42b390, _:42b3b0, _:42b3d0, _:42b3f0; ; "x overlaps y if and only if there exists some z such that x has part z and z part of y"; ; "http://purl.obolibrary.org/obo/BFO_0000051 some (http://purl.obolibrary.org/obo/BFO_0000050 some ?Y)"; ; , , ; rdfs:label "overlaps"@en . _:42b390 rdf:first ; rdf:rest _:42b3a0 . _:42b3a0 rdf:first ; rdf:rest rdf:nil . _:42b3b0 rdf:first ; rdf:rest _:42b3c0 . _:42b3c0 rdf:first ; rdf:rest rdf:nil . _:42b3d0 rdf:first ; rdf:rest _:42b3e0 . _:42b3e0 rdf:first ; rdf:rest rdf:nil . _:42b3f0 rdf:first ; rdf:rest _:42b400 . _:42b400 rdf:first ; rdf:rest rdf:nil . a owl:ObjectProperty; rdfs:subPropertyOf ; ; "w 'has component' p if w 'has part' p and w is such that it can be directly disassembled into into n parts p, p2, p3, ..., pn, where these parts are of similar type."; "The definition of 'has component' is still under discussion. The challenge is in providing a definition that does not imply transitivity."; "For use in recording has_part with a cardinality constraint, because OWL does not permit cardinality constraints to be used in combination with transitive object properties. In situations where you would want to say something like 'has part exactly 5 digit, you would instead use has_component exactly 5 digit."@en; ; ; ; rdfs:label "has component"@en; rdfs:seeAlso . a owl:ObjectProperty; rdfs:subPropertyOf ; owl:inverseOf ; rdfs:domain _:42b410; rdfs:range ; ; "A relationship that holds between a biological entity and a phenotype. Here a phenotype is construed broadly as any kind of quality of an organism part, a collection of these qualities, or a change in quality or qualities (e.g. abnormally increased temperature). The subject of this relationship can be an organism (where the organism has the phenotype, i.e. the qualities inhere in parts of this organism), a genomic entity such as a gene or genotype (if modifications of the gene or the genotype causes the phenotype), or a condition such as a disease (such that if the condition inheres in an organism, then the organism has the phenotype)."; ; ; ; rdfs:label "has phenotype"@en . _:42b410 a owl:Class; owl:unionOf _:42b420 . _:42b420 rdf:first ; rdf:rest _:42b430 . _:42b430 rdf:first ; rdf:rest _:42b440 . _:42b440 rdf:first ; rdf:rest rdf:nil . a owl:ObjectProperty, owl:FunctionalProperty; ; "inverse of has phenotype"; ; ; , ; rdfs:label "phenotype of"@en . a owl:ObjectProperty, owl:TransitiveProperty; rdfs:subPropertyOf ; owl:inverseOf ; rdfs:domain ; rdfs:range ; owl:propertyChainAxiom _:42b450, _:42b470, _:42b490; "p regulates q iff p is causally upstream of q, the execution of p is not constant and varies according to specific conditions, and p influences the rate or magnitude of execution of q due to an effect either on some enabler of q or some enabler of a part of q."; , , ; , "GO"; "Regulation precludes parthood; the regulatory process may not be within the regulated process."; ; "regulates (processual)"; false; , , ; rdfs:label "regulates"@en . _:42b450 rdf:first ; rdf:rest _:42b460 . _:42b460 rdf:first ; rdf:rest rdf:nil . _:42b470 rdf:first ; rdf:rest _:42b480 . _:42b480 rdf:first ; rdf:rest rdf:nil . _:42b490 rdf:first ; rdf:rest _:42b4a0 . _:42b4a0 rdf:first ; rdf:rest rdf:nil . a owl:ObjectProperty; rdfs:subPropertyOf , ; owl:inverseOf ; owl:propertyChainAxiom _:42b4b0; "p negatively regulates q iff p regulates q, and p decreases the rate or magnitude of execution of q."; ; ; ; "negatively regulates (process to process)"; ; , , ; rdfs:label "negatively regulates"@en . _:42b4b0 rdf:first ; rdf:rest _:42b4c0 . _:42b4c0 rdf:first ; rdf:rest rdf:nil . a owl:ObjectProperty, owl:TransitiveProperty; rdfs:subPropertyOf , ; owl:inverseOf ; owl:propertyChainAxiom _:42b4d0, _:42b4f0; "p positively regulates q iff p regulates q, and p increases the rate or magnitude of execution of q."; ; ; ; "positively regulates (process to process)"; ; , , ; rdfs:label "positively regulates"@en . _:42b4d0 rdf:first ; rdf:rest _:42b4e0 . _:42b4e0 rdf:first ; rdf:rest rdf:nil . _:42b4f0 rdf:first ; rdf:rest _:42b500 . _:42b500 rdf:first ; rdf:rest rdf:nil . a owl:ObjectProperty; rdfs:domain _:42b510; "'human p53 protein' SubClassOf some ('has prototype' some ('participates in' some 'DNA repair'))", "heart SubClassOf 'has prototype' some ('participates in' some 'blood circulation')"; ; "x has prototype y if and only if x is an instance of C and y is a prototypical instance of C. For example, every instance of heart, both normal and abnormal is related by the has prototype relation to some instance of a \"canonical\" heart, which participates in blood circulation."; "Experimental. In future there may be a formalization in which this relation is treated as a shortcut to some modal logic axiom. We may decide to obsolete this and adopt a more specific evolutionary relationship (e.g. evolved from)", "TODO: add homeomorphy axiom", "This property can be used to make weaker forms of certain relations by chaining an additional property. For example, we may say: retina SubClassOf has_prototype some 'detection of light'. i.e. every retina is related to a prototypical retina instance which is detecting some light. Note that this is very similar to 'capable of', but this relation affords a wider flexibility. E.g. we can make a relation between continuants."; ; ; rdfs:label "has prototype"@en . _:42b510 a owl:Class; owl:unionOf _:42b520 . _:42b520 rdf:first ; rdf:rest _:42b530 . _:42b530 rdf:first ; rdf:rest rdf:nil . a owl:ObjectProperty; rdfs:domain ; rdfs:range ; ; ; ; "Do not use this relation directly. It is ended as a grouping for relations between occurrents involving the relative timing of their starts and ends."; ; "https://docs.google.com/document/d/1kBv1ep_9g3sTR-SD3jqzFqhuwo9TPNF-l-9fUDbO6rM/edit?pli=1"^^xsd:anyURI; ; rdfs:comment "A relation that holds between two occurrents. This is a grouping relation that collects together all the Allen relations."; rdfs:label "temporally related to"@en . a owl:ObjectProperty; rdfs:subPropertyOf , ; owl:inverseOf ; ; "inverse of starts with"; , "Chris Mungall"; "Allen"; , ; ; rdfs:label "starts"@en . a owl:ObjectProperty, owl:TransitiveProperty; rdfs:subPropertyOf , ; "Every insulin receptor signaling pathway starts with the binding of a ligand to the insulin receptor"; ; "x starts with y if and only if x has part y and the time point at which x starts is equivalent to the time point at which y starts. Formally: α(y) = α(x) ∧ ω(y) < ω(x), where α is a function that maps a process to a start point, and ω is a function that maps a process to an end point."; ; "started by"; ; ; rdfs:label "starts with"@en . a owl:ObjectProperty; rdfs:subPropertyOf , ; owl:inverseOf ; ; "inverse of ends with"; ; ; ; rdfs:label "ends"@en . a owl:ObjectProperty, owl:TransitiveProperty; rdfs:subPropertyOf , ; ; "x ends with y if and only if x has part y and the time point at which x ends is equivalent to the time point at which y ends. Formally: α(y) > α(x) ∧ ω(y) = ω(x), where α is a function that maps a process to a start point, and ω is a function that maps a process to an end point."; ; "finished by"; ; ; rdfs:label "ends with"@en . a owl:ObjectProperty; rdfs:subPropertyOf ; owl:inverseOf ; rdfs:domain ; owl:propertyChainAxiom _:42b540; ; "p has input c iff: p is a process, c is a material entity, c is a participant in p, c is present at the start of p, and the state of c is modified during p."; ; "consumes"; ; , , , ; rdfs:label "has input"@en; rdfs:seeAlso "https://wiki.geneontology.org/Has_input"^^xsd:anyURI . _:42b540 rdf:first ; rdf:rest _:42b550 . _:42b550 rdf:first ; rdf:rest rdf:nil . a owl:ObjectProperty; rdfs:subPropertyOf ; owl:inverseOf ; owl:propertyChainAxiom _:42b560; ; "p has output c iff c is a participant in p, c is present at the end of p, and c is not present in the same state at the beginning of p."; ; "produces"; ; , , , ; rdfs:label "has output"@en; rdfs:seeAlso "https://wiki.geneontology.org/Has_output"^^xsd:anyURI . _:42b560 rdf:first ; rdf:rest _:42b570 . _:42b570 rdf:first ; rdf:rest rdf:nil . a owl:ObjectProperty; rdfs:subPropertyOf , ; "p is causally upstream of, positive effect q iff p is casually upstream of q, and the execution of p is required for the execution of q."; ; ; ; , ; rdfs:comment "holds between x and y if and only if x is causally upstream of y and the progression of x increases the frequency, rate or extent of y"; rdfs:label "causally upstream of, positive effect"; rdfs:seeAlso . a owl:ObjectProperty; rdfs:subPropertyOf , ; "p is causally upstream of, negative effect q iff p is casually upstream of q, and the execution of p decreases the execution of q."; ; ; ; , ; rdfs:label "causally upstream of, negative effect"; rdfs:seeAlso . a owl:ObjectProperty; rdfs:subPropertyOf ; owl:propertyChainAxiom _:42b580, _:42b5a0; "q characteristic of part of w if and only if there exists some p such that q inheres in p and p part of w."; "Because part_of is transitive, inheres in is a sub-relation of characteristic of part of"; ; "inheres in part of"; ; ; ; rdfs:label "characteristic of part of"@en; rdfs:seeAlso . _:42b580 rdf:first ; rdf:rest _:42b590 . _:42b590 rdf:first ; rdf:rest rdf:nil . _:42b5a0 rdf:first ; rdf:rest _:42b5b0 . _:42b5b0 rdf:first ; rdf:rest rdf:nil . a owl:ObjectProperty; "A relationship that is mediated in some way by the environment or environmental feature (ENVO:00002297)"; "Awaiting class for domain/range constraint, see: https://github.com/OBOFoundry/Experimental-OBO-Core/issues/6"; ; "Do not use this relation directly. It is intended as a grouping for a diverse set of relations, all involving ecological interactions"; ; ; rdfs:label "ecologically related to"@en . a owl:ObjectProperty; "A mereological relationship or a topological relationship"; ; "Do not use this relation directly. It is ended as a grouping for a diverse set of relations, all involving parthood or connectivity relationships"; ; ; rdfs:label "mereotopologically related to"@en . a owl:ObjectProperty; "A grouping relationship for any relationship directly involving a function, or that holds because of a function of one of the related entities."; ; "This is a grouping relation that collects relations used for the purpose of connecting structure and function"; ; rdfs:label "functionally related to"@en . a owl:ObjectProperty, owl:TransitiveProperty; rdfs:subPropertyOf ; rdfs:domain ; rdfs:range ; "inverse of regulates"; ; ; "regulated by (processual)"; ; rdfs:label "regulated by"@en . a owl:ObjectProperty; rdfs:subPropertyOf ; "inverse of negatively regulates"; ; ; ; rdfs:label "negatively regulated by"@en . a owl:ObjectProperty; rdfs:subPropertyOf ; "inverse of positively regulates"; ; ; ; rdfs:label "positively regulated by"@en . a owl:ObjectProperty, owl:IrreflexiveProperty; rdfs:subPropertyOf ; "has member is a mereological relation between a collection and an item."; "SIO"; ; ; rdfs:label "has member"@en . a owl:ObjectProperty; rdfs:subPropertyOf , ; "inverse of has input"; ; ; , ; rdfs:label "input of"@en . a owl:ObjectProperty; rdfs:subPropertyOf , ; "inverse of has output"; ; ; , ; rdfs:label "output of"@en . a owl:ObjectProperty; rdfs:subPropertyOf , ; owl:inverseOf ; ; "inverse of upstream of"; ; ; rdfs:label "causally downstream of"@en . a owl:ObjectProperty; rdfs:subPropertyOf , ; owl:inverseOf ; ; ; ; rdfs:label "immediately causally downstream of"@en . a owl:ObjectProperty, owl:TransitiveProperty; rdfs:subPropertyOf , ; owl:propertyChainAxiom _:42b5c0, _:42b5e0, _:42b600, _:42b620 . _:42b5c0 rdf:first ; rdf:rest _:42b5d0 . _:42b5d0 rdf:first ; rdf:rest rdf:nil . _:42b5e0 rdf:first ; rdf:rest _:42b5f0 . _:42b5f0 rdf:first ; rdf:rest rdf:nil . _:42b600 rdf:first ; rdf:rest _:42b610 . _:42b610 rdf:first ; rdf:rest rdf:nil . _:42b620 rdf:first ; rdf:rest _:42b630 . _:42b630 rdf:first ; rdf:rest rdf:nil . "p indirectly positively regulates q iff p is indirectly causally upstream of q and p positively regulates q."; ; "indirectly activates"; ; ; rdfs:label "indirectly positively regulates"@en; rdfs:seeAlso "https://wiki.geneontology.org/Indirectly_positively_regulates"^^xsd:anyURI . a owl:ObjectProperty, owl:TransitiveProperty; rdfs:subPropertyOf , ; owl:propertyChainAxiom _:42b640, _:42b660, _:42b680; "p indirectly negatively regulates q iff p is indirectly causally upstream of q and p negatively regulates q."; ; "indirectly inhibits"; ; ; rdfs:label "indirectly negatively regulates"@en; rdfs:seeAlso "https://wiki.geneontology.org/Indirectly_negatively_regulates"^^xsd:anyURI . _:42b640 rdf:first ; rdf:rest _:42b650 . _:42b650 rdf:first ; rdf:rest rdf:nil . _:42b660 rdf:first ; rdf:rest _:42b670 . _:42b670 rdf:first ; rdf:rest rdf:nil . _:42b680 rdf:first ; rdf:rest _:42b690 . _:42b690 rdf:first ; rdf:rest rdf:nil . a owl:ObjectProperty; "relation that links two events, processes, states, or objects such that one event, process, state, or object (a cause) contributes to the production of another event, process, state, or object (an effect) where the cause is partly or wholly responsible for the effect, and the effect is partly or wholly dependent on the cause."; """This branch of the ontology deals with causal relations between entities. It is divided into two branches: causal relations between occurrents/processes, and causal relations between material entities. We take an 'activity flow-centric approach', with the former as primary, and define causal relations between material entities in terms of causal relations between occurrents. To define causal relations in an activity-flow type network, we make use of 3 primitives: * Temporal: how do the intervals of the two occurrents relate? * Is the causal relation regulatory? * Is the influence positive or negative? The first of these can be formalized in terms of the Allen Interval Algebra. Informally, the 3 bins we care about are 'direct', 'indirect' or overlapping. Note that all causal relations should be classified under a RO temporal relation (see the branch under 'temporally related to'). Note that all causal relations are temporal, but not all temporal relations are causal. Two occurrents can be related in time without being causally connected. We take causal influence to be primitive, elucidated as being such that has the upstream changed, some qualities of the donwstream would necessarily be modified. For the second, we consider a relationship to be regulatory if the system in which the activities occur is capable of altering the relationship to achieve some objective. This could include changing the rate of production of a molecule. For the third, we consider the effect of the upstream process on the output(s) of the downstream process. If the level of output is increased, or the rate of production of the output is increased, then the direction is increased. Direction can be positive, negative or neutral or capable of either direction. Two positives in succession yield a positive, two negatives in succession yield a positive, otherwise the default assumption is that the net effect is canceled and the influence is neutral. Each of these 3 primitives can be composed to yield a cross-product of different relation types."""; ; "Do not use this relation directly. It is intended as a grouping for a diverse set of relations, all involving cause and effect."; ; rdfs:label "causally related to"@en . a owl:ObjectProperty, owl:TransitiveProperty; rdfs:subPropertyOf , ; "p is causally upstream of q iff p is causally related to q, the end of p precedes the end of q, and p is not an occurrent part of q."; ; ; , ; rdfs:label "causally upstream of"@en . a owl:ObjectProperty; rdfs:subPropertyOf , ; "p is immediately causally upstream of q iff p is causally upstream of q, and the end of p is coincident with the beginning of q."; ; ; ; rdfs:label "immediately causally upstream of"@en . a owl:ObjectProperty; rdfs:subPropertyOf , ; owl:propertyChainAxiom _:42b6a0; "p provides input for q iff p is immediately causally upstream of q, and there exists some c such that p has_output c and q has_input c."; ; "directly provides input for"; ; ; "directly provides input for (process to process)"; rdfs:label "provides input for"@en; rdfs:seeAlso "https://wiki.geneontology.org/Provides_input_for"^^xsd:anyURI . _:42b6a0 rdf:first ; rdf:rest _:42b6b0 . _:42b6b0 rdf:first ; rdf:rest rdf:nil . a owl:ObjectProperty, owl:TransitiveProperty; rdfs:subPropertyOf ; rdfs:domain ; rdfs:range ; ; "transitive form of directly_provides_input_for"; ; "This is a grouping relation that should probably not be used in annotation. Consider instead the child relation 'provides input for'."; ; "transitively provides input for (process to process)"; rdfs:label "transitively provides input for"@en . a owl:ObjectProperty, owl:TransitiveProperty; rdfs:subPropertyOf ; owl:inverseOf ; owl:propertyChainAxiom _:42b6c0; "p is 'causally upstream or within' q iff p is causally related to q, and the end of p precedes, or is coincident with, the end of q."; "We would like to make this disjoint with 'preceded by', but this is prohibited in OWL2"; ; "influences (processual)"; ; "affects"; rdfs:label "causally upstream of or within" . _:42b6c0 rdf:first ; rdf:rest _:42b6d0 . _:42b6d0 rdf:first ; rdf:rest rdf:nil . a owl:ObjectProperty, owl:TransitiveProperty; rdfs:subPropertyOf ; "inverse of causally upstream of or within"; ; ; ; ; rdfs:label "causally downstream of or within" . a owl:ObjectProperty, owl:SymmetricProperty; rdfs:domain ; rdfs:range ; "A relationship that holds between two entities in which the processes executed by the two entities are causally connected."; "This relation and all sub-relations can be applied to either (1) pairs of entities that are interacting at any moment of time (2) populations or species of entity whose members have the disposition to interact (3) classes whose members have the disposition to interact.", "Considering relabeling as 'pairwise interacts with'"^^xsd:anyURI; ; "Note that this relationship type, and sub-relationship types may be redundant with process terms from other ontologies. For example, the symbiotic relationship hierarchy parallels GO. The relations are provided as a convenient shortcut. Consider using the more expressive processual form to capture your data. In the future, these relations will be linked to their cognate processes through rules."; ; "in pairwise interaction with"; ; rdfs:label "interacts with"; rdfs:seeAlso "http://purl.obolibrary.org/obo/ro/docs/interaction-relations/"^^xsd:anyURI; "http://purl.obolibrary.org/obo/MI_0914"^^xsd:anyURI . a owl:ObjectProperty, owl:SymmetricProperty; rdfs:subPropertyOf , ; rdfs:domain ; rdfs:range ; "An interaction relationship in which at least one of the partners is an organism and the other is either an organism or an abiotic entity with which the organism interacts."; ; "interacts with on organism level"; ; ; rdfs:label "biotically interacts with"; rdfs:seeAlso , "http://eol.org/schema/terms/interactsWith" . a owl:ObjectProperty, owl:SymmetricProperty; rdfs:subPropertyOf ; owl:propertyChainAxiom _:42b6e0; "whales symbiotically interact with the barnacles that attach to them"; "A biotic interaction in which the two organisms live together in more or less intimate association."; ; "http://www.ncbi.nlm.nih.gov/pubmed/19278549"^^xsd:anyURI; "We follow GO and PAMGO in using 'symbiosis' as the broad term encompassing mutualism through parasitism"; ; ; rdfs:label "symbiotically interacts with" . _:42b6e0 rdf:first ; rdf:rest _:42b6f0 . _:42b6f0 rdf:first ; rdf:rest _:42b710 . _:42b710 rdf:first _:42b700; rdf:rest rdf:nil . _:42b700 owl:inverseOf . a owl:ObjectProperty; rdfs:subPropertyOf ; "X 'has host' y if and only if: x is an organism, y is an organism, and x can live on the surface of or within the body of y"; ; ; ; rdfs:label "has host"; rdfs:seeAlso "http://eol.org/schema/terms/hasHost" . a owl:ObjectProperty; rdfs:subPropertyOf ; ; "Experimental: relation used for defining interaction relations. An interaction relation holds when there is an interaction event with two partners. In a directional interaction, one partner is deemed the subject, the other the target"; ; rdfs:label "partner in" . a owl:ObjectProperty; ; "This property or its subproperties is not to be used directly. These properties exist as helper properties that are used to support OWL reasoning."; ; rdfs:label "helper property (not for use in curation)" . a owl:ObjectProperty; rdfs:subPropertyOf ; ; ; rdfs:label "is symbiosis" . a owl:ObjectProperty; rdfs:subPropertyOf ; rdfs:domain ; rdfs:range ; "p is causally related to q if and only if p or any part of p and q or any part of q are linked by a chain of events where each event pair is one where the execution of p influences the execution of q. p may be upstream, downstream, part of, or a container of q."; ; ; "Do not use this relation directly. It is intended as a grouping for a diverse set of relations, all involving cause and effect."; ; rdfs:label "causal relation between processes" . a owl:ObjectProperty; ; ; rdfs:label "depends on"; rdfs:seeAlso . a owl:ObjectProperty; rdfs:subPropertyOf ; ; ; rdfs:label "interaction relation helper property"; rdfs:seeAlso , "http://purl.obolibrary.org/obo/ro/docs/interaction-relations/"^^xsd:anyURI . a owl:ObjectProperty; rdfs:subPropertyOf ; rdfs:domain ; rdfs:range ; ; ; ; rdfs:label "participates in a biotic-biotic interaction with"; rdfs:seeAlso . a owl:ObjectProperty; rdfs:subPropertyOf , ; "p directly regulates q iff p is immediately causally upstream of q and p regulates q."; ; ; ; "directly regulates (processual)"; ; , , ; rdfs:label "directly regulates" . a owl:ObjectProperty; rdfs:subPropertyOf , ; "p directly positively regulates q iff p is immediately causally upstream of q, and p positively regulates q."; ; ; "directly positively regulates (process to process)"; ; , , ; rdfs:label "directly positively regulates"; rdfs:seeAlso "https://wiki.geneontology.org/Directly_positively_regulates"^^xsd:anyURI . a owl:ObjectProperty; rdfs:subPropertyOf , ; "p directly negatively regulates q iff p is immediately causally upstream of q, and p negatively regulates q."; ; ; "directly negatively regulates (process to process)"; ; , , ; rdfs:label "directly negatively regulates"; rdfs:seeAlso "https://wiki.geneontology.org/Directly_negatively_regulates"^^xsd:anyURI . a owl:ObjectProperty; owl:inverseOf ; rdfs:domain ; rdfs:range ; owl:propertyChainAxiom _:42b730; ; "a produces b if some process that occurs_in a has_output b, where a and b are material entities. Examples: hybridoma cell line produces monoclonal antibody reagent; chondroblast produces avascular GAG-rich matrix."; ; ; ; rdfs:comment "Note that this definition doesn't quite distinguish the output of a transformation process from a production process, which is related to the identity/granularity issue."; rdfs:label "produces"@en . _:42b730 rdf:first _:42b720; rdf:rest _:42b740 . _:42b720 owl:inverseOf . _:42b740 rdf:first ; rdf:rest rdf:nil . a owl:ObjectProperty; rdfs:domain ; rdfs:range ; ; "a produced_by b iff some process that occurs_in b has_output a."; ; ; ; rdfs:label "produced by"@en . a owl:ObjectProperty; rdfs:subPropertyOf ; ; ; ; "2018-03-13T23:55:05Z"^^xsd:dateTime; rdfs:label "causally upstream of or within, negative effect"; rdfs:seeAlso "https://wiki.geneontology.org/Causally_upstream_of_or_within,_negative_effect"^^xsd:anyURI . a owl:ObjectProperty; rdfs:subPropertyOf ; ; ; ; "2018-03-13T23:55:19Z"^^xsd:dateTime; rdfs:label "causally upstream of or within, positive effect"; rdfs:seeAlso . a owl:ObjectProperty; rdfs:subPropertyOf ; "p is constitutively upstream of q iff p is causally upstream of q, p is required for execution of q or a part of q, and the execution of p is approximately constant."; ; ; "2022-09-26T06:01:01Z"^^xsd:dateTime; , ; rdfs:label "constitutively upstream of"@en; rdfs:seeAlso "https://wiki.geneontology.org/Constitutively_upstream_of"^^xsd:anyURI . a owl:ObjectProperty; rdfs:subPropertyOf ; "p removes input for q iff p is causally upstream of q, there exists some c such that p has_input c and q has_input c, p reduces the levels of c, and c is rate limiting for execution of q."; ; ; "2022-09-26T06:06:20Z"^^xsd:dateTime; , ; rdfs:label "removes input for"@en; rdfs:seeAlso "https://wiki.geneontology.org/Removes_input_for"^^xsd:anyURI . a owl:ObjectProperty; rdfs:subPropertyOf ; "p is indirectly causally upstream of q iff p is causally upstream of q and there exists some process r such that p is causally upstream of r and r is causally upstream of q."; ; ; "2022-09-26T06:07:17Z"^^xsd:dateTime; rdfs:label "indirectly causally upstream of"@en . a owl:ObjectProperty; rdfs:subPropertyOf , ; "p indirectly regulates q iff p is indirectly causally upstream of q and p regulates q."; ; ; "2022-09-26T06:08:01Z"^^xsd:dateTime; rdfs:label "indirectly regulates"@en . a owl:ObjectProperty; "Do not use this relation directly. It is intended as a grouping for a set of relations regarding presentation of phenotypes and disease."; ; ; "2021-11-05T17:30:14Z"^^xsd:dateTime; rdfs:label "has phenotype or disease"; rdfs:seeAlso "https://github.com/oborel/obo-relations/issues/478" . a owl:ObjectProperty; rdfs:subPropertyOf ; "A relationship that holds between an organism and a disease. Here a disease is construed broadly as a disposition to undergo pathological processes that exists in an organism because of one or more disorders in that organism."; ; ; "2021-11-05T17:30:44Z"^^xsd:dateTime; rdfs:label "has disease"; rdfs:seeAlso "https://github.com/oborel/obo-relations/issues/478" . a owl:ObjectProperty; rdfs:domain ; "This property only applies to anatomical entities."; ; ; "2024-10-29T09:55:07Z"^^xsd:dateTime; rdfs:label "is anatomical entity" . a owl:ObjectProperty, owl:SymmetricProperty; "Relation between biological objects that resemble or are related to each other sufficiently to warrant a comparison."; "TODO: Add homeomorphy axiom"; ; , ; ; ; "ECO:0000041", "SO:similar_to"; "sameness", "similar to"; "correspondence", "resemblance"; rdfs:label "in similarity relationship with"; rdfs:seeAlso . a owl:DatatypeProperty, owl:FunctionalProperty; rdfs:subPropertyOf owl:topDataProperty; rdfs:domain ; rdfs:range xsd:double; ; rdfs:label "has measurement value"@en . a owl:DatatypeProperty; rdfs:subPropertyOf ; rdfs:domain ; rdfs:range owl:real; "has specified numeric value"; ; "A relation between a value specification and a number that quantifies it."; "A range of 'real' might be better than 'float'. For now we follow 'has measurement value' until we can consider technical issues with SPARQL queries and reasoning."; "PERSON: James A. Overton"; "OBI"; ; rdfs:label "has specified numeric value" . a owl:DatatypeProperty; rdfs:domain ; "has specified value"@en; ; "A relation between a value specification and a literal."; "This is not an RDF/OWL object property. It is intended to link a value found in e.g. a database column of 'M' (the literal) to an instance of a value specification class, which can then be linked to indicate that this is about the biological gender of a human subject."; "OBI"; ; rdfs:label "has specified value"@en . a owl:Class; rdfs:subClassOf owl:Thing; "entity"; "Entity"; "Julius Caesar"@en, "Verdi’s Requiem"@en, "the Second World War"@en, "your body mass index"@en; "BFO 2 Reference: In all areas of empirical inquiry we encounter general terms of two sorts. First are general terms which refer to universals or types:animaltuberculosissurgical procedurediseaseSecond, are general terms used to refer to groups of entities which instantiate a given universal but do not correspond to the extension of any subuniversal of that universal because there is nothing intrinsic to the entities in question by virtue of which they – and only they – are counted as belonging to the given group. Examples are: animal purchased by the Emperortuberculosis diagnosed on a Wednesdaysurgical procedure performed on a patient from Stockholmperson identified as candidate for clinical trial #2056-555person who is signatory of Form 656-PPVpainting by Leonardo da VinciSuch terms, which represent what are called ‘specializations’ in [81"@en, "Entity doesn't have a closure axiom because the subclasses don't necessarily exhaust all possibilites. For example Werner Ceusters 'portions of reality' include 4 sorts, entities (as BFO construes them), universals, configurations, and relations. It is an open question as to whether entities as construed in BFO will at some point also include these other portions of reality. See, for example, 'How to track absolutely everything' at http://www.referent-tracking.com/_RTU/papers/CeustersICbookRevised.pdf"@en; ; "An entity is anything that exists or has existed or will exist. (axiom label in BFO2 Reference: [001-001])"@en; rdfs:isDefinedBy ; rdfs:label "entity"@en . a owl:Class; rdfs:subClassOf , _:42b750, _:42b760, _:42b770; "continuant"; "Continuant"; "An entity that exists in full at any time in which it exists at all, persists through time while maintaining its identity and has no temporal parts."@en; "BFO 2 Reference: Continuant entities are entities which can be sliced to yield parts only along the spatial dimension, yielding for example the parts of your table which we call its legs, its top, its nails. ‘My desk stretches from the window to the door. It has spatial parts, and can be sliced (in space) in two. With respect to time, however, a thing is a continuant.’ [60, p. 240"@en, "Continuant doesn't have a closure axiom because the subclasses don't necessarily exhaust all possibilites. For example, in an expansion involving bringing in some of Ceuster's other portions of reality, questions are raised as to whether universals are continuants"@en; , ; "A continuant is an entity that persists, endures, or continues to exist through time while maintaining its identity. (axiom label in BFO2 Reference: [008-002])"@en; "if b is a continuant and if, for some t, c has_continuant_part b at t, then c is a continuant. (axiom label in BFO2 Reference: [126-001])"@en, "if b is a continuant and if, for some t, cis continuant_part of b at t, then c is a continuant. (axiom label in BFO2 Reference: [009-002])"@en, "if b is a material entity, then there is some temporal interval (referred to below as a one-dimensional temporal region) during which b exists. (axiom label in BFO2 Reference: [011-002])"@en; "(forall (x y) (if (and (Continuant x) (exists (t) (continuantPartOfAt y x t))) (Continuant y))) // axiom label in BFO2 CLIF: [009-002] ", "(forall (x y) (if (and (Continuant x) (exists (t) (hasContinuantPartOfAt y x t))) (Continuant y))) // axiom label in BFO2 CLIF: [126-001] ", "(forall (x) (if (Continuant x) (Entity x))) // axiom label in BFO2 CLIF: [008-002] ", "(forall (x) (if (Material Entity x) (exists (t) (and (TemporalRegion t) (existsAt x t))))) // axiom label in BFO2 CLIF: [011-002] "; rdfs:isDefinedBy ; rdfs:label "continuant"@en . _:42b750 a owl:Restriction; owl:onProperty ; owl:allValuesFrom . _:42b760 a owl:Restriction; owl:onProperty ; owl:allValuesFrom . _:42b770 a owl:Restriction; owl:onProperty ; owl:allValuesFrom . a owl:Class; rdfs:subClassOf , _:42b780, _:42b790; "occurrent"; "Occurrent"; "An entity that has temporal parts and that happens, unfolds or develops through time."@en; "BFO 2 Reference: every occurrent that is not a temporal or spatiotemporal region is s-dependent on some independent continuant that is not a spatial region"@en, "BFO 2 Reference: s-dependence obtains between every process and its participants in the sense that, as a matter of necessity, this process could not have existed unless these or those participants existed also. A process may have a succession of participants at different phases of its unfolding. Thus there may be different players on the field at different times during the course of a football game; but the process which is the entire game s-depends_on all of these players nonetheless. Some temporal parts of this process will s-depend_on on only some of the players."@en, "Occurrent doesn't have a closure axiom because the subclasses don't necessarily exhaust all possibilites. An example would be the sum of a process and the process boundary of another process."@en, "Simons uses different terminology for relations of occurrents to regions: Denote the spatio-temporal location of a given occurrent e by 'spn[e]' and call this region its span. We may say an occurrent is at its span, in any larger region, and covers any smaller region. Now suppose we have fixed a frame of reference so that we can speak not merely of spatio-temporal but also of spatial regions (places) and temporal regions (times). The spread of an occurrent, (relative to a frame of reference) is the space it exactly occupies, and its spell is likewise the time it exactly occupies. We write 'spr[e]' and `spl[e]' respectively for the spread and spell of e, omitting mention of the frame."; , ; "An occurrent is an entity that unfolds itself in time or it is the instantaneous boundary of such an entity (for example a beginning or an ending) or it is a temporal or spatiotemporal region which such an entity occupies_temporal_region or occupies_spatiotemporal_region. (axiom label in BFO2 Reference: [077-002])"@en; "Every occurrent occupies_spatiotemporal_region some spatiotemporal region. (axiom label in BFO2 Reference: [108-001])"@en, "b is an occurrent entity iff b is an entity that has temporal parts. (axiom label in BFO2 Reference: [079-001])"@en; "(forall (x) (if (Occurrent x) (exists (r) (and (SpatioTemporalRegion r) (occupiesSpatioTemporalRegion x r))))) // axiom label in BFO2 CLIF: [108-001] ", "(forall (x) (iff (Occurrent x) (and (Entity x) (exists (y) (temporalPartOf y x))))) // axiom label in BFO2 CLIF: [079-001] "; rdfs:isDefinedBy ; rdfs:label "occurrent"@en . _:42b780 a owl:Restriction; owl:onProperty ; owl:allValuesFrom . _:42b790 a owl:Restriction; owl:onProperty ; owl:allValuesFrom . a owl:Class; rdfs:subClassOf , _:42b7a0; "ic"; "IndependentContinuant"; "a chair"@en, "a heart"@en, "a leg"@en, "a molecule"@en, "a spatial region"@en, "an atom"@en, "an orchestra."@en, "an organism"@en, "the bottom right portion of a human torso"@en, "the interior of your mouth"@en; "A continuant that is a bearer of quality and realizable entity entities, in which other entities inhere and which itself cannot inhere in anything."@en, "b is an independent continuant = Def. b is a continuant which is such that there is no c and no t such that b s-depends_on c at t. (axiom label in BFO2 Reference: [017-002])"@en; , ; "For any independent continuant b and any time t there is some spatial region r such that b is located_in r at t. (axiom label in BFO2 Reference: [134-001])"@en, "For every independent continuant b and time t during the region of time spanned by its life, there are entities which s-depends_on b during t. (axiom label in BFO2 Reference: [018-002])"@en; "(forall (x t) (if (IndependentContinuant x) (exists (r) (and (SpatialRegion r) (locatedInAt x r t))))) // axiom label in BFO2 CLIF: [134-001] ", "(forall (x t) (if (and (IndependentContinuant x) (existsAt x t)) (exists (y) (and (Entity y) (specificallyDependsOnAt y x t))))) // axiom label in BFO2 CLIF: [018-002] ", "(iff (IndependentContinuant a) (and (Continuant a) (not (exists (b t) (specificallyDependsOnAt a b t))))) // axiom label in BFO2 CLIF: [017-002] "; rdfs:comment "A continuant that is a bearer of quality and realizable entity entities, in which other entities inhere and which itself cannot inhere in anything."@en; rdfs:isDefinedBy ; rdfs:label "independent continuant"@en . _:42b7a0 a owl:Restriction; owl:onProperty ; owl:allValuesFrom . a owl:Class; rdfs:subClassOf ; ; rdfs:label "spatial region"@en . a owl:Class; rdfs:subClassOf , _:42b7b0; "process"; "Process"; "a process of cell-division, \\ a beating of the heart"@en, "a process of meiosis"@en, "a process of sleeping"@en, "the course of a disease"@en, "the flight of a bird"@en, "the life of an organism"@en, "your process of aging."@en; "An occurrent that has temporal proper parts and for some time t, p s-depends_on some material entity at t."@en, "p is a process = Def. p is an occurrent that has temporal proper parts and for some time t, p s-depends_on some material entity at t. (axiom label in BFO2 Reference: [083-003])"@en; "BFO 2 Reference: The realm of occurrents is less pervasively marked by the presence of natural units than is the case in the realm of independent continuants. Thus there is here no counterpart of ‘object’. In BFO 1.0 ‘process’ served as such a counterpart. In BFO 2.0 ‘process’ is, rather, the occurrent counterpart of ‘material entity’. Those natural – as contrasted with engineered, which here means: deliberately executed – units which do exist in the realm of occurrents are typically either parasitic on the existence of natural units on the continuant side, or they are fiat in nature. Thus we can count lives; we can count football games; we can count chemical reactions performed in experiments or in chemical manufacturing. We cannot count the processes taking place, for instance, in an episode of insect mating behavior.Even where natural units are identifiable, for example cycles in a cyclical process such as the beating of a heart or an organism’s sleep/wake cycle, the processes in question form a sequence with no discontinuities (temporal gaps) of the sort that we find for instance where billiard balls or zebrafish or planets are separated by clear spatial gaps. Lives of organisms are process units, but they too unfold in a continuous series from other, prior processes such as fertilization, and they unfold in turn in continuous series of post-life processes such as post-mortem decay. Clear examples of boundaries of processes are almost always of the fiat sort (midnight, a time of death as declared in an operating theater or on a death certificate, the initiation of a state of war)"@en; , ; "(iff (Process a) (and (Occurrent a) (exists (b) (properTemporalPartOf b a)) (exists (c t) (and (MaterialEntity c) (specificallyDependsOnAt a c t))))) // axiom label in BFO2 CLIF: [083-003] "; rdfs:comment "An occurrent that has temporal proper parts and for some time t, p s-depends_on some material entity at t."@en; rdfs:isDefinedBy ; rdfs:label "process"@en . _:42b7b0 a owl:Restriction; owl:onProperty ; owl:allValuesFrom . a owl:Class; rdfs:subClassOf ; "disposition"; "Disposition"; "an atom of element X has the disposition to decay to an atom of element Y"@en, "certain people have a predisposition to colon cancer"@en, "children are innately disposed to categorize objects in certain ways."@en, "the cell wall is disposed to filter chemicals in endocytosis and exocytosis"@en; "BFO 2 Reference: Dispositions exist along a strength continuum. Weaker forms of disposition are realized in only a fraction of triggering cases. These forms occur in a significant number of cases of a similar type."@en; , ; "b is a disposition means: b is a realizable entity & b’s bearer is some material entity & b is such that if it ceases to exist, then its bearer is physically changed, & b’s realization occurs when and because this bearer is in some special physical circumstances, & this realization occurs in virtue of the bearer’s physical make-up. (axiom label in BFO2 Reference: [062-002])"@en; "If b is a realizable entity then for all t at which b exists, b s-depends_on some material entity at t. (axiom label in BFO2 Reference: [063-002])"@en; "(forall (x t) (if (and (RealizableEntity x) (existsAt x t)) (exists (y) (and (MaterialEntity y) (specificallyDepends x y t))))) // axiom label in BFO2 CLIF: [063-002] ", "(forall (x) (if (Disposition x) (and (RealizableEntity x) (exists (y) (and (MaterialEntity y) (bearerOfAt x y t)))))) // axiom label in BFO2 CLIF: [062-002] "; rdfs:isDefinedBy ; rdfs:label "disposition"@en . a owl:Class; rdfs:subClassOf , _:42b7c0; "realizable"; "RealizableEntity"; "the disposition of this piece of metal to conduct electricity."@en, "the disposition of your blood to coagulate"@en, "the function of your reproductive organs"@en, "the role of being a doctor"@en, "the role of this boundary to delineate where Utah and Colorado meet"@en; "A specifically dependent continuant that inheres in continuant entities and are not exhibited in full at every time in which it inheres in an entity or group of entities. The exhibition or actualization of a realizable entity is a particular manifestation, functioning or process that occurs under certain circumstances."@en; , ; "To say that b is a realizable entity is to say that b is a specifically dependent continuant that inheres in some independent continuant which is not a spatial region and is of a type instances of which are realized in processes of a correlated type. (axiom label in BFO2 Reference: [058-002])"@en; "All realizable dependent continuants have independent continuants that are not spatial regions as their bearers. (axiom label in BFO2 Reference: [060-002])"@en; "(forall (x t) (if (RealizableEntity x) (exists (y) (and (IndependentContinuant y) (not (SpatialRegion y)) (bearerOfAt y x t))))) // axiom label in BFO2 CLIF: [060-002] ", "(forall (x) (if (RealizableEntity x) (and (SpecificallyDependentContinuant x) (exists (y) (and (IndependentContinuant y) (not (SpatialRegion y)) (inheresIn x y)))))) // axiom label in BFO2 CLIF: [058-002] "; rdfs:isDefinedBy ; rdfs:label "realizable entity"@en . _:42b7c0 a owl:Restriction; owl:onProperty ; owl:allValuesFrom . a owl:Class; rdfs:subClassOf , _:42b7d0; "quality"; "Quality"; "the ambient temperature of this portion of air"@en, "the color of a tomato"@en, "the length of the circumference of your waist"@en, "the mass of this piece of gold."@en, "the shape of your nose"@en, "the shape of your nostril"@en; , ; "a quality is a specifically dependent continuant that, in contrast to roles and dispositions, does not require any further process in order to be realized. (axiom label in BFO2 Reference: [055-001])"@en; "If an entity is a quality at any time that it exists, then it is a quality at every time that it exists. (axiom label in BFO2 Reference: [105-001])"@en; "(forall (x) (if (Quality x) (SpecificallyDependentContinuant x))) // axiom label in BFO2 CLIF: [055-001] ", "(forall (x) (if (exists (t) (and (existsAt x t) (Quality x))) (forall (t_1) (if (existsAt x t_1) (Quality x))))) // axiom label in BFO2 CLIF: [105-001] "; rdfs:isDefinedBy ; rdfs:label "quality"@en . _:42b7d0 a owl:Restriction; owl:onProperty ; owl:allValuesFrom . a owl:Class; rdfs:subClassOf , _:42b7e0; "sdc"; "SpecificallyDependentContinuant"; "Reciprocal specifically dependent continuants: the function of this key to open this lock and the mutually dependent disposition of this lock: to be opened by this key"@en, "of one-sided specifically dependent continuants: the mass of this tomato"@en, "of relational dependent continuants (multiple bearers): John’s love for Mary, the ownership relation between John and this statue, the relation of authority between John and his subordinates."@en, "the disposition of this fish to decay"@en, "the function of this heart: to pump blood"@en, "the mutual dependence of proton donors and acceptors in chemical reactions [79"@en, "the mutual dependence of the role predator and the role prey as played by two organisms in a given interaction"@en, "the pink color of a medium rare piece of grilled filet mignon at its center"@en, "the role of being a doctor"@en, "the shape of this hole."@en, "the smell of this portion of mozzarella"@en; "A continuant that inheres in or is borne by other entities. Every instance of A requires some specific instance of B which must always be the same."@en, "b is a relational specifically dependent continuant = Def. b is a specifically dependent continuant and there are n > 1 independent continuants c1, … cn which are not spatial regions are such that for all 1 i < j n, ci and cj share no common parts, are such that for each 1 i n, b s-depends_on ci at every time t during the course of b’s existence (axiom label in BFO2 Reference: [131-004])"@en, "b is a specifically dependent continuant = Def. b is a continuant & there is some independent continuant c which is not a spatial region and which is such that b s-depends_on c at every time t during the course of b’s existence. (axiom label in BFO2 Reference: [050-003])"@en; "Specifically dependent continuant doesn't have a closure axiom because the subclasses don't necessarily exhaust all possibilites. We're not sure what else will develop here, but for example there are questions such as what are promises, obligation, etc."@en; , ; "(iff (RelationalSpecificallyDependentContinuant a) (and (SpecificallyDependentContinuant a) (forall (t) (exists (b c) (and (not (SpatialRegion b)) (not (SpatialRegion c)) (not (= b c)) (not (exists (d) (and (continuantPartOfAt d b t) (continuantPartOfAt d c t)))) (specificallyDependsOnAt a b t) (specificallyDependsOnAt a c t)))))) // axiom label in BFO2 CLIF: [131-004] ", "(iff (SpecificallyDependentContinuant a) (and (Continuant a) (forall (t) (if (existsAt a t) (exists (b) (and (IndependentContinuant b) (not (SpatialRegion b)) (specificallyDependsOnAt a b t))))))) // axiom label in BFO2 CLIF: [050-003] "; rdfs:comment "A continuant that inheres in or is borne by other entities. Every instance of A requires some specific instance of B which must always be the same."@en; rdfs:isDefinedBy ; rdfs:label "specifically dependent continuant"@en . _:42b7e0 a owl:Restriction; owl:onProperty ; owl:allValuesFrom . a owl:Class; rdfs:subClassOf ; "role"; "Role"; "John’s role of husband to Mary is dependent on Mary’s role of wife to John, and both are dependent on the object aggregate comprising John and Mary as member parts joined together through the relational quality of being married."@en, "the priest role"@en, "the role of a boundary to demarcate two neighboring administrative territories"@en, "the role of a building in serving as a military target"@en, "the role of a stone in marking a property boundary"@en, "the role of subject in a clinical trial"@en, "the student role"@en; "A realizable entity the manifestation of which brings about some result or end that is not essential to a continuant in virtue of the kind of thing that it is but that can be served or participated in by that kind of continuant in some kinds of natural, social or institutional contexts."@en; "BFO 2 Reference: One major family of examples of non-rigid universals involves roles, and ontologies developed for corresponding administrative purposes may consist entirely of representatives of entities of this sort. Thus ‘professor’, defined as follows,b instance_of professor at t =Def. there is some c, c instance_of professor role & c inheres_in b at t.denotes a non-rigid universal and so also do ‘nurse’, ‘student’, ‘colonel’, ‘taxpayer’, and so forth. (These terms are all, in the jargon of philosophy, phase sortals.) By using role terms in definitions, we can create a BFO conformant treatment of such entities drawing on the fact that, while an instance of professor may be simultaneously an instance of trade union member, no instance of the type professor role is also (at any time) an instance of the type trade union member role (any more than any instance of the type color is at any time an instance of the type length).If an ontology of employment positions should be defined in terms of roles following the above pattern, this enables the ontology to do justice to the fact that individuals instantiate the corresponding universals – professor, sergeant, nurse – only during certain phases in their lives."@en; , ; "b is a role means: b is a realizable entity & b exists because there is some single bearer that is in some special physical, social, or institutional set of circumstances in which this bearer does not have to be& b is not such that, if it ceases to exist, then the physical make-up of the bearer is thereby changed. (axiom label in BFO2 Reference: [061-001])"@en; "(forall (x) (if (Role x) (RealizableEntity x))) // axiom label in BFO2 CLIF: [061-001] "; rdfs:isDefinedBy ; rdfs:label "role"@en . a owl:Class; rdfs:subClassOf , _:42b7f0; "gdc"; "GenericallyDependentContinuant"; "The entries in your database are patterns instantiated as quality instances in your hard drive. The database itself is an aggregate of such patterns. When you create the database you create a particular instance of the generically dependent continuant type database. Each entry in the database is an instance of the generically dependent continuant type IAO: information content entity."@en, "the pdf file on your laptop, the pdf file that is a copy thereof on my laptop"@en, "the sequence of this protein molecule; the sequence that is a copy thereof in that protein molecule."@en; "A continuant that is dependent on one or other independent continuant bearers. For every instance of A requires some instance of (an independent continuant type) B but which instance of B serves can change from time to time."@en, "b is a generically dependent continuant = Def. b is a continuant that g-depends_on one or more other entities. (axiom label in BFO2 Reference: [074-001])"@en; , ; "(iff (GenericallyDependentContinuant a) (and (Continuant a) (exists (b t) (genericallyDependsOnAt a b t)))) // axiom label in BFO2 CLIF: [074-001] "; rdfs:comment "A continuant that is dependent on one or other independent continuant bearers. For every instance of A requires some instance of (an independent continuant type) B but which instance of B serves can change from time to time."@en; rdfs:isDefinedBy ; rdfs:label "generically dependent continuant"@en . _:42b7f0 a owl:Restriction; owl:onProperty ; owl:allValuesFrom . a owl:Class; rdfs:subClassOf ; "function"; "Function"; "the function of a hammer to drive in nails"@en, "the function of a heart pacemaker to regulate the beating of a heart through electricity"@en, "the function of amylase in saliva to break down starch into sugar"@en; "BFO 2 Reference: In the past, we have distinguished two varieties of function, artifactual function and biological function. These are not asserted subtypes of BFO:function however, since the same function – for example: to pump, to transport – can exist both in artifacts and in biological entities. The asserted subtypes of function that would be needed in order to yield a separate monoheirarchy are not artifactual function, biological function, etc., but rather transporting function, pumping function, etc."@en; ; "A function is a disposition that exists in virtue of the bearer’s physical make-up and this physical make-up is something the bearer possesses because it came into being, either through evolution (in the case of natural biological entities) or through intentional design (in the case of artifacts), in order to realize processes of a certain sort. (axiom label in BFO2 Reference: [064-001])"@en; "(forall (x) (if (Function x) (Disposition x))) // axiom label in BFO2 CLIF: [064-001] "; rdfs:isDefinedBy ; rdfs:label "function"@en . a owl:Class; rdfs:subClassOf ; "p-boundary"; "ProcessBoundary"; "the boundary between the 2nd and 3rd year of your life."@en; "p is a process boundary =Def. p is a temporal part of a process & p has no proper temporal parts. (axiom label in BFO2 Reference: [084-001])"@en; ; "Every process boundary occupies_temporal_region a zero-dimensional temporal region. (axiom label in BFO2 Reference: [085-002])"@en; "(forall (x) (if (ProcessBoundary x) (exists (y) (and (ZeroDimensionalTemporalRegion y) (occupiesTemporalRegion x y))))) // axiom label in BFO2 CLIF: [085-002] ", "(iff (ProcessBoundary a) (exists (p) (and (Process p) (temporalPartOf a p) (not (exists (b) (properTemporalPartOf b a)))))) // axiom label in BFO2 CLIF: [084-001] "; rdfs:isDefinedBy ; rdfs:label "process boundary"@en . a owl:Class; rdfs:subClassOf ; "material"; "MaterialEntity"; "a flame"@en, "a forest fire"@en, "a human being"@en, "a hurricane"@en, "a photon"@en, "a puff of smoke"@en, "a sea wave"@en, "a tornado"@en, "an aggregate of human beings."@en, "an energy wave"@en, "an epidemic"@en, "the undetached arm of a human being"@en; "An independent continuant that is spatially extended whose identity is independent of that of other entities and can be maintained through time."@en; "BFO 2 Reference: Material entities (continuants) can preserve their identity even while gaining and losing material parts. Continuants are contrasted with occurrents, which unfold themselves in successive temporal parts or phases [60"@en, "BFO 2 Reference: Object, Fiat Object Part and Object Aggregate are not intended to be exhaustive of Material Entity. Users are invited to propose new subcategories of Material Entity."@en, "BFO 2 Reference: ‘Matter’ is intended to encompass both mass and energy (we will address the ontological treatment of portions of energy in a later version of BFO). A portion of matter is anything that includes elementary particles among its proper or improper parts: quarks and leptons, including electrons, as the smallest particles thus far discovered; baryons (including protons and neutrons) at a higher level of granularity; atoms and molecules at still higher levels, forming the cells, organs, organisms and other material entities studied by biologists, the portions of rock studied by geologists, the fossils studied by paleontologists, and so on.Material entities are three-dimensional entities (entities extended in three spatial dimensions), as contrasted with the processes in which they participate, which are four-dimensional entities (entities extended also along the dimension of time).According to the FMA, material entities may have immaterial entities as parts – including the entities identified below as sites; for example the interior (or ‘lumen’) of your small intestine is a part of your body. BFO 2.0 embodies a decision to follow the FMA here."@en, "Elucidation: An independent continuant that is spatially extended whose identity is independent of that of other entities and can be maintained through time."@en; , , , ; "A material entity is an independent continuant that has some portion of matter as proper or improper continuant part. (axiom label in BFO2 Reference: [019-002])"@en; "Every entity which has a material entity as continuant part is a material entity. (axiom label in BFO2 Reference: [020-002])"@en, "every entity of which a material entity is continuant part is also a material entity. (axiom label in BFO2 Reference: [021-002])"@en; "(forall (x) (if (MaterialEntity x) (IndependentContinuant x))) // axiom label in BFO2 CLIF: [019-002] ", "(forall (x) (if (and (Entity x) (exists (y t) (and (MaterialEntity y) (continuantPartOfAt x y t)))) (MaterialEntity x))) // axiom label in BFO2 CLIF: [021-002] ", "(forall (x) (if (and (Entity x) (exists (y t) (and (MaterialEntity y) (continuantPartOfAt y x t)))) (MaterialEntity x))) // axiom label in BFO2 CLIF: [020-002] "; rdfs:isDefinedBy ; rdfs:label "material entity"@en . a owl:Class; rdfs:subClassOf ; ; rdfs:label "immaterial entity"@en . a owl:Class; rdfs:subClassOf ; "peptide"; "Amide derived from two or more amino carboxylic acid molecules (the same or different) by formation of a covalent bond from the carbonyl carbon of one to the nitrogen atom of another with formal loss of water. The term is usually applied to structures formed from alpha-amino acids, but it includes those derived from any amino carboxylic acid. X = OH, OR, NH2, NHR, etc."; , ; rdfs:label "peptide" . a owl:Class; rdfs:subClassOf ; "deoxyribonucleic acid"; "High molecular weight, linear polymers, composed of nucleotides containing deoxyribose and linked by phosphodiester bonds; DNA contain the genetic information of organisms."; , ; rdfs:label "deoxyribonucleic acid" . a owl:Class; rdfs:subClassOf ; "molecular entity"; "Any constitutionally or isotopically distinct atom, molecule, ion, ion pair, radical, radical ion, complex, conformer etc., identifiable as a separately distinguishable entity."; "We are assuming that every molecular entity has to be completely connected by chemical bonds. This excludes protein complexes, which are comprised of minimally two separate molecular entities. We will follow up with Chebi to ensure this is their understanding as well"@en; , ; rdfs:label "molecular entity" . a owl:Class; rdfs:subClassOf ; "An aliphatic monocarboxylic acid with a chain length of less than C6. If any non-hydrocarbon substituent is present, the compound is not normally regarded as a short-chain fatty acid."; "SCFA", "SCFAs", "short-chain fatty acids"; "pubmed:16633129; pubmed:16870803; pubmed:20148677; pubmed:18203540"; rdfs:label "short-chain fatty acid"@en . a owl:Class; rdfs:subClassOf ; "atom"; "A chemical entity constituting the smallest component of an element having the chemical properties of the element."; , ; rdfs:label "atom" . a owl:Class; rdfs:subClassOf ; "nucleic acid"; "A macromolecule made up of nucleotide units and hydrolysable into certain pyrimidine or purine bases (usually adenine, cytosine, guanine, thymine, uracil), D-ribose or 2-deoxy-D-ribose and phosphoric acid."; , ; rdfs:label "nucleic acid" . a owl:Class; rdfs:subClassOf ; "ribonucleic acid"; "High molecular weight, linear polymers, composed of nucleotides containing ribose and linked by phosphodiester bonds; RNA is central to the synthesis of proteins."; , ; rdfs:label "ribonucleic acid" . a owl:Class; rdfs:subClassOf ; "macromolecule"; "A macromolecule is a molecule of high relative molecular mass, the structure of which essentially comprises the multiple repetition of units derived, actually or conceptually, from molecules of low relative molecular mass."; "polymer"@en; , ; rdfs:label "macromolecule" . a owl:Class; rdfs:subClassOf ; "cell"; "PMID:18089833.Cancer Res. 2007 Dec 15;67(24):12018-25. \"...Epithelial cells were harvested from histologically confirmed adenocarcinomas ..\""@en; "A material entity of anatomical origin (part of or deriving from an organism) that has as its parts a maximally connected cell compartment surrounded by a plasma membrane."; , ; rdfs:label "cell" . a owl:Class; rdfs:subClassOf , _:42b800; "cultured cell"; "A cell in vitro that is or has been maintained or propagated as part of a cell culture."; , ; rdfs:label "cultured cell" . _:42b800 a owl:Class; owl:unionOf _:42b820 . _:42b820 rdf:first _:42b810; rdf:rest _:42b840 . _:42b810 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:42b840 rdf:first _:42b830; rdf:rest rdf:nil . _:42b830 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:42b850 . _:42b850 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , , _:42b860; "experimentally modified cell in vitro"; "A cell in vitro that has undergone physical changes as a consequence of a deliberate and specific experimental procedure."; , ; rdfs:label "experimentally modified cell in vitro" . _:42b860 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf ; "A quantitative or qualitative value which is the result of an act of assessing a morphological or physiological state or property in a single individual or sample or a group of individuals or samples, based on direct observation or experimental manipulation."; ; "Clinical_Measurement.ontology"; "CMO:0000000"; rdfs:label "clinical measurement" . a owl:Class; rdfs:subClassOf ; "Any measurement related to immunoglobulin, any of several classes of proteins produced by plasma cells and lymphocytes which play essential roles in the immune system, for example, attaching to foreign substances in an effort to destroy them, in serum, the clear liquid that separates from blood after it has clotted completely, i.e. blood plasma from which fibrinogen has been removed."; ; "JSmith"; "2013-01-08T18:17:44Z"; "Clinical_Measurement.ontology"; "CMO:0001276"; rdfs:label "serum immunoglobulin measurement" . a owl:Class; rdfs:subClassOf ; "Any measurement related to immunoglobulins, any of several classes of proteins produced by plasma cells and lymphocytes which play essential roles in the immune system, for example, attaching to foreign substances in an effort to destroy them, in blood, the fluid that circulates through the heart, arteries, capillaries and veins carrying nutrients and oxygen to the body tissues and metabolites away from them."; ; "JSmith"; "2013-01-30T12:00:54Z"; "Clinical_Measurement.ontology"; "CMO:0001531"; rdfs:label "blood immunoglobulin measurement" . a owl:Class; rdfs:subClassOf ; "The amount in a specified sample of serum of one or more types of immunoglobulin A (IgA), one of the most prevalent of the five classes of antibodies produced by the body. IgA is found in all secretions of the body and is the major antibody in the tears, saliva, and mucous membranes lining the intestines and bronchi, constituting an important factor in mucosal immunity."; ; "JSmith"; "2014-01-27T12:21:14Z"; "serum IgA level"; "Clinical_Measurement.ontology"; "CMO:0002095"; rdfs:label "serum immunoglobulin A level" . a owl:Class; rdfs:subClassOf ; "The amount in a specified sample of serum of one or more types of immunoglobulin G (IgG), the most abundant class of antibodies found in blood serum and lymph. IgG antibodies are active against bacteria, fungi, viruses, and foreign particles, and trigger action of the complement system."; ; "JSmith"; "2014-01-27T12:33:22Z"; "serum IgG level"; "Clinical_Measurement.ontology"; "CMO:0002102"; rdfs:label "serum immunoglobulin G level" . a owl:Class; rdfs:subClassOf ; "The amount in a specified sample of serum of one or more types of immunoglobulin M (IgM), one of the five classes of antibodies produced by the body. IgM is found in circulating body fluids and is the first class of antibodies to appear in response to an initial exposure to an antigen."; ; "JSmith"; "2014-01-27T12:35:25Z"; "serum IgM level"; "Clinical_Measurement.ontology"; "CMO:0002104"; rdfs:label "serum immunoglobulin M level" . a owl:Class; rdfs:subClassOf ; "A material entity that is a maximal functionally integrated unit that develops from a program encoded in a genome"@en; "'Maximal functionally integrated unit' is intended to express unity, which Barry considers synonymous with BFO 'object'."@en, "Includes virus - we will later have a class for cellular organisms."@en; ; rdfs:label "organism"@en . a owl:Class; rdfs:subClassOf ; "An intestinal disease characterized by inflammation located_in all parts of digestive tract."; ; "EFO:0003767", "KEGG:05321", "MESH:D015212", "NCI:C3138", "OMIM:PS266600", "SNOMEDCT_US_2018_03_01:24526004", "UMLS_CUI:C0021390"; "disease_ontology"; "DOID:0050589"; , ; rdfs:comment """Xref MGI. OMIM mapping confirmed by DO. [SN]."""; rdfs:label "inflammatory bowel disease" . a owl:Class; rdfs:subClassOf ; "A cancer that is classified based on the organ it starts in."; ; "snadendla"; "2011-06-13T03:28:33Z"; "MESH:D009371"; "disease_ontology"; "DOID:0050686"; rdfs:label "organ system cancer" . a owl:Class; rdfs:subClassOf , ; "An autoimmune hypersensitivity disease that is the abnormal functioning of the immune system that causes your immune system to produce antibodies or T cells against cells and/or tissues in the musculoskeletal system."; ; "disease_ontology"; "DOID:0060032"; rdfs:label "autoimmune disease of musculoskeletal system" . a owl:Class; rdfs:subClassOf ; "A gastrointestinal system cancer that is located_in the hepatobiliary system"; ; "disease_ontology"; "DOID:0080355"; rdfs:label "hepatobiliary system cancer"@en . a owl:Class; rdfs:subClassOf , ; "A gastrointestinal system cancer that is located_in the intestine."; ; "ICD10CM:C26.0", "ICD9CM:159.0", "MESH:D007414", "NCI2004_11_17:C4572", "NCI:C4572", "SNOMEDCT_US_2018_03_01:93838000", "UMLS_CUI:C0346627"; "malignant intestinal tumors", "malignant neoplasm of intestine"; "disease_ontology"; "DOID:10155"; , ; rdfs:label "intestinal cancer" . a owl:Class; rdfs:subClassOf ; "A gastrointestinal system cancer that is located_in the stomach."; ; "DOID:10539", "DOID:10542", "DOID:10543", "DOID:4713"; "GARD:7704", "ICD10CM:C16", "ICD10CM:C16.2", "ICD10CM:C16.5", "ICD10CM:C16.6", "ICD10CM:C16.9", "ICD9CM:151", "ICD9CM:151.4", "ICD9CM:151.5", "ICD9CM:151.6", "ICD9CM:151.9", "MESH:D013274", "NCI:C3387", "NCI:C9331", "OMIM:137215", "OMIM:613659", "SNOMEDCT_US_2018_03_01:93717002", "SNOMEDCT_US_2018_03_01:93818001", "SNOMEDCT_US_2018_03_01:93867004", "SNOMEDCT_US_2018_03_01:94074003", "UMLS_CUI:C0024623", "UMLS_CUI:C0038356", "UMLS_CUI:C0153421", "UMLS_CUI:C0153422", "UMLS_CUI:C0153423"; "Ca body - stomach", "Ca lesser curvature - stomach", "ca greater curvature of stomach", "gastric cancer", "gastric neoplasm", "malignant neoplasm of body of stomach", "malignant neoplasm of lesser curve of stomach", "malignant tumor of body of stomach", "malignant tumor of greater curve of stomach", "malignant tumor of lesser curve of stomach"; "disease_ontology"; "DOID:10534"; , , , ; rdfs:comment "OMIM mapping confirmed by DO. [SN]."; rdfs:label "stomach cancer" . a owl:Class; rdfs:subClassOf ; "An arthritis that has_material_basis_in uric acid crystal deposits located_in joint."; ; "DOID:14144"; "EFO:0004274", "ICD10CM:M10", "ICD10CM:M10.9", "ICD9CM:274", "ICD9CM:274.0", "ICD9CM:274.00", "ICD9CM:274.9", "MESH:D006073", "MESH:D015210", "NCI:C34650", "SNOMEDCT_US_2018_03_01:48440001", "SNOMEDCT_US_2018_03_01:90560007", "UMLS_CUI:C0003868", "UMLS_CUI:C0018099"; "Articular gout", "Gouty arthropathy", "gouty arthritis"; "disease_ontology"; "DOID:13189"; ; rdfs:label "gout" . a owl:Class; rdfs:subClassOf ; "A gastrointestinal system disease described as the condition of having frequent loose or liquid bowel movements. Acute diarrhea is a common cause of death in developing countries and the second most common cause of infant deaths worldwide. The loss of fluids through diarrhea can cause severe dehydration which is one cause of death in diarrhea sufferers. Along with water, sufferers also lose dangerous amounts of important salts, electrolytes, and other nutrients. There are at least four types of diarrhea: secretory diarrhea, osmotic diarrhea, motility-related diarrhea, and inflammatory diarrhea."; ; "DOID:0050006"; "ICD9CM:009.2", "MESH:D003967", "SNOMEDCT_US_2018_03_01:19213003", "UMLS_CUI:C0013369"; "disease_ontology"; "diarrhea of presumed infectious origin", "diarrhoea"; "DOID:13250"; ; rdfs:label "diarrhea" . a owl:Class; rdfs:subClassOf , ; "An autoimmune hypersensitivity disease that involves inflammation or pain in the muscles, joints, or fibrous tissue."; ; "disease_ontology"; "DOID:1575"; rdfs:label "rheumatic disease" . a owl:Class; rdfs:subClassOf ; "A disease of cellular proliferation that is malignant and primary, characterized by uncontrolled cellular proliferation, local cell invasion and metastasis."; ; "ICD10CM:C80", "ICD10CM:C80.1", "ICD9CM:199", "MESH:D009369", "NCI:C9305", "SNOMEDCT_US_2018_03_01:38807002", "UMLS_CUI:C0006826", "stedman:rlc"; "malignant neoplasm", "malignant tumor", "primary cancer"; "disease_ontology"; "DOID:162"; , , ; rdfs:comment "Updating out dated UMLS CUI."; rdfs:label "cancer" . a owl:Class; rdfs:subClassOf ; "A disease of anatomical entity that occurs in the muscular and/or skeletal system."; ; "MESH:D009140", "NCI:C107377", "SNOMEDCT_US_2018_03_01:928000", "UMLS_CUI:C0026857"; "disease_ontology"; "DOID:17"; , , ; rdfs:label "musculoskeletal system disease" . a owl:Class; rdfs:subClassOf , ; "An organ system cancer located_in endocrine system that is characterized by uncontrolled cellular proliferation of the hormone producing glands of the endocrine system."; ; "DOID:10009"; "CSP2005:2009-5861", "ICD10CM:C75.9", "ICD9CM:194.9", "MESH:D004701", "NCI2004_11_17:C3010", "NCI2004_11_17:C3575", "NCI:C3010", "NCI:C3575", "SNOMEDCT_US_2018_03_01:93780007", "UMLS_CUI:C0014132", "UMLS_CUI:C0153658"; "Endocrine tumor", "endocrine neoplasm", "malignant Endocrine tumor", "malignant neoplasm of endocrine gland", "malignant tumour of endocrine gland", "neoplasm of endocrine gland", "neoplasm of endocrine system"; "disease_ontology"; "DOID:170"; , ; rdfs:label "endocrine gland cancer" . a owl:Class; rdfs:subClassOf ; "An endocrine gland cancer located_in the pancreas."; ; "DOID:14356", "DOID:1797", "DOID:3588", "DOID:9859"; "CSP2005:2014-4876", "GARD:9364", "ICD10CM:C25.0", "ICD10CM:C25.1", "ICD10CM:C25.2", "ICD9CM:157.0", "ICD9CM:157.1", "ICD9CM:157.2", "ICD9CM:157.8", "KEGG:05212", "MESH:D010190", "MTH:NOCODE", "NCI2004_11_17:C3305", "NCI:C3305", "ORDO:1333", "ORDO:217074", "SNOMEDCT_US_2018_03_01:93715005", "SNOMEDCT_US_2018_03_01:93823001", "SNOMEDCT_US_2018_03_01:94082003", "UMLS_CUI:C0030297", "UMLS_CUI:C0153458", "UMLS_CUI:C0153459", "UMLS_CUI:C0153460", "UMLS_CUI:C0153463"; "Ca body of pancreas", "Ca head of pancreas", "Ca tail of pancreas", "malignant neoplasm of body of pancreas", "malignant neoplasm of head of pancreas", "malignant neoplasm of tail of pancreas", "pancreas neoplasm", "pancreatic neoplasm", "pancreatic tumor"; "disease_ontology"; "DOID:1793"; , , ; rdfs:comment "Xref MGI."; rdfs:label "pancreatic cancer" . a owl:Class; rdfs:subClassOf ; "A large intestine cancer that is located_in the colon."; ; "ICD10CM:C18", "ICD10CM:C18.9", "ICD9CM:153", "ICD9CM:153.9", "MESH:D003110", "NCI:C9242", "SNOMEDCT_US_2018_03_01:93761005", "UMLS_CUI:C0007102"; "disease_ontology"; "DOID:219"; , , ; rdfs:label "colon cancer" . a owl:Class; rdfs:subClassOf ; "A disease of anatomical entity that is located_in endocrine glands which secretes a type of hormone directly into the bloodstream to regulate the body."; ; "ICD10CM:E34.9", "ICD9CM:259.9", "MESH:D004700", "NCI:C3009", "SNOMEDCT_US_2018_03_01:67432001", "UMLS_CUI:C0014130"; "disease_ontology"; "DOID:28"; , , ; rdfs:label "endocrine system disease" . a owl:Class; rdfs:subClassOf ; "A disease of anatomical entity that is located_in the immune system."; ; "EFO:0000540", "ICD10CM:D89.9", "ICD9CM:279", "ICD9CM:279.9", "UMLS_CUI:C0041806"; "disease_ontology"; "DOID:2914"; , , ; rdfs:label "immune system disease" . a owl:Class; rdfs:subClassOf ; "A cell type cancer that has_material_basis_in abnormally proliferating cells derives_from epithelial cells."; ; "DOID:2428", "DOID:6570"; "CSP2005:2000-5801", "MESH:D002277", "MESH:D009375", "NCI2004_11_17:C6927", "NCI:C2916", "NCI:C3709", "SNOMEDCT_US_2018_03_01:68453008", "SNOMEDCT_US_2018_03_01:71298006", "UMLS_CUI:C0007097", "UMLS_CUI:C0553707", "UMLS_CUI:C1368683"; "epithelioma", "malignant Epithelioma"; "disease_ontology"; "DOID:305"; , , ; rdfs:label "carcinoma" . a owl:Class; rdfs:subClassOf ; ; "DOID:11500", "DOID:6144"; "CSP2005:4004-0004", "EFO:0000341", "ICD10CM:J44.9", "MESH:D029424", "NCI2004_11_17:C3199", "NCI:C3199", "OMIM:606963", "SNOMEDCT_US_2018_03_01:13645005", "UMLS_CUI:C0024117"; "COLD", "COPD", "chronic obstructive airway disease", "chronic obstructive lung disease"; "disease_ontology"; "DOID:3083"; ; rdfs:label "chronic obstructive pulmonary disease" . a owl:Class; rdfs:subClassOf ; "A gastrointestinal system disease that is located_in the liver and/or biliary tract."; ; "NCI:C3959", "UMLS_CUI:C0267792"; "liver and biliary tract disease"; "disease_ontology"; "DOID:3118"; ; rdfs:label "hepatobiliary disease" . a owl:Class; rdfs:subClassOf , ; "An organ system cancer located_in gastrointestinal tract that is manifested in organs of the gastrointestinal system."; ; "DOID:4945", "DOID:8377"; "ICD10CM:C26.9", "ICD9CM:239.0", "MESH:D004067", "MESH:D005770", "NCI2004_11_17:C3052", "NCI2004_11_17:C4890", "NCI:C3052", "NCI:C4890", "SNOMEDCT_US_2018_03_01:93811007", "UMLS_CUI:C0012243", "UMLS_CUI:C0017185", "UMLS_CUI:C0685938"; "GI tumor", "digestive system cancer", "gastrointestinal tract cancer"; "disease_ontology"; "DOID:3119"; , , ; rdfs:label "gastrointestinal system cancer" . a owl:Class; rdfs:subClassOf ; "A bone disease that results_in inflammation of the located_in bone."; ; "CSP2005:2715-2703", "MESH:D010000", "SNOMEDCT_US_2018_03_01:44462005", "UMLS_CUI:C0029400"; "Inflammatory disorder of bone", "bone inflammatory disease", "osteitis"; "disease_ontology"; "DOID:3342"; rdfs:label "bone inflammation disease" . a owl:Class; rdfs:subClassOf , , ; "A hepatobiliary system cancer that is located_in the liver."; ; "DOID:12300", "DOID:269", "DOID:7330", "DOID:915", "DOID:919"; "CSP2005:2003-2810", "ICD10CM:C22.0", "ICD10CM:C22.9", "ICD9CM:155.0", "ICD9CM:155.2", "ICD9CM_2006:155.0", "ICD9CM_2006:155.2", "MESH:D008113", "NCI2004_11_17:C34803", "NCI2004_11_17:C7692", "NCI:C34803", "NCI:C7692", "SNOMEDCT_US_2018_03_01:93870000", "SNOMEDCT_US_2018_03_01:95214007", "UMLS_CUI:C0023903", "UMLS_CUI:C0024620", "UMLS_CUI:C0345904", "UMLS_CUI:C0854795"; "Ca liver - primary", "Resectable malignant neoplasm of Liver", "ca liver - primary", "hepatic cancer", "hepatic neoplasm", "malignant hepato-biliary neoplasm", "malignant neoplasm of liver", "malignant neoplasm of liver, not specified as primary or secondary", "malignant neoplasm of liver, primary", "malignant tumor of liver", "neoplasm of liver", "non-resectable primary hepatic malignant neoplasm", "primary liver cancer", "primary malignant neoplasm of Liver", "primary malignant neoplasm of liver", "resectable malignant neoplasm of the liver"; "disease_ontology"; "DOID:3571"; , ; rdfs:label "liver cancer" . a owl:Class; rdfs:subClassOf ; "A disease is a disposition (i) to undergo pathological processes that (ii) exists in an organism because of one or more disorders in that organism."; ; "MESH:D004194", "NCI:C2991", "SNOMEDCT_US_2018_03_01:64572001", "UMLS_CUI:C0012634"; "disease_ontology"; "DOID:4"; ; rdfs:label "disease" . a owl:Class; rdfs:subClassOf , ; ; "DOID:2164", "DOID:2165", "DOID:46"; "ICD10CM:K70-K77", "ICD10CM:K76.9", "ICD9CM:573.9", "MESH:D008107", "NCI2004_11_17:C3196", "NCI:C3196", "SNOMEDCT_US_2018_03_01:62857009", "UMLS_CUI:C0023895"; "disorder of liver", "hepatic disorder"; "disease_ontology"; "DOID:409"; ; rdfs:label "liver disease" . a owl:Class; rdfs:subClassOf ; "An immune system disease that is an overactive immune response of the body against substances and tissues normally present in the body resulting from an abnormal functioning of the immune system that results in the production of antibodies or T cell directed against the host tissues."; ; "ICD9CM:720", "OMIM:109100", "UMLS_CUI:C0003089", "ls:IEDB"; "autoimmune disease", "hypersensitivity reaction type II disease"; "disease_ontology"; "DOID:417"; rdfs:comment "Xref MGI."; rdfs:label "autoimmune hypersensitivity disease" . a owl:Class; rdfs:subClassOf , ; "A biliary tract cancer that is located_in the bile duct."; ; "DOID:10019"; "ICD10CM:C24.0", "ICD9CM:156.1", "MESH:D001650", "NCI2004_11_17:C2898", "NCI2004_11_17:C7483", "NCI:C2898", "NCI:C7483", "SNOMEDCT_US_2018_03_01:93790004", "UMLS_CUI:C0005396", "UMLS_CUI:C0153453"; "Ca extrahepatic bile ducts", "bile duct tumor", "malignant neoplasm of the extrahepatic bile duct"; "disease_ontology"; "DOID:4606"; , ; rdfs:label "bile duct cancer" . a owl:Class; rdfs:subClassOf ; "A gastrointestinal system cancer that is located_in the esophagus."; ; "DOID:10291", "DOID:10292", "DOID:10448", "DOID:1102", "DOID:1104"; "GARD:6383", "ICD10CM:C15.3", "ICD10CM:C15.4", "ICD10CM:C15.5", "ICD9CM:150.2", "ICD9CM:150.3", "ICD9CM:150.4", "ICD9CM:150.5", "ICD9CM:150.8", "MESH:D004938", "MTHICD9_2006:150.3", "MTHICD9_2006:150.5", "NCI2004_11_17:C3533", "NCI2004_11_17:C3534", "NCI2004_11_17:C3535", "NCI2004_11_17:C4764", "NCI:C3028", "NCI:C3533", "NCI:C3534", "NCI:C3535", "NCI:C4764", "OMIM:133239", "SNOMEDCT_US_2018_03_01:93656003", "SNOMEDCT_US_2018_03_01:93877002", "SNOMEDCT_US_2018_03_01:93895004", "SNOMEDCT_US_2018_03_01:94119000", "UMLS_CUI:C0014859", "UMLS_CUI:C0153413", "UMLS_CUI:C0153414", "UMLS_CUI:C0153415", "UMLS_CUI:C0153416", "UMLS_CUI:C0496775"; "Ca lower third oesophagus", "Ca middle third oesophagus", "esophagus cancer", "malignant neoplasm of distal third of esophagus", "malignant neoplasm of lower third of oesophagus", "malignant neoplasm of middle third of oesophagus", "malignant neoplasm of proximal third of esophagus", "malignant neoplasm of upper third esophagus", "malignant tumor of Distal Third of esophagus", "malignant tumor of Proximal Third of esophagus", "malignant tumor of abdominal esophagus", "malignant tumor of the middle Third of the esophagus"; "disease_ontology"; "DOID:5041"; , ; rdfs:label "esophageal cancer" . a owl:Class; rdfs:subClassOf ; "A gastrointestinal system disease that is located_in the intestine."; ; "DOID:10759", "DOID:11222", "DOID:11789", "DOID:8531", "DOID:8558", "DOID:8591"; "ICD10CM:K63.9", "ICD9CM:569.9", "MESH:D007410", "NCI:C26801", "SNOMEDCT_US_2018_03_01:85919009", "UMLS_CUI:C0021831"; "disease_ontology"; "DOID:5295"; ; rdfs:label "intestinal disease" . a owl:Class; rdfs:subClassOf , ; "A stomach cancer that is located_in the stomach."; ; "EFO:0000178", "NCI2004_11_17:C4911", "NCI:C4911", "UMLS_CUI:C0699791"; "cancer of the stomach", "carcinoma of stomach", "gastric carcinoma"; "disease_ontology"; "DOID:5517"; ; rdfs:label "stomach carcinoma" . a owl:Class; rdfs:subClassOf ; "An intestinal cancer that effects the long, tube-like organ that is connected to the small intestine at one end and the anus at the other."; ; "DOID:1994", "DOID:1997"; "ICD10CM:C18.9", "MESH:D015179", "NCI:C2955", "NCI:C4978", "NCI:C5105", "SNOMEDCT_US_2018_03_01:93854002", "UMLS_CUI:C0009402", "UMLS_CUI:C0346629", "UMLS_CUI:C1319315"; "disease_ontology"; "DOID:5672"; , ; rdfs:label "large intestine cancer" . a owl:Class; rdfs:subClassOf ; "An arthritis that is an autoimmune disease which develops due to an infection located elsewhere in the body. [database_cross_reference: url:http://emedicine.medscape.com/article/331347-overview][database_cross_reference: url:http://en.wikipedia.org/wiki/Reactive_arthritis]"; "Fiessinger Leroy Reiter syndrome; Post-bacterial arthropathy; postdysenteric arthropathy; Reiter's disease; Reactive arthritis; Reiter disease"; rdfs:label "reactive arthritis"@en . a owl:Class; rdfs:subClassOf ; "A musculoskeletal system disease that affects tissues such as skin, tendons, and cartilage."; ; "CSP2005:0729-7208", "MESH:D003240", "NCI:C26729", "UMLS_CUI:C0009782"; "connective tissue disorder", "disorder of connective tissue"; "disease_ontology"; "DOID:65"; ; rdfs:label "connective tissue disease" . a owl:Class; rdfs:subClassOf ; "A rheumatoid arthritis that involves an autoimmune disease onset in children under 16 which attacks the healthy cells and tissue of located_in joint."; ; "DOID:10129", "DOID:1264", "DOID:675"; "ICD10CM:M08.4", "ICD10CM:M08.40", "ICD9CM:714.3", "ICD9CM:714.31", "ICD9CM:714.32", "ICD9CM:714.33", "NCI:C26979", "NCI:C61279", "OMIM:604302", "ORDO:92", "SNOMEDCT_US_2018_03_01:74391003", "SNOMEDCT_US_2018_03_01:7441009", "SNOMEDCT_US_2018_03_01:75822003", "SNOMEDCT_US_2018_03_01:83793004", "UMLS_CUI:C0157916", "UMLS_CUI:C0157917", "UMLS_CUI:C0157918", "UMLS_CUI:C0409667"; "Pauciarticular onset juvenile chronic arthritis", "acute juvenile rheumatoid arthritis", "juvenile chronic polyarthritis", "juvenile idiopathic arthritis", "monarticular juvenile rheumatoid arthritis", "pauciarticular juvenile arthritis", "systemic juvenile rheumatoid arthritis"; "disease_ontology"; "DOID:676"; , ; rdfs:comment "Xref MGI."; rdfs:label "juvenile rheumatoid arthritis" . a owl:Class; rdfs:subClassOf ; "A liver carcinoma that has_material_basis_in undifferentiated hepatocytes."; ; "DOID:5005"; "EFO:0000182", "NCI2004_11_17:C3099", "NCI2004_11_17:C7956", "NCI:C7956", "OMIM:114550", "UMLS_CUI:C0279607"; "HCC", "Hepatoma", "adult Hepatoma", "adult primary hepatocellular carcinoma"; "disease_ontology"; "DOID:684"; , ; rdfs:comment "OMIM mapping confirmed by DO. [SN]."; rdfs:label "hepatocellular carcinoma" . a owl:Class; rdfs:subClassOf , ; "A liver cancer that has_material_basis_in epithelial cells."; ; "NCI2004_11_17:C7927", "NCI:C7927", "UMLS_CUI:C0279000"; "Liver and Intrahepatic bile duct carcinoma"; "disease_ontology"; "DOID:686"; ; rdfs:label "liver carcinoma" . a owl:Class; rdfs:subClassOf ; "A disease that manifests in a defined anatomical structure."; ; "DOID:1", "DOID:2", "DOID:5", "DOID:71", "DOID:72", "DOID:8"; "disease_ontology"; "DOID:7"; rdfs:label "disease of anatomical entity" . a owl:Class; rdfs:subClassOf , ; "A bone inflammation disease that results_in inflammation in the joints of the spine and pelvis. The disease has_symptom pain, has_symptom stiffness in the spine, has_symptom stiffness in the neck, has_symptom stiffness in the hips, has_symptom stiffness in the jaw and has_symptom stiffness in the rib cage."; ; "EFO:0003898", "GARD:9518", "ICD10CM:M45", "ICD9CM:720.0", "MESH:D013167", "NCI:C84564", "ORDO:825", "SNOMEDCT_US_2018_03_01:9631008", "UMLS_CUI:C0038013", "ls:IEDB"; "Bekhterev syndrome", "Bekhterev's disease", "Marie-Strumpell disease"; "disease_ontology"; "DOID:7147"; , ; rdfs:label "ankylosing spondylitis" . a owl:Class; rdfs:subClassOf ; "An arthritis that is an autoimmune disease which attacks healthy cells and tissue located_in joint."; ; "EFO:0000685", "ICD10CM:M06.9", "ICD9CM:714.0", "KEGG:05323", "MESH:D001172", "MTHICD9_2006:714.0", "NCI2004_11_17:C27206", "NCI:C2884", "OMIM:180300", "SNOMEDCT_US_2018_03_01:69896004", "UMLS_CUI:C0003873"; "Arthritis or polyarthritis, rheumatic", "atrophic Arthritis"; "disease_ontology"; "DOID:7148"; ; rdfs:comment "OMIM mapping confirmed by DO. [SN]."; rdfs:label "rheumatoid arthritis" . a owl:Class; rdfs:subClassOf ; "A disease of anatomical entity that is located_in the gastrointestinal tract."; ; "DOID:27", "DOID:944"; "CSP2005:1248-3545", "ICD10CM:K92.9", "ICD9CM:520-579.99", "MESH:D004066", "SNOMEDCT_US_2018_03_01:53619000", "UMLS_CUI:C0012242"; "GIT disease", "Gastroenteropathy", "alimentary system disease", "digestive system disorder", "gastrointestinal disease", "gastrointestinal disorder"; "disease_ontology"; "DOID:77"; , ; rdfs:label "gastrointestinal system disease" . a owl:Class; rdfs:subClassOf , ; "A bone inflammation disease that involves a response to irritation or injury, characterized by joint pain, swelling, stiffness located_in joint and/or redness located_in skin over the joint."; ; "ICD10CM:M19.90", "MESH:D001168", "NCI:C2883", "SNOMEDCT_US_2018_03_01:3723001", "UMLS_CUI:C0003864", "ls:IEDB"; "Inflammatory disorder of joint"; "disease_ontology"; "DOID:848"; ; rdfs:label "arthritis" . a owl:Class; rdfs:subClassOf ; "A syndrome that occurs in humans with psoriasis who also experience symptoms similar to arthritis."; ; "EFO:0003778", "ICD10CM:L40.5", "ICD10CM:L40.50", "ICD9CM:696.0", "MESH:D015535", "NCI:C61277", "SNOMEDCT_US_2018_03_01:33339001", "UMLS_CUI:C0003872"; "arthritis psoriatica", "arthropathic psoriasis"; "disease_ontology"; "psoriatic arthropathy"; "DOID:9008"; ; rdfs:label "psoriatic arthritis" . a owl:Class; rdfs:subClassOf ; "A lupus erythematosus that is an inflammation of connective tissue marked by skin rashes, joint pain and swelling, inflammation of the kidneys and inflammation of the tissue surrounding the heart."; ; "CSP2005:0729-7721", "EFO:0002690", "GARD:10253", "ICD10CM:M32", "ICD10CM:M32.9", "ICD9CM:710.0", "KEGG:05322", "MESH:D008180", "MTH:U002054", "NCI2004_11_17:C3201", "NCI:C3201", "OMIM:152700", "OMIM:300809", "OMIM:605480", "OMIM:608437", "OMIM:609903", "OMIM:609939", "OMIM:610065", "OMIM:610066", "OMIM:612254", "OMIM:612378", "OMIM:613145", "OMIM:614420", "ORDO:536", "SNOMEDCT_US_2018_03_01:55464009", "UMLS_CUI:C0024141", "ls:IEDB"; "Lupus Erythematosus, systemic", "SLE - Lupus Erythematosus, systemic", "disseminated lupus erythematosus"; "disease_ontology"; "DOID:9074"; , ; rdfs:comment "Xref MGI."; rdfs:label "systemic lupus erythematosus" . a owl:Class; rdfs:subClassOf ; "A large intestine cancer that is located_in the colon and/or located_in the rectum."; ; "KEGG:05210", "MESH:D015179", "OMIM:114500", "OMIM:611469", "OMIM:612230", "OMIM:612231", "OMIM:612232", "OMIM:612589", "OMIM:612590", "OMIM:612592", "UMLS_CUI:C1527249"; "disease_ontology"; "DOID:9256"; ; rdfs:comment """Xref MGI. OMIM mapping confirmed by DO. [SN]."""; rdfs:label "colorectal cancer" . a owl:Class; rdfs:subClassOf ; "a material entity (1) containing at least one scattered molecular aggregate as part that is the bearer of an active ingredient role and (2) that is itself the bearer of a clinical drug role"@en; "William Hogan"@en; ; "William Hogan"@en; rdfs:label "drug product"@en . a owl:Class; rdfs:subClassOf ; "A biome is an ecosystem to which resident ecological communities have evolved adaptations."; ; "EcoLexicon:biome", "LTER:173"; "major habitat type"; "EcosytemType"; rdfs:comment "There has been some concern raised (see Issue #143) about the usefulness of the assertion that organisms have evolved within a given biome. They may have evolved adaptations elsewhere and demonstrating one or the other is often not feasible. Consider relabelling to \"environmental system determined by an ecological community\" or similar."; rdfs:label "biome" . a owl:Class; rdfs:subClassOf ; "environmental material"; "A portion of environmental material is a fiat object which forms the medium or part of the medium of an environmental system."; , ; rdfs:label "environmental material" . a owl:Class; rdfs:subClassOf ; "A system which has the disposition to environ one or more material entities."; ; "2013-09-23T16:04:08Z"; "EcoLexicon:environment"; "environment"; rdfs:comment "In ENVO's alignment with the Basic Formal Ontology, this class is being considered as a subclass of a proposed BFO class \"system\". The relation \"environed_by\" is also under development. Roughly, a system which includes a material entity (at least partially) within its site and causally influences that entity may be considered to environ it. Following the completion of this alignment, this class' definition and the definitions of its subclasses will be revised."; rdfs:label "environmental system" . a owl:Class; rdfs:subClassOf ; "An environmental system which can sustain and allow the growth of an ecological population."; ; "EcoLexicon:habitat", "LTER:238", "SWEETRealm:Habitat", "https://en.wikipedia.org/wiki/Habitat"; rdfs:comment "A habitat's specificity to an ecological population differentiates it from other environment classes."; rdfs:label "habitat"@en . a owl:Class; rdfs:subClassOf ; "An environmental system which includes both living and non-living components."; ; rdfs:comment "This class will be primarily filled by inference, any environmental system which necessarily includes living parts should be autoclassified here."; rdfs:label "ecosystem"@en . a owl:Class; rdfs:subClassOf ; "biological_process"; "A biological process represents a specific objective that the organism is genetically programmed to achieve. Biological processes are often described by their outcome or ending state, e.g., the biological process of cell division results in the creation of two daughter cells (a divided cell) from a single parent cell. A biological process is accomplished by a particular set of molecular functions carried out by specific gene products (or macromolecular complexes), often in a highly regulated manner and in a particular temporal sequence."; , ; "janelomax"; "2012-09-19T15:05:24Z"; "GO:0000004", "GO:0007582", "GO:0044699"; "Wikipedia:Biological_process"; "biological process", "physiological process"; "biological_process"; "single organism process", "single-organism process"; "GO:0008150"; , , , , , , , , ; rdfs:comment "Note that, in addition to forming the root of the biological process ontology, this term is recommended for use for the annotation of gene products whose biological process is unknown. When this term is used for annotation, it indicates that no information was available about the biological process of the gene product annotated as of the date the annotation was made; the evidence code \"no data\" (ND), is used to indicate this."; rdfs:label "biological_process" . a owl:Class; rdfs:subClassOf ; "gene expression"; "The process in which a gene's sequence is converted into a mature gene product or products (proteins or RNA). This includes the production of an RNA transcript as well as any processing to produce a mature RNA product or an mRNA or circRNA (for protein-coding genes) and the translation of that mRNA or circRNA into protein. Protein maturation is included when required to form an active form of a product from an inactive precursor form."; , ; rdfs:label "gene expression" . a owl:Class; rdfs:subClassOf ; "Any process in which an organism has an effect on an organism of a different species."; ; "interaction with another species", "interspecies interaction", "interspecies interaction with other organisms"; "biological_process"; "GO:0044419"; , ; rdfs:label "interspecies interaction between organisms" . a owl:Class; rdfs:subClassOf ; "An interaction between two organisms living together in more or less intimate association. The term host is used for the larger (macro) of the two members of a symbiosis; the various forms of symbiosis include parasitism, commensalism and mutualism."; ; "biological_process"; "GO:0051701"; rdfs:label "interaction with host" . a owl:Class; rdfs:subClassOf ; "A biological process which involves another organism of the same or different species."; ; "GO:0051706"; "interaction between organisms", "physiological interaction between organisms", "physiological interaction with other organism"; "biological_process"; "GO:0051704"; ; rdfs:label "multi-organism process" . a owl:Class; rdfs:subClassOf ; "A phenotypic abnormality."; ; "UMLS:C4021819"; "Organ abnormality"; "human_phenotype"; "HP:0000118"; rdfs:comment "This is the root of the phenotypic abnormality subontology of the HPO."; rdfs:label "Phenotypic abnormality" . a owl:Class; rdfs:subClassOf ; "Accumulation of substantial excess body fat."; ; "MSH:D009765", "SNOMEDCT_US:414915002", "SNOMEDCT_US:414916001", "UMLS:C0028754"; "Having too much body fat", "Obesity"; "human_phenotype"; "HP:0001513"; rdfs:label "Obesity" . a owl:Class; rdfs:subClassOf ; "Abnormally increased frequency of loose or watery bowel movements."; ; "MSH:D003967", "SNOMEDCT_US:267060006", "SNOMEDCT_US:62315008", "UMLS:C0011991"; "Diarrhea", "Diarrhoea", "Watery stool"; "human_phenotype"; "HP:0002014"; rdfs:label "Diarrhea" . a owl:Class; rdfs:subClassOf ; "The presence of chronic diarrhea, which is usually taken to mean diarrhea that has persisted for over 4 weeks."; ; "SNOMEDCT_US:236071009", "UMLS:C0401151"; "Chronic diarrhea"; "human_phenotype"; "Diarrhea, recurrent", "Recurrent diarrhea"; "HP:0002028"; rdfs:label "Chronic diarrhea" . a owl:Class; rdfs:subClassOf ; "measurement unit label"@en; "Examples of measurement unit labels are liters, inches, weight per volume."@en; ; "A measurement unit label is as a label that is part of a scalar measurement datum and denotes a unit of measure."@en; """2009-03-16: provenance: a term measurement unit was proposed for OBI (OBI_0000176) , edited by Chris Stoeckert and Cristian Cocos, and subsequently moved to IAO where the objective for which the original term was defined was satisfied with the definition of this, different, term."""@en, "2009-03-16: review of this term done during during the OBI workshop winter 2009 and the current definition was considered acceptable for use in OBI. If there is a need to modify this definition please notify OBI."@en; "PERSON: Alan Ruttenberg"@en, "PERSON: Melanie Courtot"@en; ; rdfs:label "measurement unit label"@en . a owl:Class; rdfs:subClassOf ; "objective specification"@en; "In the protocol of a ChIP assay the objective specification says to identify protein and DNA interaction."@en; ; "a directive information entity that describes an intended process endpoint. When part of a plan specification the concretization is realized in a planned process in which the bearer tries to effect the world so that the process endpoint is achieved."@en; "2009-03-16: original definition when imported from OBI read: \"objective is an non realizable information entity which can serve as that proper part of a plan towards which the realization of the plan is directed.\""@en, "2014-03-31: In the example of usage (\"In the protocol of a ChIP assay the objective specification says to identify protein and DNA interaction\") there is a protocol which is the ChIP assay protocol. In addition to being concretized on paper, the protocol can be concretized as a realizable entity, such as a plan that inheres in a person. The objective specification is the part that says that some protein and DNA interactions are identified. This is a specification of a process endpoint: the boundary in the process before which they are not identified and after which they are. During the realization of the plan, the goal is to get to the point of having the interactions, and participants in the realization of the plan try to do that."@en, "Answers the question, why did you do this experiment?"@en; "PERSON: Alan Ruttenberg"@en, "PERSON: Barry Smith"@en, "PERSON: Bjoern Peters"@en, "PERSON: Jennifer Fostel"@en; "goal specification"@en; "OBI Plan and Planned Process/Roles Branch"@en, "OBI_0000217"@en; ; rdfs:label "objective specification"@en . a owl:Class; rdfs:subClassOf ; "Pour the contents of flask 1 into flask 2"@en; ; "a directive information entity that describes an action the bearer will take"@en; "Alan Ruttenberg"@en; "OBI Plan and Planned Process branch"@en; ; rdfs:label "action specification"@en . a owl:Class; rdfs:subClassOf ; "datum label"@en; ; "A label is a symbol that is part of some other datum and is used to either partially define the denotation of that datum or to provide a means for identifying the datum as a member of the set of data with the same label"@en; "http://www.golovchenko.org/cgi-bin/wnsearch?q=label#4n"@en; "GROUP: IAO"@en; """9/22/11 BP: changed the rdfs:label for this class from 'label' to 'datum label' to convey that this class is not intended to cover all kinds of labels (stickers, radiolabels, etc.), and not even all kind of textual labels, but rather the kind of labels occuring in a datum. """; ; rdfs:label "datum label"@en . a owl:Class; rdfs:subClassOf ; "data entity"@en, "data item"@en; "Data items include counts of things, analyte concentrations, and statistical summaries."@en; ; "a data item is an information content entity that is intended to be a truthful statement about something (modulo, e.g., measurement precision or other systematic errors) and is constructed/acquired by a method which reliably tends to produce (approximately) truthful statements."@en; "2/2/2009 Alan and Bjoern discussing FACS run output data. This is a data item because it is about the cell population. Each element records an event and is typically further composed a set of measurment data items that record the fluorescent intensity stimulated by one of the lasers."@en, "2009-03-16: data item deliberatly ambiguous: we merged data set and datum to be one entity, not knowing how to define singular versus plural. So data item is more general than datum."@en, "2009-03-16: removed datum as alternative term as datum specifically refers to singular form, and is thus not an exact synonym."@en, "2014-03-31: See discussion at http://odontomachus.wordpress.com/2014/03/30/aboutness-objects-propositions/", """JAR: datum -- well, this will be very tricky to define, but maybe some information-like stuff that might be put into a computer and that is meant, by someone, to denote and/or to be interpreted by some process... I would include lists, tables, sentences... I think I might defer to Barry, or to Brian Cantwell Smith JAR: A data item is an approximately justified approximately true approximate belief"""@en; "PERSON: Alan Ruttenberg"@en, "PERSON: Chris Stoeckert"@en, "PERSON: Jonathan Rees"@en; "data"@en; ; rdfs:label "data entity"@en . a owl:Class; rdfs:subClassOf , _:42b870; "information content entity"@en; "Examples of information content entites include journal articles, data, graphical layouts, and graphs."@en; ; "A generically dependent continuant that is about some thing."@en; "2014-03-10: The use of \"thing\" is intended to be general enough to include universals and configurations (see https://groups.google.com/d/msg/information-ontology/GBxvYZCk1oc/-L6B5fSBBTQJ)."@en, """information_content_entity 'is_encoded_in' some digital_entity in obi before split (040907). information_content_entity 'is_encoded_in' some physical_document in obi before split (040907). Previous. An information content entity is a non-realizable information entity that 'is encoded in' some digital or physical entity."""@en; "PERSON: Chris Stoeckert"@en; "OBI_0000142"@en; ; rdfs:label "information content entity"@en . _:42b870 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:42b880, _:42b890, _:42b8a0; "10 feet. 3 ml."@en; ; "a scalar measurement datum is a measurement datum that is composed of two parts, numerals and a unit label."@en; """2009-03-16: we decided to keep datum singular in scalar measurement datum, as in this case we explicitly refer to the singular form"""@en, "Would write this as: has_part some 'measurement unit label' and has_part some numeral and has_part exactly 2, except for the fact that this won't let us take advantage of OWL reasoning over the numbers. Instead use has measurment value property to represent the same. Use has measurement unit label (subproperty of has_part) so we can easily say that there is only one of them."@en; "PERSON: Alan Ruttenberg"@en, "PERSON: Melanie Courtot"@en; ; rdfs:label "scalar measurement datum"@en . _:42b880 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:42b890 a owl:Restriction; owl:onProperty ; owl:minCardinality "1"^^xsd:nonNegativeInteger . _:42b8a0 a owl:Restriction; owl:onProperty ; owl:minCardinality "1"^^xsd:nonNegativeInteger . a owl:Class; rdfs:subClassOf , _:42b8b0; ; "An information content entity whose concretizations indicate to their bearer how to realize them in a process."@en; "2009-03-16: provenance: a term realizable information entity was proposed for OBI (OBI_0000337) , edited by the PlanAndPlannedProcess branch. Original definition was \"is the specification of a process that can be concretized and realized by an actor\" with alternative term \"instruction\".It has been subsequently moved to IAO where the objective for which the original term was defined was satisfied with the definitionof this, different, term."@en, "2013-05-30 Alan Ruttenberg: What differentiates a directive information entity from an information concretization is that it can have concretizations that are either qualities or realizable entities. The concretizations that are realizable entities are created when an individual chooses to take up the direction, i.e. has the intention to (try to) realize it."@en, "8/6/2009 Alan Ruttenberg: Changed label from \"information entity about a realizable\" after discussions at ICBO"@en, "Werner pushed back on calling it realizable information entity as it isn't realizable. However this name isn't right either. An example would be a recipe. The realizable entity would be a plan, but the information entity isn't about the plan, it, once concretized, *is* the plan. -Alan"@en; "PERSON: Alan Ruttenberg"@en, "PERSON: Bjoern Peters"@en; ; rdfs:label "directive information entity"@en . _:42b8b0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; owl:equivalentClass _:42b8c0; rdfs:subClassOf ; "curation status specification"@en; ; "The curation status of the term. The allowed values come from an enumerated list of predefined terms. See the specification of these instances for more detailed definitions of each enumerated value."@en; "Better to represent curation as a process with parts and then relate labels to that process (in IAO meeting)"@en; "PERSON:Bill Bug"@en; "GROUP:OBI:"@en, "OBI_0000266"@en; , ; rdfs:label "curation status specification"@en . _:42b8c0 a owl:Class; owl:oneOf _:42b8d0 . _:42b8d0 rdf:first ; rdf:rest _:42b8e0 . _:42b8e0 rdf:first ; rdf:rest _:42b8f0 . _:42b8f0 rdf:first ; rdf:rest _:42b900 . _:42b900 rdf:first ; rdf:rest _:42b910 . _:42b910 rdf:first ; rdf:rest _:42b920 . _:42b920 rdf:first ; rdf:rest _:42b930 . _:42b930 rdf:first ; rdf:rest _:42b940 . _:42b940 rdf:first ; rdf:rest _:42b950 . _:42b950 rdf:first ; rdf:rest rdf:nil . a owl:Class; rdfs:subClassOf ; "data about an ontology part"@en; "Data about an ontology part is a data item about a part of an ontology, for example a term"@en, "data about an ontology part is a data item about a part of an ontology, for example a term"@en; "Person:Alan Ruttenberg", "Person:Alan Ruttenberg"@en; ; rdfs:label "data about an ontology part"@en . a owl:Class; rdfs:subClassOf , _:42b960, _:42b970; "plan specification"@en; "PMID: 18323827.Nat Med. 2008 Mar;14(3):226.New plan proposed to help resolve conflicting medical advice."@en; ; "A directive information entity with action specifications and objective specifications as parts that, when concretized, is realized in a process in which the bearer tries to achieve the objectives by taking the actions specified."@en; "2009-03-16: provenance: a term a plan was proposed for OBI (OBI_0000344) , edited by the PlanAndPlannedProcess branch. Original definition was \" a plan is a specification of a process that is realized by an actor to achieve the objective specified as part of the plan\". It has been subsequently moved to IAO where the objective for which the original term was defined was satisfied with the definitionof this, different, term."@en, "2014-03-31: A plan specification can have other parts, such as conditional specifications."@en, "Alternative previous definition: a plan is a set of instructions that specify how an objective should be achieved"@en; "Alan Ruttenberg"@en; "OBI Plan and Planned Process branch"@en, "OBI_0000344"@en; ; rdfs:comment """2/3/2009 Comment from OBI review. Action specification not well enough specified. Conditional specification not well enough specified. Question whether all plan specifications have objective specifications. Request that IAO either clarify these or change definitions not to use them"""@en; rdfs:label "plan specification"@en . _:42b960 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:42b970 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:42b980; "measurement datum"@en; "Examples of measurement data are the recoding of the weight of a mouse as {40,mass,\"grams\"}, the recording of an observation of the behavior of the mouse {,process,\"agitated\"}, the recording of the expression level of a gene as measured through the process of microarray experiment {3.4,luminosity,}."@en; ; "A measurement datum is an information content entity that is a recording of the output of a measurement such as produced by a device."@en; "2/2/2009 is_specified_output of some assay?"@en; "person:Chris Stoeckert"@en; "OBI_0000305"@en, "group:OBI"@en; ; rdfs:label "measurement datum"@en . _:42b980 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; owl:equivalentClass _:42b990; rdfs:subClassOf ; "obsolescence reason specification"@en; ; "The reason for which a term has been deprecated. The allowed values come from an enumerated list of predefined terms. See the specification of these instances for more detailed definitions of each enumerated value."@en; "The creation of this class has been inspired in part by Werner Ceusters' paper, Applying evolutionary terminology auditing to the Gene Ontology."@en; "PERSON: Alan Ruttenberg"@en, "PERSON: Melanie Courtot"@en; rdfs:label "obsolescence reason specification"@en . _:42b990 a owl:Class; owl:oneOf _:42b9a0 . _:42b9a0 rdf:first ; rdf:rest _:42b9b0 . _:42b9b0 rdf:first ; rdf:rest _:42b9c0 . _:42b9c0 rdf:first ; rdf:rest _:42b9d0 . _:42b9d0 rdf:first ; rdf:rest _:42b9e0 . _:42b9e0 rdf:first ; rdf:rest _:42b9f0 . _:42b9f0 rdf:first ; rdf:rest rdf:nil . a owl:Class; owl:equivalentClass _:42ba00; rdfs:subClassOf ; "denotator type"@en; "The Basic Formal Ontology ontology makes a distinction between Universals and defined classes, where the formal are \"natural kinds\" and the latter arbitrary collections of entities."@en; "A denotator type indicates how a term should be interpreted from an ontological perspective."@en; "Alan Ruttenberg"@en; "Barry Smith, Werner Ceusters"@en; rdfs:label "denotator type"@en . _:42ba00 a owl:Class; owl:oneOf _:42ba10 . _:42ba10 rdf:first ; rdf:rest _:42ba20 . _:42ba20 rdf:first ; rdf:rest _:42ba30 . _:42ba30 rdf:first ; rdf:rest rdf:nil . a owl:Class; rdfs:subClassOf , _:42ba40; ; "A scalar measurement datum that is the result of measuring a temporal interval"@en; "2009/09/28 Alan Ruttenberg. Fucoidan-use-case"@en; "Person:Alan Ruttenberg"@en; ; rdfs:label "time measurement datum"@en . _:42ba40 a owl:Class; owl:intersectionOf _:42ba60 . _:42ba60 rdf:first _:42ba50; rdf:rest _:42ba80 . _:42ba50 a owl:Restriction; owl:onProperty ; owl:allValuesFrom . _:42ba80 rdf:first _:42ba70; rdf:rest rdf:nil . _:42ba70 a owl:Restriction; owl:onProperty ; owl:allValuesFrom . a owl:Class; rdfs:subClassOf ; "ontology module"@en; "I have placed this under 'data about an ontology part', but this can be discussed. I think this is OK if 'part' is interpreted reflexively, as an ontology module is the whole ontology rather than part of it."@en; "ontology file"@en; "This class and it's subclasses are applied to OWL ontologies. Using an rdf:type triple will result in problems with OWL-DL. I propose that dcterms:type is instead used to connect an ontology URI with a class from this hierarchy. The class hierarchy is not disjoint, so multiple assertions can be made about a single ontology."@en; rdfs:label "ontology module"@en . a owl:Class; rdfs:subClassOf ; "base ontology module"@en; "An ontology module that comprises only of asserted axioms local to the ontology, excludes import directives, and excludes axioms or declarations from external ontologies."@en; rdfs:label "base ontology module"@en; rdfs:seeAlso . a owl:Class; rdfs:subClassOf ; "editors ontology module"@en; "An ontology module that is intended to be directly edited, typically managed in source control, and typically not intended for direct consumption by end-users."@en; "source ontology module"@en; rdfs:label "editors ontology module"@en . a owl:Class; rdfs:subClassOf ; "main release ontology module"@en; "An ontology module that is intended to be the primary release product and the one consumed by the majority of tools."@en; "TODO: Add logical axioms that state that a main release ontology module is derived from (directly or indirectly) an editors module"@en; rdfs:label "main release ontology module"@en . a owl:Class; rdfs:subClassOf ; "bridge ontology module"@en; "An ontology module that consists entirely of axioms that connect or bridge two distinct ontology modules. For example, the Uberon-to-ZFA bridge module."@en; rdfs:label "bridge ontology module"@en; rdfs:seeAlso . a owl:Class; rdfs:subClassOf ; "import ontology module"@en; "A subset ontology module that is intended to be imported from another ontology."@en; "TODO: add axioms that indicate this is the output of a module extraction process."@en; "import file"@en; rdfs:label "import ontology module"@en; rdfs:seeAlso . a owl:Class; rdfs:subClassOf ; "subset ontology module"@en; "An ontology module that is extracted from a main ontology module and includes only a subset of entities or axioms."@en; "ontology slim"@en, "subset ontology"@en; rdfs:label "subset ontology module"@en; rdfs:seeAlso , . a owl:Class; rdfs:subClassOf ; "curation subset ontology module"@en; "A subset ontology that is intended as a whitelist for curators using the ontology. Such a subset will exclude classes that curators should not use for curation."@en; rdfs:label "curation subset ontology module"@en . a owl:Class; rdfs:subClassOf ; "analysis ontology module"@en; "An ontology module that is intended for usage in analysis or discovery applications."@en; rdfs:label "analysis subset ontology module"@en . a owl:Class; rdfs:subClassOf ; "single layer ontology module"@en; "A subset ontology that is largely comprised of a single layer or strata in an ontology class hierarchy. The purpose is typically for rolling up for visualization. The classes in the layer need not be disjoint."@en; "ribbon subset"@en; rdfs:label "single layer subset ontology module"@en . a owl:Class; rdfs:subClassOf ; "exclusion subset ontology module"@en; "A subset of an ontology that is intended to be excluded for some purpose. For example, a blacklist of classes."@en; "antislim"@en; rdfs:label "exclusion subset ontology module"@en . a owl:Class; rdfs:subClassOf ; "external import ontology module"@en; "An imported ontology module that is derived from an external ontology. Derivation methods include the OWLAPI SLME approach."@en; "external import"@en; rdfs:label "external import ontology module"@en . a owl:Class; rdfs:subClassOf ; "species subset ontology module"@en; "A subset ontology that is crafted to either include or exclude a taxonomic grouping of species."@en; "taxon subset"@en; rdfs:label "species subset ontology module"@en; rdfs:seeAlso . a owl:Class; rdfs:subClassOf ; "reasoned ontology module"@en; "An ontology module that contains axioms generated by a reasoner. The generated axioms are typically direct SubClassOf axioms, but other possibilities are available."@en; rdfs:label "reasoned ontology module"@en; rdfs:seeAlso . a owl:Class; rdfs:subClassOf ; "generated ontology module"@en; "An ontology module that is automatically generated, for example via a SPARQL query or via template and a CSV."@en; "TODO: Add axioms (using PROV-O?) that indicate this is the output-of some reasoning process"@en; rdfs:label "generated ontology module"@en . a owl:Class; rdfs:subClassOf ; "template generated ontology module"@en; "An ontology module that is automatically generated from a template specification and fillers for slots in that template."@en; rdfs:label "template generated ontology module"@en; rdfs:seeAlso , , . a owl:Class; rdfs:subClassOf ; "taxonomic bridge ontology module"@en; rdfs:label "taxonomic bridge ontology module"@en . a owl:Class; rdfs:subClassOf ; "ontology module subsetted by expressivity"@en; rdfs:label "ontology module subsetted by expressivity"@en . a owl:Class; rdfs:subClassOf ; "obo basic subset ontology module"@en; """A subset ontology that is designed for basic applications to continue to make certain simplifying assumptions; many of these simplifying assumptions were based on the initial version of the Gene Ontology, and have become enshrined in many popular and useful tools such as term enrichment tools. Examples of such assumptions include: traversing the ontology graph ignoring relationship types using a naive algorithm will not lead to cycles (i.e. the ontology is a DAG); every referenced term is declared in the ontology (i.e. there are no dangling clauses). An ontology is OBO Basic if and only if it has the following characteristics: DAG Unidirectional No Dangling Clauses Fully Asserted Fully Labeled No equivalence axioms Singly labeled edges No qualifier lists No disjointness axioms No owl-axioms header No imports"""@en; rdfs:label "obo basic subset ontology module"@en; rdfs:seeAlso . a owl:Class; rdfs:subClassOf ; "ontology module subsetted by OWL profile"@en; rdfs:label "ontology module subsetted by OWL profile"@en . a owl:Class; rdfs:subClassOf ; "EL++ ontology module"@en; rdfs:label "EL++ ontology module"@en . a owl:Class; rdfs:subClassOf ; "infection"@en; "A part of an extended organism that itself has as part a population of one or more infectious agents and that (1) exists as a result of processes initiated by members of the infectious agent population and is (2) clinically abnormal in virtue of the presence of this infectious agent population, or (3) has a disposition to bring clinical abnormality to immunocompetent organisms of the same Species as the host (the organism corresponding to the extended organism) through transmission of a member or offspring of a member of the infectious agent population."@en; , ; rdfs:label "infection"@en . a owl:Class; rdfs:subClassOf ; "Interaction is a processual entity that has two or more participants (i.e., interactors) that have an effect upon one another. "@en; "YH, ZX"; ; "interact, interacted, interacting, interaction, interaction, interactor, interactors, interacts, participates; plays a role, contribute, contributed, contributes, contributing, engagement, engagements, engages, engaging, involve, involved, involves, involving, act, acted, acting, acts"; rdfs:label "interaction" . a owl:Class; rdfs:subClassOf ; "Enthesitis-related juvenile idiopathic arthritis is a subtype of juvenile idiopathic arthritis that is characterized by both arthritis and inflammation of an enthesitis site (the point at which a ligament, tendon, or joint capsule attaches to the bone). Signs and symptoms generally develop in late childhood or early adolescence and include pain, tenderness, and swelling in joints and at the enthesis. The knee and the back of the ankle (at the Achilles tendon) are the most commonly affected parts of the body. The underlying cause of enthesitis-related juvenile idiopathic arthritis is currently unknown (idiopathic). It is very rare for more than one member of a family to have juvenile arthritis; however, research suggests that having a family member with juvenile arthritis or any autoimmune disease may increase the risk of having juvenile arthritis, in general. Treatment usually involves different types of medications to help manage symptoms and/or physical therapy ."; ; "GARD:0010969", "ICD10:M08.8", "NCIT:C119024", "Orphanet:85438", "SCTID:410801005"; "enthesitis-related JIA", "era"; "enthesitis related arthritis, juvenile", "enthesitis-related arthritis", "juvenile enthesitis-related arthritis", "juvenile spondylarthropathy"; "MONDO:0019437"; , ; rdfs:label "enthesitis-related juvenile idiopathic arthritis"; rdfs:seeAlso "https://rarediseases.info.nih.gov/diseases/10969/enthesitis-related-juvenile-idiopathic-arthritis"^^xsd:anyURI; ; , , . a owl:Class; rdfs:subClassOf ; "Coprobacillus"; ; rdfs:label "Coprobacillus" . a owl:Class; rdfs:subClassOf ; "Mus musculus"; "house mouse", "mouse"; ; rdfs:label "Mus musculus" . a owl:Class; rdfs:subClassOf ; "Rattus"; "rat", "rats"; ; rdfs:label "Rattus" . a owl:Class; rdfs:subClassOf ; "Rattus norvegicus"; "Norway rat", "brown rat", "rat", "rats"; ; rdfs:label "Rattus norvegicus" . a owl:Class; rdfs:subClassOf ; "Capnocytophaga"; ; rdfs:label "Capnocytophaga" . a owl:Class; rdfs:subClassOf ; rdfs:label "Capnocytophaga gingivalis"@en . a owl:Class; rdfs:subClassOf ; "Beggiatoa"; ; rdfs:label "Beggiatoa" . a owl:Class; rdfs:subClassOf ; "Collinsella"; ; rdfs:label "Collinsella" . a owl:Class; rdfs:subClassOf ; "Solobacterium moorei"; ; rdfs:label "Solobacterium moorei" . a owl:Class; rdfs:subClassOf , _:42ba90; "Viruses"; , ; rdfs:label "Viruses" . _:42ba90 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf ; "Rhodococcus pyridinivorans"; ; rdfs:label "Rhodococcus pyridinivorans" . a owl:Class; rdfs:subClassOf ; "Hepatitis B virus"; "Human hepatitis B virus", "hepatitis B virus (HBV)", "hepatitis B virus HBV", "hepatitis B virus, HBV", "human hepatitis B virus HBV"; ; rdfs:label "Hepatitis B virus" . a owl:Class; rdfs:subClassOf , _:42baa0; "Leptotrichia sp."; ; rdfs:label "Leptotrichia sp." . _:42baa0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf ; "Megasphaera elsdenii DSM 20460"; "Megasphaera elsdenii str. DSM 20460", "Megasphaera elsdenii strain DSM 20460"; ; rdfs:label "Megasphaera elsdenii DSM 20460" . a owl:Class; rdfs:subClassOf ; "Pseudoflavonifractor capillosus"; ; rdfs:label "Pseudoflavonifractor capillosus" . a owl:Class; rdfs:subClassOf ; "Badula fragilis"; ; rdfs:label "Badula fragilis" . a owl:Class; rdfs:subClassOf ; "Anaerovorax"; ; rdfs:label "Anaerovorax" . a owl:Class; rdfs:subClassOf ; "Leptotrichiaceae"; ; rdfs:label "Leptotrichiaceae" . a owl:Class; rdfs:subClassOf ; "Fusicatenibacter saccharivorans"; ; rdfs:label "Fusicatenibacter saccharivorans" . a owl:Class; rdfs:subClassOf ; "Parasporobacterium"; ; rdfs:label "Parasporobacterium" . a owl:Class; rdfs:subClassOf ; "Coprococcus catus"; ; rdfs:label "Coprococcus catus" . a owl:Class; rdfs:subClassOf ; "Lachnoanaerobaculum"; ; rdfs:label "Lachnoanaerobaculum" . a owl:Class; rdfs:subClassOf ; "Granulicatella"; ; rdfs:label "Granulicatella" . a owl:Class; rdfs:subClassOf ; "Euteleostomi"; "bony vertebrates"; ; rdfs:label "Euteleostomi" . a owl:Class; rdfs:subClassOf ; "Cutibacterium acnes 17B"; ; rdfs:label "Cutibacterium acnes 17B" . a owl:Class; rdfs:subClassOf ; "Bulleidia"; ; rdfs:label "Bulleidia" . a owl:Class; rdfs:subClassOf ; "Methylobacteriaceae"; "Methylobacterium group"; ; rdfs:label "Methylobacteriaceae" . a owl:Class; rdfs:subClassOf ; "Burkholderiaceae"; ; rdfs:label "Burkholderiaceae" . a owl:Class; rdfs:subClassOf ; "Ecdysozoa"; ; rdfs:label "Ecdysozoa" . a owl:Class; rdfs:subClassOf ; "Solobacterium sp. S4-A19"; ; rdfs:label "Solobacterium sp. S4-A19" . a owl:Class; rdfs:subClassOf ; "Pseudomonadota"; "proteobacteria", "purple photosynthetic bacteria and relatives"; ; rdfs:label "Pseudomonadota" . a owl:Class; rdfs:subClassOf ; "Solobacterium"; ; rdfs:label "Solobacterium" . a owl:Class; rdfs:subClassOf ; "Streptococcus rubneri"; ; rdfs:label "Streptococcus rubneri" . a owl:Class; rdfs:subClassOf ; "Gammaproteobacteria"; "g-proteobacteria"; ; rdfs:label "Gammaproteobacteria" . a owl:Class; rdfs:subClassOf ; "Bacillota"; "clostridial firmicutes", "firmicutes", "low G+C Gram-positive bacteria", "low GC Gram+"; ; rdfs:label "Bacillota" . a owl:Class; rdfs:subClassOf ; "Peptostreptococcus"; ; rdfs:label "Peptostreptococcus" . a owl:Class; rdfs:subClassOf ; "Peptostreptococcus anaerobius"; ; rdfs:label "Peptostreptococcus anaerobius" . a owl:Class; rdfs:subClassOf ; "Clostridium sp. CAG:217"; ; rdfs:label "Clostridium sp. CAG:217" . a owl:Class; rdfs:subClassOf ; "Clostridium sp. CAG:510"; ; rdfs:label "Clostridium sp. CAG:510" . a owl:Class; rdfs:subClassOf ; "Clostridium sp. CAG:62"; ; rdfs:label "Clostridium sp. CAG:62" . a owl:Class; rdfs:subClassOf ; "Eubacterium sp. CAG:156"; ; rdfs:label "Eubacterium sp. CAG:156" . a owl:Class; rdfs:subClassOf ; "Eubacterium sp. CAG:202"; ; rdfs:label "Eubacterium sp. CAG:202" . a owl:Class; rdfs:subClassOf ; "Ruminococcus"; ; rdfs:label "Ruminococcus" . a owl:Class; rdfs:subClassOf ; "Ruminococcus albus"; ; rdfs:label "Ruminococcus albus" . a owl:Class; rdfs:subClassOf ; "Micrococcaceae"; ; rdfs:label "Micrococcaceae" . a owl:Class; rdfs:subClassOf , _:42bab0; rdfs:label "Micrococcus"@en . _:42bab0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf ; "Human immunodeficiency virus"; ; rdfs:label "Human immunodeficiency virus" . a owl:Class; rdfs:subClassOf ; "Staphylococcus"; ; rdfs:label "Staphylococcus" . a owl:Class; rdfs:subClassOf ; "Staphylococcus aureus"; ; rdfs:label "Staphylococcus aureus" . a owl:Class; rdfs:subClassOf ; "Erysipelotrichaceae"; ; rdfs:label "Erysipelotrichaceae" . a owl:Class; rdfs:subClassOf ; "Acidovorax"; "Acidivorax"; ; rdfs:label "Acidovorax" . a owl:Class; rdfs:subClassOf ; "Deinococcus"; ; rdfs:label "Deinococcus" . a owl:Class; rdfs:subClassOf ; "Streptococcaceae"; ; rdfs:label "Streptococcaceae" . a owl:Class; rdfs:subClassOf ; "Streptococcus"; ; rdfs:label "Streptococcus" . a owl:Class; rdfs:subClassOf ; rdfs:label "Streptococcus sanguinis"@en . a owl:Class; rdfs:subClassOf ; "Streptococcus thermophilus"; ; rdfs:label "Streptococcus thermophilus" . a owl:Class; rdfs:subClassOf ; "Streptococcus pneumoniae"; ; rdfs:label "Streptococcus pneumoniae" . a owl:Class; rdfs:subClassOf ; "Streptococcus pyogenes"; ; rdfs:label "Streptococcus pyogenes" . a owl:Class; rdfs:subClassOf ; "Streptococcus equinus"; ; rdfs:label "Streptococcus equinus" . a owl:Class; rdfs:subClassOf ; "Olsenella"; ; rdfs:label "Olsenella" . a owl:Class; rdfs:subClassOf ; "Enterococcus"; ; rdfs:label "Enterococcus" . a owl:Class; rdfs:subClassOf ; "Enterococcus faecalis"; ; rdfs:label "Enterococcus faecalis" . a owl:Class; rdfs:subClassOf ; "Escherichia coli #1/H766"; ; rdfs:label "Escherichia coli #1/H766" . a owl:Class; rdfs:subClassOf ; "Alteromonadales"; ; rdfs:label "Alteromonadales" . a owl:Class; rdfs:subClassOf ; "Aeromonadales"; ; rdfs:label "Aeromonadales" . a owl:Class; rdfs:subClassOf ; "Lactococcus"; "lactic streptococci"; ; rdfs:label "Lactococcus" . a owl:Class; rdfs:subClassOf ; "Spirochaetales"; ; rdfs:label "Spirochaetales" . a owl:Class; rdfs:subClassOf ; "Sphingomonas"; ; rdfs:label "Sphingomonas" . a owl:Class; rdfs:subClassOf ; "Spirochaetaceae"; ; rdfs:label "Spirochaetaceae" . a owl:Class; rdfs:subClassOf ; "Gemella"; ; rdfs:label "Gemella" . a owl:Class; rdfs:subClassOf ; "Atopobium"; ; rdfs:label "Atopobium" . a owl:Class; rdfs:subClassOf ; "Lancefieldella parvula"; ; rdfs:label "Lancefieldella parvula" . a owl:Class; rdfs:subClassOf ; "Bacillales"; ; rdfs:label "Bacillales" . a owl:Class; rdfs:subClassOf ; "Intestinimonas"; ; rdfs:label "Intestinimonas" . a owl:Class; rdfs:subClassOf ; "Lachnobacterium bovis"; ; rdfs:label "Lachnobacterium bovis" . a owl:Class; rdfs:subClassOf ; "Flintibacter butyricus"; ; rdfs:label "Flintibacter butyricus" . a owl:Class; rdfs:subClassOf ; "Fretibacterium"; ; rdfs:label "Fretibacterium" . a owl:Class; rdfs:subClassOf ; "Mesangiospermae"; ; rdfs:label "Mesangiospermae" . a owl:Class; rdfs:subClassOf ; "Pentapetalae"; ; rdfs:label "Pentapetalae" . a owl:Class; rdfs:subClassOf ; "Saccharomycotina"; "budding yeasts & allies", "true yeasts"; ; rdfs:label "Saccharomycotina" . a owl:Class; rdfs:subClassOf ; "Clostridium"; ; rdfs:label "Clostridium" . a owl:Class; rdfs:subClassOf ; "Clostridioides difficile"; ; rdfs:label "Clostridioides difficile" . a owl:Class; rdfs:subClassOf ; "Shewanella livingstonensis"; ; rdfs:label "Shewanella livingstonensis" . a owl:Class; rdfs:subClassOf , _:42bac0; "Clostridium perfringens"; ; rdfs:label "Clostridium perfringens" . _:42bac0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf ; "Anoxybacillus"; ; rdfs:label "Anoxybacillus" . a owl:Class; rdfs:subClassOf ; "Lachnoclostridium"; ; rdfs:label "Lachnoclostridium" . a owl:Class; rdfs:subClassOf ; "Enterocloster clostridioformis"; ; rdfs:label "Enterocloster clostridioformis" . a owl:Class; rdfs:subClassOf ; "Fusobacterium vincentii"; "Fusibacterium nucleatum subsp. fusiforme", "Fusibacterium nucleatum subsp. vincentii"; ; rdfs:label "Fusobacterium vincentii" . a owl:Class; rdfs:subClassOf ; "Dysgonomonas"; ; rdfs:label "Dysgonomonas" . a owl:Class; rdfs:subClassOf , _:42bad0; "Treponema"; ; rdfs:label "Treponema" . _:42bad0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf ; "Peptoniphilaceae"; ; rdfs:label "Peptoniphilaceae" . a owl:Class; rdfs:subClassOf , , _:42bae0; "Lactobacillus"; ; rdfs:label "Lactobacillus" . _:42bae0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf ; "Lactobacillus acidophilus"; ; rdfs:label "Lactobacillus acidophilus" . a owl:Class; rdfs:subClassOf ; rdfs:label "Treponema denticola"@en . a owl:Class; rdfs:subClassOf ; "Lacticaseibacillus casei"; ; rdfs:label "Lacticaseibacillus casei" . a owl:Class; rdfs:subClassOf ; "Fusobacterium hwasookii"; ; rdfs:label "Fusobacterium hwasookii" . a owl:Class; rdfs:subClassOf ; "Megamonas"; ; rdfs:label "Megamonas" . a owl:Class; rdfs:subClassOf , _:42baf0; "Megamonas hypermegale"; ; rdfs:label "Megamonas hypermegale" . _:42baf0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:42bb00; "Lactobacillus sp."; ; rdfs:label "Lactobacillus sp." . _:42bb00 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf ; "Limosilactobacillus reuteri"; ; rdfs:label "Limosilactobacillus reuteri" . a owl:Class; rdfs:subClassOf ; "Limosilactobacillus fermentum"; ; rdfs:label "Limosilactobacillus fermentum" . a owl:Class; rdfs:subClassOf ; "Ligilactobacillus murinus"; ; rdfs:label "Ligilactobacillus murinus" . a owl:Class; rdfs:subClassOf ; "Peptoniphilus"; ; rdfs:label "Peptoniphilus" . a owl:Class; rdfs:subClassOf , _:42bb10; "Ligilactobacillus salivarius"; ; rdfs:label "Ligilactobacillus salivarius" . _:42bb10 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf ; "Atopobiaceae"; ; rdfs:label "Atopobiaceae" . a owl:Class; rdfs:subClassOf ; "Eggerthellaceae"; ; rdfs:label "Eggerthellaceae" . a owl:Class; rdfs:subClassOf ; "Hungatella"; ; rdfs:label "Hungatella" . a owl:Class; rdfs:subClassOf , _:42bb20, _:42bb30, _:42bb40, _:42bb50; "Segatella copri"; ; rdfs:label "Segatella copri" . _:42bb20 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:42bb30 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:42bb40 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:42bb50 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf ; "Corynebacteriaceae"; "Coryneform bacteria"; ; rdfs:label "Corynebacteriaceae" . a owl:Class; rdfs:subClassOf , _:42bb60, _:42bb70; "Actinomyces"; ; rdfs:label "Actinomyces" . _:42bb60 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:42bb70 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf ; "Novosphingobium"; ; rdfs:label "Novosphingobium" . a owl:Class; rdfs:subClassOf ; "Anaerococcus"; ; rdfs:label "Anaerococcus" . a owl:Class; rdfs:subClassOf ; "Trueperella pyogenes"; ; rdfs:label "Trueperella pyogenes" . a owl:Class; rdfs:subClassOf ; "Arthrobacter"; ; rdfs:label "Arthrobacter" . a owl:Class; rdfs:subClassOf , , _:42bb80; "Bifidobacterium"; ; rdfs:label "Bifidobacterium" . _:42bb80 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:42bb90, _:42bba0; "Bifidobacterium bifidum"; ; rdfs:label "Bifidobacterium bifidum" . _:42bb90 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:42bba0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf ; "Bifidobacterium breve"; ; rdfs:label "Bifidobacterium breve" . a owl:Class; rdfs:subClassOf ; "Fenollaria"; ; rdfs:label "Fenollaria" . a owl:Class; rdfs:subClassOf , _:42bbb0; "Bifidobacterium dentium"; ; rdfs:label "Bifidobacterium dentium" . _:42bbb0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf ; "Leptospiraceae"; ; rdfs:label "Leptospiraceae" . a owl:Class; rdfs:subClassOf ; "Bacteroidales"; ; rdfs:label "Bacteroidales" . a owl:Class; rdfs:subClassOf ; "Rikenellaceae"; ; rdfs:label "Rikenellaceae" . a owl:Class; rdfs:subClassOf ; "Porphyromonadaceae"; ; rdfs:label "Porphyromonadaceae" . a owl:Class; rdfs:subClassOf , _:42bbc0; "Prevotellaceae"; ; rdfs:label "Prevotellaceae" . _:42bbc0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf ; "Corynebacterium"; ; rdfs:label "Corynebacterium" . a owl:Class; rdfs:subClassOf ; "Corynebacterium diphtheriae"; ; rdfs:label "Corynebacterium diphtheriae" . a owl:Class; rdfs:subClassOf ; "Corynebacterium sp."; ; rdfs:label "Corynebacterium sp." . a owl:Class; rdfs:subClassOf ; "Eisenbergiella massiliensis"; ; rdfs:label "Eisenbergiella massiliensis" . a owl:Class; rdfs:subClassOf , _:42bbd0; "Rothia aeria"; ; rdfs:label "Rothia aeria" . _:42bbd0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf ; "Fenollaria timonensis"; ; rdfs:label "Fenollaria timonensis" . a owl:Class; rdfs:subClassOf ; "Victivallis"; ; rdfs:label "Victivallis" . a owl:Class; rdfs:subClassOf ; "Eubacterium"; ; rdfs:label "Eubacterium" . a owl:Class; rdfs:subClassOf ; "Propionibacterium"; "Propionicibacterium"; ; rdfs:label "Propionibacterium" . a owl:Class; rdfs:subClassOf ; "Actinomycetes"; "high G+C Gram-positive bacteria"; ; rdfs:label "Actinomycetes" . a owl:Class; rdfs:subClassOf ; "Mycobacterium"; ; rdfs:label "Mycobacterium" . a owl:Class; rdfs:subClassOf ; "Mycobacterium avium"; ; rdfs:label "Mycobacterium avium" . a owl:Class; rdfs:subClassOf ; "Agathobacter"; ; rdfs:label "Agathobacter" . a owl:Class; rdfs:subClassOf ; "Sellimonas"; ; rdfs:label "Sellimonas" . a owl:Class; rdfs:subClassOf ; "Romboutsia timonensis"; ; rdfs:label "Romboutsia timonensis" . a owl:Class; rdfs:subClassOf ; "PVC group"; ; rdfs:label "PVC group" . a owl:Class; rdfs:subClassOf ; "Bacillati"; "Terrabacteria group"; ; rdfs:label "Bacillati" . a owl:Class; rdfs:subClassOf ; "Christensenella timonensis"; ; rdfs:label "Christensenella timonensis" . a owl:Class; rdfs:subClassOf ; "Rhodococcus "; "Rhodococcus"; ; rdfs:label "Rhodococcus " . a owl:Class; rdfs:subClassOf ; "Deinococcaceae"; ; rdfs:label "Deinococcaceae" . a owl:Class; rdfs:subClassOf ; "Nocardioides"; ; rdfs:label "Nocardioides" . a owl:Class; rdfs:subClassOf ; "Selenomonadaceae"; ; rdfs:label "Selenomonadaceae" . a owl:Class; rdfs:subClassOf , _:42bbe0; rdfs:label "Pseudonocardia"@en . _:42bbe0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf ; "Odoribacteraceae"; ; rdfs:label "Odoribacteraceae" . a owl:Class; rdfs:subClassOf ; "[Candida] sp."; "Candida sp. (Debaryomycetaceae)", "Candida sp. (Saccharomycetales)"; ; rdfs:label "[Candida] sp." . a owl:Class; rdfs:subClassOf ; "Microvirga"; ; rdfs:label "Microvirga" . a owl:Class; rdfs:subClassOf , _:42bbf0; "Clostridia"; ; rdfs:label "Clostridia" . _:42bbf0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf ; "Eubacteriales"; ; rdfs:label "Eubacteriales" . a owl:Class; rdfs:subClassOf ; "Lachnospiraceae"; ; rdfs:label "Lachnospiraceae" . a owl:Class; rdfs:subClassOf ; "Peptostreptococcaceae"; ; rdfs:label "Peptostreptococcaceae" . a owl:Class; rdfs:subClassOf ; "Eubacteriaceae"; ; rdfs:label "Eubacteriaceae" . a owl:Class; rdfs:subClassOf ; "Bacillaceae"; ; rdfs:label "Bacillaceae" . a owl:Class; rdfs:subClassOf ; "Paenibacillaceae"; ; rdfs:label "Paenibacillaceae" . a owl:Class; rdfs:subClassOf ; "Thermoactinomycetaceae"; ; rdfs:label "Thermoactinomycetaceae" . a owl:Class; rdfs:subClassOf ; "Lactobacillales"; ; rdfs:label "Lactobacillales" . a owl:Class; rdfs:subClassOf ; "Aerococcaceae"; ; rdfs:label "Aerococcaceae" . a owl:Class; rdfs:subClassOf , _:42bc00; "Atopobium sp."; ; rdfs:label "Atopobium sp." . _:42bc00 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf ; "Dorea"; ; rdfs:label "Dorea" . a owl:Class; rdfs:subClassOf ; "Subdoligranulum sp. 60_17"; ; rdfs:label "Subdoligranulum sp. 60_17" . a owl:Class; rdfs:subClassOf , _:42bc10; "Lachnospiraceae bacterium"; ; rdfs:label "Lachnospiraceae bacterium" . _:42bc10 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf ; "Yersiniaceae"; ; rdfs:label "Yersiniaceae" . a owl:Class; rdfs:subClassOf ; "Morganellaceae"; ; rdfs:label "Morganellaceae" . a owl:Class; rdfs:subClassOf ; "Ruthenibacterium"; ; rdfs:label "Ruthenibacterium" . a owl:Class; rdfs:subClassOf ; "Paraglaciecola sp."; ; rdfs:label "Paraglaciecola sp." . a owl:Class; rdfs:subClassOf , _:42bc20; "Neisseria sp."; ; rdfs:label "Neisseria sp." . _:42bc20 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf ; "Campylobacter"; ; rdfs:label "Campylobacter" . a owl:Class; rdfs:subClassOf ; "Desulfovibrionaceae"; ; rdfs:label "Desulfovibrionaceae" . a owl:Class; rdfs:subClassOf ; "Tannerella"; ; rdfs:label "Tannerella" . a owl:Class; rdfs:subClassOf ; "Nannocystis sp."; ; rdfs:label "Nannocystis sp." . a owl:Class; rdfs:subClassOf ; "Campylobacter jejuni"; ; rdfs:label "Campylobacter jejuni" . a owl:Class; rdfs:subClassOf ; "Pancrustacea"; ; rdfs:label "Pancrustacea" . a owl:Class; rdfs:subClassOf ; "Faecalibacillus intestinalis"; ; rdfs:label "Faecalibacillus intestinalis" . a owl:Class; rdfs:subClassOf , _:42bc30; "Bacteria"; "bacteria", "eubacteria"; , ; rdfs:label "Bacteria" . _:42bc30 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf ; "Barnesiellaceae"; ; rdfs:label "Barnesiellaceae" . a owl:Class; rdfs:subClassOf ; "Tannerellaceae"; ; rdfs:label "Tannerellaceae" . a owl:Class; rdfs:subClassOf ; "Bacteroidia"; ; rdfs:label "Bacteroidia" . a owl:Class; rdfs:subClassOf ; "Crenothrix"; ; rdfs:label "Crenothrix" . a owl:Class; rdfs:subClassOf ; rdfs:label "Chloroflexi"@en . a owl:Class; rdfs:subClassOf ; "Thermodesulfobacteriota"; ; rdfs:label "Thermodesulfobacteriota" . a owl:Class; rdfs:subClassOf , _:42bc40; "Actinomycetota"; "actinobacteria"; ; rdfs:label "Actinomycetota" . _:42bc40 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf ; "Thermoactinomyces"; ; rdfs:label "Thermoactinomyces" . a owl:Class; rdfs:subClassOf ; "Fusobacteriales"; ; rdfs:label "Fusobacteriales" . a owl:Class; rdfs:subClassOf ; "Fusobacteriaceae"; ; rdfs:label "Fusobacteriaceae" . a owl:Class; rdfs:subClassOf ; "Planctomycetota"; "Planctomycetes"; ; rdfs:label "Planctomycetota" . a owl:Class; rdfs:subClassOf ; "Spirochaetota"; ; rdfs:label "Spirochaetota" . a owl:Class; rdfs:subClassOf ; "Spirochaetia"; ; rdfs:label "Spirochaetia" . a owl:Class; rdfs:subClassOf ; "Phocaeicola massiliensis"; ; rdfs:label "Phocaeicola massiliensis" . a owl:Class; rdfs:subClassOf ; "Agathobaculum"; ; rdfs:label "Agathobaculum" . a owl:Class; rdfs:subClassOf ; "Actinomycetaceae"; ; rdfs:label "Actinomycetaceae" . a owl:Class; rdfs:subClassOf ; "Pseudonocardiaceae"; ; rdfs:label "Pseudonocardiaceae" . a owl:Class; rdfs:subClassOf ; "Anaerostipes"; ; rdfs:label "Anaerostipes" . a owl:Class; rdfs:subClassOf ; "Helicobacter"; ; rdfs:label "Helicobacter" . a owl:Class; rdfs:subClassOf ; "Dysosmobacter welbionis"; ; rdfs:label "Dysosmobacter welbionis" . a owl:Class; rdfs:subClassOf ; "Helicobacter pylori"; ; rdfs:label "Helicobacter pylori" . a owl:Class; rdfs:subClassOf ; "Mycoplasmopsis fermentans"; ; rdfs:label "Mycoplasmopsis fermentans" . a owl:Class; rdfs:subClassOf ; "Desulfobacterales"; ; rdfs:label "Desulfobacterales" . a owl:Class; rdfs:subClassOf ; "Desulfobulbaceae"; ; rdfs:label "Desulfobulbaceae" . a owl:Class; rdfs:subClassOf ; "Campylobacterales"; ; rdfs:label "Campylobacterales" . a owl:Class; rdfs:subClassOf ; "Alistipes finegoldii"; ; rdfs:label "Alistipes finegoldii" . a owl:Class; rdfs:subClassOf ; "Archaea"; , ; rdfs:label "Archaea" . a owl:Class; rdfs:subClassOf ; "Oscillospiraceae"; ; rdfs:label "Oscillospiraceae" . a owl:Class; rdfs:subClassOf ; "Bifidobacterium longum"; ; rdfs:label "Bifidobacterium longum" . a owl:Class; rdfs:subClassOf , , _:42bc50, _:42bc60; "Faecalibacterium"; ; rdfs:label "Faecalibacterium" . _:42bc50 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:42bc60 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf ; "Lawsonibacter"; ; rdfs:label "Lawsonibacter" . a owl:Class; rdfs:subClassOf ; "Dialister invisus"; ; rdfs:label "Dialister invisus" . a owl:Class; rdfs:subClassOf , , _:42bc70; "Moniliophthora"; ; rdfs:label "Moniliophthora" . _:42bc70 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf ; "Bacteroidaceae bacterium"; ; rdfs:label "Bacteroidaceae bacterium" . a owl:Class; rdfs:subClassOf ; "Mediterraneibacter"; ; rdfs:label "Mediterraneibacter" . a owl:Class; rdfs:subClassOf ; "Candidatus Portiera"; "Portiera", "whitefly endosymbionts"; ; rdfs:label "Candidatus Portiera" . a owl:Class; rdfs:subClassOf ; "Alistipes"; ; rdfs:label "Alistipes" . a owl:Class; rdfs:subClassOf , , _:42bc80; "Akkermansia"; ; rdfs:label "Akkermansia" . _:42bc80 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:42bc90; "Akkermansia muciniphila"; ; rdfs:label "Akkermansia muciniphila" . _:42bc90 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf ; "Gordonia insulae"; ; rdfs:label "Gordonia insulae" . a owl:Class; rdfs:subClassOf ; "Anaerotruncus"; ; rdfs:label "Anaerotruncus" . a owl:Class; rdfs:subClassOf ; "Prevotella intermedia 17"; "Prevotella intermedia str. 17"; ; rdfs:label "Prevotella intermedia 17" . a owl:Class; rdfs:subClassOf ; "Riboviria"; "RNA viruses", "RNA viruses and retroviruses", "RNA viruses and viroids"; ; rdfs:label "Riboviria" . a owl:Class; rdfs:subClassOf ; "Lentisphaerota"; ; rdfs:label "Lentisphaerota" . a owl:Class; rdfs:subClassOf ; "Acetanaerobacterium"; ; rdfs:label "Acetanaerobacterium" . a owl:Class; rdfs:subClassOf ; "Dysosmobacter"; ; rdfs:label "Dysosmobacter" . a owl:Class; rdfs:subClassOf ; "unclassified Clostridium"; ; rdfs:label "unclassified Clostridium" . a owl:Class; rdfs:subClassOf ; "unclassified Eubacterium (in: firmicutes)"; "unclassified Eubacterium"; ; rdfs:label "unclassified Eubacterium (in: firmicutes)" . a owl:Class; rdfs:subClassOf ; "Sulfurovum"; ; rdfs:label "Sulfurovum" . a owl:Class; rdfs:subClassOf ; "Oribacterium"; ; rdfs:label "Oribacterium" . a owl:Class; rdfs:subClassOf , _:42bca0; "Cardiobacterium"; ; rdfs:label "Cardiobacterium" . _:42bca0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf ; "Enterocloster"; ; rdfs:label "Enterocloster" . a owl:Class; rdfs:subClassOf ; "Revtraviricetes"; ; rdfs:label "Revtraviricetes" . a owl:Class; rdfs:subClassOf ; "Limosilactobacillus"; ; rdfs:label "Limosilactobacillus" . a owl:Class; rdfs:subClassOf ; "Eukaryota"; "eucaryotes", "eukaryotes"; , ; rdfs:label "Eukaryota" . a owl:Class; rdfs:subClassOf ; "Lacticaseibacillus"; ; rdfs:label "Lacticaseibacillus" . a owl:Class; rdfs:subClassOf ; "Ligilactobacillus"; ; rdfs:label "Ligilactobacillus" . a owl:Class; rdfs:subClassOf ; "Bifidobacterium animalis"; ; rdfs:label "Bifidobacterium animalis" . a owl:Class; rdfs:subClassOf ; "Lachnospira"; ; rdfs:label "Lachnospira" . a owl:Class; rdfs:subClassOf ; "Lachnospira pectinoschiza"; ; rdfs:label "Lachnospira pectinoschiza" . a owl:Class; rdfs:subClassOf ; "Coprobacillaceae"; ; rdfs:label "Coprobacillaceae" . a owl:Class; rdfs:subClassOf ; "Turicibacteraceae"; ; rdfs:label "Turicibacteraceae" . a owl:Class; rdfs:subClassOf ; "Bacteroides eggerthii"; ; rdfs:label "Bacteroides eggerthii" . a owl:Class; rdfs:subClassOf , _:42bcb0; "Tannerella forsythia"; ; rdfs:label "Tannerella forsythia" . _:42bcb0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf ; "Bacteroides ovatus"; ; rdfs:label "Bacteroides ovatus" . a owl:Class; rdfs:subClassOf ; "Alistipes putredinis"; ; rdfs:label "Alistipes putredinis" . a owl:Class; rdfs:subClassOf , _:42bcc0; "Prevotella intermedia"; ; rdfs:label "Prevotella intermedia" . _:42bcc0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf ; "Segatella oris"; ; rdfs:label "Segatella oris" . a owl:Class; rdfs:subClassOf ; rdfs:label "Prevotella oulorum"@en . a owl:Class; rdfs:subClassOf ; "Alphaproteobacteria"; "a-proteobacteria"; ; rdfs:label "Alphaproteobacteria" . a owl:Class; rdfs:subClassOf ; "Betaproteobacteria"; "b-proteobacteria"; ; rdfs:label "Betaproteobacteria" . a owl:Class; rdfs:subClassOf ; "Comamonas"; "Comimonas"; ; rdfs:label "Comamonas" . a owl:Class; rdfs:subClassOf ; "Odoribacter"; ; rdfs:label "Odoribacter" . a owl:Class; rdfs:subClassOf ; "Pseudomonas"; "RNA similarity group I"; ; rdfs:label "Pseudomonas" . a owl:Class; rdfs:subClassOf ; "Pseudomonas aeruginosa"; ; rdfs:label "Pseudomonas aeruginosa" . a owl:Class; rdfs:subClassOf ; "Arsenophonus apicola"; ; rdfs:label "Arsenophonus apicola" . a owl:Class; rdfs:subClassOf ; "Salmonella enterica"; ; rdfs:label "Salmonella enterica" . a owl:Class; rdfs:subClassOf ; "Pontibacillus"; ; rdfs:label "Pontibacillus" . a owl:Class; rdfs:subClassOf ; "Bacteroides helcogenes"; ; rdfs:label "Bacteroides helcogenes" . a owl:Class; rdfs:subClassOf ; rdfs:label "Anaerolineae"@en . a owl:Class; rdfs:subClassOf ; rdfs:label "Anaerolineaceae"@en . a owl:Class; rdfs:subClassOf ; "Anaerolineales"; ; rdfs:label "Anaerolineales" . a owl:Class; rdfs:subClassOf ; "Subdoligranulum"; ; rdfs:label "Subdoligranulum" . a owl:Class; rdfs:subClassOf ; "[Clostridium] scindens"; "Clostridium scindens TSDC17.2-1.1"; ; rdfs:label "[Clostridium] scindens" . a owl:Class; rdfs:subClassOf , _:42bcd0, _:42bce0; "Veillonella"; ; rdfs:label "Veillonella" . _:42bcd0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:42bce0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:42bcf0, _:42bd00; "Bacteroides sp."; ; rdfs:label "Bacteroides sp." . _:42bcf0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:42bd00 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf ; "Campylobacterota"; "e-proteobacteria"; ; rdfs:label "Campylobacterota" . a owl:Class; rdfs:subClassOf ; "Segatella"; ; rdfs:label "Segatella" . a owl:Class; rdfs:subClassOf ; "Roseburia hominis"; ; rdfs:label "Roseburia hominis" . a owl:Class; rdfs:subClassOf ; "Thomasclavelia"; ; rdfs:label "Thomasclavelia" . a owl:Class; rdfs:subClassOf ; "Bifidobacterium animalis subsp. lactis"; ; rdfs:label "Bifidobacterium animalis subsp. lactis" . a owl:Class; rdfs:subClassOf ; "Hepacivirus hominis"; "Hepacivirus C", "Hepatitis C virus", "hepatitis C virus HCV", "human hepatitis C virus", "human hepatitis C virus HCV", "human hepatitis virus C HCV", "post-transfusion hepatitis non A non B virus"; ; rdfs:label "Hepacivirus hominis" . a owl:Class; rdfs:subClassOf ; "Clostridium sp. cp01.19"; ; rdfs:label "Clostridium sp. cp01.19" . a owl:Class; rdfs:subClassOf ; "Pseudomonas sp."; ; rdfs:label "Pseudomonas sp." . a owl:Class; rdfs:subClassOf ; "Peptostreptococcales"; ; rdfs:label "Peptostreptococcales" . a owl:Class; rdfs:subClassOf ; "Butyricicoccaceae"; ; rdfs:label "Butyricicoccaceae" . a owl:Class; rdfs:subClassOf ; "Phocaeicola plebeius"; ; rdfs:label "Phocaeicola plebeius" . a owl:Class; rdfs:subClassOf ; "Phocaeicola coprocola"; ; rdfs:label "Phocaeicola coprocola" . a owl:Class; rdfs:subClassOf ; "Euarchontoglires"; ; rdfs:label "Euarchontoglires" . a owl:Class; rdfs:subClassOf ; "Streptococcus gallolyticus"; ; rdfs:label "Streptococcus gallolyticus" . a owl:Class; rdfs:subClassOf ; "Bifidobacteriaceae"; ; rdfs:label "Bifidobacteriaceae" . a owl:Class; rdfs:subClassOf ; "Propionibacteriaceae"; "Propionicibacteriaceae"; ; rdfs:label "Propionibacteriaceae" . a owl:Class; rdfs:subClassOf ; "Mollicutes"; "mycoplasmas"; ; rdfs:label "Mollicutes" . a owl:Class; rdfs:subClassOf ; "Veillonellaceae"; ; rdfs:label "Veillonellaceae" . a owl:Class; rdfs:subClassOf ; "Clostridiaceae"; ; rdfs:label "Clostridiaceae" . a owl:Class; rdfs:subClassOf , _:42bd10; "Burkholderia"; ; rdfs:label "Burkholderia" . _:42bd10 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf ; "Helicobacter hepaticus"; ; rdfs:label "Helicobacter hepaticus" . a owl:Class; rdfs:subClassOf , _:42bd20; "Pseudomonadota incertae sedis"; ; rdfs:label "Pseudomonadota incertae sedis" . _:42bd20 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf ; "Fusobacteriota"; ; rdfs:label "Fusobacteriota" . a owl:Class; rdfs:subClassOf ; "Leptotrichia"; ; rdfs:label "Leptotrichia" . a owl:Class; rdfs:subClassOf ; "Leptonema "; "Leptonema"; ; rdfs:label "Leptonema " . a owl:Class; rdfs:subClassOf ; "Rothia "; "Rothia"; ; rdfs:label "Rothia " . a owl:Class; rdfs:subClassOf , _:42bd30; "Kingella "; "Kingella"; ; rdfs:label "Kingella " . _:42bd30 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf ; "Tetrapoda"; "tetrapods"; ; rdfs:label "Tetrapoda" . a owl:Class; rdfs:subClassOf ; "Amniota"; "amniotes"; ; rdfs:label "Amniota" . a owl:Class; rdfs:subClassOf ; "Parabacteroides goldsteinii"; ; rdfs:label "Parabacteroides goldsteinii" . a owl:Class; rdfs:subClassOf ; "Alistipes onderdonkii"; ; rdfs:label "Alistipes onderdonkii" . a owl:Class; rdfs:subClassOf ; "Bacteroides intestinalis"; ; rdfs:label "Bacteroides intestinalis" . a owl:Class; rdfs:subClassOf ; "Phascolarctobacterium"; ; rdfs:label "Phascolarctobacterium" . a owl:Class; rdfs:subClassOf ; "Phascolarctobacterium faecium"; ; rdfs:label "Phascolarctobacterium faecium" . a owl:Class; rdfs:subClassOf ; "Parvimonas micra"; ; rdfs:label "Parvimonas micra" . a owl:Class; rdfs:subClassOf , _:42bd40; "Blautia producta"; ; rdfs:label "Blautia producta" . _:42bd40 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf ; "[Ruminococcus] torques"; ; rdfs:label "[Ruminococcus] torques" . a owl:Class; rdfs:subClassOf ; "Coprococcus"; ; rdfs:label "Coprococcus" . a owl:Class; rdfs:subClassOf ; "Thauera"; ; rdfs:label "Thauera" . a owl:Class; rdfs:subClassOf ; "Viridiplantae"; "Chlorophyta/Embryophyta group", "chlorophyte/embryophyte group", "green plants"; , ; rdfs:label "Viridiplantae" . a owl:Class; rdfs:subClassOf ; "Opisthokonta"; ; rdfs:label "Opisthokonta" . a owl:Class; rdfs:subClassOf ; "Bilateria"; ; rdfs:label "Bilateria" . a owl:Class; rdfs:subClassOf , _:42bd50; "Enterocloster asparagiformis"; ; rdfs:label "Enterocloster asparagiformis" . _:42bd50 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf ; "Pseudomonadati"; ; rdfs:label "Pseudomonadati" . a owl:Class; rdfs:subClassOf ; "Bacteroides finegoldii"; ; rdfs:label "Bacteroides finegoldii" . a owl:Class; rdfs:subClassOf ; "Thermotogati"; ; rdfs:label "Thermotogati" . a owl:Class; rdfs:subClassOf ; "Coriobacterium"; ; rdfs:label "Coriobacterium" . a owl:Class; rdfs:subClassOf ; "Agromyces"; ; rdfs:label "Agromyces" . a owl:Class; rdfs:subClassOf ; "Microbacterium"; "Aureibacterium"; ; rdfs:label "Microbacterium" . a owl:Class; rdfs:subClassOf ; "Lactobacillaceae"; ; rdfs:label "Lactobacillaceae" . a owl:Class; rdfs:subClassOf ; "Streptobacillus"; ; rdfs:label "Streptobacillus" . a owl:Class; rdfs:subClassOf ; "Peptostreptococcus stomatis"; ; rdfs:label "Peptostreptococcus stomatis" . a owl:Class; rdfs:subClassOf ; "Akkermansia muciniphila ATCC BAA-835"; "Akkermansia muciniphila str. ATCC BAA-835", "Akkermansia muciniphila strain ATCC BAA-835"; ; rdfs:label "Akkermansia muciniphila ATCC BAA-835" . a owl:Class; rdfs:subClassOf ; "Hyphomicrobiales"; ; rdfs:label "Hyphomicrobiales" . a owl:Class; rdfs:subClassOf ; "Phocaeicola dorei"; ; rdfs:label "Phocaeicola dorei" . a owl:Class; rdfs:subClassOf ; "Enterococcus sp."; ; rdfs:label "Enterococcus sp." . a owl:Class; rdfs:subClassOf ; "Bilophila"; ; rdfs:label "Bilophila" . a owl:Class; rdfs:subClassOf ; "Bilophila wadsworthia"; ; rdfs:label "Bilophila wadsworthia" . a owl:Class; rdfs:subClassOf ; "Enterocloster aldenensis"; ; rdfs:label "Enterocloster aldenensis" . a owl:Class; rdfs:subClassOf ; "Enterocloster citroniae"; ; rdfs:label "Enterocloster citroniae" . a owl:Class; rdfs:subClassOf ; "Roseburia inulinivorans"; ; rdfs:label "Roseburia inulinivorans" . a owl:Class; rdfs:subClassOf ; "Leyella stercorea"; ; rdfs:label "Leyella stercorea" . a owl:Class; rdfs:subClassOf ; "Streptococcus sp. 'group A'"; ; rdfs:label "Streptococcus sp. 'group A'" . a owl:Class; rdfs:subClassOf ; "Bifidobacterium adolescentis ATCC 15703"; "Bifidobacterium adolescentis str. ATCC 15703", "Bifidobacterium adolescentis strain ATCC 15703"; ; rdfs:label "Bifidobacterium adolescentis ATCC 15703" . a owl:Class; rdfs:subClassOf ; "Arabidopsis thaliana"; "mouse-ear cress", "thale cress", "thale-cress"; ; rdfs:label "Arabidopsis thaliana" . a owl:Class; rdfs:subClassOf ; "Bacteroides xylanisolvens"; ; rdfs:label "Bacteroides xylanisolvens" . a owl:Class; rdfs:subClassOf ; "Parabacteroides"; ; rdfs:label "Parabacteroides" . a owl:Class; rdfs:subClassOf ; "Amycolatopsis sp."; ; rdfs:label "Amycolatopsis sp." . a owl:Class; rdfs:subClassOf , _:42bd60; "Escherichia coli B"; ; rdfs:label "Escherichia coli B" . _:42bd60 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf ; "Murinae"; ; rdfs:label "Murinae" . a owl:Class; rdfs:subClassOf ; "Dorea formicigenerans"; ; rdfs:label "Dorea formicigenerans" . a owl:Class; rdfs:subClassOf ; "Anaerobutyricum hallii"; ; rdfs:label "Anaerobutyricum hallii" . a owl:Class; rdfs:subClassOf ; "Agathobacter rectalis"; ; rdfs:label "Agathobacter rectalis" . a owl:Class; rdfs:subClassOf ; "Eubacterium ventriosum"; ; rdfs:label "Eubacterium ventriosum" . a owl:Class; rdfs:subClassOf ; "Eubacterium xylanophilum"; ; rdfs:label "Eubacterium xylanophilum" . a owl:Class; rdfs:subClassOf ; "Barnesiella"; ; rdfs:label "Barnesiella" . a owl:Class; rdfs:subClassOf ; "Dialister"; ; rdfs:label "Dialister" . a owl:Class; rdfs:subClassOf ; "Dialister pneumosintes"; ; rdfs:label "Dialister pneumosintes" . a owl:Class; rdfs:subClassOf ; "Stenotrophomonas maltophilia"; ; rdfs:label "Stenotrophomonas maltophilia" . a owl:Class; rdfs:subClassOf ; "Howardella"; ; rdfs:label "Howardella" . a owl:Class; rdfs:subClassOf ; "Blautia obeum"; ; rdfs:label "Blautia obeum" . a owl:Class; rdfs:subClassOf ; "Sutterella"; ; rdfs:label "Sutterella" . a owl:Class; rdfs:subClassOf , _:42bd70; "Sutterella wadsworthensis"; ; rdfs:label "Sutterella wadsworthensis" . _:42bd70 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf ; "Mammalia"; "mammals"; ; rdfs:label "Mammalia" . a owl:Class; rdfs:subClassOf , _:42bd80; rdfs:label "Methylobacterium"@en . _:42bd80 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf ; rdfs:label "Prevotella pleuritidis"@en . a owl:Class; rdfs:subClassOf ; "Leptospira kmetyi"; ; rdfs:label "Leptospira kmetyi" . a owl:Class; rdfs:subClassOf ; "Flavonifractor plautii ATCC 29863"; "Flavonifractor plautii str. ATCC 29863", "Flavonifractor plautii strain ATCC 29863"; ; rdfs:label "Flavonifractor plautii ATCC 29863" . a owl:Class; rdfs:subClassOf ; "Bifidobacterium sp."; ; rdfs:label "Bifidobacterium sp." . a owl:Class; rdfs:subClassOf ; "Sphingomonadaceae"; "Sphingomonas group", "Zymomonas group", "alpha-4 proteobacteria"; ; rdfs:label "Sphingomonadaceae" . a owl:Class; rdfs:subClassOf ; "Cronobacter"; ; rdfs:label "Cronobacter" . a owl:Class; rdfs:subClassOf , _:42bd90; "Aggregatibacter"; ; rdfs:label "Aggregatibacter" . _:42bd90 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf ; "Blautia wexlerae"; ; rdfs:label "Blautia wexlerae" . a owl:Class; rdfs:subClassOf ; "Ruminococcus sp."; ; rdfs:label "Ruminococcus sp." . a owl:Class; rdfs:subClassOf ; "Megamonas funiformis"; ; rdfs:label "Megamonas funiformis" . a owl:Class; rdfs:subClassOf ; "Catonella"; ; rdfs:label "Catonella" . a owl:Class; rdfs:subClassOf ; "Filifactor"; ; rdfs:label "Filifactor" . a owl:Class; rdfs:subClassOf ; "Dictyostelium discoideum"; ; rdfs:label "Dictyostelium discoideum" . a owl:Class; rdfs:subClassOf ; "Adlercreutzia"; ; rdfs:label "Adlercreutzia" . a owl:Class; rdfs:subClassOf ; "Eleutherodactylus lentus"; "Virgin Islands robber frog"; ; rdfs:label "Eleutherodactylus lentus" . a owl:Class; rdfs:subClassOf ; "Dikarya"; ; rdfs:label "Dikarya" . a owl:Class; rdfs:subClassOf ; "Vibrio scophthalmi"; ; rdfs:label "Vibrio scophthalmi" . a owl:Class; rdfs:subClassOf ; "Oscillibacter"; ; rdfs:label "Oscillibacter" . a owl:Class; rdfs:subClassOf ; "Abiotrophia"; ; rdfs:label "Abiotrophia" . a owl:Class; rdfs:subClassOf ; "Pseudobutyrivibrio"; ; rdfs:label "Pseudobutyrivibrio" . a owl:Class; rdfs:subClassOf ; "Pseudobutyrivibrio ruminis"; ; rdfs:label "Pseudobutyrivibrio ruminis" . a owl:Class; rdfs:subClassOf ; "[Ruminococcus] lactaris"; ; rdfs:label "[Ruminococcus] lactaris" . a owl:Class; rdfs:subClassOf ; "Weissella"; ; rdfs:label "Weissella" . a owl:Class; rdfs:subClassOf ; "coliform bacterium 3-80"; ; rdfs:label "coliform bacterium 3-80" . a owl:Class; rdfs:subClassOf ; "Bacteroides stercoris"; ; rdfs:label "Bacteroides stercoris" . a owl:Class; rdfs:subClassOf ; "Moraxellaceae"; ; rdfs:label "Moraxellaceae" . a owl:Class; rdfs:subClassOf ; "Acinetobacter"; ; rdfs:label "Acinetobacter" . a owl:Class; rdfs:subClassOf ; "Acinetobacter baumannii"; ; rdfs:label "Acinetobacter baumannii" . a owl:Class; rdfs:subClassOf , _:42bda0; "Gordonibacter pamelaeae"; ; rdfs:label "Gordonibacter pamelaeae" . _:42bda0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf ; "Acinetobacter sp."; ; rdfs:label "Acinetobacter sp." . a owl:Class; rdfs:subClassOf , _:42bdb0; "Natronobacillus"; ; rdfs:label "Natronobacillus" . _:42bdb0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf ; "Moraxella"; ; rdfs:label "Moraxella" . a owl:Class; rdfs:subClassOf ; "Fungi"; , ; rdfs:label "Fungi" . a owl:Class; rdfs:subClassOf ; "Bacteroides caccae"; ; rdfs:label "Bacteroides caccae" . a owl:Class; rdfs:subClassOf ; "Lacticaseibacillus rhamnosus"; ; rdfs:label "Lacticaseibacillus rhamnosus" . a owl:Class; rdfs:subClassOf ; "Moraxella catarrhalis"; ; rdfs:label "Moraxella catarrhalis" . a owl:Class; rdfs:subClassOf ; "Neisseriaceae"; ; rdfs:label "Neisseriaceae" . a owl:Class; rdfs:subClassOf ; "Neisseria"; ; rdfs:label "Neisseria" . a owl:Class; rdfs:subClassOf ; "Neisseria flavescens"; ; rdfs:label "Neisseria flavescens" . a owl:Class; rdfs:subClassOf ; "Barnesiella intestinihominis"; ; rdfs:label "Barnesiella intestinihominis" . a owl:Class; rdfs:subClassOf ; "Ascomycota"; "ascomycete fungi", "sac fungi"; ; rdfs:label "Ascomycota" . a owl:Class; rdfs:subClassOf ; "Saccharomycetales"; ; rdfs:label "Saccharomycetales" . a owl:Class; rdfs:subClassOf , , _:42bdc0; "Schizosaccharomyces pombe"; "fission yeast"; ; rdfs:label "Schizosaccharomyces pombe" . _:42bdc0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf ; "Saccharomyces cerevisiae"; "Saccharomyces boulardii", "Saccharomyces cerevisiae 'var. diastaticus'", "baker's yeast", "brewer's yeast"; ; rdfs:label "Saccharomyces cerevisiae" . a owl:Class; rdfs:subClassOf ; "Flavobacteriaceae"; ; rdfs:label "Flavobacteriaceae" . a owl:Class; rdfs:subClassOf ; "Psychrobacter"; ; rdfs:label "Psychrobacter" . a owl:Class; rdfs:subClassOf ; "Rothia "; "Rothia"; ; rdfs:label "Rothia " . a owl:Class; rdfs:subClassOf ; rdfs:label "Treponema maltophilum"@en . a owl:Class; rdfs:subClassOf ; "Neurospora"; ; rdfs:label "Neurospora" . a owl:Class; rdfs:subClassOf ; "Agathobacter rectalis ATCC 33656"; "Eubacterium rectale ATCC 33656"; ; rdfs:label "Agathobacter rectalis ATCC 33656" . a owl:Class; rdfs:subClassOf ; "Basidiomycota"; "basidiomycete fungi", "basidiomycetes"; ; rdfs:label "Basidiomycota" . a owl:Class; rdfs:subClassOf ; "Hallella"; ; rdfs:label "Hallella" . a owl:Class; rdfs:subClassOf ; "Erysipelotrichales"; ; rdfs:label "Erysipelotrichales" . a owl:Class; rdfs:subClassOf ; "Nakamurella"; ; rdfs:label "Nakamurella" . a owl:Class; rdfs:subClassOf , _:42bdd0; "Eikenella"; ; rdfs:label "Eikenella" . _:42bdd0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf ; "Eubacteriales incertae sedis"; ; rdfs:label "Eubacteriales incertae sedis" . a owl:Class; rdfs:subClassOf ; "Eikenella corrodens"; ; rdfs:label "Eikenella corrodens" . a owl:Class; rdfs:subClassOf ; "Enterobacteriaceae"; "enterobacteria"; ; rdfs:label "Enterobacteriaceae" . a owl:Class; rdfs:subClassOf ; "Parvimonas"; ; rdfs:label "Parvimonas" . a owl:Class; rdfs:subClassOf ; "Anaerovoracaceae"; "Clostridiales Family XIII. Incertae Sedis"; ; rdfs:label "Anaerovoracaceae" . a owl:Class; rdfs:subClassOf ; "Citrobacter"; ; rdfs:label "Citrobacter" . a owl:Class; rdfs:subClassOf ; "Mycoplasmatota"; "Tenericutes"; ; rdfs:label "Mycoplasmatota" . a owl:Class; rdfs:subClassOf ; "Enterobacter"; ; rdfs:label "Enterobacter" . a owl:Class; rdfs:subClassOf ; "Candida"; ; rdfs:label "Candida" . a owl:Class; rdfs:subClassOf ; "Candida albicans"; ; rdfs:label "Candida albicans" . a owl:Class; rdfs:subClassOf ; "Klebsiella aerogenes"; ; rdfs:label "Klebsiella aerogenes" . a owl:Class; rdfs:subClassOf ; "Diutina rugosa"; ; rdfs:label "Diutina rugosa" . a owl:Class; rdfs:subClassOf , , _:42bde0; "Malassezia"; ; rdfs:label "Malassezia" . _:42bde0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf ; "Malassezia furfur"; "Pityriasis (Tinea) versicolor infection agent"; ; rdfs:label "Malassezia furfur" . a owl:Class; rdfs:subClassOf ; "Prevotella melaninogenica ATCC 25845"; "Prevotella melaninogenica str. ATCC 25845", "Prevotella melaninogenica strain ATCC 25845"; ; rdfs:label "Prevotella melaninogenica ATCC 25845" . a owl:Class; rdfs:subClassOf ; "Asaccharobacter"; ; rdfs:label "Asaccharobacter" . a owl:Class; rdfs:subClassOf , _:42bdf0; "Escherichia"; ; rdfs:label "Escherichia" . _:42bdf0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:42be00, _:42be10; "Escherichia coli"; "E. coli", "Escherichia/Shigella coli"; ; rdfs:label "Escherichia coli" . _:42be00 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:42be10 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf ; "Klebsiella"; ; rdfs:label "Klebsiella" . a owl:Class; rdfs:subClassOf ; "Blautia"; ; rdfs:label "Blautia" . a owl:Class; rdfs:subClassOf , _:42be20; "Klebsiella pneumoniae"; ; rdfs:label "Klebsiella pneumoniae" . _:42be20 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf ; "Butyricimonas"; ; rdfs:label "Butyricimonas" . a owl:Class; rdfs:subClassOf ; "Paraprevotella"; ; rdfs:label "Paraprevotella" . a owl:Class; rdfs:subClassOf ; "Parasutterella"; ; rdfs:label "Parasutterella" . a owl:Class; rdfs:subClassOf ; "Kluyvera"; ; rdfs:label "Kluyvera" . a owl:Class; rdfs:subClassOf ; "Enterorhabdus"; ; rdfs:label "Enterorhabdus" . a owl:Class; rdfs:subClassOf ; "Butyricicoccus"; ; rdfs:label "Butyricicoccus" . a owl:Class; rdfs:subClassOf , _:42be30; "Proteus mirabilis"; ; rdfs:label "Proteus mirabilis" . _:42be30 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf ; "Providencia"; ; rdfs:label "Providencia" . a owl:Class; rdfs:subClassOf ; "Robinsoniella"; ; rdfs:label "Robinsoniella" . a owl:Class; rdfs:subClassOf ; "Salmonella"; ; rdfs:label "Salmonella" . a owl:Class; rdfs:subClassOf ; "Salmonella enterica subsp. enterica"; ; rdfs:label "Salmonella enterica subsp. enterica" . a owl:Class; rdfs:subClassOf ; "Hydrogenoanaerobacterium"; ; rdfs:label "Hydrogenoanaerobacterium" . a owl:Class; rdfs:subClassOf ; "[Clostridium] saccharolyticum WM1"; ; rdfs:label "[Clostridium] saccharolyticum WM1" . a owl:Class; rdfs:subClassOf ; "Holdemania"; ; rdfs:label "Holdemania" . a owl:Class; rdfs:subClassOf ; "Serratia "; "Serratia"; ; rdfs:label "Serratia " . a owl:Class; rdfs:subClassOf ; "Shigella"; ; rdfs:label "Shigella" . a owl:Class; rdfs:subClassOf ; "Shigella dysenteriae"; "Escherichia/Shigella dysenteriae"; ; rdfs:label "Shigella dysenteriae" . a owl:Class; rdfs:subClassOf ; "Caenorhabditis elegans"; ; rdfs:label "Caenorhabditis elegans" . a owl:Class; rdfs:subClassOf ; rdfs:label "Yersinia"@en . a owl:Class; rdfs:subClassOf ; "Yersinia enterocolitica"; ; rdfs:label "Yersinia enterocolitica" . a owl:Class; rdfs:subClassOf ; "Pyramidobacter"; ; rdfs:label "Pyramidobacter" . a owl:Class; rdfs:subClassOf ; "Vibrionaceae"; ; rdfs:label "Vibrionaceae" . a owl:Class; rdfs:subClassOf ; "Aeromonas"; ; rdfs:label "Aeromonas" . a owl:Class; rdfs:subClassOf ; "Gordonibacter"; ; rdfs:label "Gordonibacter" . a owl:Class; rdfs:subClassOf ; "Anaerostipes hadrus"; ; rdfs:label "Anaerostipes hadrus" . a owl:Class; rdfs:subClassOf ; "Synergistales"; ; rdfs:label "Synergistales" . a owl:Class; rdfs:subClassOf ; rdfs:label "Fretibacterium fastidiosum"@en . a owl:Class; rdfs:subClassOf ; "Anaerosporobacter"; ; rdfs:label "Anaerosporobacter" . a owl:Class; rdfs:subClassOf ; "Acidaminobacter"; ; rdfs:label "Acidaminobacter" . a owl:Class; rdfs:subClassOf ; "Photobacterium"; ; rdfs:label "Photobacterium" . a owl:Class; rdfs:subClassOf ; "Bacteroides xylanisolvens XB1A"; "Bacteroides xylanisolvens str. XB1A", "Bacteroides xylanisolvens strain XB1A"; ; rdfs:label "Bacteroides xylanisolvens XB1A" . a owl:Class; rdfs:subClassOf ; "Perlucidibaca"; ; rdfs:label "Perlucidibaca" . a owl:Class; rdfs:subClassOf ; "Vibrio"; ; rdfs:label "Vibrio" . a owl:Class; rdfs:subClassOf ; "Daphnia"; "common water fleas"; ; rdfs:label "Daphnia" . a owl:Class; rdfs:subClassOf ; "Citrobacter farmeri"; ; rdfs:label "Citrobacter farmeri" . a owl:Class; rdfs:subClassOf ; "Citrobacter rodentium"; ; rdfs:label "Citrobacter rodentium" . a owl:Class; rdfs:subClassOf ; "Fusobacterium sp."; ; rdfs:label "Fusobacterium sp." . a owl:Class; rdfs:subClassOf ; "Oscillibacter valericigenes Sjm18-20"; ; rdfs:label "Oscillibacter valericigenes Sjm18-20" . a owl:Class; rdfs:subClassOf , _:42be40; "Escherichia coli ETEC TW03439"; ; rdfs:label "Escherichia coli ETEC TW03439" . _:42be40 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf ; "Catenisphaera adipataccumulans"; ; rdfs:label "Catenisphaera adipataccumulans" . a owl:Class; rdfs:subClassOf ; "Pasteurellaceae"; ; rdfs:label "Pasteurellaceae" . a owl:Class; rdfs:subClassOf ; "rosids"; ; rdfs:label "rosids" . a owl:Class; rdfs:subClassOf ; "Actinobacillus"; ; rdfs:label "Actinobacillus" . a owl:Class; rdfs:subClassOf ; "Aggregatibacter actinomycetemcomitans"; ; rdfs:label "Aggregatibacter actinomycetemcomitans" . a owl:Class; rdfs:subClassOf , , _:42be50; "saccharomyceta"; ; rdfs:label "saccharomyceta" . _:42be50 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf ; "leotiomyceta"; ; rdfs:label "leotiomyceta" . a owl:Class; rdfs:subClassOf ; "Drosophila melanogaster"; "fruit fly"; ; rdfs:label "Drosophila melanogaster" . a owl:Class; rdfs:subClassOf ; "Pseudomonadales"; ; rdfs:label "Pseudomonadales" . a owl:Class; rdfs:subClassOf ; "Campylobacteraceae"; ; rdfs:label "Campylobacteraceae" . a owl:Class; rdfs:subClassOf , _:42be60; "Haemophilus"; ; rdfs:label "Haemophilus" . _:42be60 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf ; "Haemophilus haemolyticus"; ; rdfs:label "Haemophilus haemolyticus" . a owl:Class; rdfs:subClassOf ; "Haemophilus influenzae"; ; rdfs:label "Haemophilus influenzae" . a owl:Class; rdfs:subClassOf ; "Haemophilus parainfluenzae"; ; rdfs:label "Haemophilus parainfluenzae" . a owl:Class; rdfs:subClassOf ; "[Haemophilus] ducreyi"; ; rdfs:label "[Haemophilus] ducreyi" . a owl:Class; rdfs:subClassOf ; "Haemophilus parahaemolyticus"; ; rdfs:label "Haemophilus parahaemolyticus" . a owl:Class; rdfs:subClassOf , _:42be70, _:42be80; rdfs:label "Haemophilus sp."@en . _:42be70 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:42be80 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf ; "Verrucomicrobiota"; ; rdfs:label "Verrucomicrobiota" . a owl:Class; rdfs:subClassOf , _:42be90; "Collinsella aerofaciens"; ; rdfs:label "Collinsella aerofaciens" . _:42be90 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:42bea0; "Escherichia coli NC101"; ; rdfs:label "Escherichia coli NC101" . _:42bea0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:42beb0, _:42bec0; "Escherichia coli EPEC 32/73"; "Escherichia coli str. EPEC 32/73", "Escherichia coli strain EPEC 32/73"; ; rdfs:label "Escherichia coli EPEC 32/73" . _:42beb0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:42bec0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf ; "Debaryomycetaceae"; ; rdfs:label "Debaryomycetaceae" . a owl:Class; rdfs:subClassOf ; "Prevotella denticola F0289"; "Prevotella denticola str. F0289", "Prevotella denticola strain F0289"; ; rdfs:label "Prevotella denticola F0289" . a owl:Class; rdfs:subClassOf ; "Malassezia restricta"; ; rdfs:label "Malassezia restricta" . a owl:Class; rdfs:subClassOf ; "Malassezia sympodialis"; ; rdfs:label "Malassezia sympodialis" . a owl:Class; rdfs:subClassOf ; "Fusobacterium nucleatum subsp. nucleatum"; "Fusibacterium nucleatum subsp. nucleatum"; ; rdfs:label "Fusobacterium nucleatum subsp. nucleatum" . a owl:Class; rdfs:subClassOf ; "Fusobacterium polymorphum"; "Fusibacterium nucleatum subsp. polymorphum"; ; rdfs:label "Fusobacterium polymorphum" . a owl:Class; rdfs:subClassOf ; "Fusobacterium animalis"; "Fusibacterium nucleatum subsp. animalis"; ; rdfs:label "Fusobacterium animalis" . a owl:Class; rdfs:subClassOf ; "Malassezia pachydermatis"; ; rdfs:label "Malassezia pachydermatis" . a owl:Class; rdfs:subClassOf ; "Vertebrata "; "Vertebrata", "vertebrates"; ; rdfs:label "Vertebrata " . a owl:Class; rdfs:subClassOf ; "Streptococcus viridans"; ; rdfs:label "Streptococcus viridans" . a owl:Class; rdfs:subClassOf ; "Danio rerio"; "leopard danio", "zebra danio", "zebra fish", "zebrafish"; ; rdfs:label "Danio rerio" . a owl:Class; rdfs:subClassOf ; "Burkholderiales"; ; rdfs:label "Burkholderiales" . a owl:Class; rdfs:subClassOf ; "Comamonadaceae"; ; rdfs:label "Comamonadaceae" . a owl:Class; rdfs:subClassOf ; "Chlamydia"; ; rdfs:label "Chlamydia" . a owl:Class; rdfs:subClassOf ; rdfs:label "Chlamydia trachomatis"@en . a owl:Class; rdfs:subClassOf ; "Bacteroidaceae"; ; rdfs:label "Bacteroidaceae" . a owl:Class; rdfs:subClassOf , _:42bed0, _:42bee0; "Bacteroides"; ; rdfs:label "Bacteroides" . _:42bed0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:42bee0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:42bef0, _:42bf00; "Bacteroides fragilis"; ; rdfs:label "Bacteroides fragilis" . _:42bef0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:42bf00 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf ; "Bacteroides thetaiotaomicron"; ; rdfs:label "Bacteroides thetaiotaomicron" . a owl:Class; rdfs:subClassOf ; "Enterococcaceae"; ; rdfs:label "Enterococcaceae" . a owl:Class; rdfs:subClassOf ; "Bacteroides uniformis"; ; rdfs:label "Bacteroides uniformis" . a owl:Class; rdfs:subClassOf ; "Phocaeicola vulgatus"; ; rdfs:label "Phocaeicola vulgatus" . a owl:Class; rdfs:subClassOf ; "Centipeda "; "Centipeda"; ; rdfs:label "Centipeda " . a owl:Class; rdfs:subClassOf ; "Butyrivibrio"; ; rdfs:label "Butyrivibrio" . a owl:Class; rdfs:subClassOf ; "Anura"; "anurans", "frogs", "frogs & toads"; ; rdfs:label "Anura" . a owl:Class; rdfs:subClassOf ; "Xenopus "; "Xenopus"; ; rdfs:label "Xenopus " . a owl:Class; rdfs:subClassOf , _:42bf10, _:42bf20; "Porphyromonas"; ; rdfs:label "Porphyromonas" . _:42bf10 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:42bf20 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:42bf30, _:42bf40; "Porphyromonas gingivalis"; ; rdfs:label "Porphyromonas gingivalis" . _:42bf30 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:42bf40 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:42bf50, _:42bf60, _:42bf70, _:42bf80, _:42bf90, _:42bfa0, _:42bfb0, _:42bfc0, _:42bfd0; "Prevotella"; ; rdfs:label "Prevotella" . _:42bf50 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:42bf60 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:42bf70 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:42bf80 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:42bf90 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:42bfa0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:42bfb0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:42bfc0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:42bfd0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , , _:42bfe0; "Roseburia"; "Roseburya", "Roseburyella"; ; rdfs:label "Roseburia" . _:42bfe0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf ; "Coriobacteriaceae"; ; rdfs:label "Coriobacteriaceae" . a owl:Class; rdfs:subClassOf ; "Slackia"; ; rdfs:label "Slackia" . a owl:Class; rdfs:subClassOf , _:42bff0; "Eggerthella"; ; rdfs:label "Eggerthella" . _:42bff0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:42c000; "Eggerthella lenta"; ; rdfs:label "Eggerthella lenta" . _:42c000 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf ; "Cryptobacterium"; ; rdfs:label "Cryptobacterium" . a owl:Class; rdfs:subClassOf , _:42c010; "Cryptobacterium curtum"; ; rdfs:label "Cryptobacterium curtum" . _:42c010 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf ; "Dolosicoccus paucivorans"; ; rdfs:label "Dolosicoccus paucivorans" . a owl:Class; rdfs:subClassOf ; "Oxalobacter"; ; rdfs:label "Oxalobacter" . a owl:Class; rdfs:subClassOf ; "Aeromonadaceae"; ; rdfs:label "Aeromonadaceae" . a owl:Class; rdfs:subClassOf ; "Fusobacterium"; "Fusibacterium"; ; rdfs:label "Fusobacterium" . a owl:Class; rdfs:subClassOf ; "Coriobacteriia"; ; rdfs:label "Coriobacteriia" . a owl:Class; rdfs:subClassOf ; "Coriobacteriales"; ; rdfs:label "Coriobacteriales" . a owl:Class; rdfs:subClassOf ; "Bifidobacteriales"; ; rdfs:label "Bifidobacteriales" . a owl:Class; rdfs:subClassOf ; "Micrococcales"; ; rdfs:label "Micrococcales" . a owl:Class; rdfs:subClassOf ; "Mycobacteriales"; ; rdfs:label "Mycobacteriales" . a owl:Class; rdfs:subClassOf ; "Propionibacteriales"; "Propionicibacterineae"; ; rdfs:label "Propionibacteriales" . a owl:Class; rdfs:subClassOf ; "Microbacteriaceae"; ; rdfs:label "Microbacteriaceae" . a owl:Class; rdfs:subClassOf ; "Nocardiaceae"; ; rdfs:label "Nocardiaceae" . a owl:Class; rdfs:subClassOf ; "Geodermatophilaceae"; ; rdfs:label "Geodermatophilaceae" . a owl:Class; rdfs:subClassOf ; "Nakamurellaceae"; ; rdfs:label "Nakamurellaceae" . a owl:Class; rdfs:subClassOf ; "Fusobacterium nucleatum"; "Fusibacterium nucleatum"; ; rdfs:label "Fusobacterium nucleatum" . a owl:Class; rdfs:subClassOf , _:42c020; "Faecalibacterium prausnitzii"; ; rdfs:label "Faecalibacterium prausnitzii" . _:42c020 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf ; "Haemophilus parainfluenzae T3T1"; "Haemophilus parainfluenzae str. T3T1", "Haemophilus parainfluenzae strain T3T1"; ; rdfs:label "Haemophilus parainfluenzae T3T1" . a owl:Class; rdfs:subClassOf ; "Mogibacterium"; ; rdfs:label "Mogibacterium" . a owl:Class; rdfs:subClassOf ; "Magnolia globosa"; ; rdfs:label "Magnolia globosa" . a owl:Class; rdfs:subClassOf ; "Desulfovibrio"; ; rdfs:label "Desulfovibrio" . a owl:Class; rdfs:subClassOf ; "Umbilicariaceae"; ; rdfs:label "Umbilicariaceae" . a owl:Class; rdfs:subClassOf ; "Modestobacter"; ; rdfs:label "Modestobacter" . a owl:Class; rdfs:subClassOf ; "Peptacetobacter hiranonis"; ; rdfs:label "Peptacetobacter hiranonis" . a owl:Class; rdfs:subClassOf ; "[Clostridium] hylemonae"; ; rdfs:label "[Clostridium] hylemonae" . a owl:Class; rdfs:subClassOf ; "Desulfobulbus"; ; rdfs:label "Desulfobulbus" . a owl:Class; rdfs:subClassOf ; "Gallus gallus"; "Gallus domesticus", "bantam", "chicken", "chickens"; ; rdfs:label "Gallus gallus" . a owl:Class; rdfs:subClassOf ; "Salmonella enterica subsp. enterica serovar Typhi"; ; rdfs:label "Salmonella enterica subsp. enterica serovar Typhi" . a owl:Class; rdfs:subClassOf ; "Salmonella enterica subsp. enterica serovar Typhimurium"; ; rdfs:label "Salmonella enterica subsp. enterica serovar Typhimurium" . a owl:Class; rdfs:subClassOf ; "Megasphaera"; ; rdfs:label "Megasphaera" . a owl:Class; rdfs:subClassOf ; "Phocaeicola"; ; rdfs:label "Phocaeicola" . a owl:Class; rdfs:subClassOf ; rdfs:label "Selenomonadales"@en . a owl:Class; rdfs:subClassOf ; "Acidaminococcaceae"; ; rdfs:label "Acidaminococcaceae" . a owl:Class; rdfs:subClassOf ; "Negativicutes"; ; rdfs:label "Negativicutes" . a owl:Class; rdfs:subClassOf ; "Bacilli"; ; rdfs:label "Bacilli" . a owl:Class; rdfs:subClassOf ; "Nitrobacter hamburgensis"; ; rdfs:label "Nitrobacter hamburgensis" . a owl:Class; rdfs:subClassOf ; "Enterobacterales"; ; rdfs:label "Enterobacterales" . a owl:Class; rdfs:subClassOf ; "unclassified Staphylococcus"; ; rdfs:label "unclassified Staphylococcus" . a owl:Class; rdfs:subClassOf ; "Ehrlichia"; ; rdfs:label "Ehrlichia" . a owl:Class; rdfs:subClassOf ; "Flavonifractor"; ; rdfs:label "Flavonifractor" . a owl:Class; rdfs:subClassOf ; "Candidatus Saccharimonadota"; "Saccharimonadota", "candidate division 'Torf, mittlere Schicht' 7", "candidate division TM7"; ; rdfs:label "Candidatus Saccharimonadota" . a owl:Class; rdfs:subClassOf ; "Homo sapiens"; "human"; ; rdfs:label "Homo sapiens" . a owl:Class; rdfs:subClassOf ; "Selenomonas"; ; rdfs:label "Selenomonas" . a owl:Class; rdfs:subClassOf ; "Selenomonas ruminantium"; ; rdfs:label "Selenomonas ruminantium" . a owl:Class; rdfs:subClassOf , , _:42c030; "Bacteroidota"; "BCF group", "Bacteroides-Cytophaga-Flexibacter group", "CFB group", "CFB group bacteria", "Cytophaga-Flexibacter-Bacteroides phylum"; ; rdfs:label "Bacteroidota" . _:42c030 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf ; "Christensenellaceae"; "Borkfalkiaceae", "Comatemaea"; ; rdfs:label "Christensenellaceae" . a owl:Class; rdfs:subClassOf ; "Sutterellaceae"; ; rdfs:label "Sutterellaceae" . a owl:Class; rdfs:subClassOf ; "Rodentia"; "rodent", "rodents"; ; rdfs:label "Rodentia" . a owl:Class; rdfs:subClassOf ; ; rdfs:label "Porphyromonas macacae"@en . a owl:Class; owl:equivalentClass _:42c040; rdfs:subClassOf ; "planned process", "planned process"@en; "Injecting mice with a vaccine in order to test its efficacy"; ; "A processual entity that realizes a plan which is the concretization of a plan specification."@en; "'Plan' includes a future direction sense. That can be problematic if plans are changed during their execution. There are however implicit contingencies for protocols that an agent has in his mind that can be considered part of the plan, even if the agent didn't have them in mind before. Therefore, a planned process can diverge from what the agent would have said the plan was before executing it, by adjusting to problems encountered during execution (e.g. choosing another reagent with equivalent properties, if the originally planned one has run out.)", """We are only considering successfully completed planned processes. A plan may be modified, and details added during execution. For a given planned process, the associated realized plan specification is the one encompassing all changes made during execution. This means that all processes in which an agent acts towards achieving some objectives is a planned process."""; "Bjoern Peters"; "branch derived"; "6/11/9: Edited at workshop. Used to include: is initiated by an agent", "This class merges the previously separated objective driven process and planned process, as they the separation proved hard to maintain. (1/22/09, branch call)"@en; ; rdfs:label "planned process"@en . _:42c040 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:42c050 . _:42c050 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf ; "biological feature identification objective"@en; ; "Biological_feature_identification_objective is an objective role carried out by the proposition defining the aim of a study designed to examine or characterize a particular biological feature."@en; "Jennifer Fostel"@en; ; rdfs:label "biological feature identification objective"@en . a owl:Class; owl:equivalentClass _:42c060; rdfs:subClassOf ; "processed material"@en; "Examples include gel matrices, filter paper, parafilm and buffer solutions, mass spectrometer, tissue samples"@en; ; "Is a material entity that is created or changed during material processing."@en; "PERSON: Alan Ruttenberg"@en; ; rdfs:label "processed material"@en . _:42c060 a owl:Class; owl:intersectionOf _:42c070 . _:42c070 rdf:first ; rdf:rest _:42c090 . _:42c090 rdf:first _:42c080; rdf:rest rdf:nil . _:42c080 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:42c0a0, _:42c0b0; "evaluant role"@en; "When a specimen of blood is assayed for glucose concentration, the blood has the evaluant role. When measuring the mass of a mouse, the evaluant is the mouse. When measuring the time of DNA replication, the evaluant is the DNA. When measuring the intensity of light on a surface, the evaluant is the light source."@en; ; "a role that inheres in a material entity that is realized in an assay in which data is generated about the bearer of the evaluant role"@en; "Role call - 17nov-08: JF and MC think an evaluant role is always specified input of a process. Even in the case where we have an assay taking blood as evaluant and outputting blood, the blood is not the specified output at the end of the assay (the concentration of glucose in the blood is)"@en, "examples of features that could be described in an evaluant: quality.... e.g. \"contains 10 pg/ml IL2\", or \"no glucose detected\")"@en; "GROUP: Role Branch"; "OBI"; "Feb 10, 2009. changes after discussion at OBI Consortium Workshop Feb 2-6, 2009. accepted as core term."; ; rdfs:label "evaluant role"@en . _:42c0a0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:42c0b0 a owl:Restriction; owl:onProperty ; owl:allValuesFrom . a owl:Class; owl:equivalentClass _:42c0c0; rdfs:subClassOf , _:42c0d0, _:42c0e0, _:42c130; "assay"@en; "Assay the wavelength of light emitted by excited Neon atoms. Count of geese flying over a house."; ; "A planned process with the objective to produce information about the material entity that is the evaluant, by physically examining it or its proxies."@en; "12/3/12: BP: the reference to the 'physical examination' is included to point out that a prediction is not an assay, as that does not require physical examiniation. "; "PlanAndPlannedProcess Branch"@en; "measuring"@en, "scientific observation"@en; "OBI branch derived"@en; ; "study assay"; "any method"; rdfs:label "assay"@en . _:42c0c0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:42c0d0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:42c0e0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:42c0f0 . _:42c0f0 a owl:Class; owl:intersectionOf _:42c100 . _:42c100 rdf:first ; rdf:rest _:42c120 . _:42c120 rdf:first _:42c110; rdf:rest rdf:nil . _:42c110 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:42c130 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:42c140 . _:42c140 a owl:Class; owl:intersectionOf _:42c150 . _:42c150 rdf:first ; rdf:rest _:42c170 . _:42c170 rdf:first _:42c160; rdf:rest rdf:nil . _:42c160 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:42c180 . _:42c180 a owl:Class; owl:intersectionOf _:42c190 . _:42c190 rdf:first ; rdf:rest _:42c1b0 . _:42c1b0 rdf:first _:42c1a0; rdf:rest rdf:nil . _:42c1a0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:42c1c0; "sample preparation for assay"@en; ; "A sample_preparation_for_assay is a protocol_application including material_enrollments and biomaterial_transformations. definition_source: OBI."@en; "PlanAndPlannedProcess Branch"@en; "study"@en; "OBI branch derived"@en; ; rdfs:label "sample preparation for assay"@en . _:42c1c0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf ; "culture medium"; "A growth medium or culture medium is a substance in which microorganisms or cells can grow. Wikipedia, growth medium, Feb 29, 2008"@en; ; "a processed material that provides the needed nourishment for microorganisms or cells grown in vitro."; """changed from a role to a processed material based on on Aug 22, 2011 dev call. Details see the tracker item: http://sourceforge.net/tracker/?func=detail&aid=3325270&group_id=177891&atid=886178 Modification made by JZ."""; "Person: Jennifer Fostel, Jie Zheng"@en; "OBI"@en; ; rdfs:label "culture medium"@en . a owl:Class; rdfs:subClassOf ; "reagent role"; "Buffer, dye, a catalyst, a solvating agent."@en; ; "A role inhering in a biological or chemical entity that is intended to be applied in a scientific technique to participate (or have molecular components that participate) in a chemical reaction that facilitates the generation of data about some entity distinct from the bearer, or the generation of some specified material output distinct from the bearer."@en; "PERSON:Matthew Brush"@en; "reagent"; "PERSON:Matthew Brush"; """Feb 10, 2009. changes after discussion at OBI Consortium Workshop Feb 2-6, 2009. accepted as core term. May 28 2013. Updated definition taken from ReO based on discussions initiated in Philly 2011 workshop. Former defnition described a narrower view of reagents in chemistry that restricts bearers of the role to be chemical entities (\"a role played by a molecular entity used to produce a chemical reaction to detect, measure, or produce other substances\"). Updated definition allows for broader view of reagents in the domain of biomedical research to include larger materials that have parts that participate chemically in a molecular reaction or interaction. """; ; rdfs:comment """(copied from ReO) Reagents are distinguished from instruments or devices that also participate in scientific techniques by the fact that reagents are chemical or biological in nature and necessarily participate in or have parts that participate in some chemical interaction or reaction during their intended participation in some technique. By contrast, instruments do not participate in a chemical reaction/interaction during the technique. Reagents are distinguished from study subjects/evaluants in that study subjects and evaluants are that about which conclusions are drawn and knowledge is sought in an investigation - while reagents, by definition, are not. It should be noted, however, that reagent and study subject/evaluant roles can be borne by instances of the same type of material entity - but a given instance will realize only one of these roles in the execution of a given assay or technique. For example, taq polymerase can bear a reagent role or an evaluant role. In a DNA sequencing assay aimed at generating sequence data about some plasmid, the reagent role of the taq polymerase is realized. In an assay to evaluate the quality of the taq polymerase itself, the evaluant/study subject role of the taq is realized, but not the reagent role since the taq is the subject about which data is generated. In regard to the statement that reagents are 'distinct' from the specified outputs of a technique, note that a reagent may be incorporated into a material output of a technique, as long as the IDENTITY of this output is distinct from that of the bearer of the reagent role. For example, dNTPs input into a PCR are reagents that become part of the material output of this technique, but this output has a new identity (ie that of a 'nucleic acid molecule') that is distinct from the identity of the dNTPs that comprise it. Similarly, a biotin molecule input into a cell labeling technique are reagents that become part of the specified output, but the identity of the output is that of some modified cell specimen which shares identity with the input unmodified cell specimen, and not with the biotin label. Thus, we see that an important criteria of 'reagent-ness' is that it is a facilitator, and not the primary focus of an investigation or material processing technique (ie not the specified subject/evaluant about which knowledge is sought, or the specified output material of the technique)."""; rdfs:label "reagent role"@en . a owl:Class; owl:equivalentClass _:42c1d0; rdfs:subClassOf , _:42c1e0, _:42c1f0, _:42c200, _:42c210; "material processing"; "A cell lysis, production of a cloning vector, creating a buffer."; ; "A planned process which results in physical changes in a specified input material"@en; "PERSON: Bjoern Peters"@en, "PERSON: Frank Gibson", "PERSON: Jennifer Fostel", "PERSON: Melanie Courtot", "PERSON: Philippe Rocca Serra"; "material transformation"@en; "OBI branch derived"@en; ; rdfs:label "material processing"@en . _:42c1d0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:42c1e0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:42c1f0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:42c200 a owl:Restriction; owl:onProperty ; owl:allValuesFrom . _:42c210 a owl:Restriction; owl:onProperty ; owl:allValuesFrom . a owl:Class; rdfs:subClassOf , _:42c220; "specimen role"; "liver section; a portion of a culture of cells; a nemotode or other animal once no longer a subject (generally killed); portion of blood from a patient."; ; "a role borne by a material entity that is gained during a specimen collection process and that can be realized by use of the specimen in an investigation"@en; "22Jun09. The definition includes whole organisms, and can include a human. The link between specimen role and study subject role has been removed. A specimen taken as part of a case study is not considered to be a population representative, while a specimen taken as representing a population, e.g. person taken from a cohort, blood specimen taken from an animal) would be considered a population representative and would also bear material sample role.", "Note: definition is in specimen creation objective which is defined as an objective to obtain and store a material entity for potential use as an input during an investigation.", """blood taken from animal: animal continues in study, whereas blood has role specimen. something taken from study subject, leaves the study and becomes the specimen."""@en, """parasite example - when parasite in people we study people, people are subjects and parasites are specimen - when parasite extracted, they become subject in the following study specimen can later be subject."""@en; "GROUP: Role Branch"; "OBI"; ; rdfs:label "specimen role"@en . _:42c220 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:42c230 . _:42c230 a owl:Class; owl:intersectionOf _:42c240 . _:42c240 rdf:first ; rdf:rest _:42c260 . _:42c260 rdf:first _:42c250; rdf:rest rdf:nil . _:42c250 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf ; "molecular feature identification objective"@en; ; "Molecular_feature_identification_objective is a biological_feature_identification_objective role describing a study designed to examine or characterize molecular features of a biological system, e.g. expression profiling, copy number of molecular components, epigenetic modifications."@en; "Jennifer Fostel"@en; ; rdfs:label "molecular feature identification objective"@en . a owl:Class; rdfs:subClassOf , _:42c270; "DNA extraction"@en; ; "A DNA extraction is a nucleic acid extraction where the desired output material is DNA."@en; "PlanAndPlannedProcess Branch"@en; "OBI branch derived"@en; ; rdfs:label "DNA extraction"@en . _:42c270 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:42c280 . _:42c280 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:42c290 . _:42c290 a owl:Class; owl:unionOf _:42c2a0 . _:42c2a0 rdf:first ; rdf:rest _:42c2b0 . _:42c2b0 rdf:first ; rdf:rest rdf:nil . "analyte role"; "Glucose in blood (measured in an assay to determine the concentration of glucose)."; ; "A measurand role borne by a molecular entity or an atom and realized in an analyte assay which achieves the objective to measure the magnitude/concentration/amount of the analyte in the entity bearing evaluant role."@en; "interestingly, an analyte is still an analyte even if it is not detected. for this reason it does not bear a specified input role", "pH (technically the inverse log of [H+]) may be considered a quality; this remains to be tested.", "qualities such as weight, color are not assayed but measured, so they do not fall into this category."; "GROUP: Role Branch"; "OBI"; "Feb 10, 2009. changes after discussion at OBI Consortium Workshop Feb 2-6, 2009. accepted as core term."; ; rdfs:label "analyte role"@en . a owl:Class; rdfs:subClassOf , _:42c2c0; "extract"@en; "Up-regulation of inflammatory signalings by areca nut extract and role of cyclooxygenase-2 -1195G>a polymorphism reveal risk of oral cancer. Cancer Res. 2008 Oct 15;68(20):8489-98. PMID: 18922923"@en; ; "an extract is a material entity which results from an extraction process"@en; "PERSON: Philippe Rocca-Serra"; "extracted material"@en; "GROUP: OBI Biomatrial Branch"; ; rdfs:label "extract"@en . _:42c2c0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; owl:equivalentClass _:42c2d0; rdfs:subClassOf ; "transcription profiling assay"; "Whole genome transcription profiling of Anaplasma phagocytophilum in human and tick host cells by tiling array analysis. BMC Genomics. 2008 Jul 31;9:364. PMID: 18671858"; ; "An assay that determines gene expression and transcription activity using ribonucleic acids collected from a material entity."; "This term should encompass transcription and post-transcription, but before translation into protein. So 'gene expression' itself is too broad, and we use 'transcription profiling identification objective' to constrain the scope of this term."; "Philippe Rocca-Serra"; "gene expression profiling", "transcription profiling"; "OBI"; ; rdfs:label "transcription profiling assay" . _:42c2d0 a owl:Class; owl:intersectionOf _:42c2e0 . _:42c2e0 rdf:first ; rdf:rest _:42c300 . _:42c300 rdf:first _:42c2f0; rdf:rest _:42c3e0 . _:42c2f0 a owl:Class; owl:intersectionOf _:42c320 . _:42c320 rdf:first _:42c310; rdf:rest _:42c380 . _:42c310 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:42c330 . _:42c330 a owl:Class; owl:intersectionOf _:42c340 . _:42c340 rdf:first ; rdf:rest _:42c360 . _:42c360 rdf:first _:42c350; rdf:rest rdf:nil . _:42c350 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:42c380 rdf:first _:42c370; rdf:rest rdf:nil . _:42c370 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:42c390 . _:42c390 a owl:Class; owl:intersectionOf _:42c3a0 . _:42c3a0 rdf:first ; rdf:rest _:42c3c0 . _:42c3c0 rdf:first _:42c3b0; rdf:rest rdf:nil . _:42c3b0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:42c3e0 rdf:first _:42c3d0; rdf:rest _:42c480 . _:42c3d0 a owl:Class; owl:intersectionOf _:42c400 . _:42c400 rdf:first _:42c3f0; rdf:rest _:42c460 . _:42c3f0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:42c410 . _:42c410 a owl:Class; owl:intersectionOf _:42c420 . _:42c420 rdf:first ; rdf:rest _:42c440 . _:42c440 rdf:first _:42c430; rdf:rest rdf:nil . _:42c430 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:42c460 rdf:first _:42c450; rdf:rest rdf:nil . _:42c450 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:42c480 rdf:first _:42c470; rdf:rest _:42c4e0 . _:42c470 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:42c490 . _:42c490 a owl:Class; owl:intersectionOf _:42c4a0 . _:42c4a0 rdf:first ; rdf:rest _:42c4c0 . _:42c4c0 rdf:first _:42c4b0; rdf:rest rdf:nil . _:42c4b0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:42c4e0 rdf:first _:42c4d0; rdf:rest _:42c500 . _:42c4d0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:42c500 rdf:first _:42c4f0; rdf:rest _:42c530 . _:42c4f0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:42c510 . _:42c510 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:42c530 rdf:first _:42c520; rdf:rest rdf:nil . _:42c520 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf ; "assay objective"; "the objective to determine the weight of a mouse."; ; "an objective specification to determine a specified type of information about an evaluated entity (the material entity bearing evaluant role)"@en; "PPPB branch"; "PPPB branch"; ; rdfs:label "assay objective"@en . a owl:Class; rdfs:subClassOf , _:42c540, _:42c550; "measure function"@en; "A glucometer measures blood glucose concentration, the glucometer has a measure function."; ; "Measure function is a function that is borne by a processed material and realized in a process in which information about some entity is expressed relative to some reference."@en; "PERSON: Daniel Schober", "PERSON: Helen Parkinson", "PERSON: Melanie Courtot", "PERSON:Frank Gibson"; ; rdfs:label "measure function"@en . _:42c540 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:42c550 a owl:Restriction; owl:onProperty ; owl:allValuesFrom _:42c560 . _:42c560 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf ; "material transformation objective"; "The objective to create a mouse infected with LCM virus. The objective to create a defined solution of PBS."; ; "an objective specifiction that creates an specific output object from input materials."@en; "PERSON: Bjoern Peters", "PERSON: Frank Gibson", "PERSON: Jennifer Fostel", "PERSON: Melanie Courtot", "PERSON: Philippe Rocca-Serra"; "artifact creation objective"@en; "GROUP: OBI PlanAndPlannedProcess Branch"; ; rdfs:label "material transformation objective"@en . a owl:Class; owl:equivalentClass _:42c570; rdfs:subClassOf ; "DNA sequencing assay"; "Illumina (Solexa) sequencing is an example of DNA sequencing"; ; "A sequencing assay which determines information on the sequence of a DNA molecule."; "Philippe Rocca-Serra"; "nucleotide sequencing"; "url:https://en.wikipedia.org/wiki/DNA_sequencing"; ; rdfs:label "DNA sequencing assay" . _:42c570 a owl:Class; owl:intersectionOf _:42c580 . _:42c580 rdf:first ; rdf:rest _:42c5a0 . _:42c5a0 rdf:first _:42c590; rdf:rest _:42c640 . _:42c590 a owl:Class; owl:intersectionOf _:42c5c0 . _:42c5c0 rdf:first _:42c5b0; rdf:rest _:42c620 . _:42c5b0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:42c5d0 . _:42c5d0 a owl:Class; owl:intersectionOf _:42c5e0 . _:42c5e0 rdf:first ; rdf:rest _:42c600 . _:42c600 rdf:first _:42c5f0; rdf:rest rdf:nil . _:42c5f0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:42c620 rdf:first _:42c610; rdf:rest rdf:nil . _:42c610 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:42c640 rdf:first _:42c630; rdf:rest _:42c720 . _:42c630 a owl:Class; owl:intersectionOf _:42c660 . _:42c660 rdf:first _:42c650; rdf:rest _:42c6c0 . _:42c650 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:42c670 . _:42c670 a owl:Class; owl:intersectionOf _:42c680 . _:42c680 rdf:first ; rdf:rest _:42c6a0 . _:42c6a0 rdf:first _:42c690; rdf:rest rdf:nil . _:42c690 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:42c6c0 rdf:first _:42c6b0; rdf:rest rdf:nil . _:42c6b0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:42c6d0 . _:42c6d0 a owl:Class; owl:intersectionOf _:42c6e0 . _:42c6e0 rdf:first ; rdf:rest _:42c700 . _:42c700 rdf:first _:42c6f0; rdf:rest rdf:nil . _:42c6f0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:42c720 rdf:first _:42c710; rdf:rest rdf:nil . _:42c710 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; owl:equivalentClass _:42c730; rdfs:subClassOf ; "material separation objective"; "The objective to obtain multiple aliquots of an enzyme preparation. The objective to obtain cells contained in a sample of blood."; ; "is an objective to transform a material entity into spatially separated components."; "PPPB branch"; "PPPB branch"; ; rdfs:label "material separation objective" . _:42c730 a owl:Class; owl:unionOf _:42c740 . _:42c740 rdf:first ; rdf:rest _:42c750 . _:42c750 rdf:first ; rdf:rest rdf:nil . a owl:Class; owl:equivalentClass _:42c760; rdfs:subClassOf , _:42c7a0, _:42c7b0; "specimen collection process"; "drawing blood from a patient for analysis, collecting a piece of a plant for depositing in a herbarium, buying meat from a butcher in order to measure its protein content in an investigation"; ; "A planned process with the objective of collecting a specimen."; "Note: definition is in specimen creation objective which is defined as an objective to obtain and store a material entity for potential use as an input during an investigation.", "Philly2013: A specimen collection can have as part a material entity acquisition, such as ordering from a bank. The distinction is that specimen collection necessarily involves the creation of a specimen role. However ordering cell lines cells from ATCC for use in an investigation is NOT a specimen collection, because the cell lines already have a specimen role.", "Philly2013: The specimen_role for the specimen is created during the specimen collection process.", """label changed to 'specimen collection process' on 10/27/2014, details see tracker: http://sourceforge.net/p/obi/obi-terms/716/"""; "Bjoern Peters"; "specimen collection"; "5/31/2012: This process is not necessarily an acquisition, as specimens may be collected from materials already in posession", "6/9/09: used at workshop"; ; rdfs:label "specimen collection process" . _:42c760 a owl:Class; owl:intersectionOf _:42c770 . _:42c770 rdf:first ; rdf:rest _:42c790 . _:42c790 rdf:first _:42c780; rdf:rest rdf:nil . _:42c780 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:42c7a0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:42c7b0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; owl:equivalentClass _:42c7c0; rdfs:subClassOf , , _:42c810; "sample from organism"; ; "a material obtained from an organism in order to be a representative of the whole"; "5/29: This is a helper class for now", "we need to work on this: Is taking a urine sample a material separation process? If not, we will need to specify what 'taking a sample from organism' entails. We can argue that the objective to obtain a urine sample from a patient is enough to call it a material separation process, but it could dilute what material separation was supposed to be about."; ; rdfs:label "sample from organism" . _:42c7c0 a owl:Class; owl:intersectionOf _:42c7e0 . _:42c7e0 rdf:first _:42c7d0; rdf:rest _:42c800 . _:42c7d0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:42c800 rdf:first _:42c7f0; rdf:rest rdf:nil . _:42c7f0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:42c810 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf ; "portioning objective"; "The objective to obtain multiple aliquots of an enzyme preparation."; ; "A material separation objective aiming to separate material into multiple portions, each of which contains a similar composition of the input material."; ; rdfs:label "portioning objective" . a owl:Class; rdfs:subClassOf ; "separation into different composition objective"; "The objective to obtain cells contained in a sample of blood."; ; "A material separation objective aiming to separate a material entity that has parts of different types, and end with at least one output that is a material with parts of fewer types (modulo impurities)."; "We should be using has the grain relations or concentrations to distinguish the portioning and other sub-objectives"; ; rdfs:label "separation into different composition objective" . a owl:Class; rdfs:subClassOf ; "specimen collection objective"; "The objective to collect bits of excrement in the rainforest. The objective to obtain a blood sample from a patient."; ; "A objective specification to obtain a material entity for potential use as an input during an investigation."; "Bjoern Peters"; "Bjoern Peters"; ; rdfs:label "specimen collection objective" . a owl:Class; rdfs:subClassOf ; "host role"; "In biology, a host is an organism that harbors a virus or parasite, or a mutual or commensal symbiont, typically providing nourishment and shelter. http://en.wikipedia.org/wiki/Host_(biology) 30 March 09"; ; "host role is a role played by an organism and realized by providing nourishment, shelter or a means of reproduction to another organism within the organism playing the host role"; "30Mar09 virus reproducing inside a cell; bacteria causing a disease, host can be harmed or not. we want to avoid a cat sitting on my lap and an animal care technician; these are not examples or hosts; dental cares = on tooth, but part of outer layer of tooth, so covered by \"within\" in the definition"; "GROUP: Role Branch"; "30 Mar09 submitted by vaccine community", "OBI", "http://en.wikipedia.org/wiki/Host_(biology)"; ; rdfs:label "host role" . a owl:Class; rdfs:subClassOf ; "material sample role"; "a role borne by a portion of blood taken to represent all the blood in an organism; the role borne by a population of humans with HIV enrolled in a study taken to represent patients with HIV in general."; ; "A material sample role is a specimen role borne by a material entity that is the output of a material sampling process."; "7/13/09: Note that this is a relational role: between the sample taken and the 'sampled' material of which the sample is thought to be representative off."; ; rdfs:label "material sample role" . a owl:Class; owl:equivalentClass _:42c820; rdfs:subClassOf ; "material sampling process"; ; "A specimen gathering process with the objective to obtain a specimen that is representative of the input material entity"; ; rdfs:label "material sampling process" . _:42c820 a owl:Class; owl:intersectionOf _:42c830 . _:42c830 rdf:first ; rdf:rest _:42c850 . _:42c850 rdf:first _:42c840; rdf:rest _:42c870 . _:42c840 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:42c870 rdf:first _:42c860; rdf:rest rdf:nil . _:42c860 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; owl:equivalentClass _:42c880; rdfs:subClassOf ; "material sample"; "blood drawn from patient to measure his systemic glucose level. A population of humans with HIV enrolled in a study taken to represent patients with HIV in general."; ; "A material entity that has the material sample role"; "OBI: workshop"; "sample population"; ; "sample"; rdfs:label "material sample" . _:42c880 a owl:Class; owl:intersectionOf _:42c890 . _:42c890 rdf:first ; rdf:rest _:42c8b0 . _:42c8b0 rdf:first _:42c8a0; rdf:rest rdf:nil . _:42c8a0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf ; "material maintenance objective"; ; "An objective specification maintains some or all of the qualities of a material over time."; "PERSON: Bjoern Peters"; "PERSON: Bjoern Peters"; ; rdfs:label "material maintenance objective" . a owl:Class; owl:equivalentClass _:42c8c0; rdfs:subClassOf ; "primary structure of DNA macromolecule"; ; "a quality of a DNA molecule that inheres in its bearer due to the order of its DNA nucleotide residues."; "placeholder for SO"; "BP et al"; ; rdfs:label "primary structure of DNA macromolecule" . _:42c8c0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:42c8d0 . _:42c8d0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; owl:equivalentClass _:42c8e0; rdfs:subClassOf ; "measurement device"; "A ruler, a microarray scanner, a Geiger counter."; ; "A device in which a measure function inheres."; "GROUP:OBI Philly workshop"; "OBI"; ; rdfs:label "measurement device" . _:42c8e0 a owl:Class; owl:intersectionOf _:42c8f0 . _:42c8f0 rdf:first ; rdf:rest _:42c910 . _:42c910 rdf:first _:42c900; rdf:rest rdf:nil . _:42c900 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; owl:equivalentClass _:42c920; rdfs:subClassOf ; "material maintenance"; ; "a process with that achieves the objective to maintain some or all of the characteristics of an input material over time"; ; rdfs:label "material maintenance" . _:42c920 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:42c930, _:42c940; "RNA extract"; ; "an extract which is the output of an extraction process in which RNA molecules are isolated from a specimen."; "PERSON: Chris Stoeckert", "PERSON: Jie Zheng"; "Group: UPenn Group"; ; rdfs:label "RNA extract" . _:42c930 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:42c940 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; owl:equivalentClass _:42c950; rdfs:subClassOf , ; "processed specimen"; """A tissue sample that has been sliced and stained for a histology study. A blood specimen that has been centrifuged to obtain the white blood cells."""; ; "A specimen that has been intentionally physically modified."; "Bjoern Peters"; "Bjoern Peters"; ; rdfs:comment "A tissue sample that has been sliced and stained for a histology study."; rdfs:label "processed specimen" . _:42c950 a owl:Class; owl:intersectionOf _:42c960 . _:42c960 rdf:first ; rdf:rest _:42c970 . _:42c970 rdf:first ; rdf:rest rdf:nil . a owl:Class; rdfs:subClassOf , _:42c980, _:42c990; "device"; "A voltmeter is a measurement device which is intended to perform some measure function.", "An autoclave is a device that sterlizes instruments or contaminated waste by applying high temperature and pressure."; ; "A material entity that is designed to perform a function in a scientific investigation, but is not a reagent."; """2012-12-17 JAO: In common lab usage, there is a distinction made between devices and reagents that is difficult to model. Therefore we have chosen to specifically exclude reagents from the definition of \"device\", and are enumerating the types of roles that a reagent can perform. 2013-6-5 MHB: The following clarifications are outcomes of the May 2013 Philly Workshop. Reagents are distinguished from devices that also participate in scientific techniques by the fact that reagents are chemical or biological in nature and necessarily participate in some chemical interaction or reaction during the realization of their experimental role. By contrast, devices do not participate in such chemical reactions/interactions. Note that there are cases where devices use reagent components during their operation, where the reagent-device distinction is less clear. For example: (1) An HPLC machine is considered a device, but has a column that holds a stationary phase resin as an operational component. This resin qualifies as a device if it participates purely in size exclusion, but bears a reagent role that is realized in the running of a column if it interacts electrostatically or chemically with the evaluant. The container the resin is in (“the column”) considered alone is a device. So the entire column as well as the entire HPLC machine are devices that have a reagent as an operating part. (2) A pH meter is a device, but its electrode component bears a reagent role in virtue of its interacting directly with the evaluant in execution of an assay. (3) A gel running box is a device that has a metallic lead as a component that participates in a chemical reaction with the running buffer when a charge is passed through it. This metallic lead is considered to have a reagent role as a component of this device realized in the running of a gel. In the examples above, a reagent is an operational component of a device, but the device itself does not realize a reagent role (as bearing a reagent role is not transitive across the part_of relation). In this way, the asserted disjointness between a reagent and device holds, as both roles are never realized in the same bearer during execution of an assay. """; "PERSON: Helen Parkinson"; "instrument"; "OBI development call 2012-12-17."; ; rdfs:label "device" . _:42c980 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:42c990 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:42c9a0; "sequence data"; "example of usage: the representation of a nucleotide sequence in FASTA format used for a sequence similarity search."; ; """A measurement datum that representing the primary structure of a macromolecule(it's sequence) sometimes associated with an indicator of confidence of that measurement. """; "Person:Chris Stoeckert"; "GROUP: OBI"; ; rdfs:label "sequence data"@en . _:42c9a0 a owl:Class; owl:intersectionOf _:42c9b0 . _:42c9b0 rdf:first ; rdf:rest _:42c9d0 . _:42c9d0 rdf:first _:42c9c0; rdf:rest rdf:nil . _:42c9c0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , , _:42c9e0, _:42ca30; "nucleic acid extract"; ; "An extract that is the output of an extraction process in which nucleic acid molecules are isolated from a specimen."; "PERSON: Jie Zheng"; "UPenn Group"; ; rdfs:label "nucleic acid extract" . _:42c9e0 a owl:Class; owl:intersectionOf _:42ca00 . _:42ca00 rdf:first _:42c9f0; rdf:rest _:42ca20 . _:42c9f0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:42ca20 rdf:first _:42ca10; rdf:rest rdf:nil . _:42ca10 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:42ca30 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:42ca40, _:42ca50; "DNA extract"; ; "The output of an extraction process in which DNA molecules are purified in order to exclude DNA from organellas."; "Person: Jie Zheng"; "Group: UPenn group"; ; rdfs:label "DNA extract" . _:42ca40 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:42ca50 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:42ca60; "nucleic acid sequencer"; ; "An device that is used to determine the order of nucleotides in nucleic acid sequences."; "PERSON: Erik Segerdell"; "PERSON: Erik Segerdell"; ; rdfs:label "nucleic acid sequencer" . _:42ca60 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:42ca70; "protein sequencer"; ; "An device that is used to determine the order of amino acids in protein sequences."; "PERSON: Erik Segerdell"; "PERSON: Erik Segerdell"; ; rdfs:label "protein sequencer" . _:42ca70 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , , _:42ca80, _:42cb10, _:42cba0, _:42cbf0, _:42cc00, _:42cc20; "RNA-seq assay"; ; "An transcription profiling assay that determines an RNA sequence by analyzing the transcibed regions of the genome and or to quantitate transcript abundance."; "James Malone"; "transcription profiling by high throughput sequencing"; "EFO:0002770"; ; rdfs:label "RNA-seq assay" . _:42ca80 a owl:Class; owl:intersectionOf _:42caa0 . _:42caa0 rdf:first _:42ca90; rdf:rest _:42cb00 . _:42ca90 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:42cab0 . _:42cab0 a owl:Class; owl:intersectionOf _:42cac0 . _:42cac0 rdf:first ; rdf:rest _:42cae0 . _:42cae0 rdf:first _:42cad0; rdf:rest rdf:nil . _:42cad0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:42cb00 rdf:first _:42caf0; rdf:rest rdf:nil . _:42caf0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:42cb10 a owl:Class; owl:intersectionOf _:42cb30 . _:42cb30 rdf:first _:42cb20; rdf:rest _:42cb90 . _:42cb20 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:42cb40 . _:42cb40 a owl:Class; owl:intersectionOf _:42cb50 . _:42cb50 rdf:first ; rdf:rest _:42cb70 . _:42cb70 rdf:first _:42cb60; rdf:rest rdf:nil . _:42cb60 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:42cb90 rdf:first _:42cb80; rdf:rest rdf:nil . _:42cb80 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:42cba0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:42cbb0 . _:42cbb0 a owl:Class; owl:intersectionOf _:42cbc0 . _:42cbc0 rdf:first ; rdf:rest _:42cbe0 . _:42cbe0 rdf:first _:42cbd0; rdf:rest rdf:nil . _:42cbd0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:42cbf0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:42cc00 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:42cc10 . _:42cc10 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:42cc20 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf ; "transcription profiling identification objective"@en; ; "A molecular feature identification objective that aims to characterize the abundance of transcripts"@en; "Person: Chris Stoeckert, Jie Zheng"@en; "Group: Penn Group"@en; ; rdfs:label "transcription profiling identification objective"@en . a owl:Class; owl:equivalentClass _:42cc30; rdfs:subClassOf ; "specimen from organism"@en; ; "A specimen that derives from an anatomical part or substance arising from an organism. Examples of tissue specimen include tissue, organ, physiological system, blood, or body location (arm)."; "PERSON: Chris Stoeckert, Jie Zheng"; "tissue specimen"@en; "MO_954 organism_part"; ; rdfs:label "specimen from organism"@en . _:42cc30 a owl:Class; owl:intersectionOf _:42cc50 . _:42cc50 rdf:first _:42cc40; rdf:rest _:42cc70 . _:42cc40 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:42cc70 rdf:first _:42cc60; rdf:rest rdf:nil . _:42cc60 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:42cc80 . _:42cc80 a owl:Class; owl:unionOf _:42cc90 . _:42cc90 rdf:first ; rdf:rest _:42cca0 . _:42cca0 rdf:first ; rdf:rest rdf:nil . a owl:Class; rdfs:subClassOf ; "sampling time measurement datum"@en; ; "A time measurement datum when an observation is made or a sample is taken from a material as measured from some reference point."; "Person: Chris Stoeckert"@en; "time point"@en; "MO_738 timepoint"@en; ; rdfs:label "sampling time measurement datum"@en . a owl:Class; rdfs:subClassOf , _:42ccb0; "DNA sequence data"; "The part of a FASTA file that contains the letters ACTGGGAA "; ; "A sequence data item that is about the primary structure of DNA"; "OBI call; Bjoern Peters"; "OBI call; Melanie Courtout"; "8/29/11 call: This is added after a request from Melanie and Yu. They should review it further. This should be a child of 'sequence data', and as of the current definition will infer there. "; ; rdfs:label "DNA sequence data" . _:42ccb0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:42ccc0; "specimen collection time measurement datum"@en; ; "A time measurement datum that is the measure of the time when the specimens are collected."@en; "Person: Chris Stoeckert, Jie Zheng"@en; "collection date"@en; "NIAID GSCID-BRC metadata working group"@en; ; "Specimen Collection Date"; "NIAID GSCID-BRC"; rdfs:label "specimen collection time measurement datum"@en . _:42ccc0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:42ccd0 . _:42ccd0 a owl:Class; owl:intersectionOf _:42cce0 . _:42cce0 rdf:first ; rdf:rest _:42cd00 . _:42cd00 rdf:first _:42ccf0; rdf:rest rdf:nil . _:42ccf0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; owl:equivalentClass _:42cd10; rdfs:subClassOf ; "sample preparation for sequencing assay"@en; ; "A sample preparation for assay that preparation of nucleic acids for a sequencing assay"; "PERSON: Chris Stoeckert, Jie Zheng"; "NIAID GSCID-BRC metadata working group"; ; "Nucleic Acid Preparation Method"; "NIAID GSCID-BRC"; rdfs:label "sample preparation for sequencing assay"@en . _:42cd10 a owl:Class; owl:intersectionOf _:42cd20 . _:42cd20 rdf:first ; rdf:rest _:42cd40 . _:42cd40 rdf:first _:42cd30; rdf:rest _:42cda0 . _:42cd30 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:42cd50 . _:42cd50 a owl:Class; owl:intersectionOf _:42cd60 . _:42cd60 rdf:first ; rdf:rest _:42cd80 . _:42cd80 rdf:first _:42cd70; rdf:rest rdf:nil . _:42cd70 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:42cda0 rdf:first _:42cd90; rdf:rest rdf:nil . _:42cd90 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:42cdb0 . _:42cdb0 a owl:Class; owl:intersectionOf _:42cdc0 . _:42cdc0 rdf:first ; rdf:rest _:42cde0 . _:42cde0 rdf:first _:42cdd0; rdf:rest rdf:nil . _:42cdd0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf ; "cell freezing medium"; ; "A processed material that serves as a liquid vehicle for freezing cells for long term quiescent stroage, which contains chemicls needed to sustain cell viability across freeze-thaw cycles. "; "PERSON: Matthew Brush"; ; rdfs:label "cell freezing medium"@en . a owl:Class; rdfs:subClassOf , _:42cdf0, _:42ce00; "scalar value specification"; ; "A value specification that consists of two parts: a numeral and a unit label"; "PERSON:Bjoern Peters"; ; rdfs:label "scalar value specification" . _:42cdf0 a owl:Restriction; owl:onProperty ; owl:minCardinality "1"^^xsd:nonNegativeInteger . _:42ce00 a owl:Restriction; owl:onProperty ; owl:minCardinality "1"^^xsd:nonNegativeInteger . a owl:Class; rdfs:subClassOf ; "value specification"; "The value of 'positive' in a classification scheme of \"positive or negative\"; the value of '20g' on the quantitative scale of mass."; ; "An information content entity that specifies a value within a classification scheme or on a quantitative scale."; "This term is currently a descendant of 'information content entity', which requires that it 'is about' something. A value specification of '20g' for a measurement data item of the mass of a particular mouse 'is about' the mass of that mouse. However there are cases where a value specification is not clearly about any particular. In the future we may change 'value specification' to remove the 'is about' requirement."; "PERSON:Bjoern Peters"; ; rdfs:label "value specification" . a owl:Class; rdfs:subClassOf ; "whole genome sequencing assay"; "WGS permits comprehensive sequencing of introns and exons, whereas whole exome sequencing (WES) allows deeper sequencing of exonic regions at a lower cost. Due to the large number of genetic variants found in each genome, it is necessary to use filtering approaches to distinguish deleterious from benign variants. WES has been used successfully to identify novel genetic causes of primary immunodeficiency. Complex structural variations and non-Mendelian disorders remain challenges for WGS."; ; "A DNA sequencing assay that intends to provide information about the sequence of an entire genome of an organism."; "Genotyping assays should ideally identify which part of the genome the information is about. We do not currently have a good way to do this. That information should be added later."; "ImmPort"; "WGS"; "PMID:23095910", "PMID:25827230"; ; rdfs:label "whole genome sequencing assay" . a owl:Class; rdfs:subClassOf , _:42ce10; "measurand role"@en; ; "A role borne by a material entity and realized in an assay which achieves the objective to measure the magnitude/concentration/amount of the measurand in the entity bearing evaluant role."; "Person: Alan Ruttenberg, Jie Zheng"; "https://en.wiktionary.org/wiki/measurand"; "https://github.com/obi-ontology/obi/issues/778"; ; rdfs:label "measurand role"@en . _:42ce10 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; owl:equivalentClass _:42ce20; rdfs:subClassOf ; "specimen"@en; "Biobanking of blood taken and stored in a freezer for potential future investigations stores specimen."; ; "A material entity that has the specimen role."@en; "Note: definition is in specimen creation objective which is defined as an objective to obtain and store a material entity for potential use as an input during an investigation."; "PERSON: James Malone", "PERSON: Philippe Rocca-Serra"; "GROUP: OBI Biomaterial Branch"@en; ; rdfs:label "specimen"@en . _:42ce20 a owl:Class; owl:intersectionOf _:42ce30 . _:42ce30 rdf:first ; rdf:rest _:42ce50 . _:42ce50 rdf:first _:42ce40; rdf:rest rdf:nil . _:42ce40 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:42ce60, _:42ce70, _:42ce80; "cultured cell population"; """A cultured cell population applied in an experiment: \"293 cells expressing TrkA were serum-starved for 18 hours and then neurotrophins were added for 10 min before cell harvest.\" (Lee, Ramee, et al. \"Regulation of cell survival by secreted proneurotrophins.\" Science 294.5548 (2001): 1945-1948). A cultured cell population maintained in vitro: \"Rat cortical neurons from 15 day embryos are grown in dissociated cell culture and maintained in vitro for 8–12 weeks\" (Dichter, Marc A. \"Rat cortical neurons in cell culture: culture methods, cell morphology, electrophysiology, and synapse formation.\" Brain Research 149.2 (1978): 279-293)."""; ; "A processed material comprised of a collection of cultured cells that has been continuously maintained together in culture and shares a common propagation history."; "2013-6-5 MHB: This OBI class was formerly called 'cell culture', but label changed and definition updated following CLO alignment efforts in spring 2013, during which the intent of this class was clarified to refer to portions of a culture or line rather than a complete cell culture or line."@en; "PERSON:Matthew Brush"; "cell culture sample"; "PERSON:Matthew Brush"; ; rdfs:comment "The extent of a 'cultured cell population' is restricted only in that all cell members must share a propagation history (ie be derived through a common lineage of passages from an initial culture). In being defined in this way, this class can be used to refer to the populations that researchers actually use in the practice of science - ie are the inputs to culturing, experimentation, and sharing. The cells in such populations will be a relatively uniform population as they have experienced similar selective pressures due to their continuous co-propagation. And this population will also have a single passage number, again owing to their common passaging history. Cultured cell populations represent only a collection of cells (ie do not include media, culture dishes, etc), and include populations of cultured unicellular organisms or cultured multicellular organism cells. They can exist under active culture, stored in a quiescent state for future use, or applied experimentally."; rdfs:label "cultured cell population" . _:42ce60 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:42ce70 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:42ce80 a owl:Restriction; owl:onProperty ; owl:allValuesFrom . a owl:Class; rdfs:subClassOf , _:42ce90; "extraction"; "nucleic acid extraction using phenol chloroform"; ; "A material separation in which a desired component of an input material is separated from the remainder"; """Current the output of material processing defined as the molecular entity, main component in the output material entity, rather than the material entity that have grain molecular entity. 'nucleic acid extract' is the output of 'nucleic acid extraction' and has grain 'nucleic acid'. However, the output of 'nucleic acid extraction' is 'nucleic acid' rather than 'nucleic acid extract'. We are aware of this issue and will work it out in the future."""@en; "Person:Bjoern Peters", "Philippe Rocca-Serra"; ; rdfs:label "extraction"@en . _:42ce90 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:42cea0; "DNA sequencer"@en; "ABI 377 DNA Sequencer, ABI 310 DNA Sequencer"@en; ; "A DNA sequencer is an instrument that determines the order of deoxynucleotides in deoxyribonucleic acid sequences."@en; "Trish Whetzel"@en; "MO"@en; ; rdfs:label "DNA sequencer"@en . _:42cea0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:42ceb0, _:42cec0; "collecting specimen from organism"@en; "taking a sputum sample from a cancer patient, taking the spleen from a killed mouse, collecting a urine sample from a patient"@en; ; "a process with the objective to obtain a material entity that was part of an organism for potential future use in an investigation"@en . _:42ceb0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:42cec0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . "PERSON:Bjoern Peters"@en; "IEDB"@en; ; rdfs:label "collecting specimen from organism"@en . a owl:Class; rdfs:subClassOf , _:42ced0, _:42cee0, _:42cef0; "environmental material collection"@en; "Taking 1 liter of surface ocean water from the San Diego Mission Bay Jetty. Capturing mice living in rural Arkansas"@en; ; "environmental_material_collection is an acquisition where an object is taken from an environment and put into a storage container. Roles include, environment, thing collected, container, acquirer."@en; """relabel the term and add axiom connecting to EnVO:'environmental material' discussed on obi-dev call 9/28/2015, details see: https://sourceforge.net/p/obi/obi-terms/779/"""; "Bjoern Peters, Alan Ruttenberg"@en; "IEDB"@en; "the researcher is very interested in the location"@en; ; rdfs:label "environmental material collection process"@en . _:42ced0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:42cee0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:42cef0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; owl:equivalentClass _:42cf00; rdfs:subClassOf , _:42cf10, _:42cf20; "material component separation"@en; "Using a cell sorter to separate a mixture of T cells into two fractions; one with surface receptor CD8 and the other lacking the receptor, or purification"@en; ; "a material processing in which components of an input material become segregated in space"@en; "Bjoern Peters"@en; "IEDB"@en; ; rdfs:label "material component separation"@en . _:42cf00 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:42cf10 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:42cf20 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:42cf30, _:42cf40, _:42cf80, _:42cf90; "maintaining cell culture"@en; "When harvesting blood from a human, isolating T cells, and then limited dilution cloning of the cells, the maintaining_cell_culture step comprises all steps after the initial dilution and plating of the cells into culture, e.g. placing the culture into an incubator, changing or adding media, and splitting a cell culture"@en; ; "a protocol application in which cells are kept alive in a defined environment outside of an organism. part of cell_culturing"@en; "PlanAndPlannedProcess Branch"@en; "OBI branch derived"@en; ; rdfs:label "maintaining cell culture"@en . _:42cf30 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:42cf40 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:42cf50 . _:42cf50 a owl:Class; owl:unionOf _:42cf60 . _:42cf60 rdf:first ; rdf:rest _:42cf70 . _:42cf70 rdf:first ; rdf:rest rdf:nil . _:42cf80 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:42cf90 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:42cfa0, _:42cfb0, _:42cfc0, _:42cfd0; "'establishing cell culture'"; ; "a process through which a new type of cell culture or cell line is created, either through the isolation and culture of one or more cells from a fresh source, or the deliberate experimental modification of an existing cell culture (e.g passaging a primary culture to become a secondary culture or line, or the immortalization or stable genetic modification of an existing culture or line)."; "PERSON:Matthew Brush"; "PERSON:Matthew Brush"; ; rdfs:comment "A 'cell culture' as used here referes to a new lineage of cells in culture deriving from a single biological source.. New cultures are established through the initial isolation and culturing of cells from an organismal source, or through changes in an existing cell culture or line that result in a new culture with unique characteristics. This can occur through the passaging/selection of a primary culture into a secondary culture or line, or experimental modifications of an existing cell culture or line such as an immortalization process or other stable genetic modification. This class covers establishment of cultures of either multicellular organism cells or unicellular organisms."; rdfs:label "establishing cell culture" . _:42cfa0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:42cfb0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:42cfc0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:42cfd0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; owl:equivalentClass _:42cfe0; rdfs:subClassOf ; "sequencing assay"; "The use of the Sanger method of DNA sequencing to determine the order of the nucleotides in a DNA template"; ; "An assay the uses chemical or biochemical means to infer the sequence of a biomaterial"; "PlanAndPlannedProcess Branch"; "OBI branch derived"; ; rdfs:label "sequencing assay" . _:42cfe0 a owl:Class; owl:intersectionOf _:42cff0 . _:42cff0 rdf:first ; rdf:rest _:42d010 . _:42d010 rdf:first _:42d000; rdf:rest _:42d130 . _:42d000 a owl:Class; owl:intersectionOf _:42d030 . _:42d030 rdf:first _:42d020; rdf:rest _:42d0d0 . _:42d020 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:42d040 . _:42d040 a owl:Class; owl:intersectionOf _:42d050 . _:42d050 rdf:first ; rdf:rest _:42d070 . _:42d070 rdf:first _:42d060; rdf:rest rdf:nil . _:42d060 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:42d080 . _:42d080 a owl:Class; owl:unionOf _:42d090 . _:42d090 rdf:first ; rdf:rest _:42d0a0 . _:42d0a0 rdf:first ; rdf:rest _:42d0b0 . _:42d0b0 rdf:first ; rdf:rest rdf:nil . _:42d0d0 rdf:first _:42d0c0; rdf:rest rdf:nil . _:42d0c0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:42d0e0 . _:42d0e0 a owl:Class; owl:unionOf _:42d0f0 . _:42d0f0 rdf:first ; rdf:rest _:42d100 . _:42d100 rdf:first ; rdf:rest _:42d110 . _:42d110 rdf:first ; rdf:rest rdf:nil . _:42d130 rdf:first _:42d120; rdf:rest _:42d290 . _:42d120 a owl:Class; owl:intersectionOf _:42d150 . _:42d150 rdf:first _:42d140; rdf:rest _:42d1f0 . _:42d140 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:42d160 . _:42d160 a owl:Class; owl:intersectionOf _:42d170 . _:42d170 rdf:first ; rdf:rest _:42d190 . _:42d190 rdf:first _:42d180; rdf:rest rdf:nil . _:42d180 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:42d1a0 . _:42d1a0 a owl:Class; owl:unionOf _:42d1b0 . _:42d1b0 rdf:first ; rdf:rest _:42d1d0 . _:42d1d0 rdf:first _:42d1c0; rdf:rest rdf:nil . _:42d1c0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:42d1f0 rdf:first _:42d1e0; rdf:rest rdf:nil . _:42d1e0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:42d200 . _:42d200 a owl:Class; owl:intersectionOf _:42d220 . _:42d220 rdf:first _:42d210; rdf:rest _:42d270 . _:42d210 a owl:Class; owl:unionOf _:42d230 . _:42d230 rdf:first ; rdf:rest _:42d250 . _:42d250 rdf:first _:42d240; rdf:rest rdf:nil . _:42d240 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:42d270 rdf:first _:42d260; rdf:rest rdf:nil . _:42d260 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:42d290 rdf:first _:42d280; rdf:rest _:42d2b0 . _:42d280 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:42d2b0 rdf:first _:42d2a0; rdf:rest rdf:nil . _:42d2a0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:42d2c0 . _:42d2c0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:42d2d0; "RNA extraction"@en; ; "A RNA extraction is a nucleic acid extraction where the desired output material is RNA"@en; "PlanAndPlannedProcess Branch"@en; "OBI branch derived"@en; "requested by Helen Parkinson for MO"@en; ; rdfs:label "RNA extraction"@en . _:42d2d0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:42d2e0; "nucleic acid extraction"@en; "Phenol / chlorophorm extraction disolvation of protein content folllowed by ethanol precipitation of the nucleic acid fraction over night in the fridge followed by centrifugation to obtain a nucleic acid pellet."@en; ; "a material separation to recover the nucleic acid fraction of an input material"@en; "PlanAndPlannedProcess Branch"@en; "OBI branch derived"@en; "requested by Helen Parkinson for MO. Could be defined class"@en; ; rdfs:label "nucleic acid extraction"@en . _:42d2e0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:42d2f0, _:42d300; "infection process"; ; "the detrimental process in which an infectious agent colonizes or replicates in a host environment"@en; "IEDB"@en; "IEDB"@en; ; rdfs:label "infection process"@en . _:42d2f0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:42d300 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:42d310; "disposition to infect an organism"; ; "Is a role borne by an agent, and realized when in contact with or inside another organism in which it is capable of replicating and causing disease"@en; "IEDB"@en; "IEDB"@en; ; rdfs:label "disposition to infect an organism"@en . _:42d310 a owl:Restriction; owl:onProperty ; owl:allValuesFrom . a owl:Class; rdfs:subClassOf ; "pathologic process"; ; "abnormal, harmful processes caused by or associated with a disease"@en; "IEDB"@en; "IEDB"@en; ; rdfs:label "pathologic process"@en . a owl:Class; rdfs:subClassOf ; "A genome is a material entity that represents the entirety of an organism's hereditary information. The genome includes both the genes and the non-coding sequences of the DNA and RNA."; "Oliver He"; "Book: Eugene Nester, Denise Anderson, C. Evans Roberts, Jr., Microbiology (Companion Site): A Human Perspective, 7th Edition. Mcgraw Hill, October 18, 2011. ISBN-13: 978-0073375311", "WEB: http://en.wikipedia.org/wiki/Genome"; ; rdfs:label "genome"@en . a owl:Class; rdfs:subClassOf ; "A gene is a material entity that represents the entire DNA sequence required for synthesis of a functional protein or RNA molecule. "; "Oliver He"; "WEB: http://www.ncbi.nlm.nih.gov/books/NBK21640/"; ; rdfs:label "gene"@en . a owl:Class; rdfs:subClassOf ; "A disposition (i) to undergo pathological processes that (ii) exists in an organism because of one or more disorders in that organism."@en; ; rdfs:label "disease" . a owl:Class; owl:equivalentClass _:42d320; rdfs:subClassOf , _:42d380, _:42d390, _:42d3a0; "A biological interaction between a microbiome and its host"; "Oliver He, Jie Zheng, Jihad Obeid, Anna Maria Masci"; "microbiome-host interaction"; "https://genomebiology.biomedcentral.com/articles/10.1186/s13059-019-1669-4", "https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4644880/"; rdfs:label "host-microbiome interaction"@en . _:42d320 a owl:Class; owl:intersectionOf _:42d330 . _:42d330 rdf:first ; rdf:rest _:42d350 . _:42d350 rdf:first _:42d340; rdf:rest _:42d370 . _:42d340 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:42d370 rdf:first _:42d360; rdf:rest rdf:nil . _:42d360 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:42d380 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:42d390 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:42d3a0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:42d3b0; "A microbiome located in a human body"; "JZ, YH"; "https://www.ncbi.nlm.nih.gov/pubmed/3418802/"; rdfs:label "human microbiome"@en . _:42d3b0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:42d3c0; "A biome that consists of a collection of microorganisms (i.e., microbiota) and the surrounding environment where the microorganisms reside."; "Oliver He, Jie Zheng, Jihad Obeid, Anna Maria Masci"; "https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4520061/"; rdfs:label "microbiome"@en . _:42d3c0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:42d3d0; "A microbiome located in a mouse body"; "JZ, YH"; rdfs:label "mouse microbiome"@en . _:42d3d0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf ; "A microbiome that includes a collective population of bacterial organisms."; "YH, JZ, JO, AA"; rdfs:label "bacterial microbiome"@en . a owl:Class; rdfs:subClassOf ; "A microbiome that includes a collective population of fungal microorganisms."; "YH, JZ, JO, AA"; "https://www.ncbi.nlm.nih.gov/pubmed/3708484/"; rdfs:label "fungal microbiome"@en . a owl:Class; rdfs:subClassOf ; "A microbiome that includes a collective population of virus"; rdfs:label "viral microbiome"@en . a owl:Class; rdfs:subClassOf ; "A fungal microbiome that is located in the skin of a host organism"; "YH, JZ, JO, AA"; "https://www.ncbi.nlm.nih.gov/pubmed/3708484/"; rdfs:label "fungal microbiome of skin"@en . a owl:Class; rdfs:subClassOf ; "A fungal microbiome that is located in a mucosal site of a host organism (e.g., urogenital tract, oral cavity, and gastrointestinal tract)"; "YH, JZ, JO, AA"; "https://www.ncbi.nlm.nih.gov/pubmed/3708484/"; rdfs:label "fungal microbiome of mucosal site"@en . a owl:Class; rdfs:subClassOf ; "A fungal microbiome that is located in a lung of a host organism"; "YH, JZ, JO, AA"; "https://www.ncbi.nlm.nih.gov/pubmed/3708484/"; rdfs:label "fungal microbiome of lung"@en . a owl:Class; rdfs:subClassOf ; "A host-microbiome interaction where the microbiome interacts with the host immune system"; "YH, JZ, JO, AA"; rdfs:label "interaction between microbiome and host immune system"@en . a owl:Class; rdfs:subClassOf ; "A interaction between microbiome and host immune system where the immune system is the host adaptive immune system"; "YH, JZ, JO, AA"; "https://www.ncbi.nlm.nih.gov/pubmed/27366226"; rdfs:label "interaction between microbiome and adaptive immune system"@en . a owl:Class; rdfs:subClassOf ; "a human microbiome that is located in a human respiratory system"; "JO, AA, YH"; rdfs:label "microbiome in human lung"@en . a owl:Class; rdfs:subClassOf ; "a human microbiome that is located in a human lung"; "JO, AA, YH"; rdfs:label "microbiome in human respiratory system"@en . a owl:Class; rdfs:subClassOf ; "a human microbiome that is located in a human oral system"; "JO, AA, YH"; rdfs:label "microbiome in human oral"@en . a owl:Class; rdfs:subClassOf ; "a human microbiome that is located in a human gastrointestinal system"; "JO, AA, YH"; rdfs:label "microbiome in human gastrointestinal system"@en . a owl:Class; rdfs:subClassOf ; "a human microbiome that is located in a human cutaneous system"; "JO, AA, YH"; rdfs:label "microbiome in human cutaneous system"@en . a owl:Class; rdfs:subClassOf ; "a human microbiome that is located in a human urogenital system"; "JO, AA, YH"; rdfs:label "microbiome in human urogenital system"@en . a owl:Class; rdfs:subClassOf , _:42d3e0; "A host-microbiome interaction where the host is human"; "YH, HW"; rdfs:label "human-microbiome interaction"@en . _:42d3e0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:42d3f0 . _:42d3f0 a owl:Class; owl:intersectionOf _:42d400 . _:42d400 rdf:first ; rdf:rest _:42d420 . _:42d420 rdf:first _:42d410; rdf:rest rdf:nil . _:42d410 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf ; "A microbiome located in a human gut."; "YH"; "human gut microbiota"; rdfs:comment "A human being's gut microbiota contains tens of trillions of microorganisms, including at least 1000 different species of known bacteria with more than 3 million genes (150 times more than human genes). Microbiota can, in total, weigh up to 2 kg. One third of our gut microbiota is common to most people, while two thirds are specific to each one of us. In other words, the microbiota in your intestine is like an individual identity card. URL: http://www.gutmicrobiotaforhealth.com/en/about-gut-microbiota-info/"; rdfs:label "human gut microbiome"@en . a owl:Class; rdfs:subClassOf , _:42d430, _:42d480; "An interaction between human and gut microbiome."; "YH"; rdfs:label "human-gut microbiome interaction"@en . _:42d430 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:42d440 . _:42d440 a owl:Class; owl:intersectionOf _:42d450 . _:42d450 rdf:first ; rdf:rest _:42d470 . _:42d470 rdf:first _:42d460; rdf:rest rdf:nil . _:42d460 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:42d480 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:42d490 . _:42d490 a owl:Class; owl:intersectionOf _:42d4a0 . _:42d4a0 rdf:first ; rdf:rest _:42d4c0 . _:42d4c0 rdf:first _:42d4b0; rdf:rest rdf:nil . _:42d4b0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:42d4d0 . _:42d4d0 a owl:Class; owl:intersectionOf _:42d4e0 . _:42d4e0 rdf:first ; rdf:rest _:42d500 . _:42d500 rdf:first _:42d4f0; rdf:rest rdf:nil . _:42d4f0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf ; "A human-gut microbiome interaction that is associated with bowel syndrome."; "YH"; "https://www.ncbi.nlm.nih.gov/pubmed/25864640"; rdfs:label "human gut microbiome interaction in bowel syndrome"@en . a owl:Class; rdfs:subClassOf ; "A human-gut microbiome interaction that is associated with Crohn's disease."; "YH"; "https://www.ncbi.nlm.nih.gov/pubmed/25864640"; rdfs:label "human gut microbiome interaction in Crohn's disease"@en . a owl:Class; rdfs:subClassOf , _:42d510; "A human-gut microbiome interaction that is associated with colon cancer."; "YH"; "https://www.ncbi.nlm.nih.gov/pubmed/25864640"; rdfs:label "colon cancer human-gut microbiome interaction"@en . _:42d510 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:42d520 . _:42d520 a owl:Class; owl:intersectionOf _:42d530 . _:42d530 rdf:first ; rdf:rest _:42d550 . _:42d550 rdf:first _:42d540; rdf:rest rdf:nil . _:42d540 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf ; "A human-gut microbiome interaction that involves in Clostridium difficile"; "YH"; "https://www.ncbi.nlm.nih.gov/pubmed/4892173/"; rdfs:label "human gut microbiome and Clostridium difficile interaction"@en . a owl:Class; rdfs:subClassOf ; "A human-gut microbiome interaction where antibiotics have significant and long-lasting effects on the intestinal microbiota and consequently reduce colonization resistance against Clostridium difficile."; "YH"; "https://www.ncbi.nlm.nih.gov/pubmed/4892173/"; rdfs:label "antibiotics reducing colonization resistance against C. difficile in human gut"@en . a owl:Class; rdfs:subClassOf ; "A human-gut microbiome interaction where a fecal microbiota transplantation is used to restore a human gut microbiome to a state resistant to Clostridium difficile infection."; "YH"; "restoring human gut microbiome resistance to CDI by FMT"; "https://www.ncbi.nlm.nih.gov/pubmed/4328137/"; rdfs:label "restoring human gut microbiome resistance to C. difficile infection by fecal microbiota transplantation"@en . a owl:Class; rdfs:subClassOf ; "An infection process that is caused by Clostridioides difficile."@en; "YH"; "CDI"; rdfs:label "Clostridioides difficile infection" . a owl:Class; rdfs:subClassOf , _:42d560, _:42d570; "A human gut-microbiome interaction that is associated with rheumatoid arthritis (RA)."; "YH"; "https://www.ncbi.nlm.nih.gov/pubmed/4840970/"; rdfs:label "RA human-gut microbiome interaction"@en . _:42d560 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:42d570 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:42d580 . _:42d580 a owl:Class; owl:intersectionOf _:42d590 . _:42d590 rdf:first ; rdf:rest _:42d5b0 . _:42d5b0 rdf:first _:42d5a0; rdf:rest rdf:nil . _:42d5a0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:42d5c0; "An association of human gut microbiota with rheumatoid arthritis (RA) that shows a patient with RV exhibits decreased gut microbial diversity"; "YH"; "https://www.ncbi.nlm.nih.gov/pubmed/4840970/"; rdfs:label "patient with RA having decreased gut microbial diversity"@en . _:42d5c0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:42d5d0 . _:42d5d0 a owl:Class; owl:intersectionOf _:42d5e0 . _:42d5e0 rdf:first ; rdf:rest _:42d600 . _:42d600 rdf:first _:42d5f0; rdf:rest rdf:nil . _:42d5f0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf ; "A quality with an increased quantity of a type of organism (e.g., bacteria inside human gut) compared with control."; "YH, HW, HY"; rdfs:label "increased organism quantity compared with healthy control"@en . a owl:Class; rdfs:subClassOf ; "A quality with an decreased microbiome organism dirversity in a host microbiome environment (e.g., gut)."; "YH, HW, HY"; rdfs:label "descreased microbiome organism diversity"@en . a owl:Class; owl:equivalentClass _:42d610; rdfs:subClassOf , _:42d700, _:42d710; "a RA human-gut microbiome interaction that shows an decrease of Klebsiella pneumoniae in patients with RA compared with healthy controls."; "Haihe Wang, Hong Yu, Yongqun He"; "https://www.ncbi.nlm.nih.gov/pubmed/?term=26214836"; rdfs:label "depletion of Klebsiella pneumoniae in RA human gut"@en . _:42d610 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:42d620 . _:42d620 a owl:Class; owl:intersectionOf _:42d630 . _:42d630 rdf:first ; rdf:rest _:42d650 . _:42d650 rdf:first _:42d640; rdf:rest _:42d670 . _:42d640 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:42d670 rdf:first _:42d660; rdf:rest rdf:nil . _:42d660 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:42d680 . _:42d680 a owl:Class; owl:intersectionOf _:42d690 . _:42d690 rdf:first ; rdf:rest _:42d6b0 . _:42d6b0 rdf:first _:42d6a0; rdf:rest rdf:nil . _:42d6a0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:42d6c0 . _:42d6c0 a owl:Class; owl:intersectionOf _:42d6d0 . _:42d6d0 rdf:first ; rdf:rest _:42d6f0 . _:42d6f0 rdf:first _:42d6e0; rdf:rest rdf:nil . _:42d6e0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:42d700 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:42d710 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf ; "A quality with a depleted quantity of a type of organism (e.g., bacteria inside human gut) compared with control."; "YH, HW, HY"; rdfs:label "decreased organism quantity compared with healthy controls"@en . a owl:Class; rdfs:subClassOf , _:42d720, _:42d770; "An interaction between human and oral microbiome."; "YH WH YH"; rdfs:label "human oral cavity microbiome interaction"@en . _:42d720 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:42d730 . _:42d730 a owl:Class; owl:intersectionOf _:42d740 . _:42d740 rdf:first ; rdf:rest _:42d760 . _:42d760 rdf:first _:42d750; rdf:rest rdf:nil . _:42d750 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:42d770 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:42d780 . _:42d780 a owl:Class; owl:intersectionOf _:42d790 . _:42d790 rdf:first ; rdf:rest _:42d7b0 . _:42d7b0 rdf:first _:42d7a0; rdf:rest rdf:nil . _:42d7a0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:42d7c0 . _:42d7c0 a owl:Class; owl:intersectionOf _:42d7d0 . _:42d7d0 rdf:first ; rdf:rest _:42d7f0 . _:42d7f0 rdf:first _:42d7e0; rdf:rest rdf:nil . _:42d7e0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; owl:equivalentClass _:42d800; rdfs:subClassOf , _:42d8f0, _:42d900; "a RA human-gut microbiome interaction that shows an expansion of Gordonibacter pamelaeae in patients with RA compared with healthy controls."; "Haihe Wang, Hong Yu, Yongqun He"; "https://www.ncbi.nlm.nih.gov/pubmed/26214836/"; rdfs:label "expansion of Gordonibacter pamelaeae in RA human gut"@en . _:42d800 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:42d810 . _:42d810 a owl:Class; owl:intersectionOf _:42d820 . _:42d820 rdf:first ; rdf:rest _:42d840 . _:42d840 rdf:first _:42d830; rdf:rest _:42d860 . _:42d830 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:42d860 rdf:first _:42d850; rdf:rest rdf:nil . _:42d850 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:42d870 . _:42d870 a owl:Class; owl:intersectionOf _:42d880 . _:42d880 rdf:first ; rdf:rest _:42d8a0 . _:42d8a0 rdf:first _:42d890; rdf:rest rdf:nil . _:42d890 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:42d8b0 . _:42d8b0 a owl:Class; owl:intersectionOf _:42d8c0 . _:42d8c0 rdf:first ; rdf:rest _:42d8e0 . _:42d8e0 rdf:first _:42d8d0; rdf:rest rdf:nil . _:42d8d0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:42d8f0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:42d900 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; owl:equivalentClass _:42d910; rdfs:subClassOf , _:42da00, _:42da10; "a RA human-gut microbiome interaction that shows an expansion of Prevotellaceae in patients with chronic RA compared with healthy controls."; "Haihe Wang, Hong Yu, Yongqun He"; "https://www.ncbi.nlm.nih.gov/pmc/articles/PMID:24192039/"; rdfs:label "expansion of Prevotellaceae in RA human gut"@en . _:42d910 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:42d920 . _:42d920 a owl:Class; owl:intersectionOf _:42d930 . _:42d930 rdf:first ; rdf:rest _:42d950 . _:42d950 rdf:first _:42d940; rdf:rest _:42d970 . _:42d940 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:42d970 rdf:first _:42d960; rdf:rest rdf:nil . _:42d960 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:42d980 . _:42d980 a owl:Class; owl:intersectionOf _:42d990 . _:42d990 rdf:first ; rdf:rest _:42d9b0 . _:42d9b0 rdf:first _:42d9a0; rdf:rest rdf:nil . _:42d9a0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:42d9c0 . _:42d9c0 a owl:Class; owl:intersectionOf _:42d9d0 . _:42d9d0 rdf:first ; rdf:rest _:42d9f0 . _:42d9f0 rdf:first _:42d9e0; rdf:rest rdf:nil . _:42d9e0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:42da00 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:42da10 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; owl:equivalentClass _:42da20; rdfs:subClassOf , _:42db10, _:42db20; "a RA human-gut microbiome interaction that shows an decrease of Bifidobacterium bifidum in patients with RA compared with healthy controls."; "Haihe Wang, Hong Yu, Yongqun He"; "https://www.ncbi.nlm.nih.gov/pubmed/?term=26214836"; rdfs:label "depletion of Bifidobacterium bifidum in RA human gut"@en . _:42da20 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:42da30 . _:42da30 a owl:Class; owl:intersectionOf _:42da40 . _:42da40 rdf:first ; rdf:rest _:42da60 . _:42da60 rdf:first _:42da50; rdf:rest _:42da80 . _:42da50 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:42da80 rdf:first _:42da70; rdf:rest rdf:nil . _:42da70 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:42da90 . _:42da90 a owl:Class; owl:intersectionOf _:42daa0 . _:42daa0 rdf:first ; rdf:rest _:42dac0 . _:42dac0 rdf:first _:42dab0; rdf:rest rdf:nil . _:42dab0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:42dad0 . _:42dad0 a owl:Class; owl:intersectionOf _:42dae0 . _:42dae0 rdf:first ; rdf:rest _:42db00 . _:42db00 rdf:first _:42daf0; rdf:rest rdf:nil . _:42daf0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:42db10 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:42db20 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; owl:equivalentClass _:42db30; rdfs:subClassOf , _:42dc20, _:42dc30; "a RA human-gut microbiome interaction that shows an decrease of Veillonellain in patients with RA compared with healthy controls."; "Haihe Wang, Hong Yu, Yongqun He"; "https://www.ncbi.nlm.nih.gov/pubmed/?term=26214836"; rdfs:label "depletion of Veillonella in RA human gut"@en . _:42db30 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:42db40 . _:42db40 a owl:Class; owl:intersectionOf _:42db50 . _:42db50 rdf:first ; rdf:rest _:42db70 . _:42db70 rdf:first _:42db60; rdf:rest _:42db90 . _:42db60 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:42db90 rdf:first _:42db80; rdf:rest rdf:nil . _:42db80 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:42dba0 . _:42dba0 a owl:Class; owl:intersectionOf _:42dbb0 . _:42dbb0 rdf:first ; rdf:rest _:42dbd0 . _:42dbd0 rdf:first _:42dbc0; rdf:rest rdf:nil . _:42dbc0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:42dbe0 . _:42dbe0 a owl:Class; owl:intersectionOf _:42dbf0 . _:42dbf0 rdf:first ; rdf:rest _:42dc10 . _:42dc10 rdf:first _:42dc00; rdf:rest rdf:nil . _:42dc00 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:42dc20 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:42dc30 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; owl:equivalentClass _:42dc40; rdfs:subClassOf , _:42dd30, _:42dd40; "RA human-gut microbiome interaction that shows an decrease of Sutterella wadsworthensis in patients with RA compared with healthy controls."; "Haihe Wang, Hong Yu, Yongqun He"; "https://www.ncbi.nlm.nih.gov/pubmed/?term=26214836"; rdfs:label "depletion of Sutterella wadsworthensis in RA human gut"@en . _:42dc40 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:42dc50 . _:42dc50 a owl:Class; owl:intersectionOf _:42dc60 . _:42dc60 rdf:first ; rdf:rest _:42dc80 . _:42dc80 rdf:first _:42dc70; rdf:rest _:42dca0 . _:42dc70 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:42dca0 rdf:first _:42dc90; rdf:rest rdf:nil . _:42dc90 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:42dcb0 . _:42dcb0 a owl:Class; owl:intersectionOf _:42dcc0 . _:42dcc0 rdf:first ; rdf:rest _:42dce0 . _:42dce0 rdf:first _:42dcd0; rdf:rest rdf:nil . _:42dcd0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:42dcf0 . _:42dcf0 a owl:Class; owl:intersectionOf _:42dd00 . _:42dd00 rdf:first ; rdf:rest _:42dd20 . _:42dd20 rdf:first _:42dd10; rdf:rest rdf:nil . _:42dd10 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:42dd30 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:42dd40 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; owl:equivalentClass _:42dd50 . _:42dd50 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:42dd60 . _:42dd60 a owl:Class; owl:intersectionOf _:42dd70 . _:42dd70 rdf:first ; rdf:rest _:42dd90 . _:42dd90 rdf:first _:42dd80; rdf:rest _:42ddb0 . _:42dd80 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:42ddb0 rdf:first _:42dda0 . _:42dda0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:42ddc0 . _:42ddc0 a owl:Class; owl:intersectionOf _:42ddd0 . _:42ddd0 rdf:first ; rdf:rest _:42ddf0 . _:42ddf0 rdf:first _:42dde0 . _:42dde0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:42de00 . _:42de00 a owl:Class; owl:intersectionOf _:42de10 . _:42de10 rdf:first ; rdf:rest _:42de30 . _:42de30 rdf:first _:42de20 . _:42de20 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:42de30 rdf:rest rdf:nil . _:42ddf0 rdf:rest rdf:nil . _:42ddb0 rdf:rest rdf:nil . rdfs:subClassOf , _:42de40, _:42de50; "a RA human-gut microbiome interaction that shows an decrease of Megamonas hypermegale in patients with RA compared with healthy controls."; "Haihe Wang, Hong Yu, Yongqun He"; "https://www.ncbi.nlm.nih.gov/pubmed/?term=26214836"; rdfs:label "depletion of Megamonas hypermegale in RA human gut"@en . _:42de40 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:42de50 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; owl:equivalentClass _:42de60; rdfs:subClassOf , _:42df50, _:42df60; "a RA human-gut microbiome interaction that shows an expansion of [Clostridium] asparagiforme in patients with RA compared with healthy controls."; "Haihe Wang, Hong Yu, Yongqun He"; "https://www.ncbi.nlm.nih.gov/pubmed/26214836/"; rdfs:label "expansion of [Clostridium] asparagiforme in RA human gut"@en . _:42de60 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:42de70 . _:42de70 a owl:Class; owl:intersectionOf _:42de80 . _:42de80 rdf:first ; rdf:rest _:42dea0 . _:42dea0 rdf:first _:42de90; rdf:rest _:42dec0 . _:42de90 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:42dec0 rdf:first _:42deb0; rdf:rest rdf:nil . _:42deb0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:42ded0 . _:42ded0 a owl:Class; owl:intersectionOf _:42dee0 . _:42dee0 rdf:first ; rdf:rest _:42df00 . _:42df00 rdf:first _:42def0; rdf:rest rdf:nil . _:42def0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:42df10 . _:42df10 a owl:Class; owl:intersectionOf _:42df20 . _:42df20 rdf:first ; rdf:rest _:42df40 . _:42df40 rdf:first _:42df30; rdf:rest rdf:nil . _:42df30 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:42df50 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:42df60 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; owl:equivalentClass _:42df70; rdfs:subClassOf , _:42e060; "A colorectal cancer human-gut microbiome interaction where B. fragilis is increased."; "YH, HW"; "https://www.ncbi.nlm.nih.gov/pubmed/24967088", "https://www.ncbi.nlm.nih.gov/pubmed/27810411"; rdfs:label "expansion of B. fragilis in colorectal cancer human gut"@en . _:42df70 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:42df80 . _:42df80 a owl:Class; owl:intersectionOf _:42df90 . _:42df90 rdf:first ; rdf:rest _:42dfb0 . _:42dfb0 rdf:first _:42dfa0; rdf:rest _:42dfd0 . _:42dfa0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:42dfd0 rdf:first _:42dfc0; rdf:rest rdf:nil . _:42dfc0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:42dfe0 . _:42dfe0 a owl:Class; owl:intersectionOf _:42dff0 . _:42dff0 rdf:first ; rdf:rest _:42e010 . _:42e010 rdf:first _:42e000; rdf:rest rdf:nil . _:42e000 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:42e020 . _:42e020 a owl:Class; owl:intersectionOf _:42e030 . _:42e030 rdf:first ; rdf:rest _:42e050 . _:42e050 rdf:first _:42e040; rdf:rest rdf:nil . _:42e040 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:42e060 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; owl:equivalentClass _:42e070; rdfs:subClassOf , _:42e160, _:42e170; "a RA human-gut microbiome interaction that shows an expansion of Eggerthella lenta in patients with RA compared with healthy controls."; "Haihe Wang, Hong Yu, Yongqun He"; "https://www.ncbi.nlm.nih.gov/pubmed/26214836/"; rdfs:label "expansion of Eggerthella lenta in RA human gut"@en . _:42e070 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:42e080 . _:42e080 a owl:Class; owl:intersectionOf _:42e090 . _:42e090 rdf:first ; rdf:rest _:42e0b0 . _:42e0b0 rdf:first _:42e0a0; rdf:rest _:42e0d0 . _:42e0a0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:42e0d0 rdf:first _:42e0c0; rdf:rest rdf:nil . _:42e0c0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:42e0e0 . _:42e0e0 a owl:Class; owl:intersectionOf _:42e0f0 . _:42e0f0 rdf:first ; rdf:rest _:42e110 . _:42e110 rdf:first _:42e100; rdf:rest rdf:nil . _:42e100 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:42e120 . _:42e120 a owl:Class; owl:intersectionOf _:42e130 . _:42e130 rdf:first ; rdf:rest _:42e150 . _:42e150 rdf:first _:42e140; rdf:rest rdf:nil . _:42e140 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:42e160 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:42e170 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf ; "A quality with a depleted quantity of a type of organism (e.g., bacteria inside human gut) in a patient with an acute disease compared with a patient control with the same disease but at a chronic stage."; "YH, HW, HY"; rdfs:label "decreased organism quantity in acute disease patient compared with chronic disease control"@en . a owl:Class; rdfs:subClassOf , _:42e180; "A host-microbiome interaction where the host is rattus."; "YH, HW"; rdfs:label "rat-microbiome interaction"@en . _:42e180 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:42e190 . _:42e190 a owl:Class; owl:intersectionOf _:42e1a0 . _:42e1a0 rdf:first ; rdf:rest _:42e1c0 . _:42e1c0 rdf:first _:42e1b0; rdf:rest rdf:nil . _:42e1b0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; owl:equivalentClass _:42e1d0; rdfs:subClassOf , _:42e2c0, _:42e2d0; "a RA human-gut microbiome interaction that shows an expansion of Bifidobacterium dentium in patients with RA compared with healthy controls."; "Haihe Wang, Hong Yu, Yongqun He"; "https://www.ncbi.nlm.nih.gov/pubmed/26214836/"; rdfs:label "expansion of Bifidobacterium dentium in RA human gut"@en . _:42e1d0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:42e1e0 . _:42e1e0 a owl:Class; owl:intersectionOf _:42e1f0 . _:42e1f0 rdf:first ; rdf:rest _:42e210 . _:42e210 rdf:first _:42e200; rdf:rest _:42e230 . _:42e200 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:42e230 rdf:first _:42e220; rdf:rest rdf:nil . _:42e220 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:42e240 . _:42e240 a owl:Class; owl:intersectionOf _:42e250 . _:42e250 rdf:first ; rdf:rest _:42e270 . _:42e270 rdf:first _:42e260; rdf:rest rdf:nil . _:42e260 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:42e280 . _:42e280 a owl:Class; owl:intersectionOf _:42e290 . _:42e290 rdf:first ; rdf:rest _:42e2b0 . _:42e2b0 rdf:first _:42e2a0; rdf:rest rdf:nil . _:42e2a0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:42e2c0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:42e2d0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; owl:equivalentClass _:42e2e0; rdfs:subClassOf , _:42e3d0, _:42e3e0; "a RA human-gut microbiome interaction that shows an expansion of Lactobacillus sp in patients with RA compared with healthy controls."; "Haihe Wang, Hong Yu, Yongqun He"; "https://www.ncbi.nlm.nih.gov/pubmed/26214836/"; rdfs:label "expansion of Lactobacillus sp in RA human gut"@en . _:42e2e0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:42e2f0 . _:42e2f0 a owl:Class; owl:intersectionOf _:42e300 . _:42e300 rdf:first ; rdf:rest _:42e320 . _:42e320 rdf:first _:42e310; rdf:rest _:42e340 . _:42e310 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:42e340 rdf:first _:42e330; rdf:rest rdf:nil . _:42e330 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:42e350 . _:42e350 a owl:Class; owl:intersectionOf _:42e360 . _:42e360 rdf:first ; rdf:rest _:42e380 . _:42e380 rdf:first _:42e370; rdf:rest rdf:nil . _:42e370 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:42e390 . _:42e390 a owl:Class; owl:intersectionOf _:42e3a0 . _:42e3a0 rdf:first ; rdf:rest _:42e3c0 . _:42e3c0 rdf:first _:42e3b0; rdf:rest rdf:nil . _:42e3b0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:42e3d0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:42e3e0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; owl:equivalentClass _:42e3f0; rdfs:subClassOf , _:42e4e0, _:42e4f0; "a RA human-gut microbiome interaction that shows an expansion of Ruminococcus lactaris in patients with chronic RA compared with healthy controls."; "Haihe Wang, Hong Yu, Yongqun He"; "https://www.ncbi.nlm.nih.gov/pubmed/26214836/"; rdfs:label "expansion of Ruminococcus lactaris in RA human gut"@en . _:42e3f0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:42e400 . _:42e400 a owl:Class; owl:intersectionOf _:42e410 . _:42e410 rdf:first ; rdf:rest _:42e430 . _:42e430 rdf:first _:42e420; rdf:rest _:42e450 . _:42e420 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:42e450 rdf:first _:42e440; rdf:rest rdf:nil . _:42e440 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:42e460 . _:42e460 a owl:Class; owl:intersectionOf _:42e470 . _:42e470 rdf:first ; rdf:rest _:42e490 . _:42e490 rdf:first _:42e480; 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rdf:rest rdf:nil . a owl:Class; rdfs:subClassOf ; "A quality with a depleted quantity of a type of organism (e.g., bacteria inside human gut) compared with a patient control with the fibromyalgia (FM) disease."; "YH, HW, HY"; rdfs:label "decreased organism quantity compared with fibromyalgia patients"@en . a owl:Class; rdfs:subClassOf , _:42e670; "A human gut-microbiome interaction that is associated with systemic lupus erythematosus (SLE)."; "Haihe Wang, Hong Yu, Yongqun He"; rdfs:label "SLE human-gut microbiome interaction"@en . _:42e670 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:42e680 . _:42e680 a owl:Class; owl:intersectionOf _:42e690 . _:42e690 rdf:first ; rdf:rest _:42e6b0 . _:42e6b0 rdf:first _:42e6a0; rdf:rest rdf:nil . _:42e6a0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:42e6c0; "A human-gut microbiome interaction that is associated with colorectal cancer."; "YH, HW"; rdfs:label "colorectal cancer human-gut microbiome interaction"@en . _:42e6c0 a owl:Restriction; 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rdf:rest _:42e870 . _:42e840 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:42e870 rdf:first _:42e860; rdf:rest rdf:nil . _:42e860 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:42e880 . _:42e880 a owl:Class; owl:intersectionOf _:42e890 . _:42e890 rdf:first ; rdf:rest _:42e8b0 . _:42e8b0 rdf:first _:42e8a0; rdf:rest rdf:nil . _:42e8a0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:42e8c0 . _:42e8c0 a owl:Class; owl:intersectionOf _:42e8d0 . _:42e8d0 rdf:first ; rdf:rest _:42e8f0 . _:42e8f0 rdf:first _:42e8e0; rdf:rest rdf:nil . _:42e8e0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:42e900 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; owl:equivalentClass _:42e910; rdfs:subClassOf , _:42ea00, _:42ea10; "a RA human-gut microbiome interaction that shows an expansion of Porphyromonas gingivalis in patients with RA compared with healthy controls."; "Haihe Wang, Hong Yu, Yongqun He"; "https://www.ncbi.nlm.nih.gov/pubmed/20436074 /", "https://www.ncbi.nlm.nih.gov/pubmed/24873878/"; 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rdfs:label "expansion of Porphyromonas gingivalis in RA human oral cavity"@en . _:42ec30 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:42ec40 . _:42ec40 a owl:Class; owl:intersectionOf _:42ec50 . _:42ec50 rdf:first ; rdf:rest _:42ec70 . _:42ec70 rdf:first _:42ec60; rdf:rest _:42ec90 . _:42ec60 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:42ec90 rdf:first _:42ec80; rdf:rest rdf:nil . _:42ec80 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:42eca0 . _:42eca0 a owl:Class; owl:intersectionOf _:42ecb0 . _:42ecb0 rdf:first ; rdf:rest _:42ecd0 . _:42ecd0 rdf:first _:42ecc0; rdf:rest rdf:nil . _:42ecc0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:42ece0 . _:42ece0 a owl:Class; owl:intersectionOf _:42ecf0 . _:42ecf0 rdf:first ; rdf:rest _:42ed10 . _:42ed10 rdf:first _:42ed00; rdf:rest rdf:nil . _:42ed00 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:42ed20 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:42ed30 a owl:Restriction; 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owl:onProperty ; owl:someValuesFrom _:42edf0 . _:42edf0 a owl:Class; owl:intersectionOf _:42ee00 . _:42ee00 rdf:first ; rdf:rest _:42ee20 . _:42ee20 rdf:first _:42ee10; rdf:rest rdf:nil . _:42ee10 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:42ee30 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:42ee40 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; owl:equivalentClass _:42ee50; rdfs:subClassOf , _:42ef40, _:42ef50; "a RA human-gut microbiome interaction that shows an expansion of Collinsella aerofaciens in patients with RA compared with healthy controls."; "Haihe Wang, Hong Yu, Yongqun He"; "https://www.ncbi.nlm.nih.gov/pubmed/27102666/"; rdfs:label "expansion of Collinsella aerofaciens in RA human gut"@en . _:42ee50 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:42ee60 . _:42ee60 a owl:Class; owl:intersectionOf _:42ee70 . _:42ee70 rdf:first ; rdf:rest _:42ee90 . _:42ee90 rdf:first _:42ee80; rdf:rest _:42eeb0 . _:42ee80 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:42eeb0 rdf:first _:42eea0; rdf:rest rdf:nil . _:42eea0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:42eec0 . _:42eec0 a owl:Class; owl:intersectionOf _:42eed0 . _:42eed0 rdf:first ; rdf:rest _:42eef0 . _:42eef0 rdf:first _:42eee0; rdf:rest rdf:nil . _:42eee0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:42ef00 . _:42ef00 a owl:Class; owl:intersectionOf _:42ef10 . _:42ef10 rdf:first ; rdf:rest _:42ef30 . _:42ef30 rdf:first _:42ef20; rdf:rest rdf:nil . _:42ef20 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:42ef40 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:42ef50 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:42ef60; "A human gut-microbiome interaction that is associated with the diarrhea disease"; "YH"; rdfs:label "diarrheal patient-gut microbiome interaction"@en . _:42ef60 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:42ef70 . _:42ef70 a owl:Class; 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owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:42fdf0; "A human oral cavity microbiome interaction that is associated with rheumatoid arthritis (RA)."; "YH"; rdfs:label "RA human oral cavity microbiome interaction"@en . _:42fdf0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:42fe00 . _:42fe00 a owl:Class; owl:intersectionOf _:42fe10 . _:42fe10 rdf:first ; rdf:rest _:42fe30 . _:42fe30 rdf:first _:42fe20; rdf:rest rdf:nil . _:42fe20 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; owl:equivalentClass _:42fe40; rdfs:subClassOf , _:42ff30, _:42ff40; "a RA human oral cavity microbiome interaction that shows an decrease of Haemophilus in patients with RA compared with healthy controls."; "Haihe Wang, Hong Yu, Yongqun He"; "https://www.ncbi.nlm.nih.gov/pubmed/?term=26214836"; rdfs:label "depletion of Haemophilus in RA human oral cavity"@en . _:42fe40 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:42fe50 . _:42fe50 a owl:Class; owl:intersectionOf _:42fe60 . _:42fe60 rdf:first ; 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"Haihe Wang, Hong Yu, Yongqun He"; "https://www.ncbi.nlm.nih.gov/pubmed/28376066/"; rdfs:label "expansion of Actinobacteria in RA human gut"@en . _:42ff50 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:42ff60 . _:42ff60 a owl:Class; owl:intersectionOf _:42ff70 . _:42ff70 rdf:first ; rdf:rest _:42ff90 . _:42ff90 rdf:first _:42ff80; rdf:rest _:42ffb0 . _:42ff80 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:42ffb0 rdf:first _:42ffa0; rdf:rest rdf:nil . _:42ffa0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:42ffc0 . _:42ffc0 a owl:Class; owl:intersectionOf _:42ffd0 . _:42ffd0 rdf:first ; rdf:rest _:42fff0 . _:42fff0 rdf:first _:42ffe0; rdf:rest rdf:nil . _:42ffe0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:430000 . _:430000 a owl:Class; owl:intersectionOf _:430010 . _:430010 rdf:first ; rdf:rest _:430030 . _:430030 rdf:first _:430020; rdf:rest rdf:nil . _:430020 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:430040 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:430050 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; owl:equivalentClass _:430060; rdfs:subClassOf , _:430150, _:430160; "a RA human oral cavity microbiome interaction that shows an decrease of Cardiobacterium in patients with RA compared with healthy controls."; "Haihe Wang, Hong Yu, Yongqun He"; "https://www.ncbi.nlm.nih.gov/pubmed/?term=26214836"; rdfs:label "depletion of Cardiobacterium in RA human oral cavity"@en . _:430060 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:430070 . _:430070 a owl:Class; owl:intersectionOf _:430080 . _:430080 rdf:first ; rdf:rest _:4300a0 . _:4300a0 rdf:first _:430090; rdf:rest _:4300c0 . _:430090 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:4300c0 rdf:first _:4300b0; rdf:rest rdf:nil . _:4300b0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:4300d0 . _:4300d0 a owl:Class; owl:intersectionOf _:4300e0 . _:4300e0 rdf:first ; rdf:rest _:430100 . _:430100 rdf:first _:4300f0; rdf:rest rdf:nil . _:4300f0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:430110 . _:430110 a owl:Class; owl:intersectionOf _:430120 . _:430120 rdf:first ; rdf:rest _:430140 . _:430140 rdf:first _:430130; rdf:rest rdf:nil . _:430130 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:430150 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:430160 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; owl:equivalentClass _:430170; rdfs:subClassOf , _:430260, _:430270; "a RA human oral cavity microbiome interaction that shows an decrease of Eikenella in patients with RA compared with healthy controls."; "Haihe Wang, Hong Yu, Yongqun He"; "https://www.ncbi.nlm.nih.gov/pubmed/?term=26214836"; rdfs:label "depletion of Eikenella in RA human oral cavity"@en . _:430170 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:430180 . _:430180 a owl:Class; owl:intersectionOf _:430190 . _:430190 rdf:first ; rdf:rest _:4301b0 . _:4301b0 rdf:first _:4301a0; rdf:rest _:4301d0 . _:4301a0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:4301d0 rdf:first _:4301c0; rdf:rest rdf:nil . _:4301c0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:4301e0 . _:4301e0 a owl:Class; owl:intersectionOf _:4301f0 . _:4301f0 rdf:first ; rdf:rest _:430210 . _:430210 rdf:first _:430200; rdf:rest rdf:nil . _:430200 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:430220 . _:430220 a owl:Class; owl:intersectionOf _:430230 . _:430230 rdf:first ; rdf:rest _:430250 . _:430250 rdf:first _:430240; rdf:rest rdf:nil . _:430240 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:430260 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:430270 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; owl:equivalentClass _:430280; rdfs:subClassOf , _:430370, _:430380; "a RA human oral cavity microbiome interaction that shows an expansion of Kingella in patients with RA compared with healthy controls."; "Haihe Wang, Hong Yu, Yongqun He"; "https://www.ncbi.nlm.nih.gov/pubmed/?term=26214836"; rdfs:label "depletion of Kingella in RA human oral cavity"@en . _:430280 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:430290 . _:430290 a owl:Class; owl:intersectionOf _:4302a0 . _:4302a0 rdf:first ; rdf:rest _:4302c0 . _:4302c0 rdf:first _:4302b0; rdf:rest _:4302e0 . _:4302b0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:4302e0 rdf:first _:4302d0; rdf:rest rdf:nil . _:4302d0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:4302f0 . _:4302f0 a owl:Class; owl:intersectionOf _:430300 . _:430300 rdf:first ; rdf:rest _:430320 . _:430320 rdf:first _:430310; rdf:rest rdf:nil . _:430310 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:430330 . _:430330 a owl:Class; owl:intersectionOf _:430340 . _:430340 rdf:first ; rdf:rest _:430360 . _:430360 rdf:first _:430350; rdf:rest rdf:nil . _:430350 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:430370 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:430380 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; owl:equivalentClass _:430390; rdfs:subClassOf , _:430480, _:430490; "a RA human oral cavity microbiome interaction that shows an expansion of Rothia aeria in patients with RA compared with healthy controls."; "Haihe Wang, Hong Yu, Yongqun He"; "https://www.ncbi.nlm.nih.gov/pubmed/?term=26214836"; rdfs:label "depletion of Rothia aeria in RA human oral cavity"@en . _:430390 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:4303a0 . _:4303a0 a owl:Class; owl:intersectionOf _:4303b0 . _:4303b0 rdf:first ; rdf:rest _:4303d0 . _:4303d0 rdf:first _:4303c0; rdf:rest _:4303f0 . _:4303c0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:4303f0 rdf:first _:4303e0; rdf:rest rdf:nil . _:4303e0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:430400 . _:430400 a owl:Class; owl:intersectionOf _:430410 . _:430410 rdf:first ; rdf:rest _:430430 . _:430430 rdf:first _:430420; rdf:rest rdf:nil . _:430420 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:430440 . _:430440 a owl:Class; owl:intersectionOf _:430450 . _:430450 rdf:first ; rdf:rest _:430470 . _:430470 rdf:first _:430460; rdf:rest rdf:nil . _:430460 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:430480 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:430490 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; owl:equivalentClass _:4304a0; rdfs:subClassOf , _:430570; "a diarrheal patient-gut microbiome interaction that shows an decrease of Prevotella in patients in the gut of human diarrheal patient compared with healthy controls."; "YH"; "http://microbiomedb.org/mbio/app/"; rdfs:label "depletion of Prevotella in diarrheal patient gut"@en . _:4304a0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:4304b0 . _:4304b0 a owl:Class; owl:intersectionOf _:4304c0 . _:4304c0 rdf:first ; rdf:rest _:4304e0 . _:4304e0 rdf:first _:4304d0; rdf:rest rdf:nil . _:4304d0 a owl:Class; owl:intersectionOf _:430500 . _:430500 rdf:first _:4304f0; rdf:rest _:430560 . _:4304f0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:430510 . _:430510 a owl:Class; owl:intersectionOf _:430520 . _:430520 rdf:first ; rdf:rest _:430540 . _:430540 rdf:first _:430530; rdf:rest rdf:nil . _:430530 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:430560 rdf:first _:430550; rdf:rest rdf:nil . _:430550 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:430570 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; owl:equivalentClass _:430580; rdfs:subClassOf , _:430670, _:430680; "a RA human-gut microbiome interaction that shows an expansion of Prevotella copri in patients with RA compared with healthy controls."; "Haihe Wang, Hong Yu, Yongqun He"; "https://www.ncbi.nlm.nih.gov/pubmed/27333153"; rdfs:label "expansion of Prevotella copri in RA human gut"@en . _:430580 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:430590 . _:430590 a owl:Class; owl:intersectionOf _:4305a0 . _:4305a0 rdf:first ; rdf:rest _:4305c0 . _:4305c0 rdf:first _:4305b0; rdf:rest _:4305e0 . _:4305b0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:4305e0 rdf:first _:4305d0; rdf:rest rdf:nil . _:4305d0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:4305f0 . _:4305f0 a owl:Class; owl:intersectionOf _:430600 . _:430600 rdf:first ; rdf:rest _:430620 . _:430620 rdf:first _:430610; rdf:rest rdf:nil . _:430610 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:430630 . _:430630 a owl:Class; owl:intersectionOf _:430640 . _:430640 rdf:first ; rdf:rest _:430660 . _:430660 rdf:first _:430650; rdf:rest rdf:nil . _:430650 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:430670 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:430680 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; owl:equivalentClass _:430690; rdfs:subClassOf , _:430780, _:430790; "a RA human oral cavity microbiome interaction that shows an decrease of Haemophilus sp in patients with RA compared with healthy controls."; "Haihe Wang, Hong Yu, Yongqun He"; "https://www.ncbi.nlm.nih.gov/pubmed/?term=26214836"; rdfs:label "depletion of Haemophilus spp. in RA human oral cavity"@en . _:430690 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:4306a0 . _:4306a0 a owl:Class; owl:intersectionOf _:4306b0 . _:4306b0 rdf:first ; rdf:rest _:4306d0 . _:4306d0 rdf:first _:4306c0; rdf:rest _:4306f0 . _:4306c0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:4306f0 rdf:first _:4306e0; rdf:rest rdf:nil . _:4306e0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:430700 . _:430700 a owl:Class; owl:intersectionOf _:430710 . _:430710 rdf:first ; rdf:rest _:430730 . _:430730 rdf:first _:430720; rdf:rest rdf:nil . _:430720 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:430740 . _:430740 a owl:Class; owl:intersectionOf _:430750 . _:430750 rdf:first ; rdf:rest _:430770 . _:430770 rdf:first _:430760; rdf:rest rdf:nil . _:430760 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:430780 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:430790 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; owl:equivalentClass _:4307a0 . _:4307a0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:4307b0 . _:4307b0 a owl:Class; owl:intersectionOf _:4307c0 . _:4307c0 rdf:first ; rdf:rest _:4307e0 . _:4307e0 rdf:first _:4307d0; rdf:rest _:430800 . _:4307d0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:430800 rdf:first _:4307f0; rdf:rest rdf:nil . _:4307f0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:430810 . _:430810 a owl:Class; owl:intersectionOf _:430820 . _:430820 rdf:first ; rdf:rest _:430840 . _:430840 rdf:first _:430830; rdf:rest rdf:nil . _:430830 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:430850 . _:430850 a owl:Class; owl:intersectionOf _:430860 . _:430860 rdf:first ; rdf:rest _:430880 . _:430880 rdf:first _:430870; rdf:rest rdf:nil . _:430870 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . rdfs:subClassOf , _:430890, _:4308a0; "a RA human oral cavity microbiome interaction that shows an increase of Cryptobacterium curtum in patients with RA compared with healthy controls."; "Haihe Wang, Hong Yu, Yongqun He"; "https://www.ncbi.nlm.nih.gov/pubmed/?term=26214836"; rdfs:label "expansion of Cryptobacterium curtum in RA human oral cavity"@en . _:430890 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:4308a0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; owl:equivalentClass _:4308b0; rdfs:subClassOf , _:4309a0, _:4309b0; "a RA human oral cavity microbiome interaction that shows an expansion of Veillonella in patients with RA compared with healthy controls."; "Haihe Wang, Hong Yu, Yongqun He"; "https://www.ncbi.nlm.nih.gov/pubmed/?term=26214836"; rdfs:label "expansion of Veillonella in RA human oral cavity"@en . _:4308b0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:4308c0 . _:4308c0 a owl:Class; owl:intersectionOf _:4308d0 . _:4308d0 rdf:first ; rdf:rest _:4308f0 . _:4308f0 rdf:first _:4308e0; rdf:rest _:430910 . _:4308e0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:430910 rdf:first _:430900; rdf:rest rdf:nil . _:430900 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:430920 . _:430920 a owl:Class; owl:intersectionOf _:430930 . _:430930 rdf:first ; rdf:rest _:430950 . _:430950 rdf:first _:430940; rdf:rest rdf:nil . _:430940 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:430960 . _:430960 a owl:Class; owl:intersectionOf _:430970 . _:430970 rdf:first ; rdf:rest _:430990 . _:430990 rdf:first _:430980; rdf:rest rdf:nil . _:430980 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:4309a0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:4309b0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:4309c0; "An interaction between rattus and gut microbiome."; "YH"; rdfs:label "rat gut microbiome interaction"@en . _:4309c0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:4309d0 . _:4309d0 a owl:Class; owl:intersectionOf _:4309e0 . _:4309e0 rdf:first ; rdf:rest _:430a00 . _:430a00 rdf:first _:4309f0; rdf:rest rdf:nil . _:4309f0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; owl:equivalentClass _:430a10; rdfs:subClassOf , _:430b00, _:430b10; "a RA human-gut microbiome interaction that shows an expansion of Escherichia coli in patients with RA compared with healthy controls."; "Haihe Wang, Hong Yu, Yongqun He"; "https://www.ncbi.nlm.nih.gov/pubmed/20360042/"; rdfs:label "expansion of Escherichia coli in RA human gut"@en . _:430a10 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:430a20 . _:430a20 a owl:Class; owl:intersectionOf _:430a30 . _:430a30 rdf:first ; rdf:rest _:430a50 . _:430a50 rdf:first _:430a40; rdf:rest _:430a70 . _:430a40 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:430a70 rdf:first _:430a60; rdf:rest rdf:nil . _:430a60 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:430a80 . _:430a80 a owl:Class; owl:intersectionOf _:430a90 . _:430a90 rdf:first ; rdf:rest _:430ab0 . _:430ab0 rdf:first _:430aa0; rdf:rest rdf:nil . _:430aa0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:430ac0 . _:430ac0 a owl:Class; owl:intersectionOf _:430ad0 . _:430ad0 rdf:first ; rdf:rest _:430af0 . _:430af0 rdf:first _:430ae0; rdf:rest rdf:nil . _:430ae0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:430b00 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:430b10 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; owl:equivalentClass _:430b20; rdfs:subClassOf , _:430c10, _:430c20; "a SLE human oral cavity microbiome interaction that shows an decrease of Clostridiales in patients with SLE compared with healthy controls."; "Haihe Wang, Hong Yu, Yongqun He"; "https://www.ncbi.nlm.nih.gov/pubmed/?term=28320468"; rdfs:label "depletion of Clostridiales in SLE human oral cavity"@en . _:430b20 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:430b30 . _:430b30 a owl:Class; owl:intersectionOf _:430b40 . _:430b40 rdf:first ; rdf:rest _:430b60 . _:430b60 rdf:first _:430b50; rdf:rest _:430b80 . _:430b50 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:430b80 rdf:first _:430b70; rdf:rest rdf:nil . _:430b70 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:430b90 . _:430b90 a owl:Class; owl:intersectionOf _:430ba0 . _:430ba0 rdf:first ; rdf:rest _:430bc0 . _:430bc0 rdf:first _:430bb0; rdf:rest rdf:nil . _:430bb0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:430bd0 . _:430bd0 a owl:Class; owl:intersectionOf _:430be0 . _:430be0 rdf:first ; rdf:rest _:430c00 . _:430c00 rdf:first _:430bf0; rdf:rest rdf:nil . _:430bf0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:430c10 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:430c20 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; owl:equivalentClass _:430c30; rdfs:subClassOf , _:430d20, _:430d30; "a RA human-gut microbiome interaction that shows an decrease of Faecalibacterium in patients with RA compared with healthy controls."; "Haihe Wang, Hong Yu, Yongqun He"; "https://www.ncbi.nlm.nih.gov/pubmed/?term=27333153"; rdfs:label "depletion of Faecalibacterium in RA human gut"@en . _:430c30 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:430c40 . _:430c40 a owl:Class; owl:intersectionOf _:430c50 . _:430c50 rdf:first ; rdf:rest _:430c70 . _:430c70 rdf:first _:430c60; rdf:rest _:430c90 . _:430c60 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:430c90 rdf:first _:430c80; rdf:rest rdf:nil . _:430c80 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:430ca0 . _:430ca0 a owl:Class; owl:intersectionOf _:430cb0 . _:430cb0 rdf:first ; rdf:rest _:430cd0 . _:430cd0 rdf:first _:430cc0; rdf:rest rdf:nil . _:430cc0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:430ce0 . _:430ce0 a owl:Class; owl:intersectionOf _:430cf0 . _:430cf0 rdf:first ; rdf:rest _:430d10 . _:430d10 rdf:first _:430d00; rdf:rest rdf:nil . _:430d00 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:430d20 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:430d30 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:430d40; "A human gut-microbiome interaction that is associated with ankylosing spondylitis (AS)."; "Haihe Wang, Hong Yu, Yongqun He"; rdfs:label "AS human-gut microbiome interaction"@en . _:430d40 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:430d50 . _:430d50 a owl:Class; owl:intersectionOf _:430d60 . _:430d60 rdf:first ; rdf:rest _:430d80 . _:430d80 rdf:first _:430d70; rdf:rest rdf:nil . _:430d70 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; owl:equivalentClass _:430d90; rdfs:subClassOf , _:430e80, _:430e90; "an AS human-gut microbiome interaction that shows an expansion of Ruminococcaceae in patients with AS compared with healthy controls."; "Haihe Wang, Hong Yu, Yongqun He"; "https://www.ncbi.nlm.nih.gov/pubmed/25417597/", "https://www.ncbi.nlm.nih.gov/pubmed/26362739/"; rdfs:label "expansion of Ruminococcaceae in AS human gut"@en . _:430d90 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:430da0 . _:430da0 a owl:Class; owl:intersectionOf _:430db0 . _:430db0 rdf:first ; rdf:rest _:430dd0 . _:430dd0 rdf:first _:430dc0; rdf:rest _:430df0 . _:430dc0 a owl:Restriction; 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rdfs:label "expansion of Lachnospiraceae in AS human gut"@en . _:430ea0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:430eb0 . _:430eb0 a owl:Class; owl:intersectionOf _:430ec0 . _:430ec0 rdf:first ; rdf:rest _:430ee0 . _:430ee0 rdf:first _:430ed0; rdf:rest _:430f00 . _:430ed0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:430f00 rdf:first _:430ef0; rdf:rest rdf:nil . _:430ef0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:430f10 . _:430f10 a owl:Class; owl:intersectionOf _:430f20 . _:430f20 rdf:first ; rdf:rest _:430f40 . _:430f40 rdf:first _:430f30; rdf:rest rdf:nil . _:430f30 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:430f50 . _:430f50 a owl:Class; owl:intersectionOf _:430f60 . _:430f60 rdf:first ; rdf:rest _:430f80 . _:430f80 rdf:first _:430f70; rdf:rest rdf:nil . _:430f70 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:430f90 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:430fa0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; owl:equivalentClass _:430fb0; rdfs:subClassOf , _:4310a0, _:4310b0; "an AS human-gut microbiome interaction that shows an expansion of Bacteroidaceae in patients with AS compared with healthy controls."; "Haihe Wang, Hong Yu, Yongqun He"; "https://www.ncbi.nlm.nih.gov/pubmed/25417597/"; rdfs:label "expansion of Bacteroidaceae in AS human gut"@en . _:430fb0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:430fc0 . _:430fc0 a owl:Class; owl:intersectionOf _:430fd0 . _:430fd0 rdf:first ; rdf:rest _:430ff0 . _:430ff0 rdf:first _:430fe0; rdf:rest _:431010 . _:430fe0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:431010 rdf:first _:431000; rdf:rest rdf:nil . _:431000 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:431020 . _:431020 a owl:Class; owl:intersectionOf _:431030 . _:431030 rdf:first ; rdf:rest _:431050 . _:431050 rdf:first _:431040; rdf:rest rdf:nil . _:431040 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:431060 . _:431060 a owl:Class; owl:intersectionOf _:431070 . _:431070 rdf:first ; rdf:rest _:431090 . _:431090 rdf:first _:431080; rdf:rest rdf:nil . _:431080 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:4310a0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:4310b0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; owl:equivalentClass _:4310c0; rdfs:subClassOf , _:4311b0, _:4311c0; "an AS human-gut microbiome interaction that shows an expansion of Prevotellaceae in patients with AS compared with healthy controls."; "Haihe Wang, Hong Yu, Yongqun He"; "https://www.ncbi.nlm.nih.gov/pubmed/25417597/"; rdfs:label "expansion of Prevotellaceae in AS human gut"@en . _:4310c0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:4310d0 . _:4310d0 a owl:Class; owl:intersectionOf _:4310e0 . _:4310e0 rdf:first ; rdf:rest _:431100 . _:431100 rdf:first _:4310f0; rdf:rest _:431120 . _:4310f0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:431120 rdf:first _:431110; rdf:rest rdf:nil . _:431110 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:431130 . _:431130 a owl:Class; owl:intersectionOf _:431140 . _:431140 rdf:first ; rdf:rest _:431160 . _:431160 rdf:first _:431150; rdf:rest rdf:nil . _:431150 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:431170 . _:431170 a owl:Class; owl:intersectionOf _:431180 . _:431180 rdf:first ; rdf:rest _:4311a0 . _:4311a0 rdf:first _:431190; rdf:rest rdf:nil . _:431190 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:4311b0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:4311c0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; owl:equivalentClass _:4311d0; rdfs:subClassOf , _:4312c0, _:4312d0; "an AS human-gut microbiome interaction that shows an expansion of rare taxa,Veillonellaceae in patients with AS compared with healthy controls."; "Haihe Wang, Hong Yu, Yongqun He"; "https://www.ncbi.nlm.nih.gov/pubmed/25417597/", "https://www.ncbi.nlm.nih.gov/pubmed/25434931/", "https://www.ncbi.nlm.nih.gov/pubmed/26331579/"; rdfs:label "expansion of Veillonellaceae in AS human gut"@en . _:4311d0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:4311e0 . _:4311e0 a owl:Class; owl:intersectionOf _:4311f0 . _:4311f0 rdf:first ; rdf:rest _:431210 . _:431210 rdf:first _:431200; rdf:rest _:431230 . _:431200 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:431230 rdf:first _:431220; rdf:rest rdf:nil . _:431220 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:431240 . _:431240 a owl:Class; owl:intersectionOf _:431250 . _:431250 rdf:first ; rdf:rest _:431270 . _:431270 rdf:first _:431260; rdf:rest rdf:nil . _:431260 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:431280 . _:431280 a owl:Class; owl:intersectionOf _:431290 . _:431290 rdf:first ; rdf:rest _:4312b0 . _:4312b0 rdf:first _:4312a0; rdf:rest rdf:nil . _:4312a0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:4312c0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:4312d0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; owl:equivalentClass _:4312e0; rdfs:subClassOf , _:4313d0, _:4313e0; "an AS human-gut microbiome interaction that shows an expansion of Klebsiella pneumoniae in patients with AS compared with healthy controls."; "Haihe Wang, Hong Yu, Yongqun He"; "https://www.ncbi.nlm.nih.gov/pubmed/1001180/"; rdfs:label "expansion of Klebsiella pneumoniae in AS human gut"@en . _:4312e0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:4312f0 . _:4312f0 a owl:Class; owl:intersectionOf _:431300 . _:431300 rdf:first ; rdf:rest _:431320 . _:431320 rdf:first _:431310; rdf:rest _:431340 . _:431310 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:431340 rdf:first _:431330; rdf:rest rdf:nil . _:431330 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:431350 . _:431350 a owl:Class; owl:intersectionOf _:431360 . _:431360 rdf:first ; rdf:rest _:431380 . _:431380 rdf:first _:431370; rdf:rest rdf:nil . _:431370 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:431390 . _:431390 a owl:Class; owl:intersectionOf _:4313a0 . _:4313a0 rdf:first ; rdf:rest _:4313c0 . _:4313c0 rdf:first _:4313b0; rdf:rest rdf:nil . _:4313b0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:4313d0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:4313e0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:4313f0; "A human oral cavity microbiome interaction that is associated with ankylosing spondylitis (AS)."; "YH"; rdfs:label "AS human oral cavity microbiome interaction"@en . _:4313f0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:431400 . _:431400 a owl:Class; owl:intersectionOf _:431410 . _:431410 rdf:first ; rdf:rest _:431430 . _:431430 rdf:first _:431420; rdf:rest rdf:nil . _:431420 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; owl:equivalentClass _:431440; rdfs:subClassOf , _:431530, _:431540; "an AS human oral cavity microbiome interaction that shows an expansion of Klebsiella pneumoniae in patients with AS compared with healthy controls."; "Haihe Wang, Hong Yu, Yongqun He"; "https://www.ncbi.nlm.nih.gov/pubmed/17458395/"; rdfs:label "expansion of Klebsiella pneumoniae in AS human oral cavity"@en . _:431440 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:431450 . _:431450 a owl:Class; owl:intersectionOf _:431460 . _:431460 rdf:first ; rdf:rest _:431480 . _:431480 rdf:first _:431470; rdf:rest _:4314a0 . _:431470 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:4314a0 rdf:first _:431490; rdf:rest rdf:nil . _:431490 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:4314b0 . _:4314b0 a owl:Class; owl:intersectionOf _:4314c0 . _:4314c0 rdf:first ; rdf:rest _:4314e0 . _:4314e0 rdf:first _:4314d0; rdf:rest rdf:nil . _:4314d0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:4314f0 . _:4314f0 a owl:Class; owl:intersectionOf _:431500 . _:431500 rdf:first ; rdf:rest _:431520 . _:431520 rdf:first _:431510; rdf:rest rdf:nil . _:431510 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:431530 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:431540 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; owl:equivalentClass _:431550; rdfs:subClassOf , _:431640, _:431650; "an AS human oral cavity microbiome interaction that shows an expansion of Prevotella intermedia in patients with AS compared with healthy controls."; "Haihe Wang, Hong Yu, Yongqun He"; "https://www.ncbi.nlm.nih.gov/pubmed/26002454/"; rdfs:label "expansion of Prevotella intermedia in AS human oral cavity"@en . _:431550 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:431560 . _:431560 a owl:Class; owl:intersectionOf _:431570 . _:431570 rdf:first ; rdf:rest _:431590 . _:431590 rdf:first _:431580; rdf:rest _:4315b0 . _:431580 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:4315b0 rdf:first _:4315a0; rdf:rest rdf:nil . _:4315a0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:4315c0 . _:4315c0 a owl:Class; owl:intersectionOf _:4315d0 . _:4315d0 rdf:first ; rdf:rest _:4315f0 . _:4315f0 rdf:first _:4315e0; rdf:rest rdf:nil . _:4315e0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:431600 . _:431600 a owl:Class; owl:intersectionOf _:431610 . _:431610 rdf:first ; rdf:rest _:431630 . _:431630 rdf:first _:431620; rdf:rest rdf:nil . _:431620 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:431640 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:431650 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; owl:equivalentClass _:431660; rdfs:subClassOf , _:431750, _:431760; "an AS human oral cavity microbiome interaction that shows an expansion of rare taxa,Tannerella forsythia in patients with AS compared with healthy controls."; "Haihe Wang, Hong Yu, Yongqun He"; "https://www.ncbi.nlm.nih.gov/pubmed/26002454/"; rdfs:label "expansion of Tannerella forsythia in AS human oral cavity"@en . _:431660 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:431670 . _:431670 a owl:Class; owl:intersectionOf _:431680 . _:431680 rdf:first ; rdf:rest _:4316a0 . _:4316a0 rdf:first _:431690; rdf:rest _:4316c0 . _:431690 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:4316c0 rdf:first _:4316b0; rdf:rest rdf:nil . _:4316b0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:4316d0 . _:4316d0 a owl:Class; owl:intersectionOf _:4316e0 . _:4316e0 rdf:first ; rdf:rest _:431700 . _:431700 rdf:first _:4316f0; rdf:rest rdf:nil . _:4316f0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:431710 . _:431710 a owl:Class; owl:intersectionOf _:431720 . _:431720 rdf:first ; rdf:rest _:431740 . _:431740 rdf:first _:431730; rdf:rest rdf:nil . _:431730 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:431750 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:431760 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:431770; "A rattus gut-microbiome interaction that is associated with ankylosing spondylitis (AS)."; "Haihe Wang, Hong Yu, Yongqun He"; "association of rat gut microbiota with ankylosing spondylitis"@en; rdfs:label "AS rat-gut microbiome interaction" . _:431770 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:431780 . _:431780 a owl:Class; owl:intersectionOf _:431790 . _:431790 rdf:first ; rdf:rest _:4317b0 . _:4317b0 rdf:first _:4317a0; rdf:rest rdf:nil . _:4317a0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; owl:equivalentClass _:4317c0; rdfs:subClassOf , _:4318b0, _:4318c0; "a SLE human oral cavity microbiome interaction that shows an expansion of Prevotella in patients with SLE compared with healthy controls."; "Haihe Wang, Hong Yu, Yongqun He"; "https://www.ncbi.nlm.nih.gov/pubmed/28320468/"; rdfs:label "expansion of Prevotella in SLE human oral cavity"@en . _:4317c0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:4317d0 . _:4317d0 a owl:Class; owl:intersectionOf _:4317e0 . _:4317e0 rdf:first ; rdf:rest _:431800 . _:431800 rdf:first _:4317f0; rdf:rest _:431820 . _:4317f0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:431820 rdf:first _:431810; rdf:rest rdf:nil . _:431810 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:431830 . _:431830 a owl:Class; owl:intersectionOf _:431840 . _:431840 rdf:first ; rdf:rest _:431860 . _:431860 rdf:first _:431850; rdf:rest rdf:nil . _:431850 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:431870 . _:431870 a owl:Class; owl:intersectionOf _:431880 . _:431880 rdf:first ; rdf:rest _:4318a0 . _:4318a0 rdf:first _:431890; rdf:rest rdf:nil . _:431890 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:4318b0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:4318c0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; owl:equivalentClass _:4318d0; rdfs:subClassOf , _:4319c0, _:4319d0; "a SLE human-gut microbiome interaction that shows an decrease of Firmicutes in patients with SLEcompared with healthy controls."; "Haihe Wang, Hong Yu, Yongqun He"; "https://www.ncbi.nlm.nih.gov/pubmed/?term=28167944"; rdfs:label "depletion of Firmicutes in SLE human gut"@en . _:4318d0 a owl:Restriction; 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"a SLE human-gut microbiome interaction that shows an expansion of Bacteroidetes in patients with SLE compared with healthy controls."; "Haihe Wang, Hong Yu, Yongqun He"; "https://www.ncbi.nlm.nih.gov/pubmed/25271284/"; rdfs:label "expansion of Bacteroidetes in SLE human gut"@en . _:4319e0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:4319f0 . _:4319f0 a owl:Class; owl:intersectionOf _:431a00 . _:431a00 rdf:first ; rdf:rest _:431a20 . _:431a20 rdf:first _:431a10; rdf:rest _:431a40 . _:431a10 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:431a40 rdf:first _:431a30; rdf:rest rdf:nil . _:431a30 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:431a50 . _:431a50 a owl:Class; owl:intersectionOf _:431a60 . _:431a60 rdf:first ; rdf:rest _:431a80 . _:431a80 rdf:first _:431a70; rdf:rest rdf:nil . _:431a70 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:431a90 . _:431a90 a owl:Class; owl:intersectionOf _:431aa0 . _:431aa0 rdf:first ; rdf:rest _:431ac0 . _:431ac0 rdf:first _:431ab0; 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"Haihe Wang, Hong Yu, Yongqun He"; "https://www.ncbi.nlm.nih.gov/pubmed/28270806/"; rdfs:label "expansion of Bacteroides in gout human gut"@en . _:431d40 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:431d50 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; owl:equivalentClass _:431d60; rdfs:subClassOf , _:431e50, _:431e60; "a Gout human-gut microbiome interaction that shows an expansion of Bacteroidales in patients with gout compared with healthy controls."; "Haihe Wang, Hong Yu, Yongqun He"; "https://www.ncbi.nlm.nih.gov/pubmed/28270806/"; rdfs:label "expansion of Bacteroidales in gout human gut"@en . _:431d60 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:431d70 . _:431d70 a owl:Class; owl:intersectionOf _:431d80 . _:431d80 rdf:first ; rdf:rest _:431da0 . _:431da0 rdf:first _:431d90; rdf:rest _:431dc0 . _:431d90 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:431dc0 rdf:first _:431db0; rdf:rest rdf:nil . _:431db0 a owl:Restriction; 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"a Gout human-gut microbiome interaction that shows an expansion of Bacteroidaceae in patients with gout compared with healthy controls."; "Haihe Wang, Hong Yu, Yongqun He"; "https://www.ncbi.nlm.nih.gov/pubmed/28270806/"; rdfs:label "expansion of Bacteroidaceae in gout human gut"@en . _:431f80 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:431f90 . _:431f90 a owl:Class; owl:intersectionOf _:431fa0 . _:431fa0 rdf:first ; rdf:rest _:431fc0 . _:431fc0 rdf:first _:431fb0; rdf:rest _:431fe0 . _:431fb0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:431fe0 rdf:first _:431fd0; rdf:rest rdf:nil . _:431fd0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:431ff0 . _:431ff0 a owl:Class; owl:intersectionOf _:432000 . _:432000 rdf:first ; rdf:rest _:432020 . _:432020 rdf:first _:432010; rdf:rest rdf:nil . _:432010 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:432030 . _:432030 a owl:Class; owl:intersectionOf _:432040 . _:432040 rdf:first ; rdf:rest _:432060 . _:432060 rdf:first _:432050; rdf:rest rdf:nil . _:432050 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:432070 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:432080 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; owl:equivalentClass _:432090; rdfs:subClassOf , _:432180, _:432190; "a Gout human-gut microbiome interaction that shows an expansion of Negativicutes in patients with gout compared with healthy controls."; "Haihe Wang, Hong Yu, Yongqun He"; "https://www.ncbi.nlm.nih.gov/pubmed/28270806/"; rdfs:label "expansion of Negativicutes in gout human gut"@en . _:432090 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:4320a0 . _:4320a0 a owl:Class; owl:intersectionOf _:4320b0 . _:4320b0 rdf:first ; rdf:rest _:4320d0 . _:4320d0 rdf:first _:4320c0; rdf:rest _:4320f0 . _:4320c0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:4320f0 rdf:first _:4320e0; rdf:rest rdf:nil . _:4320e0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:432100 . _:432100 a owl:Class; 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rdf:rest _:4323b0 . _:4323b0 rdf:first _:4323a0; rdf:rest rdf:nil . _:4323a0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:4323c0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:4323d0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; owl:equivalentClass _:4323e0; rdfs:subClassOf , _:4324d0, _:4324e0; "a Gout human-gut microbiome interaction that shows an decrease of Photobacterium in patients with gout compared with healthy controls."; "Haihe Wang, Hong Yu, Yongqun He"; "https://www.ncbi.nlm.nih.gov/pubmed/?term=28270806"; rdfs:label "depletion of Photobacterium in gout human gut"@en . _:4323e0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:4323f0 . _:4323f0 a owl:Class; owl:intersectionOf _:432400 . _:432400 rdf:first ; rdf:rest _:432420 . _:432420 rdf:first _:432410; rdf:rest _:432440 . _:432410 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:432440 rdf:first _:432430; rdf:rest rdf:nil . _:432430 a owl:Restriction; owl:onProperty ; 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owl:intersectionOf _:432510 . _:432510 rdf:first ; rdf:rest _:432530 . _:432530 rdf:first _:432520; rdf:rest _:432550 . _:432520 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:432550 rdf:first _:432540; rdf:rest rdf:nil . _:432540 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:432560 . _:432560 a owl:Class; owl:intersectionOf _:432570 . _:432570 rdf:first ; rdf:rest _:432590 . _:432590 rdf:first _:432580; rdf:rest rdf:nil . _:432580 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:4325a0 . _:4325a0 a owl:Class; owl:intersectionOf _:4325b0 . _:4325b0 rdf:first ; rdf:rest _:4325d0 . _:4325d0 rdf:first _:4325c0; rdf:rest rdf:nil . _:4325c0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:4325e0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:4325f0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; owl:equivalentClass _:432600; rdfs:subClassOf , _:4326f0; "A colorectal cancer human-gut microbiome interaction where Eubacterium ventriosum is decreased."; 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owl:onProperty ; owl:someValuesFrom . a owl:Class; owl:equivalentClass _:432700; rdfs:subClassOf , _:4327f0, _:432800; "a Gout human-gut microbiome interaction that shows an decrease of Lachnospiraceae in patients with gout compared with healthy controls."; "Haihe Wang, Hong Yu, Yongqun He"; "https://www.ncbi.nlm.nih.gov/pubmed/?term=28270806"; rdfs:label "depletion of Lachnospiraceae in gout human gut"@en . _:432700 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:432710 . _:432710 a owl:Class; owl:intersectionOf _:432720 . _:432720 rdf:first ; rdf:rest _:432740 . _:432740 rdf:first _:432730; rdf:rest _:432760 . _:432730 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:432760 rdf:first _:432750; rdf:rest rdf:nil . _:432750 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:432770 . _:432770 a owl:Class; owl:intersectionOf _:432780 . _:432780 rdf:first ; rdf:rest _:4327a0 . _:4327a0 rdf:first _:432790; rdf:rest rdf:nil . _:432790 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:4327b0 . _:4327b0 a owl:Class; owl:intersectionOf _:4327c0 . _:4327c0 rdf:first ; rdf:rest _:4327e0 . _:4327e0 rdf:first _:4327d0; rdf:rest rdf:nil . _:4327d0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:4327f0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:432800 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; owl:equivalentClass _:432810; rdfs:subClassOf , _:432900, _:432910; "a Gout human-gut microbiome interaction that shows an decrease of Ruminococcaceae in patients with gout compared with healthy controls."; "Haihe Wang, Hong Yu, Yongqun He"; "https://www.ncbi.nlm.nih.gov/pubmed/?term=28270806"; rdfs:label "depletion of Ruminococcaceae in gout human gut"@en . _:432810 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:432820 . _:432820 a owl:Class; owl:intersectionOf _:432830 . _:432830 rdf:first ; rdf:rest _:432850 . _:432850 rdf:first _:432840; rdf:rest _:432870 . _:432840 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:432870 rdf:first _:432860; rdf:rest rdf:nil . _:432860 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:432880 . _:432880 a owl:Class; owl:intersectionOf _:432890 . _:432890 rdf:first ; rdf:rest _:4328b0 . _:4328b0 rdf:first _:4328a0; rdf:rest rdf:nil . _:4328a0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:4328c0 . _:4328c0 a owl:Class; owl:intersectionOf _:4328d0 . _:4328d0 rdf:first ; rdf:rest _:4328f0 . _:4328f0 rdf:first _:4328e0; rdf:rest rdf:nil . _:4328e0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:432900 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:432910 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; owl:equivalentClass _:432920; rdfs:subClassOf , _:432a10, _:432a20; "a Gout human-gut microbiome interaction that shows an expansion of Erysipelatoclostridium in patients with gout compared with healthy controls."; "Haihe Wang, Hong Yu, Yongqun He"; "https://www.ncbi.nlm.nih.gov/pubmed/28270806/"; rdfs:label "expansion of Erysipelatoclostridium in gout human gut"@en . _:432920 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:432930 . _:432930 a owl:Class; owl:intersectionOf _:432940 . _:432940 rdf:first ; rdf:rest _:432960 . _:432960 rdf:first _:432950; rdf:rest _:432980 . _:432950 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:432980 rdf:first _:432970; rdf:rest rdf:nil . _:432970 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:432990 . _:432990 a owl:Class; owl:intersectionOf _:4329a0 . _:4329a0 rdf:first ; rdf:rest _:4329c0 . _:4329c0 rdf:first _:4329b0; rdf:rest rdf:nil . _:4329b0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:4329d0 . _:4329d0 a owl:Class; owl:intersectionOf _:4329e0 . _:4329e0 rdf:first ; rdf:rest _:432a00 . _:432a00 rdf:first _:4329f0; rdf:rest rdf:nil . _:4329f0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:432a10 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:432a20 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; owl:equivalentClass _:432a30; rdfs:subClassOf , _:432b20, _:432b30; "a Gout human-gut microbiome interaction that shows an expansion of Escherichia coli EPEC32/73 in patients with gout compared with healthy controls."; "Haihe Wang, Hong Yu, Yongqun He"; "https://www.ncbi.nlm.nih.gov/pubmed/23340314/", "https://www.ncbi.nlm.nih.gov/pubmed/23811846/"; rdfs:label "expansion of Escherichia coli EPEC 32/73 in gout human gut"@en . _:432a30 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:432a40 . _:432a40 a owl:Class; owl:intersectionOf _:432a50 . _:432a50 rdf:first ; rdf:rest _:432a70 . _:432a70 rdf:first _:432a60; rdf:rest _:432a90 . _:432a60 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:432a90 rdf:first _:432a80; rdf:rest rdf:nil . _:432a80 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:432aa0 . _:432aa0 a owl:Class; owl:intersectionOf _:432ab0 . _:432ab0 rdf:first ; rdf:rest _:432ad0 . _:432ad0 rdf:first _:432ac0; rdf:rest rdf:nil . _:432ac0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:432ae0 . _:432ae0 a owl:Class; owl:intersectionOf _:432af0 . _:432af0 rdf:first ; rdf:rest _:432b10 . _:432b10 rdf:first _:432b00; rdf:rest rdf:nil . _:432b00 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:432b20 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:432b30 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; owl:equivalentClass _:432b40; rdfs:subClassOf , _:432c30, _:432c40; "a Gout human-gut microbiome interaction that shows an expansion of Escherichia coli ETEC TW03439 in patients with gout compared with healthy controls."; "Haihe Wang, Hong Yu, Yongqun He"; "https://www.ncbi.nlm.nih.gov/pubmed/23340314/", "https://www.ncbi.nlm.nih.gov/pubmed/23811846/"; rdfs:label "expansion of E. coli ETEC TW03439 in gout human gut"@en . _:432b40 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:432b50 . _:432b50 a owl:Class; owl:intersectionOf _:432b60 . _:432b60 rdf:first ; rdf:rest _:432b80 . _:432b80 rdf:first _:432b70; rdf:rest _:432ba0 . _:432b70 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:432ba0 rdf:first _:432b90; rdf:rest rdf:nil . _:432b90 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:432bb0 . _:432bb0 a owl:Class; owl:intersectionOf _:432bc0 . _:432bc0 rdf:first ; rdf:rest _:432be0 . _:432be0 rdf:first _:432bd0; rdf:rest rdf:nil . _:432bd0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:432bf0 . _:432bf0 a owl:Class; owl:intersectionOf _:432c00 . _:432c00 rdf:first ; rdf:rest _:432c20 . _:432c20 rdf:first _:432c10; rdf:rest rdf:nil . _:432c10 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:432c30 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:432c40 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; owl:equivalentClass _:432c50; rdfs:subClassOf , _:432d40, _:432d50; "a Gout human-gut microbiome interaction that shows an expansion of Barnesiella in patients with gout compared with healthy controls."; "Haihe Wang, Hong Yu, Yongqun He"; "https://www.ncbi.nlm.nih.gov/pubmed/26852926/", "https://www.ncbi.nlm.nih.gov/pubmed/27941389/"; rdfs:label "expansion of Barnesiella in gout human gut"@en . _:432c50 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:432c60 . _:432c60 a owl:Class; owl:intersectionOf _:432c70 . _:432c70 rdf:first ; rdf:rest _:432c90 . _:432c90 rdf:first _:432c80; rdf:rest _:432cb0 . _:432c80 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:432cb0 rdf:first _:432ca0; rdf:rest rdf:nil . _:432ca0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:432cc0 . _:432cc0 a owl:Class; owl:intersectionOf _:432cd0 . _:432cd0 rdf:first ; rdf:rest _:432cf0 . _:432cf0 rdf:first _:432ce0; rdf:rest rdf:nil . _:432ce0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:432d00 . _:432d00 a owl:Class; owl:intersectionOf _:432d10 . _:432d10 rdf:first ; rdf:rest _:432d30 . _:432d30 rdf:first _:432d20; rdf:rest rdf:nil . _:432d20 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:432d40 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:432d50 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; owl:equivalentClass _:432d60; rdfs:subClassOf , _:432e50, _:432e60; "a Gout human-gut microbiome interaction that shows an expansion of Parasporobacterium in patients with gout compared with healthy controls."; "Haihe Wang, Hong Yu, Yongqun He"; "https://www.ncbi.nlm.nih.gov/pubmed/26852926/", "https://www.ncbi.nlm.nih.gov/pubmed/27941389/"; rdfs:label "expansion of Parasporobacterium in gout human gut"@en . _:432d60 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:432d70 . _:432d70 a owl:Class; owl:intersectionOf _:432d80 . _:432d80 rdf:first ; rdf:rest _:432da0 . _:432da0 rdf:first _:432d90; rdf:rest _:432dc0 . _:432d90 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:432dc0 rdf:first _:432db0; rdf:rest rdf:nil . _:432db0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:432dd0 . _:432dd0 a owl:Class; owl:intersectionOf _:432de0 . _:432de0 rdf:first ; 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rdf:rest _:432eb0 . _:432eb0 rdf:first _:432ea0; rdf:rest _:432ed0 . _:432ea0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:432ed0 rdf:first _:432ec0; rdf:rest rdf:nil . _:432ec0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:432ee0 . _:432ee0 a owl:Class; owl:intersectionOf _:432ef0 . _:432ef0 rdf:first ; rdf:rest _:432f10 . _:432f10 rdf:first _:432f00; rdf:rest rdf:nil . _:432f00 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:432f20 . _:432f20 a owl:Class; owl:intersectionOf _:432f30 . _:432f30 rdf:first ; rdf:rest _:432f50 . _:432f50 rdf:first _:432f40; rdf:rest rdf:nil . _:432f40 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:432f60 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:432f70 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; owl:equivalentClass _:432f80; rdfs:subClassOf , _:433070, _:433080; "a Gout human-gut microbiome interaction that shows an expansion of Anaerotruncus in patients with gout compared with healthy controls."; 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owl:someValuesFrom . _:433070 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:433080 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; owl:equivalentClass _:433090; rdfs:subClassOf , _:433180, _:433190; "a Gout human-gut microbiome interaction that shows an expansion of Pseudobutyrivibrio in patients with gout compared with healthy controls."; "Haihe Wang, Hong Yu, Yongqun He"; "https://www.ncbi.nlm.nih.gov/pubmed/26852926/" . _:433090 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:4330a0 . _:4330a0 a owl:Class; owl:intersectionOf _:4330b0 . _:4330b0 rdf:first ; rdf:rest _:4330d0 . _:4330d0 rdf:first _:4330c0; rdf:rest _:4330f0 . _:4330c0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:4330f0 rdf:first _:4330e0; rdf:rest rdf:nil . _:4330e0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:433100 . _:433100 a owl:Class; owl:intersectionOf _:433110 . _:433110 rdf:first ; rdf:rest _:433130 . _:433130 rdf:first _:433120; rdf:rest rdf:nil . _:433120 a owl:Restriction; 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rdf:rest _:433240 . _:433240 rdf:first _:433230; rdf:rest rdf:nil . _:433230 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:433250 . _:433250 a owl:Class; owl:intersectionOf _:433260 . _:433260 rdf:first ; rdf:rest _:433280 . _:433280 rdf:first _:433270; rdf:rest rdf:nil . _:433270 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:433290 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:4332a0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; owl:equivalentClass _:4332b0; rdfs:subClassOf , _:4333a0, _:4333b0; "a Gout human-gut microbiome interaction that shows an expansion of Bacteroides sp in patients with gout compared with healthy controls."; "Haihe Wang, Hong Yu, Yongqun He"; "https://www.ncbi.nlm.nih.gov/pubmed/26852926/", "https://www.ncbi.nlm.nih.gov/pubmed/27941389/"; rdfs:label "expansion of Bacteroides sp in gout human gut"@en . _:4332b0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:4332c0 . _:4332c0 a owl:Class; owl:intersectionOf _:4332d0 . _:4332d0 rdf:first ; rdf:rest _:4332f0 . _:4332f0 rdf:first _:4332e0; rdf:rest _:433310 . _:4332e0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:433310 rdf:first _:433300; rdf:rest rdf:nil . _:433300 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:433320 . _:433320 a owl:Class; owl:intersectionOf _:433330 . _:433330 rdf:first ; rdf:rest _:433350 . _:433350 rdf:first _:433340; rdf:rest rdf:nil . _:433340 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:433360 . _:433360 a owl:Class; owl:intersectionOf _:433370 . _:433370 rdf:first ; rdf:rest _:433390 . _:433390 rdf:first _:433380; rdf:rest rdf:nil . _:433380 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:4333a0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:4333b0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; owl:equivalentClass _:4333c0; rdfs:subClassOf , _:4334b0, _:4334c0; "a Gout human-gut microbiome interaction that shows an expansion of Bacteroides xylanisolvens XB1A in patients with gout compared with healthy controls."; "Haihe Wang, Hong Yu, Yongqun He"; "https://www.ncbi.nlm.nih.gov/pubmed/26852926/", "https://www.ncbi.nlm.nih.gov/pubmed/27941389/"; rdfs:label "expansion of Bacteroides xylanisolvens XB1A in gout human gut"@en . _:4333c0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:4333d0 . _:4333d0 a owl:Class; owl:intersectionOf _:4333e0 . _:4333e0 rdf:first ; rdf:rest _:433400 . _:433400 rdf:first _:4333f0; rdf:rest _:433420 . _:4333f0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:433420 rdf:first _:433410; rdf:rest rdf:nil . _:433410 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:433430 . _:433430 a owl:Class; owl:intersectionOf _:433440 . _:433440 rdf:first ; rdf:rest _:433460 . _:433460 rdf:first _:433450; rdf:rest rdf:nil . _:433450 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:433470 . _:433470 a owl:Class; owl:intersectionOf _:433480 . _:433480 rdf:first ; rdf:rest _:4334a0 . _:4334a0 rdf:first _:433490; rdf:rest rdf:nil . _:433490 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:4334b0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:4334c0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; owl:equivalentClass _:4334d0; rdfs:subClassOf , _:4335c0, _:4335d0; "a Gout human-gut microbiome interaction that shows an expansion of Holdemania in patients with gout compared with healthy controls."; "Haihe Wang, Hong Yu, Yongqun He"; "https://www.ncbi.nlm.nih.gov/pubmed/26852926/", "https://www.ncbi.nlm.nih.gov/pubmed/27941389/"; rdfs:label "expansion of Holdemania in gout human gut"@en . _:4334d0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:4334e0 . _:4334e0 a owl:Class; owl:intersectionOf _:4334f0 . _:4334f0 rdf:first ; rdf:rest _:433510 . _:433510 rdf:first _:433500; rdf:rest _:433530 . _:433500 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:433530 rdf:first _:433520; rdf:rest rdf:nil . _:433520 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:433540 . _:433540 a owl:Class; owl:intersectionOf _:433550 . _:433550 rdf:first ; rdf:rest _:433570 . _:433570 rdf:first _:433560; rdf:rest rdf:nil . _:433560 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:433580 . _:433580 a owl:Class; owl:intersectionOf _:433590 . _:433590 rdf:first ; rdf:rest _:4335b0 . _:4335b0 rdf:first _:4335a0; rdf:rest rdf:nil . _:4335a0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:4335c0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:4335d0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; owl:equivalentClass _:4335e0; rdfs:subClassOf , _:4336d0, _:4336e0; "a Gout human-gut microbiome interaction that shows an expansion of rare taxa,Acetanaerobacterium in patients with gout compared with healthy controls."; "Haihe Wang, Hong Yu, Yongqun He"; "https://www.ncbi.nlm.nih.gov/pubmed/26852926/", "https://www.ncbi.nlm.nih.gov/pubmed/27941389/"; rdfs:label "expansion of Acetanaerobacterium in gout human gut"@en . _:4335e0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:4335f0 . _:4335f0 a owl:Class; owl:intersectionOf _:433600 . _:433600 rdf:first ; rdf:rest _:433620 . _:433620 rdf:first _:433610; rdf:rest _:433640 . _:433610 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:433640 rdf:first _:433630; rdf:rest rdf:nil . _:433630 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:433650 . _:433650 a owl:Class; owl:intersectionOf _:433660 . _:433660 rdf:first ; rdf:rest _:433680 . _:433680 rdf:first _:433670; rdf:rest rdf:nil . _:433670 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:433690 . _:433690 a owl:Class; owl:intersectionOf _:4336a0 . _:4336a0 rdf:first ; rdf:rest _:4336c0 . _:4336c0 rdf:first _:4336b0; rdf:rest rdf:nil . _:4336b0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:4336d0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:4336e0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; owl:equivalentClass _:4336f0; rdfs:subClassOf , _:4337e0, _:4337f0; "a Gout human-gut microbiome interaction that shows an decrease of Coprococcus catus in patients with gout compared with healthy controls."; "Haihe Wang, Hong Yu, Yongqun He"; "https://www.ncbi.nlm.nih.gov/pubmed/?term=26852926", "https://www.ncbi.nlm.nih.gov/pubmed/?term=27941389"; rdfs:label "depletion of Coprococcus catus in gout human gut"@en . _:4336f0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:433700 . _:433700 a owl:Class; owl:intersectionOf _:433710 . _:433710 rdf:first ; rdf:rest _:433730 . _:433730 rdf:first _:433720; rdf:rest _:433750 . _:433720 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:433750 rdf:first _:433740; rdf:rest rdf:nil . _:433740 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:433760 . _:433760 a owl:Class; owl:intersectionOf _:433770 . _:433770 rdf:first ; rdf:rest _:433790 . _:433790 rdf:first _:433780; rdf:rest rdf:nil . _:433780 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:4337a0 . _:4337a0 a owl:Class; owl:intersectionOf _:4337b0 . _:4337b0 rdf:first ; rdf:rest _:4337d0 . _:4337d0 rdf:first _:4337c0; rdf:rest rdf:nil . _:4337c0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:4337e0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:4337f0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; owl:equivalentClass _:433800; rdfs:subClassOf , _:4338f0, _:433900; "a Gout human-gut microbiome interaction that shows an decrease of Faecalibacterium prausnitzii in patients with gout compared with healthy controls."; "Haihe Wang, Hong Yu, Yongqun He"; "https://www.ncbi.nlm.nih.gov/pubmed/?term=26852926", "https://www.ncbi.nlm.nih.gov/pubmed/?term=27941389"; rdfs:label "depletion of Faecalibacterium prausnitzii in gout human gut"@en . _:433800 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:433810 . _:433810 a owl:Class; owl:intersectionOf _:433820 . _:433820 rdf:first ; rdf:rest _:433840 . _:433840 rdf:first _:433830; rdf:rest _:433860 . _:433830 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:433860 rdf:first _:433850; rdf:rest rdf:nil . _:433850 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:433870 . _:433870 a owl:Class; owl:intersectionOf _:433880 . _:433880 rdf:first ; rdf:rest _:4338a0 . _:4338a0 rdf:first _:433890; rdf:rest rdf:nil . _:433890 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:4338b0 . _:4338b0 a owl:Class; owl:intersectionOf _:4338c0 . _:4338c0 rdf:first ; rdf:rest _:4338e0 . _:4338e0 rdf:first _:4338d0; rdf:rest rdf:nil . _:4338d0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:4338f0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:433900 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; owl:equivalentClass _:433910; rdfs:subClassOf , _:433a00, _:433a10; "a Gout human-gut microbiome interaction that shows an decrease of Oscillibacter in patients with gout compared with healthy controls."; "Haihe Wang, Hong Yu, Yongqun He"; "https://www.ncbi.nlm.nih.gov/pubmed/?term=26852926", "https://www.ncbi.nlm.nih.gov/pubmed/?term=27941389"; rdfs:label "depletion of Oscillibacter in gout human gut"@en . _:433910 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:433920 . _:433920 a owl:Class; owl:intersectionOf _:433930 . _:433930 rdf:first ; rdf:rest _:433950 . _:433950 rdf:first _:433940; rdf:rest _:433970 . _:433940 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:433970 rdf:first _:433960; rdf:rest rdf:nil . _:433960 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:433980 . _:433980 a owl:Class; owl:intersectionOf _:433990 . _:433990 rdf:first ; rdf:rest _:4339b0 . _:4339b0 rdf:first _:4339a0; rdf:rest rdf:nil . _:4339a0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:4339c0 . _:4339c0 a owl:Class; owl:intersectionOf _:4339d0 . _:4339d0 rdf:first ; rdf:rest _:4339f0 . _:4339f0 rdf:first _:4339e0; rdf:rest rdf:nil . _:4339e0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:433a00 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:433a10 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; owl:equivalentClass _:433a20; rdfs:subClassOf , _:433b10, _:433b20; "a Gout human-gut microbiome interaction that shows an decrease of Ruminococcus sp. in patients with gout compared with healthy controls."; "Haihe Wang, Hong Yu, Yongqun He"; "https://www.ncbi.nlm.nih.gov/pubmed/?term=26852926", "https://www.ncbi.nlm.nih.gov/pubmed/?term=27941389"; rdfs:label "depletion of Ruminococcus sp. in gout human gut"@en . _:433a20 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:433a30 . _:433a30 a owl:Class; owl:intersectionOf _:433a40 . _:433a40 rdf:first ; rdf:rest _:433a60 . _:433a60 rdf:first _:433a50; rdf:rest _:433a80 . _:433a50 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:433a80 rdf:first _:433a70; rdf:rest rdf:nil . _:433a70 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:433a90 . _:433a90 a owl:Class; owl:intersectionOf _:433aa0 . _:433aa0 rdf:first ; rdf:rest _:433ac0 . _:433ac0 rdf:first _:433ab0; rdf:rest rdf:nil . _:433ab0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:433ad0 . _:433ad0 a owl:Class; owl:intersectionOf _:433ae0 . _:433ae0 rdf:first ; rdf:rest _:433b00 . _:433b00 rdf:first _:433af0; rdf:rest rdf:nil . _:433af0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:433b10 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:433b20 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; owl:equivalentClass _:433b30; rdfs:subClassOf , _:433c20, _:433c30; "a Gout human-gut microbiome interaction that shows an decrease of Odoribacter in patients with gout compared with healthy controls."; "Haihe Wang, Hong Yu, Yongqun He"; "https://www.ncbi.nlm.nih.gov/pubmed/?term=26852926", "https://www.ncbi.nlm.nih.gov/pubmed/?term=27941389"; rdfs:label "depletion of Odoribacter in gout human gut"@en . _:433b30 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:433b40 . _:433b40 a owl:Class; owl:intersectionOf _:433b50 . _:433b50 rdf:first ; rdf:rest _:433b70 . _:433b70 rdf:first _:433b60; rdf:rest _:433b90 . _:433b60 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:433b90 rdf:first _:433b80; rdf:rest rdf:nil . _:433b80 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:433ba0 . _:433ba0 a owl:Class; owl:intersectionOf _:433bb0 . _:433bb0 rdf:first ; rdf:rest _:433bd0 . _:433bd0 rdf:first _:433bc0; rdf:rest rdf:nil . _:433bc0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:433be0 . _:433be0 a owl:Class; owl:intersectionOf _:433bf0 . _:433bf0 rdf:first ; rdf:rest _:433c10 . _:433c10 rdf:first _:433c00; rdf:rest rdf:nil . _:433c00 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:433c20 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:433c30 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; owl:equivalentClass _:433c40; rdfs:subClassOf , _:433d30, _:433d40; "a Gout human-gut microbiome interaction that shows an decrease of Subdoligranulum in patients with gout compared with healthy controls."; "Haihe Wang, Hong Yu, Yongqun He"; "https://www.ncbi.nlm.nih.gov/pubmed/?term=26852926", "https://www.ncbi.nlm.nih.gov/pubmed/?term=27941389"; rdfs:label "depletion of Subdoligranulum in gout human gut"@en . _:433c40 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:433c50 . _:433c50 a owl:Class; owl:intersectionOf _:433c60 . _:433c60 rdf:first ; rdf:rest _:433c80 . _:433c80 rdf:first _:433c70; rdf:rest _:433ca0 . _:433c70 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:433ca0 rdf:first _:433c90; rdf:rest rdf:nil . _:433c90 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:433cb0 . _:433cb0 a owl:Class; owl:intersectionOf _:433cc0 . _:433cc0 rdf:first ; rdf:rest _:433ce0 . _:433ce0 rdf:first _:433cd0; rdf:rest rdf:nil . _:433cd0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:433cf0 . _:433cf0 a owl:Class; owl:intersectionOf _:433d00 . _:433d00 rdf:first ; rdf:rest _:433d20 . _:433d20 rdf:first _:433d10; rdf:rest rdf:nil . _:433d10 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:433d30 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:433d40 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; owl:equivalentClass _:433d50; rdfs:subClassOf , _:433e40, _:433e50; "a Gout human-gut microbiome interaction that shows an decrease of Robinsoniella in patients with gout compared with healthy controls."; "Haihe Wang, Hong Yu, Yongqun He"; "https://www.ncbi.nlm.nih.gov/pubmed/?term=26852926", "https://www.ncbi.nlm.nih.gov/pubmed/?term=27941389"; rdfs:label "depletion of Robinsoniella in gout human gut"@en . _:433d50 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:433d60 . _:433d60 a owl:Class; owl:intersectionOf _:433d70 . _:433d70 rdf:first ; rdf:rest _:433d90 . _:433d90 rdf:first _:433d80; rdf:rest _:433db0 . _:433d80 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:433db0 rdf:first _:433da0; rdf:rest rdf:nil . _:433da0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:433dc0 . _:433dc0 a owl:Class; owl:intersectionOf _:433dd0 . _:433dd0 rdf:first ; rdf:rest _:433df0 . _:433df0 rdf:first _:433de0; rdf:rest rdf:nil . _:433de0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:433e00 . _:433e00 a owl:Class; owl:intersectionOf _:433e10 . _:433e10 rdf:first ; rdf:rest _:433e30 . _:433e30 rdf:first _:433e20; rdf:rest rdf:nil . _:433e20 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:433e40 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:433e50 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; owl:equivalentClass _:433e60; rdfs:subClassOf , _:433f50, _:433f60; "a Gout human-gut microbiome interaction that shows an decrease of Dialister in patients with gout compared with healthy controls."; "Haihe Wang, Hong Yu, Yongqun He"; "https://www.ncbi.nlm.nih.gov/pubmed/?term=26852926", "https://www.ncbi.nlm.nih.gov/pubmed/?term=27941389"; rdfs:label "depletion of Dialister in gout human gut"@en . _:433e60 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:433e70 . _:433e70 a owl:Class; owl:intersectionOf _:433e80 . _:433e80 rdf:first ; rdf:rest _:433ea0 . _:433ea0 rdf:first _:433e90; rdf:rest _:433ec0 . _:433e90 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:433ec0 rdf:first _:433eb0; rdf:rest rdf:nil . _:433eb0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:433ed0 . _:433ed0 a owl:Class; owl:intersectionOf _:433ee0 . _:433ee0 rdf:first ; rdf:rest _:433f00 . _:433f00 rdf:first _:433ef0; rdf:rest rdf:nil . _:433ef0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:433f10 . _:433f10 a owl:Class; owl:intersectionOf _:433f20 . _:433f20 rdf:first ; rdf:rest _:433f40 . _:433f40 rdf:first _:433f30; rdf:rest rdf:nil . _:433f30 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:433f50 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:433f60 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; owl:equivalentClass _:433f70; rdfs:subClassOf , _:434060, _:434070; "a Gout human-gut microbiome interaction that shows an decrease of Alistipes in patients with gout compared with healthy controls."; "Haihe Wang, Hong Yu, Yongqun He"; "https://www.ncbi.nlm.nih.gov/pubmed/?term=26852926", "https://www.ncbi.nlm.nih.gov/pubmed/?term=27941389"; rdfs:label "depletion of Alistipes in gout human gut"@en . _:433f70 a owl:Restriction; 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"a PsA human skin microbiome interaction that shows an decrease of Propionibacterium acnes 17B in patients with PsA compared with healthy controls."; "Haihe Wang, Hong Yu, Yongqun He"; "https://www.ncbi.nlm.nih.gov/pubmed/?term=18648509"; rdfs:label "depletion of Propionibacterium acnes 17B in PsA human skin"@en . _:434080 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:434090 . _:434090 a owl:Class; owl:intersectionOf _:4340a0 . _:4340a0 rdf:first ; rdf:rest _:4340c0 . _:4340c0 rdf:first _:4340b0; rdf:rest _:4340e0 . _:4340b0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:4340e0 rdf:first _:4340d0; rdf:rest rdf:nil . _:4340d0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:4340f0 . _:4340f0 a owl:Class; owl:intersectionOf _:434100 . _:434100 rdf:first ; rdf:rest _:434120 . _:434120 rdf:first _:434110; rdf:rest rdf:nil . _:434110 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:434130 . _:434130 a owl:Class; owl:intersectionOf _:434140 . _:434140 rdf:first ; 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"a PsA human skin microbiome interaction that shows an decrease of Malassezia restricta in patients with PsA compared with healthy controls."; "Haihe Wang, Hong Yu, Yongqun He"; rdfs:comment "https://www.ncbi.nlm.nih.gov/pubmed/?term= 18294199"; rdfs:label "depletion of Malassezia restricta in PsA human skin"@en . _:435110 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:435120 . _:435120 a owl:Class; owl:intersectionOf _:435130 . _:435130 rdf:first ; rdf:rest _:435150 . _:435150 rdf:first _:435140; rdf:rest _:435170 . _:435140 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:435170 rdf:first _:435160; rdf:rest rdf:nil . _:435160 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:435180 . _:435180 a owl:Class; owl:intersectionOf _:435190 . _:435190 rdf:first ; rdf:rest _:4351b0 . _:4351b0 rdf:first _:4351a0; rdf:rest rdf:nil . _:4351a0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:4351c0 . _:4351c0 a owl:Class; owl:intersectionOf _:4351d0 . _:4351d0 rdf:first ; rdf:rest _:4351f0 . _:4351f0 rdf:first _:4351e0; rdf:rest rdf:nil . _:4351e0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:435200 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:435210 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; owl:equivalentClass _:435220; rdfs:subClassOf , _:435310, _:435320; "a PsA human skin microbiome interaction that shows an decrease of Malassezia sympodialis in patients with PsA compared with healthy controls."; "Haihe Wang, Hong Yu, Yongqun He"; rdfs:comment "https://www.ncbi.nlm.nih.gov/pubmed/?term= 116891514"; rdfs:label "depletion of Malassezia sympodialis in PsA human skin"@en . _:435220 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:435230 . _:435230 a owl:Class; owl:intersectionOf _:435240 . _:435240 rdf:first ; rdf:rest _:435260 . _:435260 rdf:first _:435250; rdf:rest _:435280 . _:435250 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:435280 rdf:first _:435270; rdf:rest rdf:nil . _:435270 a owl:Restriction; 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"an AS human oral cavity microbiome interaction that shows an expansion of Porphyromonas gingivalis in patients with AS compared with healthy controls."; "Haihe Wang, Hong Yu, Yongqun He"; "https://www.ncbi.nlm.nih.gov/pubmed/26002454/"; rdfs:label "expansion of Porphyromonas gingivalis in AS human oral cavity"@en . _:435440 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:435450 . _:435450 a owl:Class; owl:intersectionOf _:435460 . _:435460 rdf:first ; rdf:rest _:435480 . _:435480 rdf:first _:435470; rdf:rest _:4354a0 . _:435470 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:4354a0 rdf:first _:435490; rdf:rest rdf:nil . _:435490 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:4354b0 . _:4354b0 a owl:Class; owl:intersectionOf _:4354c0 . _:4354c0 rdf:first ; rdf:rest _:4354e0 . _:4354e0 rdf:first _:4354d0; rdf:rest rdf:nil . _:4354d0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:4354f0 . _:4354f0 a owl:Class; owl:intersectionOf _:435500 . _:435500 rdf:first ; rdf:rest _:435520 . _:435520 rdf:first _:435510; rdf:rest rdf:nil . _:435510 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:435530 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:435540 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; owl:equivalentClass _:435550; rdfs:subClassOf , _:435640; "An association of musculus gut microbiota with system lupus erythematosus(SLE) that shows a depletion of Lactobacillus in musculus with SLE compared with healthy controls."; "Haihe Wang, Hong Yu, Yongqun He"; "https://www.ncbi.nlm.nih.gov/pubmed/25261516/"; rdfs:label "depletion of Lactobacillus in SLE mouse gut"@en . _:435550 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:435560 . _:435560 a owl:Class; owl:intersectionOf _:435570 . _:435570 rdf:first ; rdf:rest _:435590 . _:435590 rdf:first _:435580; rdf:rest _:435630 . _:435580 a owl:Class; owl:intersectionOf _:4355b0 . _:4355b0 rdf:first _:4355a0; rdf:rest _:435610 . _:4355a0 a owl:Restriction; 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owl:onProperty ; owl:someValuesFrom . _:435700 rdf:first _:4356f0; rdf:rest rdf:nil . _:4356f0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:435720 rdf:first _:435710; rdf:rest rdf:nil . _:435710 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; owl:equivalentClass _:435730; rdfs:subClassOf , _:435820, _:435830; "a RA human oral cavity microbiome interaction that shows an decrease of Aggregatibacter in patients with RA compared with healthy controls."; "Haihe Wang, Hong Yu, Yongqun He"; "https://www.ncbi.nlm.nih.gov/pubmed/?term=26214836"; rdfs:label "depletion of Aggregatibacter in RA human oral cavity"@en . _:435730 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:435740 . _:435740 a owl:Class; owl:intersectionOf _:435750 . _:435750 rdf:first ; rdf:rest _:435770 . _:435770 rdf:first _:435760; rdf:rest _:435790 . _:435760 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:435790 rdf:first _:435780; rdf:rest rdf:nil . _:435780 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:4357a0 . _:4357a0 a owl:Class; owl:intersectionOf _:4357b0 . _:4357b0 rdf:first ; rdf:rest _:4357d0 . _:4357d0 rdf:first _:4357c0; rdf:rest rdf:nil . _:4357c0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:4357e0 . _:4357e0 a owl:Class; owl:intersectionOf _:4357f0 . _:4357f0 rdf:first ; rdf:rest _:435810 . _:435810 rdf:first _:435800; rdf:rest rdf:nil . _:435800 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:435820 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:435830 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; owl:equivalentClass _:435840; rdfs:subClassOf , _:435930, _:435940; "a RA human oral cavity microbiome interaction that shows an expansion of Neisseria sp. in patients with RA compared with healthy controls."; "Haihe Wang, Hong Yu, Yongqun He"; "https://www.ncbi.nlm.nih.gov/pubmed/?term=26214836"; rdfs:label "depletion of Neisseria sp. in RA human oral cavity"@en . _:435840 a owl:Restriction; 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"An association of rattus gut microbiota with ankylosing spondylitis(AS) that shows an expansion of Paraprevotella in rattus with AS compared with healthy controls."; "Haihe Wang, Hong Yu, Yongqun He"; "https://www.ncbi.nlm.nih.gov/pubmed/25140823/"; rdfs:label "expansion of Paraprevotella in AS rat gut"@en . _:435950 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:435960 . _:435960 a owl:Class; owl:intersectionOf _:435970 . _:435970 rdf:first ; rdf:rest _:435990 . _:435990 rdf:first _:435980; rdf:rest _:435a30 . _:435980 a owl:Class; owl:intersectionOf _:4359b0 . _:4359b0 rdf:first _:4359a0; rdf:rest _:435a10 . _:4359a0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:4359c0 . _:4359c0 a owl:Class; owl:intersectionOf _:4359d0 . _:4359d0 rdf:first ; rdf:rest _:4359f0 . _:4359f0 rdf:first _:4359e0; rdf:rest rdf:nil . _:4359e0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:435a10 rdf:first _:435a00; rdf:rest rdf:nil . _:435a00 a owl:Restriction; owl:onProperty ; 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"Haihe Wang, Hong Yu, Yongqun He"; "https://www.ncbi.nlm.nih.gov/pubmed/25140823/"; rdfs:label "expansion of Prevotella in AS rat gut"@en . _:435c20 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:435c30 . _:435c30 a owl:Class; owl:intersectionOf _:435c40 . _:435c40 rdf:first ; rdf:rest _:435c60 . _:435c60 rdf:first _:435c50; rdf:rest _:435d00 . _:435c50 a owl:Class; owl:intersectionOf _:435c80 . _:435c80 rdf:first _:435c70; rdf:rest _:435ce0 . _:435c70 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:435c90 . _:435c90 a owl:Class; owl:intersectionOf _:435ca0 . _:435ca0 rdf:first ; rdf:rest _:435cc0 . _:435cc0 rdf:first _:435cb0; rdf:rest rdf:nil . _:435cb0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:435ce0 rdf:first _:435cd0; rdf:rest rdf:nil . _:435cd0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:435d00 rdf:first _:435cf0; rdf:rest rdf:nil . _:435cf0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; owl:equivalentClass _:435d10; 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"association of rat gut microbiota with arthritis"@en; rdfs:label "arthritis rat-gut microbiome interaction" . _:436490 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:4364a0 . _:4364a0 a owl:Class; owl:intersectionOf _:4364b0 . _:4364b0 rdf:first ; rdf:rest _:4364d0 . _:4364d0 rdf:first _:4364c0; rdf:rest rdf:nil . _:4364c0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; owl:equivalentClass _:4364e0; rdfs:subClassOf , _:4365d0; "An association of rattus gut microbiota with arthritis that shows an expansion of Bifidobacterium in rattus with arthritis compared with healthy controls."; "Haihe Wang, Hong Yu, Yongqun He"; "https://www.ncbi.nlm.nih.gov/pubmed/2931580/"; rdfs:label "expansion of Bifidobacterium in arthritis rat gut"@en . _:4364e0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:4364f0 . _:4364f0 a owl:Class; owl:intersectionOf _:436500 . _:436500 rdf:first ; rdf:rest _:436520 . _:436520 rdf:first _:436510; rdf:rest _:4365c0 . _:436510 a owl:Class; 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owl:intersectionOf _:436650 . _:436650 rdf:first ; rdf:rest _:436670 . _:436670 rdf:first _:436660; rdf:rest rdf:nil . _:436660 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:436690 rdf:first _:436680; rdf:rest rdf:nil . _:436680 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:4366b0 rdf:first _:4366a0; rdf:rest rdf:nil . _:4366a0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; owl:equivalentClass _:4366c0; rdfs:subClassOf , _:4367b0; "An association of rattus gut microbiota with arthritis that shows an expansion of Propionibacterium acnes 17B in rattus with arthritis compared with healthy controls."; "Haihe Wang, Hong Yu, Yongqun He"; "https://www.ncbi.nlm.nih.gov/pubmed/2931580/"; rdfs:label "expansion of Propionibacterium acnes 17B in arthritis rat gut"@en . _:4366c0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:4366d0 . _:4366d0 a owl:Class; owl:intersectionOf _:4366e0 . _:4366e0 rdf:first ; rdf:rest _:436700 . _:436700 rdf:first _:4366f0; 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"An association of rattus gut microbiota with arthritis that shows an expansion of Lactobacillus in rattus with arthritis compared with healthy controls."; "Haihe Wang, Hong Yu, Yongqun He"; "https://www.ncbi.nlm.nih.gov/pubmed/27481047/"; rdfs:label "expansion of Lactobacillus in arthritis rat gut"@en . a owl:Class; owl:equivalentClass _:4373e0; rdfs:subClassOf , _:4374d0; "An association of rattus gut microbiota with arthritis that shows an expansion of Bacteroidaceae in rattus with arthritis compared with healthy controls."; "Haihe Wang, Hong Yu, Yongqun He"; "https://www.ncbi.nlm.nih.gov/pubmed/27481047/"; rdfs:label "expansion of Bacteroidaceae in arthritis rat gut"@en . _:4373e0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:4373f0 . _:4373f0 a owl:Class; owl:intersectionOf _:437400 . _:437400 rdf:first ; rdf:rest _:437420 . _:437420 rdf:first _:437410; rdf:rest _:4374c0 . _:437410 a owl:Class; owl:intersectionOf _:437440 . _:437440 rdf:first _:437430; rdf:rest _:4374a0 . _:437430 a owl:Restriction; 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owl:onProperty ; owl:someValuesFrom . _:437590 rdf:first _:437580; rdf:rest rdf:nil . _:437580 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:4375b0 rdf:first _:4375a0; rdf:rest rdf:nil . _:4375a0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; owl:equivalentClass _:4375c0; rdfs:subClassOf , _:4376b0; "An association of rattus gut microbiota with arthritis that shows a depleted quantity of Lachnospiraceae in rattus with arthritis compared with healty controls."; "Haihe Wang, Hong Yu, Yongqun He"; "https://www.ncbi.nlm.nih.gov/pubmed/?term=27481047"; rdfs:label "Lachnospiraceae depletion in arthritis rat gut"@en . _:4375c0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:4375d0 . _:4375d0 a owl:Class; owl:intersectionOf _:4375e0 . _:4375e0 rdf:first ; rdf:rest _:437600 . _:437600 rdf:first _:4375f0; rdf:rest _:4376a0 . _:4375f0 a owl:Class; owl:intersectionOf _:437620 . _:437620 rdf:first _:437610; rdf:rest _:437680 . _:437610 a owl:Restriction; 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"Haihe Wang, Hong Yu, Yongqun He"; "https://www.ncbi.nlm.nih.gov/pubmed/2931580/"; rdfs:label "expansion of Bacteroides fragilis in arthritis rat gut"@en . _:437720 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:437730 . _:437730 a owl:Class; owl:intersectionOf _:437740 . _:437740 rdf:first ; rdf:rest _:437760 . _:437760 rdf:first _:437750; rdf:rest _:437800 . _:437750 a owl:Class; owl:intersectionOf _:437780 . _:437780 rdf:first _:437770; rdf:rest _:4377e0 . _:437770 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:437790 . _:437790 a owl:Class; owl:intersectionOf _:4377a0 . _:4377a0 rdf:first ; rdf:rest _:4377c0 . _:4377c0 rdf:first _:4377b0; rdf:rest rdf:nil . _:4377b0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:4377e0 rdf:first _:4377d0; rdf:rest rdf:nil . _:4377d0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:437800 rdf:first _:4377f0; rdf:rest rdf:nil . _:4377f0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:437810 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:437820 . _:437820 a owl:Class; owl:intersectionOf _:437830 . _:437830 rdf:first ; rdf:rest _:437850 . _:437850 rdf:first _:437840; rdf:rest _:4378f0 . _:437840 a owl:Class; owl:intersectionOf _:437870 . _:437870 rdf:first _:437860; rdf:rest _:4378d0 . _:437860 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:437880 . _:437880 a owl:Class; owl:intersectionOf _:437890 . _:437890 rdf:first ; rdf:rest _:4378b0 . _:4378b0 rdf:first _:4378a0; rdf:rest rdf:nil . _:4378a0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:4378d0 rdf:first _:4378c0; rdf:rest rdf:nil . _:4378c0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:4378f0 rdf:first _:4378e0; rdf:rest rdf:nil . _:4378e0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:437900; "A host-microbiome interaction where the host is musculus."; "YH, HW"; rdfs:label "mouse-microbiome interaction"@en . _:437900 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:437910 . _:437910 a owl:Class; owl:intersectionOf _:437920 . _:437920 rdf:first ; rdf:rest _:437940 . _:437940 rdf:first _:437930; rdf:rest rdf:nil . _:437930 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:437950; "An interaction between musculus and gut microbiome."; "YH"; rdfs:label "mouse gut microbiome interaction"@en . _:437950 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:437960 . _:437960 a owl:Class; owl:intersectionOf _:437970 . _:437970 rdf:first ; rdf:rest _:437990 . _:437990 rdf:first _:437980; rdf:rest rdf:nil . _:437980 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:4379a0; "A musculus gut-microbiome interaction that is associated with system lupus erythematosus(SLE)."; "Haihe Wang, Hong Yu, Yongqun He"; "association of mouse gut microbiota with system lupus erythematosus"@en; rdfs:label "SLE mouse-gut microbiome interaction" . _:4379a0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:4379b0 . _:4379b0 a owl:Class; owl:intersectionOf _:4379c0 . _:4379c0 rdf:first ; rdf:rest _:4379e0 . _:4379e0 rdf:first _:4379d0; rdf:rest rdf:nil . _:4379d0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; owl:equivalentClass _:4379f0; rdfs:subClassOf , _:437ae0; "An association of musculus gut microbiota with system lupus erythematosus(SLE) that shows an expansion of Lachnospiraceae in musculus with SLE compared with healthy controls."; "Haihe Wang, Hong Yu, Yongqun He"; "https://www.ncbi.nlm.nih.gov/pubmed/25261516/"; rdfs:label "expansion of Lachnospiraceae in SLE mouse gut"@en . _:4379f0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:437a00 . _:437a00 a owl:Class; owl:intersectionOf _:437a10 . _:437a10 rdf:first ; rdf:rest _:437a30 . _:437a30 rdf:first _:437a20; rdf:rest _:437ad0 . _:437a20 a owl:Class; owl:intersectionOf _:437a50 . _:437a50 rdf:first _:437a40; rdf:rest _:437ab0 . _:437a40 a owl:Restriction; owl:onProperty ; 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owl:onProperty ; owl:someValuesFrom . _:437ba0 rdf:first _:437b90; rdf:rest rdf:nil . _:437b90 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:437bc0 rdf:first _:437bb0; rdf:rest rdf:nil . _:437bb0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; owl:equivalentClass _:437bd0; rdfs:subClassOf , _:437cc0; "An association of musculus gut microbiota with system lupus erythematosus(SLE) that shows an expansion of Ruminococcaceae in musculus with SLE compared with healthy controls."; "Haihe Wang, Hong Yu, Yongqun He"; "https://www.ncbi.nlm.nih.gov/pubmed/25261516/"; rdfs:label "expansion of Ruminococcaceae in SLE mouse gut"@en . _:437bd0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:437be0 . _:437be0 a owl:Class; owl:intersectionOf _:437bf0 . _:437bf0 rdf:first ; rdf:rest _:437c10 . _:437c10 rdf:first _:437c00; rdf:rest _:437cb0 . _:437c00 a owl:Class; owl:intersectionOf _:437c30 . _:437c30 rdf:first _:437c20; rdf:rest _:437c90 . _:437c20 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:437c40 . _:437c40 a owl:Class; owl:intersectionOf _:437c50 . _:437c50 rdf:first ; rdf:rest _:437c70 . _:437c70 rdf:first _:437c60; rdf:rest rdf:nil . _:437c60 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:437c90 rdf:first _:437c80; rdf:rest rdf:nil . _:437c80 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:437cb0 rdf:first _:437ca0; rdf:rest rdf:nil . _:437ca0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:437cc0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:437cd0 . _:437cd0 a owl:Class; owl:intersectionOf _:437ce0 . _:437ce0 rdf:first ; rdf:rest _:437d00 . _:437d00 rdf:first _:437cf0; rdf:rest _:437da0 . _:437cf0 a owl:Class; owl:intersectionOf _:437d20 . _:437d20 rdf:first _:437d10; rdf:rest _:437d80 . _:437d10 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:437d30 . _:437d30 a owl:Class; owl:intersectionOf _:437d40 . _:437d40 rdf:first ; rdf:rest _:437d60 . _:437d60 rdf:first _:437d50; rdf:rest rdf:nil . _:437d50 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:437d80 rdf:first _:437d70; rdf:rest rdf:nil . _:437d70 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:437da0 rdf:first _:437d90; rdf:rest rdf:nil . _:437d90 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; owl:equivalentClass _:437db0; rdfs:subClassOf , _:437ea0; "An association of musculus gut microbiota with system lupus erythematosus(SLE) that shows an expansion of Clostridiales in musculus with SLE compared with healthy controls."; "Haihe Wang, Hong Yu, Yongqun He"; "https://www.ncbi.nlm.nih.gov/pubmed/25261516/"; rdfs:label "expansion of Clostridiales in SLE mouse gut"@en . _:437db0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:437dc0 . _:437dc0 a owl:Class; owl:intersectionOf _:437dd0 . _:437dd0 rdf:first ; rdf:rest _:437df0 . _:437df0 rdf:first _:437de0; rdf:rest _:437e90 . _:437de0 a owl:Class; owl:intersectionOf _:437e10 . _:437e10 rdf:first _:437e00; rdf:rest _:437e70 . _:437e00 a owl:Restriction; 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owl:onProperty ; owl:someValuesFrom . _:437f60 rdf:first _:437f50; rdf:rest rdf:nil . _:437f50 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:437f80 rdf:first _:437f70; rdf:rest rdf:nil . _:437f70 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; owl:equivalentClass _:437f90; rdfs:subClassOf , _:438080; "An association of musculus gut microbiota with system lupus erythematosus(SLE) that shows an expansion of Streptococcaceae in musculus with SLE compared with healthy controls."; "Haihe Wang, Hong Yu, Yongqun He"; "https://www.ncbi.nlm.nih.gov/pubmed/25261516/"; rdfs:label "expansion of Streptococcaceae in SLE mouse gut"@en . _:437f90 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:437fa0 . _:437fa0 a owl:Class; owl:intersectionOf _:437fb0 . _:437fb0 rdf:first ; rdf:rest _:437fd0 . _:437fd0 rdf:first _:437fc0; rdf:rest _:438070 . _:437fc0 a owl:Class; owl:intersectionOf _:437ff0 . _:437ff0 rdf:first _:437fe0; rdf:rest _:438050 . _:437fe0 a owl:Restriction; 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owl:onProperty ; owl:someValuesFrom . _:438140 rdf:first _:438130; rdf:rest rdf:nil . _:438130 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:438160 rdf:first _:438150; rdf:rest rdf:nil . _:438150 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; owl:equivalentClass _:438170; rdfs:subClassOf , _:438260; "An association of rattus gut microbiota with arthritis that shows an expansion of Streptococcus pyogenes in rattus with arthritis compared with healthy controls."; "Haihe Wang, Hong Yu, Yongqun He"; "https://www.ncbi.nlm.nih.gov/pubmed/1572097/"; rdfs:label "expansion of Streptococcus pyogenes in arthritis rat gut"@en . _:438170 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:438180 . _:438180 a owl:Class; owl:intersectionOf _:438190 . _:438190 rdf:first ; rdf:rest _:4381b0 . _:4381b0 rdf:first _:4381a0; rdf:rest _:438250 . _:4381a0 a owl:Class; owl:intersectionOf _:4381d0 . _:4381d0 rdf:first _:4381c0; rdf:rest _:438230 . _:4381c0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:4381e0 . _:4381e0 a owl:Class; owl:intersectionOf _:4381f0 . _:4381f0 rdf:first ; rdf:rest _:438210 . _:438210 rdf:first _:438200; rdf:rest rdf:nil . _:438200 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:438230 rdf:first _:438220; rdf:rest rdf:nil . _:438220 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:438250 rdf:first _:438240; rdf:rest rdf:nil . _:438240 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:438260 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:438270 . _:438270 a owl:Class; owl:intersectionOf _:438280 . _:438280 rdf:first ; rdf:rest _:4382a0 . _:4382a0 rdf:first _:438290; rdf:rest _:438340 . _:438290 a owl:Class; owl:intersectionOf _:4382c0 . _:4382c0 rdf:first _:4382b0; rdf:rest _:438320 . _:4382b0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:4382d0 . _:4382d0 a owl:Class; owl:intersectionOf _:4382e0 . _:4382e0 rdf:first ; rdf:rest _:438300 . _:438300 rdf:first _:4382f0; rdf:rest rdf:nil . _:4382f0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:438320 rdf:first _:438310; rdf:rest rdf:nil . _:438310 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:438340 rdf:first _:438330; rdf:rest rdf:nil . _:438330 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:438350; "A musculus gut-microbiome interaction that is associated with arthritis"; "Haihe Wang, Hong Yu, Yongqun He"; "association of mouse gut microbiota with arthritis"@en; rdfs:label "arthritis mouse-gut microbiome interaction" . _:438350 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:438360 . _:438360 a owl:Class; owl:intersectionOf _:438370 . _:438370 rdf:first ; rdf:rest _:438390 . _:438390 rdf:first _:438380; rdf:rest rdf:nil . _:438380 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; owl:equivalentClass _:4383a0; rdfs:subClassOf , _:438490; "An association of musuculus gut microbiota with arthritis that shows an expansion of Prevotella copri in musuculus with arthritis compared with healthy controls."; "Haihe Wang, Hong Yu, Yongqun He"; "https://www.ncbi.nlm.nih.gov/pubmed/22553482/", "https://www.ncbi.nlm.nih.gov/pubmed/27789760/"; rdfs:label "expansion of Prevotella copri in arthritis mouse gut"@en . _:4383a0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:4383b0 . _:4383b0 a owl:Class; owl:intersectionOf _:4383c0 . _:4383c0 rdf:first ; rdf:rest _:4383e0 . _:4383e0 rdf:first _:4383d0; rdf:rest _:438480 . _:4383d0 a owl:Class; owl:intersectionOf _:438400 . _:438400 rdf:first _:4383f0; rdf:rest _:438460 . _:4383f0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:438410 . _:438410 a owl:Class; owl:intersectionOf _:438420 . _:438420 rdf:first ; rdf:rest _:438440 . _:438440 rdf:first _:438430; rdf:rest rdf:nil . _:438430 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:438460 rdf:first _:438450; rdf:rest rdf:nil . _:438450 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:438480 rdf:first _:438470; rdf:rest rdf:nil . _:438470 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:438490 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:4384a0 . _:4384a0 a owl:Class; owl:intersectionOf _:4384b0 . _:4384b0 rdf:first ; rdf:rest _:4384d0 . _:4384d0 rdf:first _:4384c0; rdf:rest _:438570 . _:4384c0 a owl:Class; owl:intersectionOf _:4384f0 . _:4384f0 rdf:first _:4384e0; rdf:rest _:438550 . _:4384e0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:438500 . _:438500 a owl:Class; owl:intersectionOf _:438510 . _:438510 rdf:first ; rdf:rest _:438530 . _:438530 rdf:first _:438520; rdf:rest rdf:nil . _:438520 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:438550 rdf:first _:438540; rdf:rest rdf:nil . _:438540 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:438570 rdf:first _:438560; rdf:rest rdf:nil . _:438560 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; owl:equivalentClass _:438580; rdfs:subClassOf , _:438670; "An association of musculus gut microbiota with arthritis that shows a depleted quantity of Actinobacteria in musculus with arthritis compared with healty controls."; "Haihe Wang, Hong Yu, Yongqun He"; "https://www.ncbi.nlm.nih.gov/pubmed/?term=22553482", "https://www.ncbi.nlm.nih.gov/pubmed/?term=27789760"; rdfs:label "Actinobacteria depletion in arthritis mouse gut"@en . _:438580 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:438590 . _:438590 a owl:Class; owl:intersectionOf _:4385a0 . _:4385a0 rdf:first ; rdf:rest _:4385c0 . _:4385c0 rdf:first _:4385b0; rdf:rest _:438660 . _:4385b0 a owl:Class; owl:intersectionOf _:4385e0 . _:4385e0 rdf:first _:4385d0; rdf:rest _:438640 . _:4385d0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:4385f0 . _:4385f0 a owl:Class; owl:intersectionOf _:438600 . _:438600 rdf:first ; rdf:rest _:438620 . _:438620 rdf:first _:438610; rdf:rest rdf:nil . _:438610 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:438640 rdf:first _:438630; rdf:rest rdf:nil . _:438630 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:438660 rdf:first _:438650; rdf:rest rdf:nil . _:438650 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:438670 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:438680 . _:438680 a owl:Class; owl:intersectionOf _:438690 . _:438690 rdf:first ; rdf:rest _:4386b0 . _:4386b0 rdf:first _:4386a0; rdf:rest _:4386d0 . _:4386a0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:4386d0 rdf:first _:4386c0; rdf:rest rdf:nil . _:4386c0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; owl:equivalentClass _:4386e0; rdfs:subClassOf , _:4387d0; "An association of musculus gut microbiota with arthritis that shows a depleted quantity of Bacteroides in musculus with arthritis compared with healty controls."; "Haihe Wang, Hong Yu, Yongqun He"; "https://www.ncbi.nlm.nih.gov/pubmed/?term=22553482", "https://www.ncbi.nlm.nih.gov/pubmed/?term=27789760"; rdfs:label "Bacteroides depletion in arthritis mouse gut"@en . _:4386e0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:4386f0 . _:4386f0 a owl:Class; owl:intersectionOf _:438700 . _:438700 rdf:first ; rdf:rest _:438720 . _:438720 rdf:first _:438710; rdf:rest _:4387c0 . _:438710 a owl:Class; owl:intersectionOf _:438740 . _:438740 rdf:first _:438730; rdf:rest _:4387a0 . _:438730 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:438750 . _:438750 a owl:Class; owl:intersectionOf _:438760 . _:438760 rdf:first ; rdf:rest _:438780 . _:438780 rdf:first _:438770; rdf:rest rdf:nil . _:438770 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:4387a0 rdf:first _:438790; rdf:rest rdf:nil . _:438790 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:4387c0 rdf:first _:4387b0; rdf:rest rdf:nil . _:4387b0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:4387d0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:4387e0 . _:4387e0 a owl:Class; owl:intersectionOf _:4387f0 . _:4387f0 rdf:first ; rdf:rest _:438810 . _:438810 rdf:first _:438800; rdf:rest _:438830 . _:438800 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:438830 rdf:first _:438820; rdf:rest rdf:nil . _:438820 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; owl:equivalentClass _:438840; rdfs:subClassOf , _:438930, _:438940; "an AS human-gut microbiome interaction that shows an expansion of Dialister in patients with AS compared with healthy controls."; "Haihe Wang, Hong Yu, Yongqun He"; "https://www.ncbi.nlm.nih.gov/pubmed/27390077/"; rdfs:label "expansion of Dialister in AS human gut"@en . _:438840 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:438850 . _:438850 a owl:Class; owl:intersectionOf _:438860 . _:438860 rdf:first ; rdf:rest _:438880 . _:438880 rdf:first _:438870; rdf:rest _:4388a0 . _:438870 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:4388a0 rdf:first _:438890; rdf:rest rdf:nil . _:438890 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:4388b0 . _:4388b0 a owl:Class; owl:intersectionOf _:4388c0 . _:4388c0 rdf:first ; rdf:rest _:4388e0 . _:4388e0 rdf:first _:4388d0; rdf:rest rdf:nil . _:4388d0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:4388f0 . _:4388f0 a owl:Class; 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rdf:rest rdf:nil . _:438a00 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:438a30 rdf:first _:438a20; rdf:rest rdf:nil . _:438a20 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . rdfs:subClassOf _:438a40; "An association of musculus gut microbiota with system lupus erythematosus(SLE) that shows an expansion of Alistipes in musculus with SLE compared with healthy controls."; "Haihe Wang, Hong Yu, Yongqun He"; "https://www.ncbi.nlm.nih.gov/pubmed/25261516/"; rdfs:label "expansion of Alistipes in SLE mouse gut"@en . _:438a40 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:438a50 . _:438a50 a owl:Class; owl:intersectionOf _:438a60 . _:438a60 rdf:first ; rdf:rest _:438a80 . _:438a80 rdf:first _:438a70; rdf:rest _:438b20 . _:438a70 a owl:Class; owl:intersectionOf _:438aa0 . _:438aa0 rdf:first _:438a90; rdf:rest _:438b00 . _:438a90 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:438ab0 . _:438ab0 a owl:Class; owl:intersectionOf _:438ac0 . _:438ac0 rdf:first ; 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rdf:rest rdf:nil . _:438b80 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:438ba0 . _:438ba0 a owl:Class; owl:intersectionOf _:438bb0 . _:438bb0 rdf:first ; rdf:rest _:438bd0 . _:438bd0 rdf:first _:438bc0; rdf:rest rdf:nil . _:438bc0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:438be0 . _:438be0 a owl:Class; owl:intersectionOf _:438bf0 . _:438bf0 rdf:first ; rdf:rest _:438c10 . _:438c10 rdf:first _:438c00; rdf:rest rdf:nil . _:438c00 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:438c20 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:438c30 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; owl:equivalentClass _:438c40; rdfs:subClassOf , _:438d30, _:438d40; "a SLE human-gut microbiome interaction that shows an expansion of Bacteroidales in patients with SLE compared with healthy controls."; "Haihe Wang, Hong Yu, Yongqun He"; "https://www.ncbi.nlm.nih.gov/pubmed/25271284/"; rdfs:label "expansion of Bacteroidales in SLE human gut"@en . _:438c40 a owl:Restriction; 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"a SLE human-gut microbiome interaction that shows an decrease of Vibrio in patients with SLEcompared with healthy controls."; "Haihe Wang, Hong Yu, Yongqun He"; "https://www.ncbi.nlm.nih.gov/pubmed/?term=25271284"; rdfs:label "depletion of Clostridia in SLE human gut"@en . _:438d50 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:438d60 . _:438d60 a owl:Class; owl:intersectionOf _:438d70 . _:438d70 rdf:first ; rdf:rest _:438d90 . _:438d90 rdf:first _:438d80; rdf:rest _:438db0 . _:438d80 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:438db0 rdf:first _:438da0; rdf:rest rdf:nil . _:438da0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:438dc0 . _:438dc0 a owl:Class; owl:intersectionOf _:438dd0 . _:438dd0 rdf:first ; rdf:rest _:438df0 . _:438df0 rdf:first _:438de0; rdf:rest rdf:nil . _:438de0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:438e00 . _:438e00 a owl:Class; owl:intersectionOf _:438e10 . _:438e10 rdf:first ; rdf:rest _:438e30 . _:438e30 rdf:first _:438e20; 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owl:onProperty ; owl:someValuesFrom . _:439400 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; owl:equivalentClass _:439410; rdfs:subClassOf , _:439500, _:439510; "RA human respiratory airway microbiome interaction that shows an expansion of Micrococcus in patients with RA compared with healthy controls."; "Haihe Wang, Hong Yu, Yongqun He"; "https://www.ncbi.nlm.nih.gov/pubmed/27855721/"; rdfs:label "expansion of Micrococcus in RA human respiratory airway"@en . _:439410 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:439420 . _:439420 a owl:Class; owl:intersectionOf _:439430 . _:439430 rdf:first ; rdf:rest _:439450 . _:439450 rdf:first _:439440; rdf:rest _:439470 . _:439440 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:439470 rdf:first _:439460; rdf:rest rdf:nil . _:439460 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:439480 . _:439480 a owl:Class; owl:intersectionOf _:439490 . _:439490 rdf:first ; rdf:rest _:4394b0 . _:4394b0 rdf:first _:4394a0; rdf:rest rdf:nil . _:4394a0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:4394c0 . _:4394c0 a owl:Class; owl:intersectionOf _:4394d0 . _:4394d0 rdf:first ; rdf:rest _:4394f0 . _:4394f0 rdf:first _:4394e0; rdf:rest rdf:nil . _:4394e0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:439500 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:439510 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; owl:equivalentClass _:439520; rdfs:subClassOf , _:439610, _:439620; "RA human respiratory airway microbiome interaction that shows an expansion of Methylobacterium in patients with RA compared with healthy controls."; "Haihe Wang, Hong Yu, Yongqun He"; "https://www.ncbi.nlm.nih.gov/pubmed/27855721"; rdfs:label "expansion of Methylobacterium in RA human respiratory airway"@en . _:439520 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:439530 . _:439530 a owl:Class; owl:intersectionOf _:439540 . _:439540 rdf:first ; rdf:rest _:439560 . _:439560 rdf:first _:439550; rdf:rest _:439580 . _:439550 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:439580 rdf:first _:439570; rdf:rest rdf:nil . _:439570 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:439590 . _:439590 a owl:Class; owl:intersectionOf _:4395a0 . _:4395a0 rdf:first ; rdf:rest _:4395c0 . _:4395c0 rdf:first _:4395b0; rdf:rest rdf:nil . _:4395b0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:4395d0 . _:4395d0 a owl:Class; owl:intersectionOf _:4395e0 . _:4395e0 rdf:first ; rdf:rest _:439600 . _:439600 rdf:first _:4395f0; rdf:rest rdf:nil . _:4395f0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:439610 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:439620 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; owl:equivalentClass _:439630; rdfs:subClassOf , _:439700; "a diarrheal patient-gut microbiome interaction that shows an increase of Prevotella in patients in the gut of human diarrheal patient compared with healthy controls."; 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"Haihe Wang, Hong Yu, Yongqun He"; "https://www.ncbi.nlm.nih.gov/pubmed/28376066/"; rdfs:label "expansion of Eggerthella in RA human gut"@en . _:439710 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:439720 . _:439720 a owl:Class; owl:intersectionOf _:439730 . _:439730 rdf:first ; rdf:rest _:439750 . _:439750 rdf:first _:439740; rdf:rest _:439770 . _:439740 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:439770 rdf:first _:439760; rdf:rest rdf:nil . _:439760 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:439780 . _:439780 a owl:Class; owl:intersectionOf _:439790 . _:439790 rdf:first ; rdf:rest _:4397b0 . _:4397b0 rdf:first _:4397a0; rdf:rest rdf:nil . _:4397a0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:4397c0 . _:4397c0 a owl:Class; owl:intersectionOf _:4397d0 . _:4397d0 rdf:first ; rdf:rest _:4397f0 . _:4397f0 rdf:first _:4397e0; rdf:rest rdf:nil . _:4397e0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:439800 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:439810 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; owl:equivalentClass _:439820; rdfs:subClassOf , _:439910, _:439920; "an AS human oral cavity microbiome interaction that shows an expansion of rare taxa,Treponema denticola in patients with AS compared with healthy controls."; "Haihe Wang, Hong Yu, Yongqun He"; "https://www.ncbi.nlm.nih.gov/pubmed/26002454/"; rdfs:label "expansion of Treponema denticola in AS human oral cavity"@en . _:439820 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:439830 . _:439830 a owl:Class; owl:intersectionOf _:439840 . _:439840 rdf:first ; rdf:rest _:439860 . _:439860 rdf:first _:439850; rdf:rest _:439880 . _:439850 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:439880 rdf:first _:439870; rdf:rest rdf:nil . _:439870 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:439890 . _:439890 a owl:Class; owl:intersectionOf _:4398a0 . _:4398a0 rdf:first ; rdf:rest _:4398c0 . _:4398c0 rdf:first _:4398b0; rdf:rest rdf:nil . _:4398b0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:4398d0 . _:4398d0 a owl:Class; owl:intersectionOf _:4398e0 . _:4398e0 rdf:first ; rdf:rest _:439900 . _:439900 rdf:first _:4398f0; rdf:rest rdf:nil . _:4398f0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:439910 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:439920 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; owl:equivalentClass _:439930; rdfs:subClassOf , _:439a20, _:439a30; "an AS human-gut microbiome interaction that shows an expansion of Rikenellaceae in patients with AS compared with healthy controls."; "Haihe Wang, Hong Yu, Yongqun He"; "https://www.ncbi.nlm.nih.gov/pubmed/25417597/", "https://www.ncbi.nlm.nih.gov/pubmed/26362730/"; rdfs:label "expansion of Rikenellaceae in AS human gut"@en . _:439930 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:439940 . _:439940 a owl:Class; owl:intersectionOf _:439950 . _:439950 rdf:first ; rdf:rest _:439970 . _:439970 rdf:first _:439960; rdf:rest _:439990 . _:439960 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:439990 rdf:first _:439980; rdf:rest rdf:nil . _:439980 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:4399a0 . _:4399a0 a owl:Class; owl:intersectionOf _:4399b0 . _:4399b0 rdf:first ; rdf:rest _:4399d0 . _:4399d0 rdf:first _:4399c0; rdf:rest rdf:nil . _:4399c0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:4399e0 . _:4399e0 a owl:Class; owl:intersectionOf _:4399f0 . _:4399f0 rdf:first ; rdf:rest _:439a10 . _:439a10 rdf:first _:439a00; rdf:rest rdf:nil . _:439a00 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:439a20 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:439a30 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; owl:equivalentClass _:439a40; rdfs:subClassOf , _:439b10, _:439b20; "an AS human-gut microbiome interaction that shows an expansion of Porphyromonas macacae in patients with AS compared with healthy controls."; "Haihe Wang, Hong Yu, Yongqun He"; 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rdfs:subClassOf , _:439c20; "An association of rattus gut microbiota with ankylosing spondylitis(AS) that shows a depleted quantity of Rikenellaceae in rattus with AS compared with healty controls."; "Haihe Wang, Hong Yu, Yongqun He"; "https://www.ncbi.nlm.nih.gov/pubmed/?term=25140823"; rdfs:label "Rikenellaceae depletion in AS rat gut"@en . _:439b30 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:439b40 . _:439b40 a owl:Class; owl:intersectionOf _:439b50 . _:439b50 rdf:first ; rdf:rest _:439b70 . _:439b70 rdf:first _:439b60; rdf:rest _:439c10 . _:439b60 a owl:Class; owl:intersectionOf _:439b90 . _:439b90 rdf:first _:439b80; rdf:rest _:439bf0 . _:439b80 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:439ba0 . _:439ba0 a owl:Class; owl:intersectionOf _:439bb0 . _:439bb0 rdf:first ; rdf:rest _:439bd0 . _:439bd0 rdf:first _:439bc0; rdf:rest rdf:nil . _:439bc0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:439bf0 rdf:first _:439be0; rdf:rest rdf:nil . _:439be0 a owl:Restriction; 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owl:intersectionOf _:439cb0 . _:439cb0 rdf:first ; rdf:rest _:439cd0 . _:439cd0 rdf:first _:439cc0; rdf:rest _:439cf0 . _:439cc0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:439cf0 rdf:first _:439ce0; rdf:rest rdf:nil . _:439ce0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:439d00 . _:439d00 a owl:Class; owl:intersectionOf _:439d10 . _:439d10 rdf:first ; rdf:rest _:439d30 . _:439d30 rdf:first _:439d20; rdf:rest rdf:nil . _:439d20 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:439d40 . _:439d40 a owl:Class; owl:intersectionOf _:439d50 . _:439d50 rdf:first ; rdf:rest _:439d70 . _:439d70 rdf:first _:439d60; rdf:rest rdf:nil . _:439d60 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:439d80 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:439d90 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; owl:equivalentClass _:439da0; rdfs:subClassOf , _:439e90, _:439ea0; "a SLE human-gut microbiome interaction that shows an expansion of Eubacterium in patients with SLE compared with healthy controls."; "Haihe Wang, Hong Yu, Yongqun He"; "https://www.ncbi.nlm.nih.gov/pubmed/27980687/"; rdfs:label "expansion of Eubacterium in SLE human gut"@en . _:439da0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:439db0 . _:439db0 a owl:Class; owl:intersectionOf _:439dc0 . _:439dc0 rdf:first ; rdf:rest _:439de0 . _:439de0 rdf:first _:439dd0; rdf:rest _:439e00 . _:439dd0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:439e00 rdf:first _:439df0; rdf:rest rdf:nil . _:439df0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:439e10 . _:439e10 a owl:Class; owl:intersectionOf _:439e20 . _:439e20 rdf:first ; rdf:rest _:439e40 . _:439e40 rdf:first _:439e30; rdf:rest rdf:nil . _:439e30 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:439e50 . _:439e50 a owl:Class; owl:intersectionOf _:439e60 . _:439e60 rdf:first ; rdf:rest _:439e80 . _:439e80 rdf:first _:439e70; rdf:rest rdf:nil . _:439e70 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:439e90 a owl:Restriction; 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owl:someValuesFrom . _:43a020 rdf:first _:43a010; rdf:rest rdf:nil . _:43a010 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:43a030 . _:43a030 a owl:Class; owl:intersectionOf _:43a040 . _:43a040 rdf:first ; rdf:rest _:43a060 . _:43a060 rdf:first _:43a050; rdf:rest rdf:nil . _:43a050 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:43a070 . _:43a070 a owl:Class; owl:intersectionOf _:43a080 . _:43a080 rdf:first ; rdf:rest _:43a0a0 . _:43a0a0 rdf:first _:43a090; rdf:rest rdf:nil . _:43a090 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:43a0b0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:43a0c0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; owl:equivalentClass _:43a0d0; rdfs:subClassOf , _:43a1c0, _:43a1d0; "a RA human oral cavity microbiome interaction that shows an expansion of rare taxa,Atopobium sp. in patients with RA compared with healthy controls."; "Haihe Wang, Hong Yu, Yongqun He"; "https://www.ncbi.nlm.nih.gov/pubmed/26214836"; rdfs:label "expansion of Atopobium sp. in RA human oral cavity"@en . _:43a0d0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:43a0e0 . _:43a0e0 a owl:Class; owl:intersectionOf _:43a0f0 . _:43a0f0 rdf:first ; rdf:rest _:43a110 . _:43a110 rdf:first _:43a100; rdf:rest _:43a130 . _:43a100 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:43a130 rdf:first _:43a120; rdf:rest rdf:nil . _:43a120 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:43a140 . _:43a140 a owl:Class; owl:intersectionOf _:43a150 . _:43a150 rdf:first ; rdf:rest _:43a170 . _:43a170 rdf:first _:43a160; rdf:rest rdf:nil . _:43a160 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:43a180 . _:43a180 a owl:Class; owl:intersectionOf _:43a190 . _:43a190 rdf:first ; rdf:rest _:43a1b0 . _:43a1b0 rdf:first _:43a1a0; rdf:rest rdf:nil . _:43a1a0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:43a1c0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:43a1d0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; owl:equivalentClass _:43a1e0; rdfs:subClassOf , _:43a2d0, _:43a2e0; "a SLE human-gut microbiome interaction that shows an expansion of Eggerthella in patients with SLE compared with healthy controls."; "Haihe Wang, Hong Yu, Yongqun He"; "https://www.ncbi.nlm.nih.gov/pubmed/27980687/"; rdfs:label "expansion of Eggerthella in SLE human gut"@en . _:43a1e0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:43a1f0 . _:43a1f0 a owl:Class; owl:intersectionOf _:43a200 . _:43a200 rdf:first ; rdf:rest _:43a220 . _:43a220 rdf:first _:43a210; rdf:rest _:43a240 . _:43a210 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:43a240 rdf:first _:43a230; rdf:rest rdf:nil . _:43a230 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:43a250 . _:43a250 a owl:Class; owl:intersectionOf _:43a260 . _:43a260 rdf:first ; rdf:rest _:43a280 . _:43a280 rdf:first _:43a270; rdf:rest rdf:nil . _:43a270 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:43a290 . _:43a290 a owl:Class; 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rdf:rest rdf:nil . _:43a340 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:43a360 . _:43a360 a owl:Class; owl:intersectionOf _:43a370 . _:43a370 rdf:first ; rdf:rest _:43a390 . _:43a390 rdf:first _:43a380; rdf:rest rdf:nil . _:43a380 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:43a3a0 . _:43a3a0 a owl:Class; owl:intersectionOf _:43a3b0 . _:43a3b0 rdf:first ; rdf:rest _:43a3d0 . _:43a3d0 rdf:first _:43a3c0; rdf:rest rdf:nil . _:43a3c0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:43a3e0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:43a3f0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; owl:equivalentClass _:43a400; rdfs:subClassOf , _:43a4f0, _:43a500; "a SLE human oral cavity microbiome interaction that shows an decrease of Pseudomonas sp. in patients with SLE compared with healthy controls."; "Haihe Wang, Hong Yu, Yongqun He"; "https://www.ncbi.nlm.nih.gov/pubmed/?term=28320468"; rdfs:label "depletion of Pseudomonas sp. in SLE human oral cavity"@en . _:43a400 a owl:Restriction; 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"a SLE human oral cavity microbiome interaction that shows an decrease of Treponema maltophilum in patients with SLE compared with healthy controls."; "Haihe Wang, Hong Yu, Yongqun He"; "https://www.ncbi.nlm.nih.gov/pubmed/?term=28320468"; rdfs:label "depletion of Treponema maltophilum in SLE human oral cavity"@en . _:43a510 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:43a520 . _:43a520 a owl:Class; owl:intersectionOf _:43a530 . _:43a530 rdf:first ; rdf:rest _:43a550 . _:43a550 rdf:first _:43a540; rdf:rest _:43a570 . _:43a540 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:43a570 rdf:first _:43a560; rdf:rest rdf:nil . _:43a560 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:43a580 . _:43a580 a owl:Class; owl:intersectionOf _:43a590 . _:43a590 rdf:first ; rdf:rest _:43a5b0 . _:43a5b0 rdf:first _:43a5a0; rdf:rest rdf:nil . _:43a5a0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:43a5c0 . _:43a5c0 a owl:Class; owl:intersectionOf _:43a5d0 . _:43a5d0 rdf:first ; 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"a SLE human oral cavity microbiome interaction that shows a depletion of Haemophilus parainfluenzae in patients with SLE compared with healthy controls."; "Haihe Wang, Hong Yu, Yongqun He"; "https://www.ncbi.nlm.nih.gov/pubmed/?term=28320468"; rdfs:label "depletion of Haemophilus parainfluenzae in SLE human oral cavity"@en . _:43a840 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:43a850 . _:43a850 a owl:Class; owl:intersectionOf _:43a860 . _:43a860 rdf:first ; rdf:rest _:43a880 . _:43a880 rdf:first _:43a870; rdf:rest _:43a8a0 . _:43a870 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:43a8a0 rdf:first _:43a890; rdf:rest rdf:nil . _:43a890 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:43a8b0 . _:43a8b0 a owl:Class; owl:intersectionOf _:43a8c0 . _:43a8c0 rdf:first ; rdf:rest _:43a8e0 . _:43a8e0 rdf:first _:43a8d0; rdf:rest rdf:nil . _:43a8d0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:43a8f0 . _:43a8f0 a owl:Class; owl:intersectionOf _:43a900 . _:43a900 rdf:first ; 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"a SLE human oral cavity microbiome interaction that shows an expansion of Fusobacterium in patients with SLE compared with healthy controls."; "Haihe Wang, Hong Yu, Yongqun He"; "https://www.ncbi.nlm.nih.gov/pubmed/28320468"; rdfs:label "expansion of Fusobacterium in SLE human oral cavity"@en . _:43ab70 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:43ab80 . _:43ab80 a owl:Class; owl:intersectionOf _:43ab90 . _:43ab90 rdf:first ; rdf:rest _:43abb0 . _:43abb0 rdf:first _:43aba0; rdf:rest _:43abd0 . _:43aba0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:43abd0 rdf:first _:43abc0; rdf:rest rdf:nil . _:43abc0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:43abe0 . _:43abe0 a owl:Class; owl:intersectionOf _:43abf0 . _:43abf0 rdf:first ; rdf:rest _:43ac10 . _:43ac10 rdf:first _:43ac00; rdf:rest rdf:nil . _:43ac00 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:43ac20 . _:43ac20 a owl:Class; owl:intersectionOf _:43ac30 . _:43ac30 rdf:first ; rdf:rest _:43ac50 . _:43ac50 rdf:first _:43ac40; 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owl:onProperty ; owl:someValuesFrom . _:43be90 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; owl:equivalentClass _:43bea0; rdfs:subClassOf , _:43bf90, _:43bfa0; "an ERA human-gut microbiome interaction that shows an expansion of Klebsiella in patients with ERA compared with healthy controls."; "Haihe Wang, Hong Yu, Yongqun He"; "https://www.ncbi.nlm.nih.gov/pubmed/27861762"; rdfs:label "expansion of Klebsiella in ERA human gut"@en . _:43bea0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:43beb0 . _:43beb0 a owl:Class; owl:intersectionOf _:43bec0 . _:43bec0 rdf:first ; rdf:rest _:43bee0 . _:43bee0 rdf:first _:43bed0; rdf:rest _:43bf00 . _:43bed0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:43bf00 rdf:first _:43bef0; rdf:rest rdf:nil . _:43bef0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:43bf10 . _:43bf10 a owl:Class; owl:intersectionOf _:43bf20 . _:43bf20 rdf:first ; rdf:rest _:43bf40 . _:43bf40 rdf:first _:43bf30; rdf:rest rdf:nil . _:43bf30 a owl:Restriction; 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owl:onProperty ; owl:someValuesFrom . _:43c930 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; owl:equivalentClass _:43c940; rdfs:subClassOf , _:43ca30, _:43ca40; "an ERA human-gut microbiome interaction that shows an decrease of [Clostridium] clostridioforme in patients with ERA compared with healthy controls."; "Haihe Wang, Hong Yu, Yongqun He"; "https://www.ncbi.nlm.nih.gov/pubmed/?term=25434931" . _:43c940 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:43c950 . _:43c950 a owl:Class; owl:intersectionOf _:43c960 . _:43c960 rdf:first ; rdf:rest _:43c980 . _:43c980 rdf:first _:43c970; rdf:rest _:43c9a0 . _:43c970 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:43c9a0 rdf:first _:43c990; rdf:rest rdf:nil . _:43c990 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:43c9b0 . _:43c9b0 a owl:Class; owl:intersectionOf _:43c9c0 . _:43c9c0 rdf:first ; rdf:rest _:43c9e0 . _:43c9e0 rdf:first _:43c9d0; rdf:rest rdf:nil . _:43c9d0 a owl:Restriction; 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rdf:rest _:43cab0 . _:43ca80 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:43cab0 rdf:first _:43caa0; rdf:rest rdf:nil . _:43caa0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:43cac0 . _:43cac0 a owl:Class; owl:intersectionOf _:43cad0 . _:43cad0 rdf:first ; rdf:rest _:43caf0 . _:43caf0 rdf:first _:43cae0; rdf:rest rdf:nil . _:43cae0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:43cb00 . _:43cb00 a owl:Class; owl:intersectionOf _:43cb10 . _:43cb10 rdf:first ; rdf:rest _:43cb30 . _:43cb30 rdf:first _:43cb20; rdf:rest rdf:nil . _:43cb20 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:43cb40 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:43cb50 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; owl:equivalentClass _:43cb60; rdfs:subClassOf , _:43cc50, _:43cc60; "an ERA human-gut microbiome interaction that shows an expansion of Akkermansia muciniphila in patients with ERA compared with healthy controls."; "Haihe Wang, Hong Yu, Yongqun He"; 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owl:onProperty ; owl:someValuesFrom . _:43d090 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; owl:equivalentClass _:43d0a0; rdfs:subClassOf , _:43d190, _:43d1a0; "an ERA human-gut microbiome interaction that shows an expansion of Yersinia in patients with ERA compared with healthy controls."; "Haihe Wang, Hong Yu, Yongqun He"; "https://www.ncbi.nlm.nih.gov/pubmed/21679096"; rdfs:label "expansion of Yersinia in ERA human gut"@en . _:43d0a0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:43d0b0 . _:43d0b0 a owl:Class; owl:intersectionOf _:43d0c0 . _:43d0c0 rdf:first ; rdf:rest _:43d0e0 . _:43d0e0 rdf:first _:43d0d0; rdf:rest _:43d100 . _:43d0d0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:43d100 rdf:first _:43d0f0; rdf:rest rdf:nil . _:43d0f0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:43d110 . _:43d110 a owl:Class; owl:intersectionOf _:43d120 . _:43d120 rdf:first ; rdf:rest _:43d140 . _:43d140 rdf:first _:43d130; rdf:rest rdf:nil . _:43d130 a owl:Restriction; 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rdf:rest rdf:nil . _:43ee50 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:43ee70 . _:43ee70 a owl:Class; owl:intersectionOf _:43ee80 . _:43ee80 rdf:first ; rdf:rest _:43eea0 . _:43eea0 rdf:first _:43ee90; rdf:rest rdf:nil . _:43ee90 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:43eeb0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; owl:equivalentClass _:43eec0; rdfs:subClassOf , _:43efb0; "A colorectal cancer human-gut microbiome interaction where Microbacterium is decreased."; "YH, HW"; "https://www.ncbi.nlm.nih.gov/pubmed/21647227"; rdfs:comment "https://www.ncbi.nlm.nih.gov/pubmed/23497613"; rdfs:label "depletion of Microbacterium in colorectal cancer human gut"@en . _:43eec0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:43eed0 . _:43eed0 a owl:Class; owl:intersectionOf _:43eee0 . _:43eee0 rdf:first ; rdf:rest _:43ef00 . _:43ef00 rdf:first _:43eef0; rdf:rest _:43ef20 . _:43eef0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:43ef20 rdf:first _:43ef10; 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"A colorectal cancer human-gut microbiome interaction where Lachnobacterium bovis is decreased."; "YH, HW"; rdfs:comment "https://www.ncbi.nlm.nih.gov/pubmed/23940645"; rdfs:label "depletion of L. bovis in colorectal cancer human gut"@en . a owl:Class; owl:equivalentClass _:43f5c0; rdfs:subClassOf , _:43f6b0; "A colorectal cancer human-gut microbiome interaction where Lachnospira pectinoschiza is decreased."; "YH, HW"; rdfs:comment "https://www.ncbi.nlm.nih.gov/pubmed/23940645"; rdfs:label "depletion of L.pectinoschiza in colorectal cancer human gut"@en . _:43f5c0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:43f5d0 . _:43f5d0 a owl:Class; owl:intersectionOf _:43f5e0 . _:43f5e0 rdf:first ; rdf:rest _:43f600 . _:43f600 rdf:first _:43f5f0; rdf:rest _:43f620 . _:43f5f0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:43f620 rdf:first _:43f610; rdf:rest rdf:nil . _:43f610 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:43f630 . _:43f630 a owl:Class; owl:intersectionOf _:43f640 . _:43f640 rdf:first ; 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rdf:rest rdf:nil . _:43fc50 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:43fc70 . _:43fc70 a owl:Class; owl:intersectionOf _:43fc80 . _:43fc80 rdf:first ; rdf:rest _:43fca0 . _:43fca0 rdf:first _:43fc90; rdf:rest rdf:nil . _:43fc90 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:43fcb0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; owl:equivalentClass _:43fcc0; rdfs:subClassOf , _:43fdb0; "A colorectal cancer human-gut microbiome interaction where Phascolarctobacterium is increased."; "YH, HW"; rdfs:comment "https://www.ncbi.nlm.nih.gov/pubmed/ 23940645"; rdfs:label "expansion of Phascolarctobacterium in colorectal cancer human gut"@en . _:43fcc0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:43fcd0 . _:43fcd0 a owl:Class; owl:intersectionOf _:43fce0 . _:43fce0 rdf:first ; rdf:rest _:43fd00 . _:43fd00 rdf:first _:43fcf0; rdf:rest _:43fd20 . _:43fcf0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:43fd20 rdf:first _:43fd10; 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Bacteroides fragilis is a rare cause of septic arthritis."; "Haihe Wang, Hong Yu, Yongqun He"; "https://www.ncbi.nlm.nih.gov/pubmed/9456020"; rdfs:label "expansion of Bacteroides fragilis in RA human gut"@en . _:43fec0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:43fed0 . _:43fed0 a owl:Class; owl:intersectionOf _:43fee0 . _:43fee0 rdf:first ; rdf:rest _:43ff00 . _:43ff00 rdf:first _:43fef0; rdf:rest _:43ff20 . _:43fef0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:43ff20 rdf:first _:43ff10; rdf:rest rdf:nil . _:43ff10 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:43ff30 . _:43ff30 a owl:Class; owl:intersectionOf _:43ff40 . _:43ff40 rdf:first ; rdf:rest _:43ff60 . _:43ff60 rdf:first _:43ff50; rdf:rest rdf:nil . _:43ff50 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:43ff70 . _:43ff70 a owl:Class; owl:intersectionOf _:43ff80 . _:43ff80 rdf:first ; rdf:rest _:43ffa0 . _:43ffa0 rdf:first _:43ff90; rdf:rest rdf:nil . _:43ff90 a owl:Restriction; 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"YH, HW"; rdfs:comment "https://www.ncbi.nlm.nih.gov/pubmed/24194538"; rdfs:label "expansion of Odoribacter in colorectal cancer human gut"@en . _:4402d0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:4402e0 . _:4402e0 a owl:Class; owl:intersectionOf _:4402f0 . _:4402f0 rdf:first ; rdf:rest _:440310 . _:440310 rdf:first _:440300; rdf:rest _:440330 . _:440300 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:440330 rdf:first _:440320; rdf:rest rdf:nil . _:440320 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:440340 . _:440340 a owl:Class; owl:intersectionOf _:440350 . _:440350 rdf:first ; rdf:rest _:440370 . _:440370 rdf:first _:440360; rdf:rest rdf:nil . _:440360 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:440380 . _:440380 a owl:Class; owl:intersectionOf _:440390 . _:440390 rdf:first ; rdf:rest _:4403b0 . _:4403b0 rdf:first _:4403a0; rdf:rest rdf:nil . _:4403a0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:4403c0 a owl:Restriction; 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It is the negative of the base 10 logarithm of the activity of the hydrogen ion. At 25 °C, solutions with a pH less than 7 are acidic and solutions with a pH greater than 7 are basic."; "OH"; "https://en.wikipedia.org/wiki/PH"; rdfs:label "pH value"@en . a owl:Class; rdfs:subClassOf ; "A drug product that has its ability to alter the progression of a rheumatic disease."; "Oliver He"; "disease-modifying antirheumatic drug"; "https://en.wikipedia.org/wiki/Disease-modifying_antirheumatic_drug"; rdfs:label "DMARD"@en . a owl:Class; rdfs:subClassOf ; rdfs:comment "A community species diversity that exists in a microbiome ecosystem where different microbial species are found."; rdfs:label "microbial species diversity"@en . a owl:Class; rdfs:subClassOf ; "A quality of ecological community that refers to how common or rare a species is relative to other species in a defined location or community"; rdfs:label "relative species abundance"@en . a owl:Class; rdfs:subClassOf ; "A relative species abundance that refers to the microbial species abundance in a host ecosystem"; "Oliver He"; rdfs:label "relative abundance of microbe in host"@en . a owl:Class; rdfs:subClassOf ; "A genome from a microbe"; rdfs:label "microbial genome"@en . a owl:Class; rdfs:subClassOf owl:Thing; "the mean species diversity in sites or habitats at a local scale"; "α-diversity"; "https://en.wikipedia.org/wiki/Alpha_diversity"; ; "http://purl.obolibrary.org/obo/PCO_0000074"; rdfs:label "obsolete alpha diversity"@en; owl:deprecated true . a owl:Class; rdfs:subClassOf owl:Thing; "the ratio between regional and local species diversity"; "true beta diversity", "β-diversity"; "https://en.wikipedia.org/wiki/Beta_diversity"; ; "http://purl.obolibrary.org/obo/PCO_0000075"; rdfs:label "obsolete beta diversity"@en; owl:deprecated true . a owl:Class; rdfs:subClassOf owl:Thing; "the total species diversity in a landscape"; "γ-diversity"; "https://en.wikipedia.org/wiki/Gamma_diversity"; ; "http://purl.obolibrary.org/obo/PCO_0000076"; rdfs:label "obsolete gamma diversity"@en; owl:deprecated true . a owl:Class; rdfs:subClassOf ; "A biological process that leads to the restoration of microbial community in a host organism"; "Oliver He"; rdfs:label "host microbiome restoration"@en . a owl:Class; rdfs:subClassOf ; "A host microbiome restoration that is due to a treatment"; "Oliver He"; rdfs:label "host microbiome restoration by treatment"@en . a owl:Class; rdfs:subClassOf ; "host microbiome restoration by a DMARD treatment"; "Oliver He"; rdfs:label "host microbiome restoration by DMARD"@en . a owl:Class; rdfs:subClassOf ; "host microbiome restoration by an antibiotics treatment"; "Oliver He"; rdfs:label "host microbiome restoration by antibiotics"@en . a owl:Class; rdfs:subClassOf ; "host microbiome restoration through the transplantation of a microbiota into the host"; "Oliver He"; rdfs:label "host microbiome restoration by microbiota transplantation"@en . a owl:Class; rdfs:subClassOf ; "A microbe that is differentially enriched in a microbiome host and can serve as a marker for a dysbiosis"; "Oliver He"; rdfs:label "differentially enriched microbial marker for dysbiosis"@en . a owl:Class; rdfs:subClassOf ; "A microbe that is differentially enriched in a microbiome host and can serve as a marker for a disease"; "Oliver He"; rdfs:label "differentially enriched microbial marker for disease"@en . a owl:Class; rdfs:subClassOf ; "An host-microbiome interaction that involves the interaction between enteric microbiota on the host and the host brain (esp. the central nervous system), which often leads to a specific nervous phenotype"; "Oliver He, Kaiyong Liu"; "microbiome-gut-brain axis"; "https://www.ncbi.nlm.nih.gov/pubmed/21303428"; rdfs:label "microbiome-gut-brain interaction"@en . a owl:Class; rdfs:subClassOf ; "An host-microbiome interaction that is associated with cancer"; "Oliver He, Jianmin Wu"; rdfs:label "microbiome-cancer interaction"@en . a owl:Class; rdfs:subClassOf , ; "An interaction between microbiome and host immune system that is associated with cancer"; "Oliver He, Jianmin Wu"; "microbiome-immune-cancer axis"; "https://www.hindawi.com/journals/mi/2019/4107917/"; rdfs:label "microbiome-immune-cancer interaction"@en . a owl:Class; owl:equivalentClass _:4474f0; rdfs:subClassOf , _:447530; "An organism that has 'host role', i.e., a role played by an organism and realized by providing nourishment, shelter or a means of reproduction to another organism."; "Oliver He"; rdfs:label "host"@en . _:4474f0 a owl:Class; owl:intersectionOf _:447500 . _:447500 rdf:first ; rdf:rest _:447520 . _:447520 rdf:first _:447510; rdf:rest rdf:nil . _:447510 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . _:447530 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf ; "A human gut-microbiome interaction where the gut is specifically stomach."; "Oliver He, Yingtong Liu"; rdfs:label "human-stomach microbiome interaction"@en . a owl:Class; rdfs:subClassOf ; "A human respiratory airway microbiome interaction where he human is diseased with Chronic obstructive pulmonary disease (COPD)"; "Rena Wang, Oliver He"; rdfs:label "COPD human respiratory airway microbiome interaction"@en . a owl:Class; rdfs:subClassOf ; "Severity provided by the Global Initiative for Chronic Obstructive Lung Disease (“GOLD”) for indicating different severity levels of COPD."; "Rena Wang, Oliver He"; "https://goldcopd.org/"; rdfs:label "severity of COPD"@en . a owl:Class; rdfs:subClassOf ; rdfs:label "COPD human gut microbiome interaction"@en . a owl:Class; rdfs:subClassOf ; "COPD human respiratory airway microbiome interaction that shows an change of bacteria in patients with COPD compared with healthy controls."; "Yang Wang, Yongqun He"; rdfs:label "bacterial change in lung of COPD patient compared to healthy human"@en . a owl:Class; rdfs:subClassOf , _:447540; "COPD human respiratory airway microbiome interaction that shows an change of bacteria in patients with severe COPD compared to mild-moderate COPD."; "Rena Wang, Oliver He"; rdfs:label "bacterial change in lung of severe COPD patient compared to mild-moderate COPD"@en . _:447540 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:447550 . _:447550 a owl:Class; owl:intersectionOf _:447560 . _:447560 rdf:first ; rdf:rest _:447580 . _:447580 rdf:first _:447570; rdf:rest rdf:nil . _:447570 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf ; "A human oral cavity microbiome interaction where he human is diseased with Chronic obstructive pulmonary disease (COPD)"; "Yang Wang, Yongqun He"; rdfs:label "COPD human oral microbiome interaction"@en . a owl:Class; rdfs:subClassOf ; "A COPD human oral microbiome interaction that shows bacterial change in sputum of COPD patient compared to healthy human"; "Oliver He, Yang Wang"; rdfs:label "bacterial change in sputum of COPD patient compared to healthy human"@en . a owl:Class; rdfs:subClassOf ; rdfs:label "bacterial change in gut of COPD patient compared to healthy human"@en . a owl:Class; rdfs:subClassOf ; "A COPD human oral microbiome interaction that shows bacterial change in sputum of exacerbation COPD patient compared to stable COPD. Here the stable COPD means the ...."; "Yang Wang, Yongqun He"; rdfs:label "bacterial change in sputum of exacerbation COPD patient compared to stable COPD"@en . a owl:Class; rdfs:subClassOf ; "GOLD Stage 1 (Mild) is the initial stage of Chronic Obstructive Pulmonary Disease (COPD), characterized by mild airflow limitation with an (Forced Expiratory Volume in 1 second) 80% of the predicted value. While lung function is only slightly reduced, patients may experience chronic cough, sputum production, or occasional breathlessness."; "Rena Wang, Oliver He"; "https://www.ncbi.nlm.nih.gov/books/NBK580644/table/ch1.tab1/", "https://www.webmd.com/lung/copd/gold-criteria-for-copd"; rdfs:label "GOLD Stage 1"@en . a owl:Class; rdfs:subClassOf , _:447590; "COPD human respiratory airway microbiome interaction that shows an change of bacteria in patients with exacerbation COPD compared to stable COPD."; rdfs:label "bacterial change in lung of exacerbation COPD patient compared to stable COPD"@en . _:447590 a owl:Restriction; owl:onProperty ; owl:someValuesFrom _:4475a0 . _:4475a0 a owl:Class; owl:intersectionOf _:4475b0 . _:4475b0 rdf:first ; rdf:rest _:4475d0 . _:4475d0 rdf:first _:4475c0; rdf:rest rdf:nil . _:4475c0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:4475e0; "Proteobacteria up-regulated in the lung of COPD patient compared to healthy human."; "Jie Zheng", "Yang Wang", "Yongqun He"; "PMID:20052417"; rdfs:label "expansion of Proteobacteria in lung of COPD patient compared to healthy human" . _:4475e0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:4475f0; "Haemophilus up-regulated in the lung of COPD patient compared to healthy human."; "Jie Zheng", "Yang Wang", "Yongqun He"; "PMID:20052417"; rdfs:label "expansion of Haemophilus in lung of COPD patient compared to healthy human" . _:4475f0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:447600; "Haemophilus influenzae up-regulated in the lung of COPD patient compared to healthy human."; "Jie Zheng", "Yang Wang", "Yongqun He"; "PMID:16474030"; rdfs:label "expansion of Haemophilus influenzae in lung of COPD patient compared to healthy human" . _:447600 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:447610; "Haemophilus parainfluenzae up-regulated in the lung of COPD patient compared to healthy human."; "Jie Zheng", "Yang Wang", "Yongqun He"; "PMID:16474030"; rdfs:label "expansion of Haemophilus parainfluenzae in lung of COPD patient compared to healthy human" . _:447610 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:447620; "Staphylococcus aureus up-regulated in the lung of COPD patient compared to healthy human."; "Jie Zheng", "Yang Wang", "Yongqun He"; "PMID:16474030"; rdfs:label "expansion of Staphylococcus aureus in lung of COPD patient compared to healthy human" . _:447620 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:447630; "Streptococcus pneumoniae up-regulated in the lung of COPD patient compared to healthy human."; "Jie Zheng", "Yang Wang", "Yongqun He"; "PMID:16474030"; rdfs:label "expansion of Streptococcus pneumoniae in lung of COPD patient compared to healthy human" . _:447630 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:447640; "Pseudomonas aeruginosa up-regulated in the lung of COPD patient compared to healthy human."; "Jie Zheng", "Yang Wang", "Yongqun He"; "PMID:16474030"; rdfs:label "expansion of Pseudomonas aeruginosa in lung of COPD patient compared to healthy human" . _:447640 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:447650; "Neisseriaceae up-regulated in the lung of COPD patient compared to healthy human."; "Jie Zheng", "Yang Wang", "Yongqun He"; "PMID:25253795"; rdfs:label "expansion of Neisseriaceae in lung of COPD patient compared to healthy human" . _:447650 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:447660; "Coribacteriales up-regulated in the lung of COPD patient compared to healthy human."; "Jie Zheng", "Yang Wang", "Yongqun He"; "PMID:23071781"; rdfs:label "expansion of Coribacteriales in lung of COPD patient compared to healthy human" . _:447660 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:447670; "Coriobacteriaceae up-regulated in the lung of COPD patient compared to healthy human."; "Jie Zheng", "Yang Wang", "Yongqun He"; "PMID:23071781"; rdfs:label "expansion of Coriobacteriaceae in lung of COPD patient compared to healthy human" . _:447670 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:447680; "Atopobium up-regulated in the lung of COPD patient compared to healthy human."; "Jie Zheng", "Yang Wang", "Yongqun He"; "PMID:23071781"; rdfs:label "expansion of Atopobium in lung of COPD patient compared to healthy human" . _:447680 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:447690; "Cryptobacterium up-regulated in the lung of COPD patient compared to healthy human."; "Jie Zheng", "Yang Wang", "Yongqun He"; "PMID:23071781"; rdfs:label "expansion of Cryptobacterium in lung of COPD patient compared to healthy human" . _:447690 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:4476a0; "Olsenella up-regulated in the lung of COPD patient compared to healthy human."; "Jie Zheng", "Yang Wang", "Yongqun He"; "PMID:23071781"; rdfs:label "expansion of Olsenella in lung of COPD patient compared to healthy human" . _:4476a0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:4476b0; "Nocardioides up-regulated in the lung of COPD patient compared to healthy human."; "Jie Zheng", "Yang Wang", "Yongqun He"; "PMID:23071781"; rdfs:label "expansion of Nocardioides in lung of COPD patient compared to healthy human" . _:4476b0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:4476c0; "Micrococcaceae up-regulated in the lung of COPD patient compared to healthy human."; "Jie Zheng", "Yang Wang", "Yongqun He"; "PMID:23071781"; rdfs:label "expansion of Micrococcaceae in lung of COPD patient compared to healthy human" . _:4476c0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:4476d0; "Rothia up-regulated in the lung of COPD patient compared to healthy human."; "Jie Zheng", "Yang Wang", "Yongqun He"; "PMID:23071781"; rdfs:label "expansion of Rothia in lung of COPD patient compared to healthy human" . _:4476d0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:4476e0; "Actinomycetaceae up-regulated in the lung of COPD patient compared to healthy human."; "Jie Zheng", "Yang Wang", "Yongqun He"; "PMID:23071781"; rdfs:label "expansion of Actinomycetaceae in lung of COPD patient compared to healthy human" . _:4476e0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:4476f0; "Actinomyces up-regulated in the lung of COPD patient compared to healthy human."; "Jie Zheng", "Yang Wang", "Yongqun He"; "PMID:23071781"; rdfs:label "expansion of Actinomyces in lung of COPD patient compared to healthy human" . _:4476f0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:447700; "Bifidobacterium up-regulated in the lung of COPD patient compared to healthy human."; "Jie Zheng", "Yang Wang", "Yongqun He"; "PMID:23071781"; rdfs:label "expansion of Bifidobacterium in lung of COPD patient compared to healthy human" . _:447700 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:447710; "Lactobacillales up-regulated in the lung of COPD patient compared to healthy human."; "Jie Zheng", "Yang Wang", "Yongqun He"; "PMID:23071781"; rdfs:label "expansion of Lactobacillales in lung of COPD patient compared to healthy human" . _:447710 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:447720; "Streptococcaceae up-regulated in the lung of COPD patient compared to healthy human."; "Jie Zheng", "Yang Wang", "Yongqun He"; "PMID:23071781"; rdfs:label "expansion of Streptococcaceae in lung of COPD patient compared to healthy human" . _:447720 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:447730; "Streptococcus up-regulated in the lung of COPD patient compared to healthy human."; "Jie Zheng", "Yang Wang", "Yongqun He"; "PMID:23071781"; rdfs:label "expansion of Streptococcus in lung of COPD patient compared to healthy human" . _:447730 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:447740; "Aerococcaceae up-regulated in the lung of COPD patient compared to healthy human."; "Jie Zheng", "Yang Wang", "Yongqun He"; "PMID:23071781"; rdfs:label "expansion of Aerococcaceae in lung of COPD patient compared to healthy human" . _:447740 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:447750; "Abiotrophia up-regulated in the lung of COPD patient compared to healthy human."; "Jie Zheng", "Yang Wang", "Yongqun He"; "PMID:23071781"; rdfs:label "expansion of Abiotrophia in lung of COPD patient compared to healthy human" . _:447750 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:447760; "Erysipelotrichales up-regulated in the lung of COPD patient compared to healthy human."; "Jie Zheng", "Yang Wang", "Yongqun He"; "PMID:23071781"; rdfs:label "expansion of Erysipelotrichales in lung of COPD patient compared to healthy human" . _:447760 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:447770; "Erysipelotrichaceae up-regulated in the lung of COPD patient compared to healthy human."; "Jie Zheng", "Yang Wang", "Yongqun He"; "PMID:23071781"; rdfs:label "expansion of Erysipelotrichaceae in lung of COPD patient compared to healthy human" . _:447770 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:447780; "Bulleidia up-regulated in the lung of COPD patient compared to healthy human."; "Jie Zheng", "Yang Wang", "Yongqun He"; "PMID:23071781"; rdfs:label "expansion of Bulleidia in lung of COPD patient compared to healthy human" . _:447780 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:447790; "Solobacterium up-regulated in the lung of COPD patient compared to healthy human."; "Jie Zheng", "Yang Wang", "Yongqun He"; "PMID:23071781"; rdfs:label "expansion of Solobacterium in lung of COPD patient compared to healthy human" . _:447790 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:4477a0; "Veillonellaceae up-regulated in the lung of COPD patient compared to healthy human."; "Jie Zheng", "Yang Wang", "Yongqun He"; "PMID:23071781"; rdfs:label "expansion of Veillonellaceae in lung of COPD patient compared to healthy human" . _:4477a0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:4477b0; "Dialister up-regulated in the lung of COPD patient compared to healthy human."; "Jie Zheng", "Yang Wang", "Yongqun He"; "PMID:23071781"; rdfs:label "expansion of Dialister in lung of COPD patient compared to healthy human" . _:4477b0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:4477c0; "Veillonella up-regulated in the lung of COPD patient compared to healthy human."; "Jie Zheng", "Yang Wang", "Yongqun He"; "PMID:23071781"; rdfs:label "expansion of Veillonella in lung of COPD patient compared to healthy human" . _:4477c0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:4477d0; "Selenomonas up-regulated in the lung of COPD patient compared to healthy human."; "Jie Zheng", "Yang Wang", "Yongqun He"; "PMID:23071781"; rdfs:label "expansion of Selenomonas in lung of COPD patient compared to healthy human" . _:4477d0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:4477e0; "Centipeda up-regulated in the lung of COPD patient compared to healthy human."; "Jie Zheng", "Yang Wang", "Yongqun He"; "PMID:23071781"; rdfs:label "expansion of Centipeda in lung of COPD patient compared to healthy human" . _:4477e0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:4477f0; "Lachnospiraceae up-regulated in the lung of COPD patient compared to healthy human."; "Jie Zheng", "Yang Wang", "Yongqun He"; "PMID:23071781"; rdfs:label "expansion of Lachnospiraceae in lung of COPD patient compared to healthy human" . _:4477f0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:447800; "Catonella up-regulated in the lung of COPD patient compared to healthy human."; "Jie Zheng", "Yang Wang", "Yongqun He"; "PMID:23071781"; rdfs:label "expansion of Catonella in lung of COPD patient compared to healthy human" . _:447800 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:447810; "Oribacterium up-regulated in the lung of COPD patient compared to healthy human."; "Jie Zheng", "Yang Wang", "Yongqun He"; "PMID:23071781"; rdfs:label "expansion of Oribacterium in lung of COPD patient compared to healthy human" . _:447810 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:447820; "Butyrivibrio up-regulated in the lung of COPD patient compared to healthy human."; "Jie Zheng", "Yang Wang", "Yongqun He"; "PMID:23071781"; rdfs:label "expansion of Butyrivibrio in lung of COPD patient compared to healthy human" . _:447820 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:447830; "Eubacteriaceae up-regulated in the lung of COPD patient compared to healthy human."; "Jie Zheng", "Yang Wang", "Yongqun He"; "PMID:23071781"; rdfs:label "expansion of Eubacteriaceae in lung of COPD patient compared to healthy human" . _:447830 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:447840; "Eubacterium up-regulated in the lung of COPD patient compared to healthy human."; "Jie Zheng", "Yang Wang", "Yongqun He"; "PMID:23071781"; rdfs:label "expansion of Eubacterium in lung of COPD patient compared to healthy human" . _:447840 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:447850; "Anaerosporobacter up-regulated in the lung of COPD patient compared to healthy human."; "Jie Zheng", "Yang Wang", "Yongqun He"; "PMID:23071781"; rdfs:label "expansion of Anaerosporobacter in lung of COPD patient compared to healthy human" . _:447850 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:447860; "Peptostreptococcus up-regulated in the lung of COPD patient compared to healthy human."; "Jie Zheng", "Yang Wang", "Yongqun He"; "PMID:23071781"; rdfs:label "expansion of Peptostreptococcus in lung of COPD patient compared to healthy human" . _:447860 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:447870; "Parvimonas up-regulated in the lung of COPD patient compared to healthy human."; "Jie Zheng", "Yang Wang", "Yongqun He"; "PMID:23071781"; rdfs:label "expansion of Parvimonas in lung of COPD patient compared to healthy human" . _:447870 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:447880; "Leptotrichiaceae up-regulated in the lung of COPD patient compared to healthy human."; "Jie Zheng", "Yang Wang", "Yongqun He"; "PMID:23071781"; rdfs:label "expansion of Leptotrichiaceae in lung of COPD patient compared to healthy human" . _:447880 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:447890; "Leptotrichia up-regulated in the lung of COPD patient compared to healthy human."; "Jie Zheng", "Yang Wang", "Yongqun He"; "PMID:23071781"; rdfs:label "expansion of Leptotrichia in lung of COPD patient compared to healthy human" . _:447890 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:4478a0; "Fusobacteriaceae up-regulated in the lung of COPD patient compared to healthy human."; "Jie Zheng", "Yang Wang", "Yongqun He"; "PMID:23071781"; rdfs:label "expansion of Fusobacteriaceae in lung of COPD patient compared to healthy human" . _:4478a0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:4478b0; "Fusobacterium up-regulated in the lung of COPD patient compared to healthy human."; "Jie Zheng", "Yang Wang", "Yongqun He"; "PMID:23071781"; rdfs:label "expansion of Fusobacterium in lung of COPD patient compared to healthy human" . _:4478b0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:4478c0; "Balneimonas (Microvirga） up-regulated in the lung of COPD patient compared to healthy human."; "Jie Zheng", "Yang Wang", "Yongqun He"; "PMID:23071781"; rdfs:label "expansion of Balneimonas (Microvirga） in lung of COPD patient compared to healthy human" . _:4478c0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:4478d0; "Kingella up-regulated in the lung of COPD patient compared to healthy human."; "Jie Zheng", "Yang Wang", "Yongqun He"; "PMID:23071781"; rdfs:label "expansion of Kingella in lung of COPD patient compared to healthy human" . _:4478d0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:4478e0; "Aeromonadales up-regulated in the lung of COPD patient compared to healthy human."; "Jie Zheng", "Yang Wang", "Yongqun He"; "PMID:23071781"; rdfs:label "expansion of Aeromonadales in lung of COPD patient compared to healthy human" . _:4478e0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:4478f0; "Aeromonadaceae up-regulated in the lung of COPD patient compared to healthy human."; "Jie Zheng", "Yang Wang", "Yongqun He"; "PMID:23071781"; rdfs:label "expansion of Aeromonadaceae in lung of COPD patient compared to healthy human" . _:4478f0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:447900; "Aeromonas up-regulated in the lung of COPD patient compared to healthy human."; "Jie Zheng", "Yang Wang", "Yongqun He"; "PMID:23071781"; rdfs:label "expansion of Aeromonas in lung of COPD patient compared to healthy human" . _:447900 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:447910; "Serratia up-regulated in the lung of COPD patient compared to healthy human."; "Jie Zheng", "Yang Wang", "Yongqun He"; "PMID:23071781"; rdfs:label "expansion of Serratia in lung of COPD patient compared to healthy human" . _:447910 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:447920; "Desulfobacterales up-regulated in the lung of COPD patient compared to healthy human."; "Jie Zheng", "Yang Wang", "Yongqun He"; "PMID:23071781"; rdfs:label "expansion of Desulfobacterales in lung of COPD patient compared to healthy human" . _:447920 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:447930; "Desulfobulbaceae up-regulated in the lung of COPD patient compared to healthy human."; "Jie Zheng", "Yang Wang", "Yongqun He"; "PMID:23071781"; rdfs:label "expansion of Desulfobulbaceae in lung of COPD patient compared to healthy human" . _:447930 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:447940; "Desulfobulbus up-regulated in the lung of COPD patient compared to healthy human."; "Jie Zheng", "Yang Wang", "Yongqun He"; "PMID:23071781"; rdfs:label "expansion of Desulfobulbus in lung of COPD patient compared to healthy human" . _:447940 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:447950; "e-proteobacteria up-regulated in the lung of COPD patient compared to healthy human."; "Jie Zheng", "Yang Wang", "Yongqun He"; "PMID:23071781"; rdfs:label "expansion of e-proteobacteria in lung of COPD patient compared to healthy human" . _:447950 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:447960; "Campylobacteriales up-regulated in the lung of COPD patient compared to healthy human."; "Jie Zheng", "Yang Wang", "Yongqun He"; "PMID:23071781"; rdfs:label "expansion of Campylobacteriales in lung of COPD patient compared to healthy human" . _:447960 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:447970; "Campylobacteriaceae up-regulated in the lung of COPD patient compared to healthy human."; "Jie Zheng", "Yang Wang", "Yongqun He"; "PMID:23071781"; rdfs:label "expansion of Campylobacteriaceae in lung of COPD patient compared to healthy human" . _:447970 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:447980; "Campylobacter up-regulated in the lung of COPD patient compared to healthy human."; "Jie Zheng", "Yang Wang", "Yongqun He"; "PMID:23071781"; rdfs:label "expansion of Campylobacter in lung of COPD patient compared to healthy human" . _:447980 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:447990; "Dysgonomonas up-regulated in the lung of COPD patient compared to healthy human."; "Jie Zheng", "Yang Wang", "Yongqun He"; "PMID:23071781"; rdfs:label "expansion of Dysgonomonas in lung of COPD patient compared to healthy human" . _:447990 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:4479a0; "Tannerella up-regulated in the lung of COPD patient compared to healthy human."; "Jie Zheng", "Yang Wang", "Yongqun He"; "PMID:23071781"; rdfs:label "expansion of Tannerella in lung of COPD patient compared to healthy human" . _:4479a0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:4479b0; "Prevotella up-regulated in the lung of COPD patient compared to healthy human."; "Jie Zheng", "Yang Wang", "Yongqun He"; "PMID:23071781"; rdfs:label "expansion of Prevotella in lung of COPD patient compared to healthy human" . _:4479b0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:4479c0; "Hallella up-regulated in the lung of COPD patient compared to healthy human."; "Jie Zheng", "Yang Wang", "Yongqun He"; "PMID:23071781"; rdfs:label "expansion of Hallella in lung of COPD patient compared to healthy human" . _:4479c0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:4479d0; "Capnocytophaga up-regulated in the lung of COPD patient compared to healthy human." . _:4479d0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . "Jie Zheng", "Yang Wang", "Yongqun He"; "PMID:23071781"; rdfs:label "expansion of Capnocytophaga in lung of COPD patient compared to healthy human" . a owl:Class; rdfs:subClassOf , _:4479e0; "Haemophilus hemolyticus up-regulated in the lung of COPD patient compared to healthy human."; "Jie Zheng", "Yang Wang", "Yongqun He"; "PMID:16474030"; rdfs:label "expansion of Haemophilus hemolyticus in lung of COPD patient compared to healthy human" . _:4479e0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:4479f0; "Firmicutes up-regulated in the lung of COPD patient compared to healthy human."; "Jie Zheng", "Yang Wang", "Yongqun He"; "PMID:28408748"; rdfs:label "expansion of Firmicutes in lung of COPD patient compared to healthy human" . _:4479f0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:447a00; "Lactobacillus up-regulated in the lung of COPD patient compared to healthy human."; "Jie Zheng", "Yang Wang", "Yongqun He"; "PMID:28408748"; rdfs:label "expansion of Lactobacillus in lung of COPD patient compared to healthy human" . _:447a00 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:447a10; "Burkholderia up-regulated in the lung of COPD patient compared to healthy human."; "Jie Zheng", "Yang Wang", "Yongqun He"; "PMID:22427533"; rdfs:label "expansion of Burkholderia in lung of COPD patient compared to healthy human" . _:447a10 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:447a20; "Pseudomonas up-regulated in the lung of COPD patient compared to healthy human."; "Jie Zheng", "Yang Wang", "Yongqun He"; "PMID:27146202"; rdfs:label "expansion of Pseudomonas in lung of COPD patient compared to healthy human" . _:447a20 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:447a30; "Bacteroidetes down-regulated in the lung of COPD patient compared to healthy human."; "Jie Zheng", "Yang Wang", "Yongqun He"; "PMID:20052417"; rdfs:label "depletion of Bacteroidetes in lung of COPD patient compared to healthy human" . _:447a30 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:447a40; "Prevotella down-regulated in the lung of COPD patient compared to healthy human."; "Jie Zheng", "Yang Wang", "Yongqun He"; "PMID:20052417"; rdfs:label "depletion of Prevotella in lung of COPD patient compared to healthy human" . _:447a40 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:447a50; "Arthrobacter down-regulated in the lung of COPD patient compared to healthy human."; "Jie Zheng", "Yang Wang", "Yongqun He"; "PMID:23071781"; rdfs:label "depletion of Arthrobacter in lung of COPD patient compared to healthy human" . _:447a50 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:447a60; "Geodermatophilaceae down-regulated in the lung of COPD patient compared to healthy human."; "Jie Zheng", "Yang Wang", "Yongqun He"; "PMID:23071781"; rdfs:label "depletion of Geodermatophilaceae in lung of COPD patient compared to healthy human" . _:447a60 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:447a70; "Nakamurellaceae down-regulated in the lung of COPD patient compared to healthy human."; "Jie Zheng", "Yang Wang", "Yongqun He"; "PMID:23071781"; rdfs:label "depletion of Nakamurellaceae in lung of COPD patient compared to healthy human" . _:447a70 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:447a80; "Modestobacter down-regulated in the lung of COPD patient compared to healthy human."; "Jie Zheng", "Yang Wang", "Yongqun He"; "PMID:23071781"; rdfs:label "depletion of Modestobacter in lung of COPD patient compared to healthy human" . _:447a80 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:447a90; "Humicoccus down-regulated in the lung of COPD patient compared to healthy human."; "Jie Zheng", "Yang Wang", "Yongqun He"; "PMID:23071781"; rdfs:label "depletion of Humicoccus in lung of COPD patient compared to healthy human" . _:447a90 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:447aa0; "Thermoactinomycetaceae down-regulated in the lung of COPD patient compared to healthy human."; "Jie Zheng", "Yang Wang", "Yongqun He"; "PMID:23071781"; rdfs:label "depletion of Thermoactinomycetaceae in lung of COPD patient compared to healthy human" . _:447aa0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:447ab0; "Thermoactinomyces down-regulated in the lung of COPD patient compared to healthy human."; "Jie Zheng", "Yang Wang", "Yongqun He"; "PMID:23071781"; rdfs:label "depletion of Thermoactinomyces in lung of COPD patient compared to healthy human" . _:447ab0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:447ac0; "Clostridium down-regulated in the lung of COPD patient compared to healthy human."; "Jie Zheng", "Yang Wang", "Yongqun He"; "PMID:23071781"; rdfs:label "depletion of Clostridium in lung of COPD patient compared to healthy human" . _:447ac0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:447ad0; "Citrobacter down-regulated in the lung of COPD patient compared to healthy human."; "Jie Zheng", "Yang Wang", "Yongqun He"; "PMID:23071781"; rdfs:label "depletion of Citrobacter in lung of COPD patient compared to healthy human" . _:447ad0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:447ae0; "Prevotellaceae down-regulated in the lung of COPD patient compared to healthy human."; "Jie Zheng", "Yang Wang", "Yongqun He"; "PMID:29992131"; rdfs:label "depletion of Prevotellaceae in lung of COPD patient compared to healthy human" . _:447ae0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:447af0; "Acidaminococcaceae down-regulated in the lung of COPD patient compared to healthy human."; "Jie Zheng", "Yang Wang", "Yongqun He"; "PMID:29992131"; rdfs:label "depletion of Acidaminococcaceae in lung of COPD patient compared to healthy human" . _:447af0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:447b00; "Acinetobacter up-regulated in the lung of exacerbation COPD patient compared to stable COPD."; "Jie Zheng", "Yang Wang", "Yongqun He"; "PMID:24850358"; rdfs:label "expansion of Acinetobacter in lung of exacerbation COPD patient compared to stable COPD" . _:447b00 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:447b10; "Perlucidibaca up-regulated in the lung of exacerbation COPD patient compared to stable COPD."; "Jie Zheng", "Yang Wang", "Yongqun He"; "PMID:24850358"; rdfs:label "expansion of Perlucidibaca in lung of exacerbation COPD patient compared to stable COPD" . _:447b10 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:447b20; "Actinobacillus up-regulated in the lung of exacerbation COPD patient compared to stable COPD."; "Jie Zheng", "Yang Wang", "Yongqun He"; "PMID:24850358"; rdfs:label "expansion of Actinobacillus in lung of exacerbation COPD patient compared to stable COPD" . _:447b20 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:447b30; "Ehrlichia up-regulated in the lung of exacerbation COPD patient compared to stable COPD."; "Jie Zheng", "Yang Wang", "Yongqun He"; "PMID:24850358"; rdfs:label "expansion of Ehrlichia in lung of exacerbation COPD patient compared to stable COPD" . _:447b30 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:447b40; "Sphingomonas up-regulated in the lung of exacerbation COPD patient compared to stable COPD."; "Jie Zheng", "Yang Wang", "Yongqun He"; "PMID:24850358"; rdfs:label "expansion of Sphingomonas in lung of exacerbation COPD patient compared to stable COPD" . _:447b40 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:447b50; "Comamonas up-regulated in the lung of exacerbation COPD patient compared to stable COPD."; "Jie Zheng", "Yang Wang", "Yongqun He"; "PMID:24850358"; rdfs:label "expansion of Comamonas in lung of exacerbation COPD patient compared to stable COPD" . _:447b50 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:447b60; "Enterobacteriaceae up-regulated in the lung of exacerbation COPD patient compared to stable COPD."; "Jie Zheng", "Yang Wang", "Yongqun He"; "PMID:24850358"; rdfs:label "expansion of Enterobacteriaceae in lung of exacerbation COPD patient compared to stable COPD" . _:447b60 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:447b70; "Pseudomonas up-regulated in the lung of exacerbation COPD patient compared to stable COPD."; "Jie Zheng", "Yang Wang", "Yongqun He"; "PMID:24850358"; rdfs:label "expansion of Pseudomonas in lung of exacerbation COPD patient compared to stable COPD" . _:447b70 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:447b80; "Moraxella up-regulated in the lung of exacerbation COPD patient compared to stable COPD."; "Jie Zheng", "Yang Wang", "Yongqun He"; "PMID:26917613"; rdfs:label "expansion of Moraxella in lung of exacerbation COPD patient compared to stable COPD" . _:447b80 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:447b90; "Haemophilus influenzae up-regulated in the lung of exacerbation COPD patient compared to stable COPD."; "Jie Zheng", "Yang Wang", "Yongqun He"; "PMID:15805181"; rdfs:label "expansion of Haemophilus influenzae in lung of exacerbation COPD patient compared to stable COPD" . _:447b90 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:447ba0; "Actinobacteria down-regulated in the lung of exacerbation COPD patient compared to stable COPD."; "Jie Zheng", "Yang Wang", "Yongqun He"; "PMID:24850358", "PMID:28841671", "PMID:29269441"; rdfs:label "depletion of Actinobacteria in lung of exacerbation COPD patient compared to stable COPD" . _:447ba0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:447bb0; "Clostridia down-regulated in the lung of exacerbation COPD patient compared to stable COPD."; "Jie Zheng", "Yang Wang", "Yongqun He"; "PMID:24850358"; rdfs:label "depletion of Clostridia in lung of exacerbation COPD patient compared to stable COPD" . _:447bb0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:447bc0; "Bacilli down-regulated in the lung of exacerbation COPD patient compared to stable COPD."; "Jie Zheng", "Yang Wang", "Yongqun He"; "PMID:24850358"; rdfs:label "depletion of Bacilli in lung of exacerbation COPD patient compared to stable COPD" . _:447bc0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:447bd0; "Bacteroidia down-regulated in the lung of exacerbation COPD patient compared to stable COPD."; "Jie Zheng", "Yang Wang", "Yongqun He"; "PMID:24850358"; rdfs:label "depletion of Bacteroidia in lung of exacerbation COPD patient compared to stable COPD" . _:447bd0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:447be0; "Epsilonproteobacteria down-regulated in the lung of exacerbation COPD patient compared to stable COPD."; "Jie Zheng", "Yang Wang", "Yongqun He"; "PMID:24850358"; rdfs:label "depletion of Epsilonproteobacteria in lung of exacerbation COPD patient compared to stable COPD" . _:447be0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:447bf0; "Moraxella down-regulated in the lung of exacerbation COPD patient compared to stable COPD."; "Jie Zheng", "Yang Wang", "Yongqun He"; "PMID:24850358", "PMID:31234826"; rdfs:label "depletion of Moraxella in lung of exacerbation COPD patient compared to stable COPD" . _:447bf0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:447c00; "Campylobacter down-regulated in the lung of exacerbation COPD patient compared to stable COPD."; "Jie Zheng", "Yang Wang", "Yongqun He"; "PMID:24850358"; rdfs:label "depletion of Campylobacter in lung of exacerbation COPD patient compared to stable COPD" . _:447c00 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:447c10; "Spirochaetota down-regulated in the lung of exacerbation COPD patient compared to stable COPD."; "Jie Zheng", "Yang Wang", "Yongqun He"; "PMID:29386298"; rdfs:label "depletion of Spirochaetota in lung of exacerbation COPD patient compared to stable COPD" . _:447c10 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:447c20; "Cardiobacteria down-regulated in the lung of exacerbation COPD patient compared to stable COPD."; "Jie Zheng", "Yang Wang", "Yongqun He"; "PMID:31234826"; rdfs:label "depletion of Cardiobacteria in lung of exacerbation COPD patient compared to stable COPD" . _:447c20 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:447c30; "Dialister down-regulated in the lung of exacerbation COPD patient compared to stable COPD."; "Jie Zheng", "Yang Wang", "Yongqun He"; "PMID:31234826"; rdfs:label "depletion of Dialister in lung of exacerbation COPD patient compared to stable COPD" . _:447c30 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:447c40; "Slackia down-regulated in the lung of exacerbation COPD patient compared to stable COPD."; "Jie Zheng", "Yang Wang", "Yongqun He"; "PMID:31234826"; rdfs:label "depletion of Slackia in lung of exacerbation COPD patient compared to stable COPD" . _:447c40 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:447c50; "Mogibacterium down-regulated in the lung of exacerbation COPD patient compared to stable COPD."; "Jie Zheng", "Yang Wang", "Yongqun He"; "PMID:31234826"; rdfs:label "depletion of Mogibacterium in lung of exacerbation COPD patient compared to stable COPD" . _:447c50 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:447c60; "Treponema down-regulated in the lung of exacerbation COPD patient compared to stable COPD."; "Jie Zheng", "Yang Wang", "Yongqun He"; "PMID:31234826"; rdfs:label "depletion of Treponema in lung of exacerbation COPD patient compared to stable COPD" . _:447c60 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:447c70; "Aggregatibacter down-regulated in the lung of exacerbation COPD patient compared to stable COPD."; "Jie Zheng", "Yang Wang", "Yongqun He"; "PMID:31234826"; rdfs:label "depletion of Aggregatibacter in lung of exacerbation COPD patient compared to stable COPD" . _:447c70 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:447c80; "Bulleidia down-regulated in the lung of exacerbation COPD patient compared to stable COPD."; "Jie Zheng", "Yang Wang", "Yongqun He"; "PMID:31234826"; rdfs:label "depletion of Bulleidia in lung of exacerbation COPD patient compared to stable COPD" . _:447c80 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:447c90; "Megasphaera down-regulated in the lung of exacerbation COPD patient compared to stable COPD."; "Jie Zheng", "Yang Wang", "Yongqun He"; "PMID:31234826"; rdfs:label "depletion of Megasphaera in lung of exacerbation COPD patient compared to stable COPD" . _:447c90 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:447ca0; "Prevotella down-regulated in the lung of exacerbation COPD patient compared to stable COPD."; "Jie Zheng", "Yang Wang", "Yongqun He"; "PMID:31234826"; rdfs:label "depletion of Prevotella in lung of exacerbation COPD patient compared to stable COPD" . _:447ca0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:447cb0; "Veillonella down-regulated in the lung of exacerbation COPD patient compared to stable COPD."; "Jie Zheng", "Yang Wang", "Yongqun He"; "PMID:31234826"; rdfs:label "depletion of Veillonella in lung of exacerbation COPD patient compared to stable COPD" . _:447cb0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:447cc0; "Firmicutes down-regulated in the lung of exacerbation COPD patient compared to stable COPD."; "Jie Zheng", "Yang Wang", "Yongqun He"; "PMID:31234826"; rdfs:label "depletion of Firmicutes in lung of exacerbation COPD patient compared to stable COPD" . _:447cc0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:447cd0; "Prevotella up-regulated in the lung of severe COPD patient compared to mild-moderate COPD."; "Jie Zheng", "Yang Wang", "Yongqun He"; "PMID:27428540"; rdfs:label "expansion of Prevotella in lung of severe COPD patient compared to mild-moderate COPD" . _:447cd0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:447ce0; "Acinetobacter up-regulated in the lung of severe COPD patient compared to mild-moderate COPD."; "Jie Zheng", "Yang Wang", "Yongqun He"; "PMID:27428540"; rdfs:label "expansion of Acinetobacter in lung of severe COPD patient compared to mild-moderate COPD" . _:447ce0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:447cf0; "Haemophilus up-regulated in the lung of severe COPD patient compared to mild-moderate COPD."; "Jie Zheng", "Yang Wang", "Yongqun He"; "PMID:29386298"; rdfs:label "expansion of Haemophilus in lung of severe COPD patient compared to mild-moderate COPD" . _:447cf0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:447d00; "Proteobacteria up-regulated in the lung of severe COPD patient compared to mild-moderate COPD."; "Jie Zheng", "Yang Wang", "Yongqun He"; "PMID:29386298"; rdfs:label "expansion of Proteobacteria in lung of severe COPD patient compared to mild-moderate COPD" . _:447d00 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:447d10; "Nocardioides up-regulated in the lung of severe COPD patient compared to mild-moderate COPD."; "Jie Zheng", "Yang Wang", "Yongqun He"; "PMID:23071781"; rdfs:label "expansion of Nocardioides in lung of severe COPD patient compared to mild-moderate COPD" . _:447d10 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:447d20; "Pontibacillus up-regulated in the lung of severe COPD patient compared to mild-moderate COPD."; "Jie Zheng", "Yang Wang", "Yongqun He"; "PMID:23071781"; rdfs:label "expansion of Pontibacillus in lung of severe COPD patient compared to mild-moderate COPD" . _:447d20 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:447d30; "Clostridium up-regulated in the lung of severe COPD patient compared to mild-moderate COPD."; "Jie Zheng", "Yang Wang", "Yongqun He"; "PMID:23071781"; rdfs:label "expansion of Clostridium in lung of severe COPD patient compared to mild-moderate COPD" . _:447d30 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:447d40; "Balneimonas up-regulated in the lung of severe COPD patient compared to mild-moderate COPD."; "Jie Zheng", "Yang Wang", "Yongqun He"; "PMID:23071781"; rdfs:label "expansion of Balneimonas in lung of severe COPD patient compared to mild-moderate COPD" . _:447d40 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:447d50; "Aeromonas up-regulated in the lung of severe COPD patient compared to mild-moderate COPD."; "Jie Zheng", "Yang Wang", "Yongqun He"; "PMID:23071781"; rdfs:label "expansion of Aeromonas in lung of severe COPD patient compared to mild-moderate COPD" . _:447d50 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:447d60; "Desulfobulbaceae up-regulated in the lung of severe COPD patient compared to mild-moderate COPD."; "Jie Zheng", "Yang Wang", "Yongqun He"; "PMID:23071781"; rdfs:label "expansion of Desulfobulbaceae in lung of severe COPD patient compared to mild-moderate COPD" . _:447d60 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:447d70; "Desulfobacterales up-regulated in the lung of severe COPD patient compared to mild-moderate COPD."; "Jie Zheng", "Yang Wang", "Yongqun He"; "PMID:23071781"; rdfs:label "expansion of Desulfobacterales in lung of severe COPD patient compared to mild-moderate COPD" . _:447d70 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:447d80; "Aeromonadales up-regulated in the lung of severe COPD patient compared to mild-moderate COPD."; "Jie Zheng", "Yang Wang", "Yongqun He"; "PMID:23071781"; rdfs:label "expansion of Aeromonadales in lung of severe COPD patient compared to mild-moderate COPD" . _:447d80 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:447d90; "Aeromonadaceae up-regulated in the lung of severe COPD patient compared to mild-moderate COPD."; "Jie Zheng", "Yang Wang", "Yongqun He"; "PMID:23071781"; rdfs:label "expansion of Aeromonadaceae in lung of severe COPD patient compared to mild-moderate COPD" . _:447d90 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:447da0; "Prevotella down-regulated in the lung of severe COPD patient compared to mild-moderate COPD."; "Jie Zheng", "Yang Wang", "Yongqun He"; "PMID:29386298"; rdfs:label "depletion of Prevotella in lung of severe COPD patient compared to mild-moderate COPD" . _:447da0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:447db0; "Veillonella down-regulated in the lung of severe COPD patient compared to mild-moderate COPD."; "Jie Zheng", "Yang Wang", "Yongqun He"; "PMID:29386298"; rdfs:label "depletion of Veillonella in lung of severe COPD patient compared to mild-moderate COPD" . _:447db0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:447dc0; "Bacteroidetes down-regulated in the lung of severe COPD patient compared to mild-moderate COPD."; "Jie Zheng", "Yang Wang", "Yongqun He"; "PMID:29386298"; rdfs:label "depletion of Bacteroidetes in lung of severe COPD patient compared to mild-moderate COPD" . _:447dc0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:447dd0; "Moraxellaceae down-regulated in the lung of severe COPD patient compared to mild-moderate COPD."; "Jie Zheng", "Yang Wang", "Yongqun He"; "PMID:25253795"; rdfs:label "depletion of Moraxellaceae in lung of severe COPD patient compared to mild-moderate COPD" . _:447dd0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:447de0; "Oribacterium down-regulated in the lung of severe COPD patient compared to mild-moderate COPD."; "Jie Zheng", "Yang Wang", "Yongqun He"; "PMID:25253795"; rdfs:label "depletion of Oribacterium in lung of severe COPD patient compared to mild-moderate COPD" . _:447de0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:447df0; "Eikenella down-regulated in the lung of severe COPD patient compared to mild-moderate COPD."; "Jie Zheng", "Yang Wang", "Yongqun He"; "PMID:25253795"; rdfs:label "depletion of Eikenella in lung of severe COPD patient compared to mild-moderate COPD" . _:447df0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:447e00; "Moraxella down-regulated in the lung of severe COPD patient compared to mild-moderate COPD."; "Jie Zheng", "Yang Wang", "Yongqun He"; "PMID:25253795"; rdfs:label "depletion of Moraxella in lung of severe COPD patient compared to mild-moderate COPD" . _:447e00 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:447e10; "Actinobacillus down-regulated in the lung of severe COPD patient compared to mild-moderate COPD."; "Jie Zheng", "Yang Wang", "Yongqun He"; "PMID:25253795"; rdfs:label "depletion of Actinobacillus in lung of severe COPD patient compared to mild-moderate COPD" . _:447e10 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:447e20; "Firmicutes down-regulated in the lung of severe COPD patient compared to mild-moderate COPD."; "Jie Zheng", "Yang Wang", "Yongqun He"; "PMID:25253795"; rdfs:label "depletion of Firmicutes in lung of severe COPD patient compared to mild-moderate COPD" . _:447e20 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:447e30; "Proteobacteria down-regulated in the lung of severe COPD patient compared to mild-moderate COPD."; "Jie Zheng", "Yang Wang", "Yongqun He"; "PMID:25253795"; rdfs:label "depletion of Proteobacteria in lung of severe COPD patient compared to mild-moderate COPD" . _:447e30 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:447e40; "Haemophilus parahaemolyticus down-regulated in the lung of severe COPD patient compared to mild-moderate COPD."; "Jie Zheng", "Yang Wang", "Yongqun He"; "PMID:25253795"; rdfs:label "depletion of Haemophilus parahaemolyticus in lung of severe COPD patient compared to mild-moderate COPD" . _:447e40 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf ; "GOLD Stage 2 (or Grade 2) represents Moderate COPD, defined by a post-bronchodilator (Forced Expiratory Volume in 1 second) between 50% and 79% of the predicted value, indicating a moderate limitation in airflow. Patients often experience worsening shortness of breath, increased coughing, and mucus production, making it a common point for seeking medical advice."; "Rena Wang, Oliver He"; "https://www.ncbi.nlm.nih.gov/books/NBK580644/table/ch1.tab1/", "https://www.webmd.com/lung/copd/gold-criteria-for-copd"; rdfs:label "GOLD Stage 2"@en . a owl:Class; rdfs:subClassOf ; "GOLD Stage 3 (Severe) COPD indicates a significant limitation in lung function, with between 30% and 49% of the predicted value. Patients typically experience worsening shortness of breath, frequent exacerbations (flare-ups), and reduced exercise tolerance, requiring targeted treatment such as pulmonary rehabilitation and inhaled medications."; "Rena Wang, Oliver He"; "https://www.ncbi.nlm.nih.gov/books/NBK580644/table/ch1.tab1/", "https://www.webmd.com/lung/copd/gold-criteria-for-copd"; rdfs:label "GOLD Stage 3"@en . a owl:Class; rdfs:subClassOf , _:447e50; "Proteobacteria up-regulated in the gut of COPD patient compared to healthy human."; "Jie Zheng", "Yang Wang", "Yongqun He"; "PMID:37240974"; rdfs:label "expansion of Proteobacteria in gut of COPD patient compared to healthy human" . _:447e50 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:447e60; "Actinobacteria up-regulated in the gut of COPD patient compared to healthy human."; "Jie Zheng", "Yang Wang", "Yongqun He"; "PMID:37240974"; rdfs:label "expansion of Actinobacteria in gut of COPD patient compared to healthy human" . _:447e60 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:447e70; "Haemophilus up-regulated in the gut of COPD patient compared to healthy human."; "Jie Zheng", "Yang Wang", "Yongqun He"; "PMID:35983167", "PMID:37029178", "PMID:37240974", "PMID:38778224"; rdfs:label "expansion of Haemophilus in gut of COPD patient compared to healthy human" . _:447e70 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:447e80; "Moraxella up-regulated in the gut of COPD patient compared to healthy human."; "Jie Zheng", "Yang Wang", "Yongqun He"; "PMID:35983167", "PMID:36883945", "PMID:37029178", "PMID:37240974", "PMID:38778224"; rdfs:label "expansion of Moraxella in gut of COPD patient compared to healthy human" . _:447e80 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:447e90; "Pseudomonas up-regulated in the gut of COPD patient compared to healthy human."; "Jie Zheng", "Yang Wang", "Yongqun He"; "PMID:35983167", "PMID:37029178", "PMID:37240974"; rdfs:label "expansion of Pseudomonas in gut of COPD patient compared to healthy human" . _:447e90 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:447ea0; "Enterobacteriaceae up-regulated in the gut of COPD patient compared to healthy human."; "Jie Zheng", "Yang Wang", "Yongqun He"; "PMID:37240974"; rdfs:label "expansion of Enterobacteriaceae in gut of COPD patient compared to healthy human" . _:447ea0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:447eb0; "Streptococcus up-regulated in the gut of COPD patient compared to healthy human."; "Jie Zheng", "Yang Wang", "Yongqun He"; "PMID:33208745", "PMID:35983167", "PMID:36883945", "PMID:37240974", "PMID:38778224"; rdfs:label "expansion of Streptococcus in gut of COPD patient compared to healthy human" . _:447eb0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:447ec0; "Desulfovibrionaceae up-regulated in the gut of COPD patient compared to healthy human."; "Jie Zheng", "Yang Wang", "Yongqun He"; "PMID:38331563"; rdfs:label "expansion of Desulfovibrionaceae in gut of COPD patient compared to healthy human" . _:447ec0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:447ed0; "Fusobacteriaceae up-regulated in the gut of COPD patient compared to healthy human."; "Jie Zheng", "Yang Wang", "Yongqun He"; "PMID:36883945"; rdfs:label "expansion of Fusobacteriaceae in gut of COPD patient compared to healthy human" . _:447ed0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:447ee0 . _:447ee0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . "Prevotellaceae up-regulated in the gut of COPD patient compared to healthy human."; "Jie Zheng", "Yang Wang", "Yongqun He"; "PMID:36883945"; rdfs:label "expansion of Prevotellaceae in gut of COPD patient compared to healthy human" . a owl:Class; rdfs:subClassOf , _:447ef0; "Bacteroidaceae up-regulated in the gut of COPD patient compared to healthy human."; "Jie Zheng", "Yang Wang", "Yongqun He"; "PMID:36883945"; rdfs:label "expansion of Bacteroidaceae in gut of COPD patient compared to healthy human" . _:447ef0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:447f00; "Rothia up-regulated in the gut of COPD patient compared to healthy human."; "Jie Zheng", "Yang Wang", "Yongqun He"; "PMID:33208745"; rdfs:label "expansion of Rothia in gut of COPD patient compared to healthy human" . _:447f00 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:447f10; "Klebsiella up-regulated in the gut of COPD patient compared to healthy human."; "Jie Zheng", "Yang Wang", "Yongqun He"; "PMID:37029178"; rdfs:label "expansion of Klebsiella in gut of COPD patient compared to healthy human" . _:447f10 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:447f20; "Bacteroidetes down-regulated in the gut of COPD patient compared to healthy human."; "Jie Zheng", "Yang Wang", "Yongqun He"; "PMID:33687943", "PMID:36883945", "PMID:37240974"; rdfs:label "depletion of Bacteroidetes in gut of COPD patient compared to healthy human" . _:447f20 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:447f30; "Firmicutes down-regulated in the gut of COPD patient compared to healthy human."; "Jie Zheng", "Yang Wang", "Yongqun He"; "PMID:33687943", "PMID:36883945", "PMID:37240974"; rdfs:label "depletion of Firmicutes in gut of COPD patient compared to healthy human" . _:447f30 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:447f40; "Prevotella down-regulated in the gut of COPD patient compared to healthy human."; "Jie Zheng", "Yang Wang", "Yongqun He"; "PMID:36883945", "PMID:37029178", "PMID:37240974", "PMID:38778224"; rdfs:label "depletion of Prevotella in gut of COPD patient compared to healthy human" . _:447f40 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:447f50; "Veillonella down-regulated in the gut of COPD patient compared to healthy human."; "Jie Zheng", "Yang Wang", "Yongqun He"; "PMID:37029178", "PMID:37240974"; rdfs:label "depletion of Veillonella in gut of COPD patient compared to healthy human" . _:447f50 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:447f60; "Bifidobacterium down-regulated in the gut of COPD patient compared to healthy human."; "Jie Zheng", "Yang Wang", "Yongqun He"; "PMID:35983167", "PMID:37240974", "PMID:38778224"; rdfs:label "depletion of Bifidobacterium in gut of COPD patient compared to healthy human" . _:447f60 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:447f70; "Faecalibacterium down-regulated in the gut of COPD patient compared to healthy human."; "Jie Zheng", "Yang Wang", "Yongqun He"; "PMID:37240974"; rdfs:label "depletion of Faecalibacterium in gut of COPD patient compared to healthy human" . _:447f70 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:447f80; "Parabacteroides goldsteinii down-regulated in the gut of COPD patient compared to healthy human."; "Jie Zheng", "Yang Wang", "Yongqun He"; "PMID:33687943"; rdfs:label "depletion of Parabacteroides goldsteinii in gut of COPD patient compared to healthy human" . _:447f80 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:447f90; "Lachnospiraceae down-regulated in the gut of COPD patient compared to healthy human."; "Jie Zheng", "Yang Wang", "Yongqun He"; "PMID:33208745", "PMID:36883945", "PMID:38331563", "​​PMID:35983167"; rdfs:label "depletion of Lachnospiraceae in gut of COPD patient compared to healthy human" . _:447f90 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:447fa0; "Clostridium down-regulated in the gut of COPD patient compared to healthy human."; "Jie Zheng", "Yang Wang", "Yongqun He"; "PMID:38778224"; rdfs:label "depletion of Clostridium in gut of COPD patient compared to healthy human" . _:447fa0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:447fb0; "Propionibacterium down-regulated in the gut of COPD patient compared to healthy human."; "Jie Zheng", "Yang Wang", "Yongqun He"; "PMID:38778224"; rdfs:label "depletion of Propionibacterium in gut of COPD patient compared to healthy human" . _:447fb0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:447fc0; "Lactobacillus down-regulated in the gut of COPD patient compared to healthy human."; "Jie Zheng", "Yang Wang", "Yongqun He"; "PMID:37029178"; rdfs:label "depletion of Lactobacillus in gut of COPD patient compared to healthy human" . _:447fc0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:447fd0; "Gemella down-regulated in the gut of COPD patient compared to healthy human."; "Jie Zheng", "Yang Wang", "Yongqun He"; "PMID:37029178"; rdfs:label "depletion of Gemella in gut of COPD patient compared to healthy human" . _:447fd0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:447fe0; "Neisseria down-regulated in the gut of COPD patient compared to healthy human."; "Jie Zheng", "Yang Wang", "Yongqun He"; "PMID:37029178"; rdfs:label "depletion of Neisseria in gut of COPD patient compared to healthy human" . _:447fe0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf ; "GOLD Stage 4 represents very severe, end-stage COPD, characterized by lung function (FEV1) less than 30% of predicted capacity. It involves chronic, debilitating breathing difficulties, frequent flare-ups, and often requires long-term oxygen therapy. Management focuses on improving quality of life, using medications, pulmonary rehab, and potentially lung-volume reduction surgery."; "Rena Wang, Oliver He"; "https://www.ncbi.nlm.nih.gov/books/NBK580644/table/ch1.tab1/", "https://www.webmd.com/lung/copd/gold-criteria-for-copd"; rdfs:label "GOLD Stage 4"@en . a owl:Class; rdfs:subClassOf ; rdfs:label "patient"@en . a owl:Class; rdfs:subClassOf ; "A process quality in which a disease is in its stable stage."; "Rena Wang, Oliver He"; rdfs:label "disease stable"@en . a owl:Class; rdfs:subClassOf ; "A process quality in which a disease is in its stage of execerbation."; "Rena Wang, Oliver He"; rdfs:label "disease exacerbation"@en . a owl:Class; rdfs:subClassOf ; "A process quality in which the CODP disease is in its stable stage."; "Rena Wang, Oliver He"; rdfs:label "COPD stable"@en . a owl:Class; rdfs:subClassOf ; "A process quality in which the CODP disease is in its stage of execerbation."; "Rena Wang, Oliver He"; rdfs:label "COPD execerbation"@en . a owl:Class; rdfs:subClassOf ; "A COPD human oral microbiome interaction that shows bacterial change in sputum of severe COPD patient compared to mild-moderate COPD"; rdfs:label "bacterial change in sputum of severe COPD patient compared to mild-moderate COPD"@en . a owl:Class; owl:equivalentClass _:447ff0; rdfs:subClassOf ; rdfs:label "SCFA-producing bacteria"@en . _:447ff0 a owl:Class; owl:intersectionOf _:448000 . _:448000 rdf:first ; rdf:rest _:448020 . _:448020 rdf:first _:448010; rdf:rest rdf:nil . _:448010 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf ; "Human gut microbiome interaction where a person has Major Depressive Disorder (MDD)."; "Haihe Wang", "Jie Zheng", "Yongqun He"; rdfs:label "MDD human gut microbiome interaction" . a owl:Class; rdfs:subClassOf ; "MDD human gut microbiome interaction that shows an change of bacteria in patients with MDD compared to healthy controls."; "Haihe Wang", "Jie Zheng", "Yongqun He"; rdfs:label "bacterial change in gut of MDD patient compared to healthy human" . a owl:Class; rdfs:subClassOf ; "MDD human gut microbiome interaction that shows an change of bacteria in patients with active-phase MDD compared to those with remission-phase MDD."; "Haihe Wang", "Jie Zheng", "Yongqun He"; rdfs:label "bacterial change in gut of active-phase MDD patient compared to remission-phase MDD patient" . a owl:Class; rdfs:subClassOf ; "MDD human gut microbiome interaction that shows an change of bacteria in patients with active-phase MDD compared to healthy controls."; "Haihe Wang", "Jie Zheng", "Yongqun He"; rdfs:label "bacterial change in gut of active-phase MDD patient compared to healthy human" . a owl:Class; rdfs:subClassOf ; "MDD human gut microbiome interaction that shows an change of bacteria in female patients with MDD compared to healthy controls."; "Haihe Wang", "Jie Zheng", "Yongqun He"; rdfs:label "bacterial change in gut of female MDD patient compared to healthy human" . a owl:Class; rdfs:subClassOf ; "MDD human gut microbiome interaction that shows an change of bacteria in adolescent patients with MDD compared to healthy controls."; "Haihe Wang", "Jie Zheng", "Yongqun He"; rdfs:label "bacterial change in gut of adolescent MDD patient compared to healthy human" . a owl:Class; rdfs:subClassOf , _:448030; "Acinetobacter sp. up-regulated in gut of MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:41173853"; rdfs:label "expansion of Acinetobacter sp. in gut of MDD patient compared to healthy human" . _:448030 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:448040; "Bacteroides fragilis up-regulated in gut of MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:33268363"; rdfs:label "expansion of Bacteroides fragilis in gut of MDD patient compared to healthy human" . _:448040 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:448050; "Bacteroides thetaiotaomicron up-regulated in gut of MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:33268363", "PMID:34093266"; rdfs:label "expansion of Bacteroides thetaiotaomicron in gut of MDD patient compared to healthy human" . _:448050 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:448060; "Phocaeicola vulgatus up-regulated in gut of MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:33268363"; rdfs:label "expansion of Phocaeicola vulgatus in gut of MDD patient compared to healthy human" . _:448060 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:448070; "Nitrobacter hamburgensis up-regulated in gut of MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:41173853"; rdfs:label "expansion of Nitrobacter hamburgensis in gut of MDD patient compared to healthy human" . _:448070 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:448080; "Trueperella pyogenes up-regulated in gut of MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:39719433"; rdfs:label "expansion of Trueperella pyogenes in gut of MDD patient compared to healthy human" . _:448080 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:448090; "Bacteroides eggerthii up-regulated in gut of MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:33268363"; rdfs:label "expansion of Bacteroides eggerthii in gut of MDD patient compared to healthy human" . _:448090 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:4480a0; "Bacteroides ovatus up-regulated in gut of MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:33268363"; rdfs:label "expansion of Bacteroides ovatus in gut of MDD patient compared to healthy human" . _:4480a0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:4480b0; "Phascolarctobacterium faecium up-regulated in gut of MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:39719433"; rdfs:label "expansion of Phascolarctobacterium faecium in gut of MDD patient compared to healthy human" . _:4480b0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:4480c0; "Bilophila wadsworthia up-regulated in gut of MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:39719433"; rdfs:label "expansion of Bilophila wadsworthia in gut of MDD patient compared to healthy human" . _:4480c0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:4480d0; "Bifidobacterium sp. up-regulated in gut of MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:39217732"; rdfs:label "expansion of Bifidobacterium sp. in gut of MDD patient compared to healthy human" . _:4480d0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:4480e0; "Vibrio scophthalmi up-regulated in gut of MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:41173853"; rdfs:label "expansion of Vibrio scophthalmi in gut of MDD patient compared to healthy human" . _:4480e0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:4480f0; "Bacteroides stercoris up-regulated in gut of MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:33268363"; rdfs:label "expansion of Bacteroides stercoris in gut of MDD patient compared to healthy human" . _:4480f0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:448100; "Rhodococcus pyridinivorans up-regulated in gut of MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:41173853"; rdfs:label "expansion of Rhodococcus pyridinivorans in gut of MDD patient compared to healthy human" . _:448100 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:448110; "Phocaeicola massiliensis up-regulated in gut of MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:33268363"; rdfs:label "expansion of Phocaeicola massiliensis in gut of MDD patient compared to healthy human" . _:448110 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:448120; "Phocaeicola dorei up-regulated in gut of MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:33268363"; rdfs:label "expansion of Phocaeicola dorei in gut of MDD patient compared to healthy human" . _:448120 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:448130; "Enterocloster aldensis up-regulated in gut of MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:39719433"; rdfs:label "expansion of Enterocloster aldensis in gut of MDD patient compared to healthy human" . _:448130 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:448140; "Leptospira kmetyi up-regulated in gut of MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:41173853"; rdfs:label "expansion of Leptospira kmetyi in gut of MDD patient compared to healthy human" . _:448140 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:448150; "Flavonifractor plautii ATCC29863 up-regulated in gut of MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:39719433"; rdfs:label "expansion of Flavonifractor plautii ATCC29863 in gut of MDD patient compared to healthy human" . _:448150 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:448160; "Dysosmobacter welbionis up-regulated in gut of MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:39719433"; rdfs:label "expansion of Dysosmobacter welbionis in gut of MDD patient compared to healthy human" . _:448160 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:448170; "Bifidobacterium longum up-regulated in gut of MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:31685046"; rdfs:label "expansion of Bifidobacterium longum in gut of MDD patient compared to healthy human" . _:448170 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:448180; "Prevotella intermedia 17 up-regulated in gut of MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:30927646"; rdfs:label "expansion of Prevotella intermedia 17 in gut of MDD patient compared to healthy human" . _:448180 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:448190; "Akkermansia muciniphila ATCC BAA-835 up-regulated in gut of MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:30927646"; rdfs:label "expansion of Akkermansia muciniphila ATCC BAA-835 in gut of MDD patient compared to healthy human" . _:448190 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:4481a0; "Bifidobacterium adolescentis ATCC 15703 up-regulated in gut of MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:30927646"; rdfs:label "expansion of Bifidobacterium adolescentis ATCC 15703 in gut of MDD patient compared to healthy human" . _:4481a0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:4481b0; "Eubacterium rectale ATCC 33656 up-regulated in gut of MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:30927646"; rdfs:label "expansion of Eubacterium rectale ATCC 33656 in gut of MDD patient compared to healthy human" . _:4481b0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:4481c0; "Prevotella melaninogenica ATCC25845 up-regulated in gut of MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:30927646"; rdfs:label "expansion of Prevotella melaninogenica ATCC25845 in gut of MDD patient compared to healthy human" . _:4481c0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:4481d0; "Clostridium saccharolyticum wm1 up-regulated in gut of MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:30927646"; rdfs:label "expansion of Clostridium saccharolyticum wm1 in gut of MDD patient compared to healthy human" . _:4481d0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:4481e0; "Oscillibacter valericigenes sjm18-20 up-regulated in gut of MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:30927646"; rdfs:label "expansion of Oscillibacter valericigenes sjm18-20 in gut of MDD patient compared to healthy human" . _:4481e0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:4481f0; "Prevotella denticola F0289 up-regulated in gut of MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:30927646"; rdfs:label "expansion of Prevotella denticola F0289 in gut of MDD patient compared to healthy human" . _:4481f0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:448200; "Megasphaera elsdenii DSM20460 up-regulated in gut of MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:30927646"; rdfs:label "expansion of Megasphaera elsdenii DSM20460 in gut of MDD patient compared to healthy human" . _:448200 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:448210; "Escherichia coli up-regulated in gut of MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:30927646", "PMID:39719433"; rdfs:label "expansion of Escherichia coli in gut of MDD patient compared to healthy human" . _:448210 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:448220; "Bacteroides uniformis up-regulated in gut of MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:34093266"; rdfs:label "expansion of Bacteroides uniformis in gut of MDD patient compared to healthy human" . _:448220 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:448230; "Selenomonas ruminantium up-regulated in gut of MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:30927646"; rdfs:label "expansion of Selenomonas ruminantium in gut of MDD patient compared to healthy human" . _:448230 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:448240; "Bifidobacterium breve up-regulated in gut of MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:31685046"; rdfs:label "expansion of Bifidobacterium breve in gut of MDD patient compared to healthy human" . _:448240 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:448250; "Bifidobacterium dentium up-regulated in gut of MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:31685046"; rdfs:label "expansion of Bifidobacterium dentium in gut of MDD patient compared to healthy human" . _:448250 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:448260; "Ruminococcus torques up-regulated in gut of MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:40717539"; rdfs:label "expansion of Ruminococcus torques in gut of MDD patient compared to healthy human" . _:448260 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:448270; "Pseudoflavonifractor capillosus up-regulated in gut of MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:32867257"; rdfs:label "expansion of Pseudoflavonifractor capillosus in gut of MDD patient compared to healthy human" . _:448270 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:448280; "Enterocloster citroniae up-regulated in gut of MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:32867257"; rdfs:label "expansion of Enterocloster citroniae  in gut of MDD patient compared to healthy human" . _:448280 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:448290; "Flintibacter butyricus up-regulated in gut of MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:32867257"; rdfs:label "expansion of Flintibacter butyricus in gut of MDD patient compared to healthy human" . _:448290 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:4482a0; "Eisenbergiella massiliensis up-regulated in gut of MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:32867257"; rdfs:label "expansion of Eisenbergiella massiliensis in gut of MDD patient compared to healthy human" . _:4482a0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:4482b0; "Fenollaria timonensis up-regulated in gut of MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:32867257"; rdfs:label "expansion of Fenollaria timonensis in gut of MDD patient compared to healthy human" . _:4482b0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:4482c0; "Christensenella timonensis up-regulated in gut of MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:32867257"; rdfs:label "expansion of Christensenella timonensis in gut of MDD patient compared to healthy human" . _:4482c0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:4482d0; "Escherichia up-regulated in gut of MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:30927646", "PMID:34093266", "PMID:39013880"; rdfs:label "expansion of Escherichia in gut of MDD patient compared to healthy human" . _:4482d0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:4482e0; "Klebsiella up-regulated in gut of MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:30927646"; rdfs:label "expansion of Klebsiella in gut of MDD patient compared to healthy human" . _:4482e0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:4482f0; "Fusobacterium up-regulated in gut of MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:40494496"; rdfs:label "expansion of Fusobacterium in gut of MDD patient compared to healthy human" . _:4482f0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:448300; "Gammaproteobacteria up-regulated in gut of MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:39013880"; rdfs:label "expansion of Gammaproteobacteria in gut of MDD patient compared to healthy human" . _:448300 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:448310; "Ruminococcus up-regulated in gut of MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:40552978"; rdfs:label "expansion of Ruminococcus in gut of MDD patient compared to healthy human" . _:448310 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:448320; "Deinococcus up-regulated in gut of MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:35153660"; rdfs:label "expansion of Deinococcus in gut of MDD patient compared to healthy human" . _:448320 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:448330; "Enterococcus up-regulated in gut of MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:37863362"; rdfs:label "expansion of Enterococcus in gut of MDD patient compared to healthy human" . _:448330 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:448340; "Coriobacterium up-regulated in gut of MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:31685046"; rdfs:label "expansion of Coriobacterium in gut of MDD patient compared to healthy human" . _:448340 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:448350; "Slackia up-regulated in gut of MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:31685046"; rdfs:label "expansion of Slackia in gut of MDD patient compared to healthy human" . _:448350 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:448360; "Enterobacterales up-regulated in gut of MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:39013880"; rdfs:label "expansion of Enterobacterales in gut of MDD patient compared to healthy human" . _:448360 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:448370; "Alistipes up-regulated in gut of MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:40041700", "PMID:40621717"; rdfs:label "expansion of Alistipes in gut of MDD patient compared to healthy human" . _:448370 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:448380; "Odoribacter up-regulated in gut of MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:35153660", "PMID:40552978"; rdfs:label "expansion of Odoribacter in gut of MDD patient compared to healthy human" . _:448380 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:448390; "Parabacteroides up-regulated in gut of MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:34093266", "PMID:40717539"; rdfs:label "expansion of Parabacteroides in gut of MDD patient compared to healthy human" . _:448390 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:4483a0; "Rothia up-regulated in gut of MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:31685046"; rdfs:label "expansion of Rothia in gut of MDD patient compared to healthy human" . _:4483a0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:4483b0; "Flavonifractor up-regulated in gut of MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:39716675"; rdfs:label "expansion of Flavonifractor in gut of MDD patient compared to healthy human" . _:4483b0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:4483c0; "Intestinimonas up-regulated in gut of MDD patient compared to healthy human"; "Haihe Wang" . _:4483c0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . "Jie Zheng", "Yongqun He"; "PMID:39716675"; rdfs:label "expansion of Intestinimonas in gut of MDD patient compared to healthy human" . a owl:Class; rdfs:subClassOf , _:4483d0; "Sellimonas up-regulated in gut of MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:40494496"; rdfs:label "expansion of Sellimonas in gut of MDD patient compared to healthy human" . _:4483d0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:4483e0; "Dysosmobacter up-regulated in gut of MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:40041700"; rdfs:label "expansion of Dysosmobacter in gut of MDD patient compared to healthy human" . _:4483e0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:4483f0; "Pseudomonas up-regulated in gut of MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:30584306"; rdfs:label "expansion of Pseudomonas in gut of MDD patient compared to healthy human" . _:4483f0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:448400; "Bacteroides up-regulated in gut of MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:30927646", "PMID:33268363", "PMID:34093266", "PMID:35344817", "PMID:38417224", "PMID:39716675", "PMID:40552978"; rdfs:label "expansion of Bacteroides in gut of MDD patient compared to healthy human" . _:448400 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:448410; "Oxalobacter up-regulated in gut of MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:30584306"; rdfs:label "expansion of Oxalobacter in gut of MDD patient compared to healthy human" . _:448410 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:448420; "Megasphaera up-regulated in gut of MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:37863362"; rdfs:label "expansion of Megasphaera in gut of MDD patient compared to healthy human" . _:448420 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:448430; "Peptostreptococcus up-regulated in gut of MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:30584306", "PMID:37863362"; rdfs:label "expansion of Peptostreptococcus in gut of MDD patient compared to healthy human" . _:448430 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:448440; "Streptococcus up-regulated in gut of MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:37863362", "PMID:40494496", "PMID:40717539"; rdfs:label "expansion of Streptococcus in gut of MDD patient compared to healthy human" . _:448440 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:448450; "Gemella up-regulated in gut of MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:30584306"; rdfs:label "expansion of Gemella in gut of MDD patient compared to healthy human" . _:448450 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:448460; "Atopobium up-regulated in gut of MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:31685046"; rdfs:label "expansion of Atopobium in gut of MDD patient compared to healthy human" . _:448460 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:448470; "Actinomyces up-regulated in gut of MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:40041700"; rdfs:label "expansion of Actinomyces in gut of MDD patient compared to healthy human" . _:448470 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:448480; "Bifidobacterium up-regulated in gut of MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:30927646", "PMID:31685046", "PMID:37863362", "PMID:40717539"; rdfs:label "expansion of Bifidobacterium in gut of MDD patient compared to healthy human" . _:448480 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:448490; "Leptonema up-regulated in gut of MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:37863362"; rdfs:label "expansion of Leptonema in gut of MDD patient compared to healthy human" . _:448490 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:4484a0; "Eggerthella up-regulated in gut of MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:31685046", "PMID:39716675", "PMID:40494496"; rdfs:label "expansion of Eggerthella in gut of MDD patient compared to healthy human" . _:4484a0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:4484b0; "Granulicatella up-regulated in gut of MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:37863362"; rdfs:label "expansion of Granulicatella in gut of MDD patient compared to healthy human" . _:4484b0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:4484c0; "Bulleidia up-regulated in gut of MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:30584306"; rdfs:label "expansion of Bulleidia in gut of MDD patient compared to healthy human" . _:4484c0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:4484d0; "Olsenella up-regulated in gut of MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:31685046"; rdfs:label "expansion of Olsenella in gut of MDD patient compared to healthy human" . _:4484d0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:4484e0; "Adlercreutzia up-regulated in gut of MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:37863362", "PMID:40552978"; rdfs:label "expansion of Adlercreutzia in gut of MDD patient compared to healthy human" . _:4484e0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:4484f0; "Oscillibacter up-regulated in gut of MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:30927646"; rdfs:label "expansion of Oscillibacter in gut of MDD patient compared to healthy human" . _:4484f0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:448500; "Parvimonas up-regulated in gut of MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:30584306"; rdfs:label "expansion of Parvimonas in gut of MDD patient compared to healthy human" . _:448500 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:448510; "Lachnoanaerobaculum up-regulated in gut of MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:37863362"; rdfs:label "expansion of Lachnoanaerobaculum in gut of MDD patient compared to healthy human" . _:448510 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:448520; "Lachnoclostridium up-regulated in gut of MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:40717539"; rdfs:label "expansion of Lachnoclostridium in gut of MDD patient compared to healthy human" . _:448520 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:448530; "Fenollaria up-regulated in gut of MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:32867257"; rdfs:label "expansion of Fenollaria in gut of MDD patient compared to healthy human" . _:448530 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:448540; "Ruthenibacterium up-regulated in gut of MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:40041700"; rdfs:label "expansion of Ruthenibacterium in gut of MDD patient compared to healthy human" . _:448540 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:448550; "Thomasclavelia up-regulated in gut of MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:40041700", "PMID:40494496"; rdfs:label "expansion of Thomasclavelia in gut of MDD patient compared to healthy human" . _:448550 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:448560; "Psychrobacter up-regulated in gut of MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:37863362"; rdfs:label "expansion of Psychrobacter in gut of MDD patient compared to healthy human" . _:448560 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:448570; "Enterobacteriaceae up-regulated in gut of MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:39013880", "PMID:40717539"; rdfs:label "expansion of Enterobacteriaceae in gut of MDD patient compared to healthy human" . _:448570 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:448580; "Streptococcaceae up-regulated in gut of MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:39719433"; rdfs:label "expansion of Streptococcaceae in gut of MDD patient compared to healthy human" . _:448580 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:448590; "Bifidobacteriaceae up-regulated in gut of MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:40717539"; rdfs:label "expansion of Bifidobacteriaceae in gut of MDD patient compared to healthy human" . _:448590 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:4485a0; "Veillonellaceae up-regulated in gut of MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:40717539"; rdfs:label "expansion of Veillonellaceae in gut of MDD patient compared to healthy human" . _:4485a0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:4485b0; "Lactobacillaceae up-regulated in gut of MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:39719433"; rdfs:label "expansion of Lactobacillaceae in gut of MDD patient compared to healthy human" . _:4485b0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:4485c0; "Flavobacteriaceae up-regulated in gut of MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:32867257"; rdfs:label "expansion of Flavobacteriaceae in gut of MDD patient compared to healthy human" . _:4485c0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:4485d0; "Rikenellaceae up-regulated in gut of MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:34093266"; rdfs:label "expansion of Rikenellaceae in gut of MDD patient compared to healthy human" . _:4485d0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:4485e0; "Porphyromonadaceae up-regulated in gut of MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:34093266"; rdfs:label "expansion of Porphyromonadaceae in gut of MDD patient compared to healthy human" . _:4485e0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:4485f0; "Deinococcaceae up-regulated in gut of MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:35153660"; rdfs:label "expansion of Deinococcaceae in gut of MDD patient compared to healthy human" . _:4485f0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:448600; "Paenibacillaceae up-regulated in gut of MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:32867257"; rdfs:label "expansion of Paenibacillaceae in gut of MDD patient compared to healthy human" . _:448600 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:448610; "Tannerellaceae up-regulated in gut of MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:40717539"; rdfs:label "expansion of Tannerellaceae in gut of MDD patient compared to healthy human" . _:448610 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:448620; "Pseudomonadales up-regulated in gut of MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:36699448"; rdfs:label "expansion of Pseudomonadales in gut of MDD patient compared to healthy human" . _:448620 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:448630; "Verrucomicrobia up-regulated in gut of MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:40552978"; rdfs:label "expansion of Verrucomicrobia in gut of MDD patient compared to healthy human" . _:448630 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:448640; "Actinomycetota up-regulated in gut of MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:30927646", "PMID:31685046", "PMID:36699448", "PMID:37863362"; rdfs:label "expansion of Actinomycetota in gut of MDD patient compared to healthy human" . _:448640 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:448650; "Spirochaetota up-regulated in gut of MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:37863362"; rdfs:label "expansion of Spirochaetota in gut of MDD patient compared to healthy human" . _:448650 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:448660; "Lentisphaerota up-regulated in gut of MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:40552978"; rdfs:label "expansion of Lentisphaerota in gut of MDD patient compared to healthy human" . _:448660 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:448670; "Enterocloster clostridioformis down-regulated in gut of MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:39719433"; rdfs:label "depletion of Enterocloster clostridioformis in gut of MDD patient compared to healthy human" . _:448670 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:448680; "Lactobacillus sp. down-regulated in gut of MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:39217732"; rdfs:label "depletion of Lactobacillus sp. in gut of MDD patient compared to healthy human" . _:448680 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:448690; "Amycolatopsis sp. down-regulated in gut of MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:41173853"; rdfs:label "depletion of Amycolatopsis sp. in gut of MDD patient compared to healthy human" . _:448690 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:4486a0; "Dorea formicigenerans down-regulated in gut of MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:39719433"; rdfs:label "depletion of Dorea formicigenerans in gut of MDD patient compared to healthy human" . _:4486a0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:4486b0; "Anaerobutyricum hallii down-regulated in gut of MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:33268363", "PMID:39719433"; rdfs:label "depletion of Anaerobutyricum hallii in gut of MDD patient compared to healthy human" . _:4486b0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:4486c0; "Eubacterium ventriosum down-regulated in gut of MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:33268363"; rdfs:label "depletion of Eubacterium ventriosum in gut of MDD patient compared to healthy human" . _:4486c0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:4486d0; "Eubacterium xylanophilum down-regulated in gut of MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:40717539"; rdfs:label "depletion of Eubacterium xylanophilum in gut of MDD patient compared to healthy human" . _:4486d0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:4486e0; "Blautia obeum down-regulated in gut of MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:33268363"; rdfs:label "depletion of Blautia obeum in gut of MDD patient compared to healthy human" . _:4486e0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:4486f0; "Fusobacterium sp. down-regulated in gut of MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:39217732"; rdfs:label "depletion of Fusobacterium sp. in gut of MDD patient compared to healthy human" . _:4486f0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:448700; "Shewanella livingstonensis down-regulated in gut of MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:41173853"; rdfs:label "depletion of Shewanella livingstonensis in gut of MDD patient compared to healthy human" . _:448700 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:448710; "Phocaeicola plebeius down-regulated in gut of MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:39719433"; rdfs:label "depletion of Phocaeicola plebeius in gut of MDD patient compared to healthy human" . _:448710 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:448720; "Phocaeicola coprocola down-regulated in gut of MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:39719433"; rdfs:label "depletion of Phocaeicola coprocola in gut of MDD patient compared to healthy human" . _:448720 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:448730; "Blautia wexlerae down-regulated in gut of MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:33268363"; rdfs:label "depletion of Blautia wexlerae in gut of MDD patient compared to healthy human" . _:448730 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:448740; "Megamonas funiformis down-regulated in gut of MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:39719433"; rdfs:label "depletion of Megamonas funiformis in gut of MDD patient compared to healthy human" . _:448740 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:448750; "Anaerostipes hadrus down-regulated in gut of MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:39719433"; rdfs:label "depletion of Anaerostipes hadrus in gut of MDD patient compared to healthy human" . _:448750 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:448760; "Fusicatenibacter saccharivorans down-regulated in gut of MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:39719433"; rdfs:label "depletion of Fusicatenibacter saccharivorans in gut of MDD patient compared to healthy human" . _:448760 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:448770; "Streptococcus rubneri down-regulated in gut of MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:39719433"; rdfs:label "depletion of Streptococcus rubneri in gut of MDD patient compared to healthy human" . _:448770 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:448780; "Clostridium sp. CAG:217 down-regulated in gut of MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:33268363"; rdfs:label "depletion of Clostridium sp. CAG:217 in gut of MDD patient compared to healthy human" . _:448780 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:448790; "Clostridium sp. CAG:510 down-regulated in gut of MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:33268363"; rdfs:label "depletion of Clostridium sp. CAG:510 in gut of MDD patient compared to healthy human" . _:448790 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:4487a0; "Clostridium sp. CAG:62 down-regulated in gut of MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:33268363"; rdfs:label "depletion of Clostridium sp. CAG:62 in gut of MDD patient compared to healthy human" . _:4487a0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:4487b0; "Eubacterium sp. CAG:156 down-regulated in gut of MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:33268363"; rdfs:label "depletion of Eubacterium sp. CAG:156 in gut of MDD patient compared to healthy human" . _:4487b0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:4487c0; "Eubacterium sp. CAG:202 down-regulated in gut of MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:33268363"; rdfs:label "depletion of Eubacterium sp. CAG:202 in gut of MDD patient compared to healthy human" . _:4487c0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:4487d0; "Romboutsia timonensis down-regulated in gut of MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:39719433"; rdfs:label "depletion of Romboutsia timonensis in gut of MDD patient compared to healthy human" . _:4487d0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:4487e0; "Paraglaciecola sp. down-regulated in gut of MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:41173853"; rdfs:label "depletion of Paraglaciecola sp. in gut of MDD patient compared to healthy human" . _:4487e0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:4487f0; "Nannocystis sp. down-regulated in gut of MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:41173853"; rdfs:label "depletion of Nannocystis sp. in gut of MDD patient compared to healthy human" . _:4487f0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:448800; "Faecalibacillus intestinalis down-regulated in gut of MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:39719433"; rdfs:label "depletion of Faecalibacillus intestinalis in gut of MDD patient compared to healthy human" . _:448800 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:448810; "Bacteroidaceae bacterium down-regulated in gut of MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:39719433"; rdfs:label "depletion of Bacteroidaceae bacterium in gut of MDD patient compared to healthy human" . _:448810 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:448820; "Gordonia insulae down-regulated in gut of MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:41173853"; rdfs:label "depletion of Gordonia insulae in gut of MDD patient compared to healthy human" . _:448820 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:448830; "Arsenophonus apicola down-regulated in gut of MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:41173853"; rdfs:label "depletion of Arsenophonus apicola in gut of MDD patient compared to healthy human" . _:448830 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:448840; "Bacteroidetes helcogenes down-regulated in gut of MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:30927646"; rdfs:label "depletion of Bacteroidetes helcogenes in gut of MDD patient compared to healthy human" . _:448840 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:448850; "Haemophilus parainfluenzae T3T1 down-regulated in gut of MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:30927646"; rdfs:label "depletion of Haemophilus parainfluenzae T3T1 in gut of MDD patient compared to healthy human" . _:448850 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:448860; "Enterobacter down-regulated in gut of MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:35153660"; rdfs:label "depletion of Enterobacter in gut of MDD patient compared to healthy human" . _:448860 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:448870; "Prevotella down-regulated in gut of MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:34093266", "PMID:35344817", "PMID:39013880", "PMID:39716675", "PMID:40494496", "PMID:40552978"; rdfs:label "depletion of Prevotella in gut of MDD patient compared to healthy human" . _:448870 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:448880; "Thauera down-regulated in gut of MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:37863362"; rdfs:label "depletion of Thauera in gut of MDD patient compared to healthy human" . _:448880 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:448890; "Dialister down-regulated in gut of MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:40494496"; rdfs:label "depletion of Dialister in gut of MDD patient compared to healthy human" . _:448890 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:4488a0; "Pseudobutyrivibrio down-regulated in gut of MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:40041700"; rdfs:label "depletion of Pseudobutyrivibrio in gut of MDD patient compared to healthy human" . _:4488a0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:4488b0; "Anaerostipes down-regulated in gut of MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:39716675"; rdfs:label "depletion of Anaerostipes in gut of MDD patient compared to healthy human" . _:4488b0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:4488c0; "Faecalibacterium down-regulated in gut of MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:34589003", "PMID:38417224"; rdfs:label "depletion of Faecalibacterium in gut of MDD patient compared to healthy human" . _:4488c0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:4488d0; "Barnesiella down-regulated in gut of MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng" . _:4488d0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . "Yongqun He"; "PMID:39716675"; rdfs:label "depletion of Barnesiella in gut of MDD patient compared to healthy human" . a owl:Class; rdfs:subClassOf , _:4488e0; "Paraprevotella down-regulated in gut of MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:39716675"; rdfs:label "depletion of Paraprevotella in gut of MDD patient compared to healthy human" . _:4488e0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:4488f0; "Lachnospira down-regulated in gut of MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:38972643"; rdfs:label "depletion of Lachnospira in gut of MDD patient compared to healthy human" . _:4488f0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:448900; "Sutterella down-regulated in gut of MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:37863362"; rdfs:label "depletion of Sutterella in gut of MDD patient compared to healthy human" . _:448900 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:448910; "Weissella down-regulated in gut of MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:37863362"; rdfs:label "depletion of Weissella in gut of MDD patient compared to healthy human" . _:448910 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:448920; "Dorea down-regulated in gut of MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:30584306"; rdfs:label "depletion of Dorea in gut of MDD patient compared to healthy human" . _:448920 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:448930; "Butyricicoccus down-regulated in gut of MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:37863362"; rdfs:label "depletion of Butyricicoccus in gut of MDD patient compared to healthy human" . _:448930 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:448940; "Agathobacter down-regulated in gut of MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:39013880"; rdfs:label "depletion of Agathobacter in gut of MDD patient compared to healthy human" . _:448940 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:448950; "Clostridiaceae down-regulated in gut of MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:30584306", "PMID:35153660", "PMID:39719433", "PMID:40717539"; rdfs:label "depletion of Clostridiaceae in gut of MDD patient compared to healthy human" . _:448950 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:448960; "Prevotellaceae down-regulated in gut of MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:34093266", "PMID:39013880"; rdfs:label "depletion of Prevotellaceae in gut of MDD patient compared to healthy human" . _:448960 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:448970; "Lachnospiraceae down-regulated in gut of MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:30584306"; rdfs:label "depletion of Lachnospiraceae in gut of MDD patient compared to healthy human" . _:448970 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:448980; "Ruminococcaceae down-regulated in gut of MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:30584306"; rdfs:label "depletion of Ruminococcaceae in gut of MDD patient compared to healthy human" . _:448980 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:448990; "Christensenellaceae down-regulated in gut of MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:40717539"; rdfs:label "depletion of Christensenellaceae in gut of MDD patient compared to healthy human" . _:448990 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:4489a0; "Barnesiellaceae down-regulated in gut of MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:35153660"; rdfs:label "depletion of Barnesiellaceae in gut of MDD patient compared to healthy human" . _:4489a0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:4489b0; "Turicibacteraceae down-regulated in gut of MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:35153660"; rdfs:label "depletion of Turicibacteraceae in gut of MDD patient compared to healthy human" . _:4489b0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:4489c0; "Hyphomicrobiales down-regulated in gut of MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:36699448"; rdfs:label "depletion of Hyphomicrobiales in gut of MDD patient compared to healthy human" . _:4489c0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:4489d0; "Mollicutes down-regulated in gut of MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:36699448"; rdfs:label "depletion of Mollicutes in gut of MDD patient compared to healthy human" . _:4489d0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:4489e0; "Planctomycetes down-regulated in gut of MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:37863362"; rdfs:label "depletion of Planctomycetes in gut of MDD patient compared to healthy human" . _:4489e0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:4489f0; "Mycoplasmatota down-regulated in gut of MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:36699448"; rdfs:label "depletion of Mycoplasmatota in gut of MDD patient compared to healthy human" . _:4489f0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:448a00; "Porphyromonas up-regulated in gut of active-phase MDD patient compared to remission-phase MDD patient"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:35899051"; rdfs:label "expansion of Porphyromonas in gut of active-phase MDD patient compared to remission-phase MDD patient" . _:448a00 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:448a10; "Phascolarctobacterium up-regulated in gut of active-phase MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:2588291235750110"; rdfs:label "expansion of Phascolarctobacterium in gut of active-phase MDD patient compared to healthy human" . _:448a10 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:448a20; "Streptococcus up-regulated in gut of active-phase MDD patient compared to remission-phase MDD patient"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:35750110"; rdfs:label "expansion of Streptococcus in gut of active-phase MDD patient compared to remission-phase MDD patient" . _:448a20 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:448a30; "Bilophila up-regulated in gut of active-phase MDD patient compared to remission-phase MDD patient"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:34934041", "PMID:35899051"; rdfs:label "expansion of Bilophila in gut of active-phase MDD patient compared to remission-phase MDD patient" . _:448a30 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:448a40; "Alistipes up-regulated in gut of active-phase MDD patient compared to remission-phase MDD patient"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:25882912", "PMID:34934041", "PMID:35899051"; rdfs:label "expansion of Alistipes in gut of active-phase MDD patient compared to remission-phase MDD patient" . _:448a40 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:448a50; "Akkermansia up-regulated in gut of active-phase MDD patient compared to remission-phase MDD patient"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:35750110"; rdfs:label "expansion of Akkermansia in gut of active-phase MDD patient compared to remission-phase MDD patient" . _:448a50 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:448a60; "Anaerotruncus up-regulated in gut of active-phase MDD patient compared to remission-phase MDD patient"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:35899051"; rdfs:label "expansion of Anaerotruncus in gut of active-phase MDD patient compared to remission-phase MDD patient" . _:448a60 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:448a70; "Acetanaerobacterium up-regulated in gut of active-phase MDD patient compared to remission-phase MDD patient"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:35899051"; rdfs:label "expansion of Acetanaerobacterium in gut of active-phase MDD patient compared to remission-phase MDD patient" . _:448a70 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:448a80; "Odoribacter up-regulated in gut of active-phase MDD patient compared to remission-phase MDD patient"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:35899051"; rdfs:label "expansion of Odoribacter in gut of active-phase MDD patient compared to remission-phase MDD patient" . _:448a80 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:448a90; "Parabacteroides up-regulated in gut of active-phase MDD patient compared to remission-phase MDD patient"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:25882912", "PMID:35899051"; rdfs:label "expansion of Parabacteroides in gut of active-phase MDD patient compared to remission-phase MDD patient" . _:448a90 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:448aa0; "Oscillibacter up-regulated in gut of active-phase MDD patient compared to remission-phase MDD patient"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:25882912"; rdfs:label "expansion of Oscillibacter in gut of active-phase MDD patient compared to remission-phase MDD patient" . _:448aa0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:448ab0; "Butyricimonas up-regulated in gut of active-phase MDD patient compared to remission-phase MDD patient"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:35899051"; rdfs:label "expansion of Butyricimonas in gut of active-phase MDD patient compared to remission-phase MDD patient" . _:448ab0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:448ac0; "Parasutterella up-regulated in gut of active-phase MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:25882912"; rdfs:label "expansion of Parasutterella in gut of active-phase MDD patient compared to healthy human" . _:448ac0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:448ad0; "Flavonifractor up-regulated in gut of active-phase MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:35899051"; rdfs:label "expansion of Flavonifractor in gut of active-phase MDD patient compared to healthy human" . _:448ad0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:448ae0; "Megasphaera up-regulated in gut of active-phase MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:35899051"; rdfs:label "expansion of Megasphaera in gut of active-phase MDD patient compared to healthy human" . _:448ae0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:448af0; "Eggerthella up-regulated in gut of active-phase MDD patient compared to remission-phase MDD patient"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:35899051"; rdfs:label "expansion of Eggerthella in gut of active-phase MDD patient compared to remission-phase MDD patient" . _:448af0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:448b00; "Peptoniphilus up-regulated in gut of active-phase MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:35899051"; rdfs:label "expansion of Peptoniphilus in gut of active-phase MDD patient compared to healthy human" . _:448b00 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:448b10; "Enterobacteriaceae up-regulated in gut of active-phase MDD patient compared to remission-phase MDD patient"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:25882912"; rdfs:label "expansion of Enterobacteriaceae in gut of active-phase MDD patient compared to remission-phase MDD patient" . _:448b10 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:448b20; "Rikenellaceae up-regulated in gut of active-phase MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:25882912"; rdfs:label "expansion of Rikenellaceae in gut of active-phase MDD patient compared to healthy human" . _:448b20 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:448b30; "Porphyromonadaceae up-regulated in gut of active-phase MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:25882912"; rdfs:label "expansion of Porphyromonadaceae in gut of active-phase MDD patient compared to healthy human" . _:448b30 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:448b40; "Fusobacteriaceae up-regulated in gut of active-phase MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:25882912"; rdfs:label "expansion of Fusobacteriaceae in gut of active-phase MDD patient compared to healthy human" . _:448b40 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:448b50; "Acidaminococcaceae up-regulated in gut of active-phase MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:25882912"; rdfs:label "expansion of Acidaminococcaceae in gut of active-phase MDD patient compared to healthy human" . _:448b50 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:448b60; "Bacteroidota up-regulated in gut of active-phase MDD patient compared to remission-phase MDD patient"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:25882912"; rdfs:label "expansion of Bacteroidota in gut of active-phase MDD patient compared to remission-phase MDD patient" . _:448b60 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:448b70; "Pseudomonadota up-regulated in gut of active-phase MDD patient compared to remission-phase MDD patient"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:25882912"; rdfs:label "expansion of Pseudomonadota in gut of active-phase MDD patient compared to remission-phase MDD patient" . _:448b70 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:448b80; "Actinomycetota up-regulated in gut of active-phase MDD patient compared to remission-phase MDD patient"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:25882912"; rdfs:label "expansion of Actinomycetota in gut of active-phase MDD patient compared to remission-phase MDD patient" . _:448b80 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:448b90; "Bacteroides fragilis down-regulated in gut of active-phase MDD patient compared to remission-phase MDD patient"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:35750110"; rdfs:label "depletion of Bacteroides fragilis in gut of active-phase MDD patient compared to remission-phase MDD patient" . _:448b90 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:448ba0; "Phocaeicola plebeius down-regulated in gut of active-phase MDD patient compared to remission-phase MDD patient"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:35750110"; rdfs:label "depletion of Phocaeicola plebeius in gut of active-phase MDD patient compared to remission-phase MDD patient" . _:448ba0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:448bb0; "Klebsiella down-regulated in gut of active-phase MDD patient compared to remission-phase MDD patient"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:35899051"; rdfs:label "depletion of Klebsiella in gut of active-phase MDD patient compared to remission-phase MDD patient" . _:448bb0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:448bc0; "Bacteroides down-regulated in gut of active-phase MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:25882912"; rdfs:label "depletion of Bacteroides in gut of active-phase MDD patient compared to healthy human" . _:448bc0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:448bd0; "Prevotella down-regulated in gut of active-phase MDD patient compared to remission-phase MDD patient"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:25882912", "PMID:35899051"; rdfs:label "depletion of Prevotella in gut of active-phase MDD patient compared to remission-phase MDD patient" . _:448bd0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:448be0; "Ruminococcus down-regulated in gut of active-phase MDD patient compared to remission-phase MDD patient"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:25882912"; rdfs:label "depletion of Ruminococcus in gut of active-phase MDD patient compared to remission-phase MDD patient" . _:448be0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:448bf0; "Dialister down-regulated in gut of active-phase MDD patient compared to remission-phase MDD patient"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:25882912"; rdfs:label "depletion of Dialister in gut of active-phase MDD patient compared to remission-phase MDD patient" . _:448bf0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:448c00; "Victivallis down-regulated in gut of active-phase MDD patient compared to remission-phase MDD patient"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:35899051"; rdfs:label "depletion of Victivallis in gut of active-phase MDD patient compared to remission-phase MDD patient" . _:448c00 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:448c10; "Anaerostipes down-regulated in gut of active-phase MDD patient compared to remission-phase MDD patient"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:34934041"; rdfs:label "depletion of Anaerostipes in gut of active-phase MDD patient compared to remission-phase MDD patient" . _:448c10 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:448c20; "Faecalibacterium down-regulated in gut of active-phase MDD patient compared to remission-phase MDD patient"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:25882912"; rdfs:label "depletion of Faecalibacterium in gut of active-phase MDD patient compared to remission-phase MDD patient" . _:448c20 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:448c30; "Hydrogenoanaerobacterium down-regulated in gut of active-phase MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:35899051"; rdfs:label "depletion of Hydrogenoanaerobacterium in gut of active-phase MDD patient compared to healthy human" . _:448c30 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:448c40; "Gordonibacter down-regulated in gut of active-phase MDD patient compared to remission-phase MDD patient"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:35899051"; rdfs:label "depletion of Gordonibacter in gut of active-phase MDD patient compared to remission-phase MDD patient" . _:448c40 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:448c50; "Lactococcus down-regulated in gut of active-phase MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:35899051"; rdfs:label "depletion of Lactococcus in gut of active-phase MDD patient compared to healthy human" . _:448c50 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:448c60; "Sutterella down-regulated in gut of active-phase MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:35899051"; rdfs:label "depletion of Sutterella in gut of active-phase MDD patient compared to healthy human" . _:448c60 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:448c70; "Dorea down-regulated in gut of active-phase MDD patient compared to remission-phase MDD patient"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:35899051"; rdfs:label "depletion of Dorea in gut of active-phase MDD patient compared to remission-phase MDD patient" . _:448c70 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:448c80; "Enterorhabdus down-regulated in gut of active-phase MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:35899051"; rdfs:label "depletion of Enterorhabdus in gut of active-phase MDD patient compared to healthy human" . _:448c80 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:448c90; "Pyramidobacter down-regulated in gut of active-phase MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:35899051"; rdfs:label "depletion of Pyramidobacter in gut of active-phase MDD patient compared to healthy human" . _:448c90 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:448ca0; "Erysipelotrichaceae down-regulated in gut of active-phase MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:25882912"; rdfs:label "depletion of Erysipelotrichaceae in gut of active-phase MDD patient compared to healthy human" . _:448ca0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:448cb0; "Prevotellaceae down-regulated in gut of active-phase MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:25882912"; rdfs:label "depletion of Prevotellaceae in gut of active-phase MDD patient compared to healthy human" . _:448cb0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:448cc0; "Lachnospiraceae down-regulated in gut of active-phase MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:25882912"; rdfs:label "depletion of Lachnospiraceae in gut of active-phase MDD patient compared to healthy human" . _:448cc0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:448cd0; "Ruminococcaceae down-regulated in gut of active-phase MDD patient compared to remission-phase MDD patient"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:25882912"; rdfs:label "depletion of Ruminococcaceae in gut of active-phase MDD patient compared to remission-phase MDD patient" . _:448cd0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:448ce0; "Firmicutes down-regulated in gut of active-phase MDD patient compared to remission-phase MDD patient"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:25882912"; rdfs:label "depletion of Firmicutes in gut of active-phase MDD patient compared to remission-phase MDD patient" . _:448ce0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:448cf0; "Bacteroides caccae up-regulated in gut of female MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:33421868"; rdfs:label "expansion of Bacteroides caccae in gut of female MDD patient compared to healthy human" . _:448cf0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:448d00; "Alistipes finegoldii up-regulated in gut of female MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:33421868"; rdfs:label "expansion of Alistipes finegoldii in gut of female MDD patient compared to healthy human" . _:448d00 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:448d10; "Alistipes onderdonkii up-regulated in gut of female MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:33421868"; rdfs:label "expansion of Alistipes onderdonkii in gut of female MDD patient compared to healthy human" . _:448d10 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:448d20; "Barnesiella intestinihominis up-regulated in gut of female MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:33421868"; rdfs:label "expansion of Barnesiella intestinihominis in gut of female MDD patient compared to healthy human" . _:448d20 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:448d30; "Campylobacter up-regulated in gut of female MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:33421868"; rdfs:label "expansion of Campylobacter in gut of female MDD patient compared to healthy human" . _:448d30 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:448d40; "Alistipes up-regulated in gut of female MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:33421868"; rdfs:label "expansion of Alistipes in gut of female MDD patient compared to healthy human" . _:448d40 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:448d50; "Anaerotruncus up-regulated in gut of female MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:33421868"; rdfs:label "expansion of Anaerotruncus in gut of female MDD patient compared to healthy human" . _:448d50 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:448d60; "Parabacteroides up-regulated in gut of female MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:33421868"; rdfs:label "expansion of Parabacteroides in gut of female MDD patient compared to healthy human" . _:448d60 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:448d70; "Barnesiella up-regulated in gut of female MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:33421868"; rdfs:label "expansion of Barnesiella in gut of female MDD patient compared to healthy human" . _:448d70 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:448d80; "Flavonifractor up-regulated in gut of female MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:33421868"; rdfs:label "expansion of Flavonifractor in gut of female MDD patient compared to healthy human" . _:448d80 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:448d90; "Desulfovibrio up-regulated in gut of female MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:29520144"; rdfs:label "expansion of Desulfovibrio in gut of female MDD patient compared to healthy human" . _:448d90 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:448da0; "Atopobium up-regulated in gut of female MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:29520144"; rdfs:label "expansion of Atopobium in gut of female MDD patient compared to healthy human" . _:448da0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:448db0; "Actinomyces up-regulated in gut of female MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:29520144"; rdfs:label "expansion of Actinomyces in gut of female MDD patient compared to healthy human" . _:448db0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:448dc0; "Bifidobacterium up-regulated in gut of female MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:29520144"; rdfs:label "expansion of Bifidobacterium in gut of female MDD patient compared to healthy human" . _:448dc0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:448dd0; "Eggerthella up-regulated in gut of female MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:29520144"; rdfs:label "expansion of Eggerthella in gut of female MDD patient compared to healthy human" . _:448dd0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:448de0; "Olsenella up-regulated in gut of female MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:29520144"; rdfs:label "expansion of Olsenella in gut of female MDD patient compared to healthy human" . _:448de0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:448df0; "Asaccharobacter up-regulated in gut of female MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:29520144"; rdfs:label "expansion of Asaccharobacter in gut of female MDD patient compared to healthy human" . _:448df0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:448e00 . _:448e00 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . "Gordonibacter up-regulated in gut of female MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:29520144"; rdfs:label "expansion of Gordonibacter in gut of female MDD patient compared to healthy human" . a owl:Class; rdfs:subClassOf , _:448e10; "Enterobacteriaceae up-regulated in gut of female MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:33421868"; rdfs:label "expansion of Enterobacteriaceae in gut of female MDD patient compared to healthy human" . _:448e10 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:448e20; "Corynebacteriaceae up-regulated in gut of female MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:33421868"; rdfs:label "expansion of Corynebacteriaceae in gut of female MDD patient compared to healthy human" . _:448e20 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:448e30; "Campylobacteraceae up-regulated in gut of female MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:33421868"; rdfs:label "expansion of Campylobacteraceae in gut of female MDD patient compared to healthy human" . _:448e30 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:448e40; "Coriobacteriaceae up-regulated in gut of female MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:29520144"; rdfs:label "expansion of Coriobacteriaceae in gut of female MDD patient compared to healthy human" . _:448e40 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:448e50; "Burkholderiaceae up-regulated in gut of female MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:33421868"; rdfs:label "expansion of Burkholderiaceae in gut of female MDD patient compared to healthy human" . _:448e50 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:448e60; "Tannerellaceae up-regulated in gut of female MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:33421868"; rdfs:label "expansion of Tannerellaceae in gut of female MDD patient compared to healthy human" . _:448e60 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:448e70; "Bacteroidetes up-regulated in gut of female MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:33421868"; rdfs:label "expansion of Bacteroidetes in gut of female MDD patient compared to healthy human" . _:448e70 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:448e80; "Fusobacteria up-regulated in gut of female MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:33421868"; rdfs:label "expansion of Fusobacteria in gut of female MDD patient compared to healthy human" . _:448e80 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:448e90; "Faecalibacterium prausnitzii down-regulated in gut of female MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:33421868"; rdfs:label "depletion of Faecalibacterium prausnitzii in gut of female MDD patient compared to healthy human" . _:448e90 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:448ea0; "Agathobacter rectalis down-regulated in gut of female MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:33421868"; rdfs:label "depletion of Agathobacter rectalis in gut of female MDD patient compared to healthy human" . _:448ea0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:448eb0; "Roseburia homini down-regulated in gut of female MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:33421868"; rdfs:label "depletion of Roseburia homini in gut of female MDD patient compared to healthy human" . _:448eb0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:448ec0; "Roseburia inulinivorans down-regulated in gut of female MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:33421868"; rdfs:label "depletion of Roseburia inulinivorans in gut of female MDD patient compared to healthy human" . _:448ec0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:448ed0; "Sutterella down-regulated in gut of female MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:29520144"; rdfs:label "depletion of Sutterella in gut of female MDD patient compared to healthy human" . _:448ed0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:448ee0; "Faecalibacterium down-regulated in gut of female MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:33421868"; rdfs:label "depletion of Faecalibacterium in gut of female MDD patient compared to healthy human" . _:448ee0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:448ef0; "Howardella down-regulated in gut of female MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:29520144"; rdfs:label "depletion of Howardella in gut of female MDD patient compared to healthy human" . _:448ef0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:448f00; "Pyramidobacter down-regulated in gut of female MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:29520144"; rdfs:label "depletion of Pyramidobacter in gut of female MDD patient compared to healthy human" . _:448f00 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:448f10; "Firmicutes down-regulated in gut of female MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:33421868"; rdfs:label "depletion of Firmicutes in gut of female MDD patient compared to healthy human" . _:448f10 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:448f20; "Akkermansia up-regulated in gut of adolescent MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:40390033"; rdfs:label "expansion of Akkermansia in gut of adolescent MDD patient compared to healthy human" . _:448f20 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:448f30; "Barnesiella up-regulated in gut of adolescent MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:41339503"; rdfs:label "expansion of Barnesiella in gut of adolescent MDD patient compared to healthy human" . _:448f30 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:448f40; "Parasutterella up-regulated in gut of adolescent MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:41339503"; rdfs:label "expansion of Parasutterella in gut of adolescent MDD patient compared to healthy human" . _:448f40 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:448f50; "Intestinimonas up-regulated in gut of adolescent MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:41339503"; rdfs:label "expansion of Intestinimonas in gut of adolescent MDD patient compared to healthy human" . _:448f50 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:448f60; "Lawsonibacter up-regulated in gut of adolescent MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:41339503"; rdfs:label "expansion of Lawsonibacter in gut of adolescent MDD patient compared to healthy human" . _:448f60 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:448f70; "Eggerthellaceae up-regulated in gut of adolescent MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:40390033"; rdfs:label "expansion of Eggerthellaceae in gut of adolescent MDD patient compared to healthy human" . _:448f70 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:448f80; "Bacteroidetes up-regulated in gut of adolescent MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:33421868"; rdfs:label "expansion of Bacteroidetes in gut of adolescent MDD patient compared to healthy human" . _:448f80 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:448f90; "Bifidobacterium animalis down-regulated in gut of adolescent MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:40390033"; rdfs:label "depletion of Bifidobacterium animalis in gut of adolescent MDD patient compared to healthy human" . _:448f90 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:448fa0; "Haemophilus down-regulated in gut of adolescent MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:41339503"; rdfs:label "depletion of Haemophilus in gut of adolescent MDD patient compared to healthy human" . _:448fa0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:448fb0; "Dialister down-regulated in gut of adolescent MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:41339503"; rdfs:label "depletion of Dialister in gut of adolescent MDD patient compared to healthy human" . _:448fb0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:448fc0; "Solobacterium down-regulated in gut of adolescent MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:41339503"; rdfs:label "depletion of Solobacterium in gut of adolescent MDD patient compared to healthy human" . _:448fc0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:448fd0; "Faecalibacterium down-regulated in gut of adolescent MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:40390033"; rdfs:label "depletion of Faecalibacterium in gut of adolescent MDD patient compared to healthy human" . _:448fd0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:448fe0; "Collinsella down-regulated in gut of adolescent MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:41339503"; rdfs:label "depletion of Collinsella in gut of adolescent MDD patient compared to healthy human" . _:448fe0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:448ff0; "Hungatella down-regulated in gut of adolescent MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:41339503"; rdfs:label "depletion of Hungatella in gut of adolescent MDD patient compared to healthy human" . _:448ff0 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:449000; "Agathobaculum down-regulated in gut of adolescent MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:41339503"; rdfs:label "depletion of Agathobaculum in gut of adolescent MDD patient compared to healthy human" . _:449000 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf , _:449010; "Firmicutes down-regulated in gut of adolescent MDD patient compared to healthy human"; "Haihe Wang", "Jie Zheng", "Yongqun He"; "PMID:33421868"; rdfs:label "depletion of Firmicutes in gut of adolescent MDD patient compared to healthy human" . _:449010 a owl:Restriction; owl:onProperty ; owl:someValuesFrom . a owl:Class; rdfs:subClassOf ; "A dependent entity that inheres in a bearer by virtue of how the bearer is related to other entities"; ; "PATO:0000001"; rdfs:label "quality" . a owl:Class; rdfs:subClassOf ; "A time quality inhering in a bearer by virtue of how long the bearer has existed."; ; "quality"; "PATO:0000011"; , ; rdfs:label "age" . a owl:Class; rdfs:subClassOf ; "An organismal quality inhering in a bearer by virtue of the bearer's ability to undergo sexual reproduction in order to differentiate the individuals or types involved."; ; "quality"; "PATO:0000047"; ; rdfs:label "biological sex" . a owl:Class; rdfs:subClassOf ; "A quality of a physical entity that exists through action of continuants at the physical level of organisation in relation to other entities."; ; "PATO:0002079"; "Wikipedia:Physical_property"; "relational physical quality"; "quality"; "PATO:0001018"; ; rdfs:label "physical quality" . a owl:Class; rdfs:subClassOf ; "A physical quality which inheres in a bearer by virtue of some influence is exerted by the bearer's mass per unit size."; ; "quality"; "density"; "PATO:0001019"; , ; rdfs:label "mass density" . a owl:Class; rdfs:subClassOf ; "A quality which inheres in an process."; ; "PATO:0001239", "PATO:0001240"; "quality of a process", "quality of occurrent", "quality of process", "relational quality of occurrent"; "quality"; "PATO:0001236"; rdfs:comment "See comments of relational quality of a physical entity."; rdfs:label "process quality" . a owl:Class; rdfs:subClassOf ; "A quality which inheres in a continuant."; ; "PATO:0001237", "PATO:0001238"; "snap:Quality"; "monadic quality of a continuant", "multiply inhering quality of a physical entity", "quality of a continuant", "quality of a single physical entity", "quality of an object", "quality of continuant"; "monadic quality of an object", "monadic quality of continuant"; "quality"; "PATO:0001241"; rdfs:comment "Relational qualities are qualities that hold between multiple entities. Normal (monadic) qualities such as the shape of a eyeball exist purely as a quality of that eyeball. A relational quality such as sensitivity to light is a quality of that eyeball (and connecting nervous system) as it relates to incoming light waves/particles."; rdfs:label "physical object quality" . a owl:Class; rdfs:subClassOf ; "A quality that inheres in an entire organism or part of an organism."; ; "quality"; "PATO:0001995"; rdfs:label "organismal quality" . a owl:Class; rdfs:subClassOf ; "A quality that inheres in an entire population or part of a population."; ; "quality"; "PATO:0002003"; ; rdfs:label "population quality" . a owl:Class; rdfs:subClassOf ; "Examples include: population, community, species (meaning the collection of organisms that makes up a species, not the taxonomic rank), and family."; ; "A material entity that consists of two or more organisms, viruses, or viroids."@en; "group of organism", "organism collection"; ; rdfs:comment "May be of the same or different species."; rdfs:label "collection of organisms"@en . a owl:Class; rdfs:subClassOf ; ; "A quality that inheres in a community."@en; "These may not belong under BFO:quality. May be better to call them community characteristics, and classify as specifically dependent continuants. Need to look at process profiles in BFO2."@en; ; rdfs:comment "Includes qualities like diversity, species richness, stability, resilience, community structure, number of trophic levels. A community quality may depend on the qualities of individual organism in the community, but cannot be measured or described for a single individual."@en; rdfs:label "quality of an ecological community"@en . a owl:Class; rdfs:subClassOf ; ; "The number of different species represented in an ecological community."@en; "This is a quality of an ecological community (PCO_0000002). If your metric includes the abundances of species (evenness) as well as the number, you should use community species diversity (PCO_0000019)."@en; "adapted from http://en.wikipedia.org/wiki/Species_richness"; ; rdfs:label "community species richness"@en . a owl:Class; rdfs:subClassOf ; ; "The number of different species that are represented in a given community, weighted by their abundance. Community species diversity can be calculated in different ways, but consists of two components: species richness and species evenness."@en; "If your metric does not include the abundances of different species, but rather just the numer of species, you should use community species richness (PCO_0000010). More specific subclasses or instances of this class may be created to describe specific ways of measuring diversity."; "adapted from http://en.wikipedia.org/wiki/Species_diversity"; ; rdfs:comment "The Shannon Index and Simpson Index are examples of ways in which species diversity is quantified."@en; rdfs:label "community species diversity"@en . a owl:Class; rdfs:subClassOf ; "If there are 40 foxes, and 1000 dogs, the community is not very even, but if there are 40 foxes and 42 dogs, the community is quite even."@en; ; "A quality of an ecological community that reflects how close in abundance all species in a community are."@en; "adapted from http://en.wikipedia.org/wiki/Species_evenness"@en; ; rdfs:label "community species evenness"@en . a owl:Class; rdfs:subClassOf ; ; "A community species diversity metric that accounts for both the abundance and evenness of the species present quantified via the following formula: the negative sum of, the product of the proportion of species i relative to the total number of species (pi) multiplied by the natural logarithm of this proportion (ln pi)."; , ; ; "Shannon entropy", "Shannon's diversity index", "Shannon-Wiener index"; rdfs:label "Shannon diversity index"@en . a owl:Class; rdfs:subClassOf ; ; "A community species diversity metric that is quantified via the following formula: the reciprocal of the sum of squared proportion of species i relative to the total number of species (pi)."; , ; ; "Simpson index"; rdfs:label "Simpson diversity index"@en . a owl:Class; rdfs:subClassOf ; ; "A community species diversity metric that is quantified via the following formula: the sum of squared proportion of species i relative to the total number of species (pi)."; , ; ; rdfs:label "inverse Simpson diversity index"@en . a owl:Class; rdfs:subClassOf ; "A community species diversity that is the mean species diversity at a site or within a specific habitat."; ; ; ; "α-diversity"; rdfs:label "alpha diversity"@en . a owl:Class; rdfs:subClassOf ; "A community species diversity that is the ratio between regional and local species diversity."; ; ; ; "true beta diversity", "β-diversity"; rdfs:label "beta diversity"@en . a owl:Class; rdfs:subClassOf ; "A community species diversity that is the total species diversity in a landscape. The area or landscape of interest may be of very different sizes in different situations, but it should encompass multiple sites or habitats as measured by alpha diversity."; ; ; ; "γ-diversity"; rdfs:label "gamma diversity"@en . a owl:Class; rdfs:subClassOf ; "TBD: add logical definition"; , , "The density of plants in an ecological community or population, often measured as the number of plants per area."; ; rdfs:label "plant density"@en . a owl:Class; rdfs:subClassOf ; "The density of seedlings in an ecological community or population, often measured as the number of seedlings per area."; "TBD: add logical definition"; , ; ; rdfs:label "seedling density"@en . a owl:Class; rdfs:subClassOf , ; "The density of plants in an ecological community (multiple species), often measured as the number of plants per area."; "TBD: add logical definition"; , ; ; rdfs:label "plant density of an ecological community"@en . a owl:Class; rdfs:subClassOf , ; "The density of seedlings in an ecological community (multiple species), often measured as the number of plants per area."; "TBD: add logical definition"; , ; ; rdfs:label "seedling density of an ecological community"@en . a owl:Class; rdfs:subClassOf ; "protein"; "antithrombin III is a protein"; "An amino acid chain that is produced de novo by ribosome-mediated translation of a genetically-encoded mRNA."; , ; "protein"; "PR:000000001"; rdfs:comment "Proteins descended from a common ancestor can be classified into families and superfamilies composed of products of evolutionarily-related genes. The domain architecture of a protein is described by the order of its constituent domains. Proteins with the same domains in the same order are defined as homeomorphic [PRO:WCB]."; rdfs:label "protein" . a owl:Class; rdfs:subClassOf ; "A material entity consisting of multiple components that are causally integrated."; "May be replaced by a BFO class, as discussed in http://www.jbiomedsem.com/content/4/1/43"; "Chris Mungall"; "http://www.jbiomedsem.com/content/4/1/43"; ; rdfs:label "system" . a owl:Class; rdfs:subClassOf ; "region"; "A sequence_feature with an extent greater than zero. A nucleotide region is composed of bases and a polypeptide region is composed of amino acids."; "primary structure of sequence macromolecule", "sequence"; , ; rdfs:label "region" . a owl:Class; rdfs:subClassOf ; "Any portion of the organ that covers that body and consists of a layer of epidermis and a layer of dermis."; "Note the distinction between the entire skin of the body, of which there is only 1 in an organism, and zones of skin, of which there can be many. Examples: skin of knee"; ; "(...) it is well-established that neural crest cells contribute to both the dermal skeleton (craniofacial bone, teeth, and the caudal fin rays of teleosts) and the integument, including craniofacial dermis and all pigment cells outside the retina (...).[well established][VHOG]"; "we assume that mouse, HOG and GAID all mean zone of skin when they say skin. We also choose skin as an exact synonym, as it is more intuitive"; , , "EHDAA2:0001844", "EHDAA:6530", "EMAPA:17525", "EV:0100152", "FMA:86166", "GAID:933", "MA:0000151", "MAT:0000284", "MESH:D012867", "MIAA:0000284", "OpenCyc:Mx4rvVjX3ZwpEbGdrcN5Y29ycA", "VHOG:0000860"; "portion of skin", "region of skin", "skin", "skin region", "skin zone"; "uberon"; "UBERON:0000014"; ; rdfs:label "zone of skin"; "http://upload.wikimedia.org/wikipedia/commons/6/6d/Skin.svg"^^xsd:anyURI, "http://upload.wikimedia.org/wikipedia/commons/e/e8/HumanSkinDiagram.jpg"^^xsd:anyURI . a owl:Class; rdfs:subClassOf , ; "A subdivision of the digestive tract that connects the small intestine to the cloaca or anus. Lacks or has few villi[Kardong]."; ; "Intestinal surface area also is increased in amphibians and reptiles by internal folds and occasionally by a few villi. The intestine can be divided into a small intestine and a slightly wider large intestine.[well established][VHOG]"; , , , "AAO:0010396", "BTO:0000706", "CALOHA:TS-1306", "EFO:0000840", "EMAPA:19252", "EV:0100077", "FMA:7201", "GAID:306", "MA:0000333", "MESH:A03.492.411.495", "MIAA:0000046", "NCIT:C12379", "OpenCyc:Mx4rvVkF5pwpEbGdrcN5Y29ycA", "UMLS:C0021851", "VHOG:0000054", "XAO:0000131", "galen:LargeIntestine"; "uberon"; "intestinum crassum"; "UBERON:0000059"; , , , ; rdfs:label "large intestine" . a owl:Class; rdfs:subClassOf ; "Material anatomical entity that is a single connected structure with inherent 3D shape generated by coordinated expression of the organism's own genome."; ; , , "AAO:0010825", "AEO:0000003", "BILA:0000003", "CARO:0000003", "EHDAA2:0003003", "EMAPA:0", "FBbt:00007001", "FMA:305751", "FMA:67135", "GAID:781", "HAO:0000003", "MA:0003000", "MESH:D000825", "TAO:0000037", "TGMA:0001823", "VHOG:0001759", "XAO:0003000", "ZFA:0000037"; "biological structure", "connected biological structure"; "uberon"; "UBERON:0000061"; ; rdfs:label "anatomical structure" . a owl:Class; rdfs:subClassOf ; "Anatomical structure that performs a specific function or group of functions [WP]."; ; "Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions."; "CARO v1 does not include a generic 'organ' class, only simple and compound organ. CARO v2 may include organ, see https://github.com/obophenotype/caro/issues/4"; , , , "BIRNLEX:4", "CARO:0020004", "EFO:0000634", "EMAPA:35949", "ENVO:01000162", "FMA:67498", "MA:0003001", "NCIT:C13018", "OpenCyc:Mx4rv5XMb5wpEbGdrcN5Y29ycA", "OpenCyc:Mx4rwP3iWpwpEbGdrcN5Y29ycA", "UMLS:C0178784", "WBbt:0003760"; "uberon"; "anatomical unit", "body organ", "element"; "UBERON:0000062"; ; rdfs:label "organ" . a owl:Class; rdfs:subClassOf ; "A multicellular structure that is a part of an organ."; "currently defined in a very broad sense, may be replaced by more specific classes in the future"; ; , , "AAO:0011124", "BIRNLEX:16", "EFO:0000635", "FMA:82472"; "cardinal organ part"; "uberon"; "regional part of organ"; "UBERON:0000064"; , , ; rdfs:label "organ part" . a owl:Class; rdfs:subClassOf ; "Segment of the alimentary canal extending from the stomach to the anus and, in humans and other mammals, consists of two segments, the small intestine and the large intestine."; "This class is probably too inclusive"; ; "Portion of the alimentary canal bounded anteriorly by the pyloric sphincter and posteriorly by the cloacal sphincter.[AAO]", "The tract of the alimentary canal. [Dorian_AF, Elsevier's_encyclopaedic_dictionary_of_medicine, Part_B:_Anatomy_(1988)_Amsterdam_etc.:_Elsevier][VHOG]"; "intestinal"; "In zebrafish, No stomach, small intestine, or large intestine can be distinguished. However, differences can be found in the morphology of the mucosa columnar epithelial cells and the number of goblet cells, suggesting functional differentiation. The intestine has numerous folds that become progressively shorter in a rostral-to-caudal direction. Proportionally, these folds are significantly larger than the finger-like intestinal villi of mammals and other amniotes (Wallace et al. 2005). Columnar-shaped absorptive enterocytes are the most numerous in the zebrafish intestinal epithelium. Goblet cells are the second most populous epithelial cell type."; , , , "AAO:0000246", "ANISEED:1235303", "BSA:0000093", "BTO:0000648", "CALOHA:TS-0490", "EFO:0000834", "EMAPA:32874", "EV:0100071", "FMA:7199", "GAID:295", "MA:0000328", "MA:0001524", "MESH:A03.492.411", "MIAA:0000043", "NCIT:C12736", "TAO:0001338", "UMLS:C0021853", "VHOG:0000056", "WBbt:0005772", "XAO:0000129", "ZFA:0001338", "galen:Intestine"; "bowel"; "uberon"; "intestinal tract"; "UBERON:0000160"; , , , ; rdfs:label "intestine" . a owl:Class; rdfs:subClassOf ; "The proximal portion of the digestive tract, containing the oral cavity and bounded by the oral opening. In vertebrates, this extends to the pharynx and includes gums, lips, tongue and parts of the palate. Typically also includes the teeth, except where these occur elsewhere (e.g. pharyngeal jaws) or protrude from the mouth (tusks)."; ; "Cavity in which food is initially ingested and generally contains teeth, tongue and glands.[AAO]"; "Molecular and developmental cell lineage data suggest that the acoel mouth opening is homologous to the mouth of protostomes and deuterostomes and that the last common ancestor of the Bilateria (the 'urbilaterian') had only this single digestive opening.[well established][VHOG]"; "oral"; "some AOs place this as developing from the stomodeum but we weaken this to developmental contribution, as the mouth includes non-ectodermal derivatives"; "in FMA, the tongue, palate etc are part of the mouth which is itself a subdivision of the face. ZFA includes a separate class 'oral region' which is part of the mouth, but excludes tongue and lips"; , , , "AAO:0010355", "BTO:0001090", "BTO:0004698", "CALOHA:TS-1315", "EFO:0000825", "EHDAA2:0001326", "EHDAA:542", "EMAPA:16262", "FBbt:00003126", "FMA:49184", "GAID:75", "MA:0000341", "MA:0002474", "MAT:0000038", "MESH:D009055", "MIAA:0000038", "OpenCyc:Mx4rvVidh5wpEbGdrcN5Y29ycA", "TADS:0000040", "TAO:0000547", "TAO:0000590", "TGMA:0000131", "VHOG:0000280", "VHOG:0000812", "XAO:0003029", "ZFA:0000547", "ZFA:0000590", "galen:Mouth"; "regio oralis"; "adult mouth"; "uberon"; "cavital oralis", "cavitas oris", "cavum oris", "mouth cavity", "oral region", "oral vestibule", "rima oris", "stoma", "stomatodaeum", "trophic apparatus", "vestibule of mouth", "vestibulum oris"; "UBERON:0000165"; , , , , ; rdfs:label "mouth"; rdfs:seeAlso "https://github.com/obophenotype/uberon/issues/661"^^xsd:anyURI; "http://upload.wikimedia.org/wikipedia/commons/0/06/Mouth_illustration-Otis_Archives.jpg"^^xsd:anyURI . a owl:Class; rdfs:subClassOf ; "Anatomical cavity at the start of the digestive tract that that is enclosed by the mouth. The boundaries and contents vary depending on the species. In vertebrates, the boundaries are the oral opening, the cheeks, the palate and (if present) the palatoglossal arch - if this is not present then the mouth and pharynx form the oropharyngeal cavity. The buccal cavity contains the teeth, tongue and palate (when present)"; ; "Anatomical cavity bounded anteriorly by the mouth and posteriorly by the derivatives of the branchial arches.[AAO]", "The cavity of the mouth, bounded by the jaw bones and associated structures (muscles and mucosa). [TFD][VHOG]"; "Echinoderms, hemichordates, and chordates are called deuterostomes because the mouth arises not from the blastopore but from a second invagination at the anterior end of the larva that pushes in to connect with the archenteron.[well established][VHOG]"; , , "AAO:0000053", "AAO:0000960", "BSA:0000107", "CALOHA:TS-1315", "EFO:0001975", "EHDAA2:0001324", "EHDAA:6970", "EMAPA:17411", "EMAPA:18399", "EV:0100057", "FMA:20292", "HAO:0000669", "NCIT:C12421", "TAO:0001027", "TGMA:0000102", "UMLS:C0226896", "VHOG:0000188", "WBbt:0005255", "XAO:0000126", "ZFA:0001027"; "buccal cavity", "cavity of mouth"; "uberon"; "bucca"; "UBERON:0000167"; , , ; rdfs:label "oral cavity" . a owl:Class; rdfs:subClassOf ; "A portion of organism substance that is the product of an excretion process that will be eliminated from the body. An excretion process is elimination by an organism of the waste products that arise as a result of metabolic activity"; ; "UBERON:0000324", "UBERON:0007550"; "AEO:0000184", "BTO:0000491", "EHDAA2_RETIRED:0003184", "ENVO:02000022", "FMA:9674", "galen:Excretion"; "excreted substance", "portion of excreted substance", "waste substance"; "uberon"; "excretion"; "UBERON:0000174"; rdfs:label "excreta" . a owl:Class; rdfs:subClassOf ; "material anatomical entity"; "Anatomical entity that has mass."; , , ; , ; "AAO:0010264", "AEO:0000006", "BILA:0000006", "CARO:0000006", "EHDAA2:0003006", "FBbt:00007016", "FMA:67165", "HAO:0000006", "TAO:0001836", "TGMA:0001826", "VHOG:0001721"; "uberon"; "UBERON:0000465"; , , , ; rdfs:label "material anatomical entity" . a owl:Class; rdfs:subClassOf ; "anatomical cluster"; "Anatomical group that has its parts adjacent to one another."; , ; rdfs:label "anatomical cluster" . a owl:Class; rdfs:subClassOf , ; "An expanded region of the vertebrate alimentary tract that serves as a food storage compartment and digestive organ. A stomach is lined, in whole or in part by a glandular epithelium."; ; "Portion of alimentary canal with increased circular and longitudinal smooth muscle. Bounded posteriorly by the pyloric sphincter. Mucosal lining has increased folding.[AAO]"; "It appears that the stomach has an ancient origin. The stomach first appears in the fish lineage. The prevertebrate chordates do not have a true stomach, whereas the cartilaginous and bony fish do. Although most fish do have a true stomach, some fish species appear to have lost the stomach secondarily. The remaining vertebrate lineages do have a true stomach (at least in the adult animal), although there is great variation in the size and shape of the stomach.[well established][VHOG]"; "We restrict this to the vertebrate specific structure - see the grouping class 'food storage organ' for analogous structures in other species. Teleosts: Zebrafish is functionally stomach-less, but may retain ontogenic footprint. Although the precise shape and size of the stomach varies widely among different vertebrates, the relative positions of the oesophageal and duodenal openings remain relatively constant. As a result, the organ always curves somewhat to the left before curving back to meet the pyloric sphincter. However, lampreys, hagfishes, chimaeras, lungfishes, and some teleost fish have no stomach at all, with the oesophagus opening directly into the intestine. The gastric lining is usually divided into two regions, an anterior portion lined by fundic glands, and a posterior with pyloric glands. Cardiac glands are unique to mammals, and even then are absent in a number of species. The distributions of these glands vary between species, and do not always correspond with the same regions as in man. Furthermore, in many non-human mammals, a portion of the stomach anterior to the cardiac glands is lined with epithelium essentially identical to that of the oesophagus. Ruminants, in particular, have a complex stomach, the first three chambers of which are all lined with oesophageal mucosa"; , , , "AAO:0000579", "ANISEED:1235297", "BTO:0001307", "CALOHA:TS-0980", "EFO:0000837", "EHDAA2:0001915", "EHDAA:2993", "EMAPA:17021", "EV:0100070", "FMA:7148", "GAID:293", "MA:0000353", "MAT:0000051", "MESH:A03.492.766", "MIAA:0000051", "NCIT:C12391", "OpenCyc:Mx4rvVjlqpwpEbGdrcN5Y29ycA", "TAO:0002121", "UMLS:C0038351", "VHOG:0000408", "XAO:0000128", "galen:Stomach"; "stomach chamber"; "uberon"; "anterior intestine", "gaster", "mesenteron", "ventriculus"; "UBERON:0000945"; , , , , , ; rdfs:label "stomach"; "Stomach:diagram.svg"^^xsd:anyURI . a owl:Class; rdfs:subClassOf ; "An airway through which respiratory air passes in organisms."; "This class generically groups trachea and analagous structures throughout metazoa. Consider renaming, as the term could be taken to mean lumen of tracheal system (e.g. in SNOMED). As a grouping class this is quite vague, as it is not clear where the airway begins and ends"; ; "airway", "airways"; , , "FMA:265130"; "uberon"; "UBERON:0001005"; , ; rdfs:label "respiratory airway" . a owl:Class; rdfs:subClassOf ; "Anatomical system that has as its parts the organs devoted to the ingestion, digestion, and assimilation of food and the discharge of residual wastes."; ; "An anatomical system consisting of the alimentary canal and digestive glands responsible for intake, absorption, digestion and excretion of food.[AAO]"; "digestive"; "many anatomy ontologies consider gastrointestinal system synonymous with digestive system. here we follow MA in dividing digestive system into gastrointestinal and hepatobiliary. hepatobiliary includes the liver and biliary tract. species-specific AO classes are categorized according to whether liver is included. For example, XAO includes liver as part of XAO:0000125 alimentary system, so we assume this class is the more generic class"; , , "AAO:0000129", "BILA:0000082", "BTO:0000058", "CALOHA:TS-1293", "EFO:0000793", "EV:0100056", "FBbt:00005055", "FMA:7152", "GAID:278", "MA:0002431", "MAT:0000018", "MESH:D004064", "MIAA:0000018", "TADS:0000170", "TAO:0000339", "WBbt:0005748", "XAO:0000125", "ZFA:0000339", "galen:DigestiveSystem", "ncithesaurus:Digestive_System"; "uberon"; "alimentary system", "alimentary tract", "gastrointestinal system", "gut"; "UBERON:0001007"; , , , ; rdfs:label "digestive system" . a owl:Class; owl:equivalentClass _:449020; rdfs:subClassOf ; "Biological entity that is either an individual member of a biological species or constitutes the structural organization of an individual member of a biological species."; , ; , ; , "AAO:0010841", "AEO:0000000", "BFO:0000004", "BILA:0000000", "BIRNLEX:6", "CARO:0000000", "EHDAA2:0002229", "FBbt:10000000", "FBbt_root:00000000", "FMA:62955", "HAO:0000000", "MA:0000001", "NCIT:C12219", "TAO:0100000", "TGMA:0001822", "UMLS:C1515976", "WBbt:0000100", "XAO:0000000", "ZFA:0100000"; "uberon"; "UBERON:0001062"; , , , ; rdfs:label "anatomical entity" . _:449020 a owl:Restriction; owl:onProperty ; owl:hasSelf true . a owl:Class; rdfs:subClassOf ; "Excretion that is the output of a kidney"; ; "kidney excreta from some taxa (e.g. in aves) may not be liquid"; , , "BTO:0001419", "CALOHA:TS-1092", "EFO:0001939", "EMAPA:36554", "ENVO:00002047", "FMA:12274", "GAID:1189", "MA:0002545", "MAT:0000058", "MESH:D014556", "MIAA:0000058", "NCIT:C13283", "OpenCyc:Mx4rvVjGppwpEbGdrcN5Y29ycA", "UMLS:C0042036", "galen:Urine"; "uberon"; "UBERON:0001088"; , , ; rdfs:label "urine" . a owl:Class; rdfs:subClassOf ; "Portion of semisolid bodily waste discharged through the anus[MW,modified]"; ; "Excretion in semisolid state processed by the intestine.[FMA]"; "fecal"; "excreta"; , , "BTO:0000440", "CALOHA:TS-2345", "ENVO:00002003", "FMA:64183", "GAID:1199", "MA:0002509", "MAT:0000053", "MESH:D005243", "MIAA:0000053", "NCIT:C13234", "OpenCyc:Mx4rvVjJMZwpEbGdrcN5Y29ycA", "UMLS:C0015733", "galen:Feces"; "faeces", "fecal material", "fecal matter", "matières fécales@fr", "merde@fr", "partie de la merde@fr", "piece of shit", "porción de mierda@es", "portion of excrement", "portion of faeces", "portion of fecal material", "portion of fecal matter", "portion of feces", "portionem cacas", "stool", "teil der fäkalien@de"; "cow dung", "cow pat", "dung", "fewmet", "frass", "guano", "portion of dung", "portion of guano", "portion of scat", "scat", "spraint"; "uberon"; "droppings", "excrement", "ordure", "spoor"; "UBERON:0001988"; , ; rdfs:label "feces" . a owl:Class; rdfs:subClassOf ; "Respiration organ that develops as an outpocketing of the esophagus."; ; "Either of two organs which allow gas exchange absorbing oxygen from inhaled air and releasing carbon dioxide with exhaled air.[AAO]"; "Lungs had already developed as paired ventral pockets from the intestine in the ancestor of Osteognathostomata. (...) In actinopterygian fishes, apart from Cladistia, the ventral intestinal pocket migrates dorsally and becomes the swim-bladder, a mainly hydrostatical organ (reference 1); Comparative transcriptome analyses indicate molecular homology of zebrafish swimbladder and Mammalian lung (reference 2).[well established][VHOG]"; "pulmonary"; "respiration organ in all air-breathing animals, including most tetrapods, a few fish and a few snails. In mammals and the more complex life forms, the two lungs are located in the chest on either side of the heart. Their principal function is to transport oxygen from the atmosphere into the bloodstream, and to release carbon dioxide from the bloodstream into the atmosphere. This exchange of gases is accomplished in the mosaic of specialized cells that form millions of tiny, exceptionally thin-walled air sacs called alveoli. // Avian lungs do not have alveoli as mammalian lungs do, they have Faveolar lungs. They contain millions of tiny passages known as para-bronchi, connected at both ends by the dorsobronchi"; , , , "AAO:0000275", "AAO:0010567", "BTO:0000763", "CALOHA:TS-0568", "EFO:0000934", "EHDAA2:0001042", "EHDAA:1554", "EHDAA:2205", "EMAPA:16728", "EV:0100042", "FMA:7195", "GAID:345", "MA:0000415", "MAT:0000135", "MESH:D008168", "MIAA:0000135", "NCIT:C12468", "OpenCyc:Mx4rvVjKy5wpEbGdrcN5Y29ycA", "UMLS:C0024109", "VHOG:0000310", "XAO:0000119", "galen:Lung"; "pulmo"; "uberon"; "UBERON:0002048"; , , , , ; rdfs:comment "Snakes and limbless lizards typically possess only the right lung as a major respiratory organ; the left lung is greatly reduced, or even absent. Amphisbaenians, however, have the opposite arrangement, with a major left lung, and a reduced or absent right lung [WP]"; rdfs:label "lung"; rdfs:seeAlso "https://github.com/obophenotype/uberon/issues/701"^^xsd:anyURI . a owl:Class; rdfs:subClassOf , ; "Subdivision of digestive tract that connects the stomach to the large intestine and is where much of the digestion and absorption of food takes place (with the exception of ruminants). The mammalian small intestine is long and coiled and can be differentiated histologically into: duodenum, jejunem, ileum[WP,cjm,Kardong]."; ; "The terminal region of the mid intestine is comprised of specialized enterocytes that appear to play a role in mucosal immunity. Wallace et al, 2005.[TAO]"; "Intestinal surface area also is increased in amphibians and reptiles by internal folds and occasionally by a few villi. The intestine can be divided into a small intestine and a slightly wider large intestine.[well established][VHOG]"; , , , "AAO:0010397", "BTO:0000651", "CALOHA:TS-0942", "EFO:0000841", "EMAPA:32834", "EV:0100072", "FMA:7200", "GAID:313", "MA:0000337", "MAT:0000047", "MESH:A03.492.411.620", "MIAA:0000047", "NCIT:C12386", "OpenCyc:Mx4rvVjlIJwpEbGdrcN5Y29ycA", "TAO:0001323", "UMLS:C0021852", "VHOG:0000055", "XAO:0000130", "ZFA:0001323", "galen:SmallIntestine"; "small bowel", "small intestine"; "uberon"; "anterior intestine", "intestinum tenue", "mid intestine"; "UBERON:0002108"; , , , , , ; rdfs:label "small intestine"; "http://upload.wikimedia.org/wikipedia/commons/8/82/Stomach_colon_rectum_diagram.svg"^^xsd:anyURI . a owl:Class; rdfs:subClassOf ; "The region of the digestive tract extending from the beginning of the intestines to the anus[GO - gut definition]."; ; "MA class was moved from here. See https://github.com/obophenotype/uberon/issues/509", "WP: small intestine, large intestine, anus. Anal canal not part of LGIT according to FMA, but anus is considered part of LGIT according to WP. Duodenum overlaps both U/L"; "gut"; , , , "FMA:49179", "NCIT:C33010", "UMLS:C0226875", "galen:LowerGastrointestinalTract"; "lower GI tract", "lower gastrointestinal tract"; "uberon"; "UBERON:0004907"; ; rdfs:label "lower digestive tract" . a owl:Class; rdfs:subClassOf ; "The region of the digestive tract extending from the mouth cavity through pharynx esophagus stomach and duodenum."; ; "WP: small intestine, large intestine, anus. Anal canal not part of LGIT according to FMA, but anus is considered part of LGIT according to WP. Duodenum overlaps both U/L. In Galen, entire GI tract excludes esophagus"; , , , "FMA:49177", "NCIT:C33837", "UMLS:C0226874", "galen:UpperGastrointestinalTract"; "upper GI tract", "upper gastrointestinal tract"; "uberon"; "UBERON:0004908"; ; rdfs:label "upper digestive tract" . a owl:Class; rdfs:subClassOf ; "A proximal-distal subdivision of the digestive tract."; "intended to denote both embryonic and adult structures. Note the FMA grouping here is not quite correct."; ; "FBbt:00100315", "FMA:71131"; "uberon"; "alimentary system subdivision", "intestinal tract", "segment of intestinal tract", "subdivision of alimentary system"; "UBERON:0004921"; ; rdfs:label "subdivision of digestive tract" . a owl:Class; rdfs:subClassOf ; "An anatomical structure that has more than one cell as a part."; ; "CARO:0010000", "FBbt:00100313"; "multicellular structure"; "uberon"; "UBERON:0010000"; ; rdfs:label "multicellular anatomical structure" . a owl:Class; rdfs:subClassOf ; "Any of the organs or elements that are part of the digestive system. Examples: tongue, esophagus, spleen, crop, lunge feeding organ, tooth elements."; ; , "EMAPA:37843"; "digestive organ", "digestive system organ"; "uberon"; "UBERON:0013765"; , ; rdfs:label "digestive system element" . a owl:Class; rdfs:subClassOf ; "time unit"; "A unit which is a standard measure of the dimension in which events occur in sequence."; , ; rdfs:label "time unit" . a owl:Class; rdfs:subClassOf , ; ; rdfs:label "phenotype"@en . a owl:Class; rdfs:subClassOf ; ; rdfs:label "abnormal phenotype"@en . owl:Thing a owl:Class; . a owl:NamedIndividual, ; "example to be eventually removed"@en; rdfs:label "example to be eventually removed"@en . a owl:NamedIndividual, ; "failed exploratory term"@en; "The term was initially used in an attempt to structure part of the ontology, but in retrospect failed to do a good job."@en; "Terms created as placeholders with the expectation of being permanent should instead be deprecated using the \"placeholder removed\" (obo:IAO_0000226) justification."@en; "Person:Alan Ruttenberg"@en; , ; rdfs:label "failed exploratory term"@en . a owl:Thing, owl:NamedIndividual, ; "metadata complete"@en; "Class has all its metadata, but is either not guaranteed to be in its final location in the asserted IS_A hierarchy or refers to another class that is not complete."@en; rdfs:label "metadata complete"@en . a owl:Thing, owl:NamedIndividual, ; "organizational term"@en; "The term was created to ease viewing/sorting terms for development purposes, but will not be included in a release."@en, "term created to ease viewing/sort terms for development purpose, and will not be included in a release"@en; "PERSON:Alan Ruttenberg"; rdfs:label "organizational term"@en . a owl:Thing, owl:NamedIndividual, ; "ready for release"@en; ; "Class has undergone final review, is ready for use, and will be included in the next release. Any class lacking \"ready_for_release\" should be considered likely to change place in hierarchy, have its definition refined, or be obsoleted in the next release. Those classes deemed \"ready_for_release\" will also derived from a chain of ancestor classes that are also \"ready_for_release.\""@en; rdfs:label "ready for release"@en . a owl:Thing, owl:NamedIndividual, ; "metadata incomplete"@en; "Class is being worked on; however, the metadata (including definition) are not complete or sufficiently clear to the branch editors."@en; rdfs:label "metadata incomplete"@en . a owl:Thing, owl:NamedIndividual, ; "uncurated"@en; "Nothing done yet beyond assigning a unique class ID and proposing a preferred term."@en; rdfs:label "uncurated"@en . a owl:Thing, owl:NamedIndividual, ; "pending final vetting"@en; ; "All definitions, placement in the asserted IS_A hierarchy and required minimal metadata are complete. The class is awaiting a final review by someone other than the term editor."@en; rdfs:label "pending final vetting"@en . a owl:NamedIndividual; "Core is an instance of a grouping of terms from an ontology or ontologies. It is used by the ontology to identify main classes."@en; "PERSON: Alan Ruttenberg"@en, "PERSON: Melanie Courtot"@en; ; rdfs:label "obsolete_core"@en; owl:deprecated true . a owl:NamedIndividual, ; "placeholder removed"@en; "The term was created to temporarily stand in for a semantic purpose, but is no longer needed, typically due to another permanent term being defined."@en; "This reason is appropriate for a temporary term even if no permanent term is defined; for example if the need for the term no longer exists. If a permanent (replacement) term is defined, the deprecated term should reference the replacement with IAO:0100001. If no replacement is defined, it may be appropriate to reference alternative terms with oboInOwl:consider."@en; , ; rdfs:label "placeholder removed"@en . a owl:NamedIndividual, ; "terms merged"@en; "The term has been combined with one or more other terms to create a more encompassing (merged) term."@en; "The deprecated term should reference the merged term with obo:IAO_0100001. The replacement term should reference the original terms as sources using obo:RO_0001000 (derives_from). An editor note should explain what were the merged terms and the reason for the merge."@en; , ; rdfs:label "terms merged"@en . a owl:NamedIndividual, ; "term imported"@en; "The term has been replaced by a term imported from another ontology."@en; "This is to be used when the original term has been replaced by a term imported from an other ontology. The deprecated term should reference the imported term with obo:IAO_0100001."@en; , ; rdfs:label "term imported"@en . a owl:NamedIndividual, ; "term split"@en; "The term has been split into two or more new terms."@en; "This is to be used when a term has been split in two or more new terms. An editor note should indicate the reason for the split. The deprecated term should reference the replacement terms with obo:IAO_0100001."@en; , ; rdfs:label "term split"@en . a owl:NamedIndividual, ; "universal"@en; "Hard to give a definition for. Intuitively a \"natural kind\" rather than a collection of any old things, which a class is able to be, formally. At the meta level, universals are defined as positives, are disjoint with their siblings, have single asserted parents."@en; "Alan Ruttenberg"@en; "A Formal Theory of Substances, Qualities, and Universals, http://ontology.buffalo.edu/bfo/SQU.pdf"@en; rdfs:label "universal"@en . a owl:NamedIndividual, ; "defined class"@en; "A defined class is a class that is defined by a set of logically necessary and sufficient conditions but is not a universal"@en; "\"definitions\", in some readings, always are given by necessary and sufficient conditions. So one must be careful (and this is difficult sometimes) to distinguish between defined classes and universal."@en; "Alan Ruttenberg"@en; rdfs:label "defined class"@en . a owl:NamedIndividual, ; "named class expression"@en; "A named class expression is a logical expression that is given a name. The name can be used in place of the expression."@en; "named class expressions are used in order to have more concise logical definition but their extensions may not be interesting classes on their own. In languages such as OWL, with no provisions for macros, these show up as actuall classes. Tools may with to not show them as such, and to replace uses of the macros with their expansions"@en; "Alan Ruttenberg"@en; rdfs:label "named class expression"@en . a owl:NamedIndividual, ; "to be replaced with external ontology term"@en; "Terms with this status should eventually replaced with a term from another ontology."@en; "Alan Ruttenberg"@en; "group:OBI"@en; rdfs:label "to be replaced with external ontology term"@en . a owl:NamedIndividual, ; "requires discussion"@en; ; "A term that is metadata complete, has been reviewed, and problems have been identified that require discussion before release. Such a term requires editor note(s) to identify the outstanding issues."@en; "Alan Ruttenberg"@en; "group:OBI"@en; rdfs:label "requires discussion"@en . a owl:NamedIndividual, ; "The term was added to the ontology on the assumption it was in scope, but it turned out later that it was not."@en; "This obsolesence reason should be used conservatively. Typical valid examples in disease ontologies are: unnecessary class grouping; mistaked creation of a disease associated to a phenotype."@en; ; "https://github.com/information-artifact-ontology/ontology-metadata/issues/77"; "https://orcid.org/0000-0001-5208-3432"; , ; rdfs:label "out of scope" . a owl:NamedIndividual, ; "The term was added to the ontology on the assumption it was a valid domain entity, but it turns out the entity does not exist in reality."@en; "This obsolesence reason should be used conservatively. For example: Obsoleting class that describes a breed of cow based on a record in an existing database, that was later retracted as faulty (breed does not exist). Do not use this term to obsolete a historic concept (that was once valid, but not anymore). "@en; ; "https://github.com/information-artifact-ontology/ontology-metadata/issues/136"; "https://orcid.org/0000-0002-4142-7153"; rdfs:label "domain entity does not exist" . a owl:NamedIndividual; """## Elucidation This is used when the statement/axiom is assumed to hold true 'eternally' ## How to interpret (informal) First the "atemporal" FOL is derived from the OWL using the standard interpretation. This axiom is temporalized by embedding the axiom within a for-all-times quantified sentence. The t argument is added to all instantiation predicates and predicates that use this relation. ## Example Class: nucleus SubClassOf: part_of some cell forall t : forall n : instance_of(n,Nucleus,t) implies exists c : instance_of(c,Cell,t) part_of(n,c,t) ## Notes This interpretation is *not* the same as an at-all-times relation"""; rdfs:label "axiom holds for all times"@en . a owl:NamedIndividual . a owl:NamedIndividual; "en"; "Ontology for Biomedical Investigations"@en; "Advisors for this project come from the IFOMIS group, Saarbruecken and from the Co-ODE group in Manchester"@en; "Alan Ruttenberg"@en, "Allyson Lister"@en, "Barry Smith"@en, "Bill Bug"@en, "Bjoern Peters"@en, "Carlo Torniai"@en, "Chris Mungall"@en, "Chris Stoeckert"@en, "Chris Taylor"@en, "Christian Bolling"@en, "Cristian Cocos"@en, "Daniel Rubin"@en, "Daniel Schober"@en, "Dawn Field"@en, "Dirk Derom"@en, "Elisabetta Manduchi"@en, "Eric Deutsch"@en, "Frank Gibson"@en, "Gilberto Fragoso"@en, "Helen C. Causton"@en, "Helen Parkinson"@en, "Holger Stenzhorn"@en, "James A. Overton"@en, "James Malone"@en, "Jay Greenbaum"@en, "Jeffrey Grethe"@en, "Jennifer Fostel"@en, "Jessica Turner"@en, "Jie Zheng"@en, "Joe White"@en, "John Westbrook"@en, "Kevin Clancy"@en, "Larisa Soldatova"@en, "Lawrence Hunter"@en, "Liju Fan"@en, "Luisa Montecchi"@en, "Matthew Brush"@en, "Matthew Pocock"@en, "Melanie Courtot"@en, "Melissa Haendel"@en, "Mervi Heiskanen"@en, "Monnie McGee"@en, "Norman Morrison"@en, "Philip Lord"@en, "Philippe Rocca-Serra"@en, "Pierre Grenon"@en, "Richard Bruskiewich"@en, "Richard Scheuermann"@en, "Robert Stevens"@en, "Ryan R. Brinkman"@en, "Stefan Wiemann"@en, "Susanna-Assunta Sansone"@en, "Tanya Gray"@en, "Tina Hernandez-Boussard"@en, "Trish Whetzel"@en, "Yongqun He"@en; "2009-07-31"^^xsd:date; "The Ontology for Biomedical Investigations (OBI) is build in a collaborative, international effort and will serve as a resource for annotating biomedical investigations, including the study design, protocols and instrumentation used, the data generated and the types of analysis performed on the data. This ontology arose from the Functional Genomics Investigation Ontology (FuGO) and will contain both terms that are common to all biomedical investigations, including functional genomics investigations and those that are more domain specific."@en; "OWL-DL"@en; "An ontology for the annotation of biomedical and functional genomics experiments."@en; "http://creativecommons.org/licenses/by/4.0/"; rdfs:comment "Please cite the OBI consortium http://purl.obolibrary.org/obo/obi where traditional citation is called for. However it is adequate that individual terms be attributed simply by use of the identifying PURL for the term, in projects that refer to them."; owl:versionInfo "2018-08-27" . a owl:NamedIndividual; "Researcher ORCID=0000-0001-6677-8489"; rdfs:label "Aleix Puig-Barbé" . a owl:NamedIndividual; "researcher"; rdfs:label "David P Hill" . a owl:NamedIndividual; "American epidemiologist and ontologist"; rdfs:label "Melissa Haendel" . a owl:NamedIndividual; "researcher"; rdfs:label "Tanya Z Berardini" . a owl:NamedIndividual; "bioinformatics researcher"; rdfs:label "Christopher J. Mungall" . a owl:NamedIndividual; "researcher"; rdfs:label "David Osumi-Sutherland" . a owl:NamedIndividual; "researcher"; rdfs:label "Lauren E. Chan" . a owl:NamedIndividual; "researcher"; rdfs:label "James P. Balhoff" . a owl:NamedIndividual; "Canadian biocurator"; rdfs:label "Pascale Gaudet" . _:449030 . _:449040 . _:449050 . _:449060 . _:449070 . _:449080 . _:449090 . _:4490a0 . _:4490b0 . _:4490c0 . _:4490d0 . _:4490e0 . _:4490f0 . _:449100 . _:449110 . _:449120 . _:449130 . _:449140 . _:449150 . _:449160 . _:449170 . _:449180 . _:449190 . _:4491a0 . _:4491b0 . _:4491c0 . _:4491d0 . _:4491e0 . _:4491f0 . _:449200 . _:449210 . _:449220 . _:449230 . _:449240 . _:449250 . _:449260 . _:449270 . _:449280 . _:449290 . _:4492a0 . _:4492b0 . _:4492c0 . _:4492d0 . _:4492e0 . _:4492f0 . _:449300 . _:449310 . _:449320 . _:449330 . _:449340 . _:449350 . _:449360 . _:449370 . _:449380 . _:449390 . _:4493a0 . _:4493b0 . _:4493c0 . _:4493d0 . _:4493e0 . _:4493f0 . _:449400 . _:449410 . _:449420 . _:449430 . _:449440 . _:449450 . _:449460 owl:minQualifiedCardinality "2"^^xsd:nonNegativeInteger . _:449470 owl:minQualifiedCardinality "2"^^xsd:nonNegativeInteger . _:449480 owl:minQualifiedCardinality "2"^^xsd:nonNegativeInteger . "The OBO Relations Ontology (RO) is a collection of OWL relations (ObjectProperties) intended for use across a wide variety of biological ontologies."@en; ; "OBO Relations Ontology"@en; owl:versionInfo "2025-12-17"; " https://github.com/oborel/obo-relations/"^^xsd:anyURI . _:449490 a owl:AllDifferent; owl:distinctMembers _:4494a0 . _:4494a0 rdf:first ; rdf:rest _:4494b0 . _:4494b0 rdf:first ; rdf:rest _:4494c0 . _:4494c0 rdf:first ; rdf:rest _:4494d0 . _:4494d0 rdf:first ; rdf:rest _:4494e0 . _:4494e0 rdf:first ; rdf:rest _:4494f0 . _:4494f0 rdf:first ; rdf:rest _:449500 . _:449500 rdf:first ; rdf:rest _:449510 . _:449510 rdf:first ; rdf:rest rdf:nil . _:449520 a owl:AllDifferent; owl:distinctMembers _:449530 . _:449530 rdf:first ; rdf:rest _:449540 . _:449540 rdf:first ; rdf:rest _:449550 . _:449550 rdf:first ; rdf:rest _:449560 . _:449560 rdf:first ; rdf:rest rdf:nil .