PREFIX obo:
PREFIX rdf:
PREFIX rdfs:
PREFIX xsd:
obo:IDO_0000619 a rdfs:Class ;
rdfs:label "immunosuppressive disposition"@en ;
rdfs:comment "A disposition whose realization negatively regulates an immune response."@en ;
rdfs:subClassOf obo:BFO_0000016 .
obo:RO_0000052 a rdf:Property ;
rdfs:label "inheres in"@en ;
rdfs:comment "a relation between a specifically dependent continuant (the dependent) and an independent continuant (the bearer), in which the dependent specifically depends on the bearer for its existence"@en ;
rdfs:range .
obo:BFO_0000054 a rdf:Property ;
rdfs:label "realized in"@en ;
rdfs:comment "Paraphrase of elucidation: a relation between a realizable entity and a process, where there is some material entity that is bearer of the realizable entity and participates in the process, and the realizable entity comes to be realized in the course of the process" ;
rdfs:domain obo:BFO_0000017 ;
rdfs:range obo:IDO_0000610 , obo:BFO_0000015 , obo:IDO_0000495 , obo:TRANS_0000002 , obo:GO_0045087 , obo:GO_0044411 , obo:GO_0006955 , obo:GO_0002250 , obo:GO_0006959 , obo:TRANS_0000000 , obo:GO_0002443 , obo:IDO_0000656 , obo:GO_0044406 .
obo:RO_0000059 a rdf:Property ;
rdfs:label "concretizes"@en ;
rdfs:comment "A relationship between a specifically dependent continuant and a generically dependent continuant, in which the generically dependent continuant depends on some independent continuant in virtue of the fact that the specifically dependent continuant also depends on that same independent continuant. Multiple specifically dependent continuants can concretize the same generically dependent continuant."@en ;
rdfs:domain obo:BFO_0000020 ;
rdfs:range obo:BFO_0000031 .
obo:RO_0000056 a rdf:Property ;
rdfs:label "participates in"@en ;
rdfs:comment "a relation between a continuant and a process, in which the continuant is somehow involved in the process"@en ;
rdfs:domain obo:BFO_0000002 ;
rdfs:range obo:BFO_0000003 .
obo:IDO_0000426 a rdfs:Class ;
rdfs:label "toxin disposition"@en ;
rdfs:comment "A disposition to cause I) malfunction of cells, ii) damage to extracellular matrix, or iii) damage of cells to a degree that can result in cell death."@en ;
rdfs:subClassOf obo:BFO_0000016 .
obo:IDO_0000035 a rdfs:Class ;
rdfs:label "_obsolete_fusion protein"@en ;
rdfs:subClassOf .
obo:BFO_0000034 a rdfs:Class ;
rdfs:label "function"@en ;
rdfs:subClassOf obo:BFO_0000016 .
obo:RO_0000079 a rdf:Property ;
rdfs:label "function of"@en ;
rdfs:comment "a relation between a function and an independent continuant (the bearer), in which the function specifically depends on the bearer for its existence"@en ;
rdfs:domain obo:BFO_0000034 ;
rdfs:range ;
rdfs:subPropertyOf obo:RO_0000052 .
obo:BFO_0000017 a rdfs:Class ;
rdfs:label "realizable entity"@en ;
rdfs:comment "A specifically dependent continuant that inheres in continuant entities and are not exhibited in full at every time in which it inheres in an entity or group of entities. The exhibition or actualization of a realizable entity is a particular manifestation, functioning or process that occurs under certain circumstances."@en ;
rdfs:subClassOf obo:BFO_0000020 .
obo:IDO_0000072 a rdfs:Class ;
rdfs:label "_obsolete_disruption of body surface"@en ;
rdfs:subClassOf .
obo:IDO_0000411 a rdfs:Class ;
rdfs:label "paratenic host role"@en ;
rdfs:comment "A symbiont host role borne by an organism in virtue of the fact that its partner in symbiosis utilizes the host to undergo a developmental stage transition, but the host is not required for continuation of the partner's life cycle. "@en ;
rdfs:subClassOf obo:IDO_0000408 .
obo:IDO_0000436 a rdfs:Class ;
rdfs:label "infectious disease"@en ;
rdfs:comment "A disease whose physical basis is an infectious disorder."@en ;
rdfs:subClassOf obo:OGMS_0000031 .
obo:IDO_0000664 a rdf:Property ;
rdfs:label "has_material_basis_in" ;
rdfs:range obo:IDO_0000504 , obo:BFO_0000040 , obo:CL_0000738 .
obo:IDO_0000102 a rdfs:Class ;
rdfs:label "_obsolete_epidemiological spread of disease"@en ;
rdfs:subClassOf .
obo:IDO_0000585 a rdfs:Class ;
rdfs:label "collective pathogenic disposition"@en ;
rdfs:comment "A collective disposition to initiate processes that result in a disorder."@en ;
rdfs:subClassOf obo:IDO_0000455 .
obo:IDO_0000624 a rdfs:Class ;
rdfs:label "_obsolete_host range"@en ;
rdfs:comment "A generically dependent continuant that is the set of organism types whose instances have as one of their canonical dispositions, the disposition to bear the host role for a colony of a certain type."@en ;
rdfs:subClassOf .
obo:IDO_0000592 a rdfs:Class ;
rdfs:label "immune population"@en ;
rdfs:comment "An organism population whose members have acquired immunity to an infectious agent."@en ;
rdfs:subClassOf obo:IDO_0000509 .
obo:RO_0002002 a rdf:Property ;
rdfs:label "has 2D boundary"@en ;
rdfs:comment "a relation between a material entity and a 2D immaterial entity (the boundary), in which the boundary delimits the material entity"@en ;
rdfs:domain obo:BFO_0000040 ;
rdfs:range obo:BFO_0000141 .
obo:RO_0000087 a rdf:Property ;
rdfs:label "has role"@en ;
rdfs:comment "a relation between an independent continuant (the bearer) and a role, in which the role specifically depends on the bearer for its existence"@en ;
rdfs:domain obo:BFO_0000004 ;
rdfs:range obo:BFO_0000023 ;
rdfs:subPropertyOf obo:RO_0000053 .
obo:RO_0002215 a rdf:Property ;
rdfs:label "capable of"@en ;
rdfs:comment "A relation between a material entity (such as a cell) and a process, in which the material entity has the ability to carry out the process. " ;
rdfs:domain obo:BFO_0000004 ;
rdfs:range obo:BFO_0000015 .
obo:RO_0000085 a rdf:Property ;
rdfs:label "has function"@en ;
rdfs:comment "a relation between an independent continuant (the bearer) and a function, in which the function specifically depends on the bearer for its existence"@en ;
rdfs:domain obo:BFO_0000004 ;
rdfs:range obo:BFO_0000034 ;
rdfs:subPropertyOf obo:RO_0000053 .
obo:RO_0000091 a rdf:Property ;
rdfs:label "has disposition"@en ;
rdfs:comment "a relation between an independent continuant (the bearer) and a disposition, in which the disposition specifically depends on the bearer for its existence"@en ;
rdfs:domain obo:BFO_0000004 ;
rdfs:range obo:BFO_0000016 ;
rdfs:subPropertyOf obo:RO_0000053 .
obo:IDO_0000520 a rdfs:Class ;
rdfs:label "communicability period"@en ;
rdfs:comment "A continuous temporal interval during which an infectious agent host bears a contagiousness disposition."@en ;
rdfs:subClassOf obo:BFO_0000038 .
obo:RO_0000057 a rdf:Property ;
rdfs:label "has participant"@en ;
rdfs:comment "a relation between a process and a continuant, in which the continuant is somehow involved in the process"@en ;
rdfs:domain obo:BFO_0000003 ;
rdfs:range obo:BFO_0000002 .
obo:BFO_0000062 a rdf:Property ;
rdfs:label "preceded by"@en ;
rdfs:domain obo:BFO_0000003 ;
rdfs:range obo:BFO_0000003 .
obo:BFO_0000063 a rdf:Property ;
rdfs:label "precedes"@en ;
rdfs:domain obo:BFO_0000003 ;
rdfs:range obo:BFO_0000003 .
obo:BFO_0000066 a rdf:Property ;
rdfs:label "occurs in"@en ;
rdfs:comment "b occurs_in c =def b is a process and c is a material entity or immaterial entity& there exists a spatiotemporal region r and b occupies_spatiotemporal_region r.& forall(t) if b exists_at t then c exists_at t & there exist spatial regions s and s’ where & b spatially_projects_onto s at t& c is occupies_spatial_region s’ at t& s is a proper_continuant_part_of s’ at t"@en ;
rdfs:domain obo:BFO_0000003 ;
rdfs:range obo:BFO_0000004 .
obo:IDO_0000204 a rdfs:Class ;
rdfs:label "_obsolete_factor"@en ;
rdfs:comment "'Role played by portion of physical substance in a biological process'-ID[O]:0000204: Role played by portion of physical substance in a biological process"@en ;
rdfs:subClassOf .
obo:IDO_0000565 a rdfs:Class ;
rdfs:label "microbistatic"@en ;
rdfs:comment "A material entity with an antimicrobial disposition that is realized in a process of inhibiting the growth of microorganisms."@en ;
rdfs:subClassOf obo:BFO_0000040 , obo:IDO_0000558 .
obo:IDO_0000484 a rdfs:Class ;
rdfs:label "infection incidence rate"@en ;
rdfs:comment "A quality that inheres in an organism population and is the infection incidence proportion per unit time."@en ;
rdfs:subClassOf obo:BFO_0000019 .
obo:IDO_0000113 a rdfs:Class ;
rdfs:label "_obsolete_serum resistance"@en ;
rdfs:subClassOf .
obo:IDO_0000064 a rdfs:Class ;
rdfs:label "_obsolete_pathogen"@en ;
rdfs:subClassOf .
obo:IDO_0000046 a rdfs:Class ;
rdfs:label "_obsolete_sign"@en ;
rdfs:subClassOf .
obo:BFO_0000145 a rdfs:Class ;
rdfs:label "relational quality"@en ;
rdfs:comment "b is a relational quality = Def. for some independent continuants c, d and for some time t: b quality_of c at t & b quality_of d at t. (axiom label in BFO2 Reference: [057-001])"@en ;
rdfs:subClassOf obo:BFO_0000019 .
obo:IDO_0000512 a rdfs:Class ;
rdfs:label "diseased population"@en ;
rdfs:comment "An organism population in whose members an infectious disease is being realized."@en ;
rdfs:subClassOf obo:IDO_0000509 .
obo:IDO_0000118 a rdfs:Class ;
rdfs:label "_obsolete_pandemic spread of disease"@en ;
rdfs:subClassOf .
obo:IDO_0000222 a rdfs:Class ;
rdfs:label "_obsolete_infectious disease course"@en ;
rdfs:subClassOf .
obo:IDO_0000657 a rdfs:Class ;
rdfs:label "process that results in death" ;
rdfs:comment "A process that results in death." ;
rdfs:subClassOf obo:BFO_0000015 .
obo:RO_0002211 a rdf:Property ;
rdfs:label "regulates"@en ;
rdfs:comment "x regulates y if and only if the x is the realization of a function to exert an effect on the frequency, rate or extent of y" ;
rdfs:domain obo:BFO_0000015 ;
rdfs:range obo:BFO_0000015 .
obo:BFO_0000055 a rdf:Property ;
rdfs:label "realizes"@en ;
rdfs:comment "Paraphrase of elucidation: a relation between a process and a realizable entity, where there is some material entity that is bearer of the realizable entity and participates in the process, and the realizable entity comes to be realized in the course of the process" ;
rdfs:domain obo:BFO_0000015 ;
rdfs:range obo:BFO_0000017 .
obo:IDO_0000538 a rdfs:Class ;
rdfs:label "pathogen host"@en ;
rdfs:comment "An organism bearing a pathogen host role."@en ;
rdfs:subClassOf obo:IDO_0000531 , obo:OBI_0100026 .
obo:IDO_0000211 a rdfs:Class ;
rdfs:label "_obsolete_quality of pathogen"@en ;
rdfs:subClassOf .
obo:IDO_0000505 a rdfs:Class ;
rdfs:label "viremia"@en ;
rdfs:comment "An infection that has as part virus particles located in the blood."@en ;
rdfs:subClassOf obo:IDO_0000472 , obo:IDO_0000586 .
obo:BFO_0000051 a rdf:Property ;
rdfs:label "has part"@en ;
rdfs:comment "a core relation that holds between a whole and its part"@en ;
rdfs:range , obo:IDO_0000596 , obo:IDO_0000460 .
obo:BFO_0000050 a rdf:Property ;
rdfs:label "part of"@en ;
rdfs:comment "a core relation that holds between a part and its whole"@en ;
rdfs:seeAlso ;
rdfs:range .
obo:IDO_0000545 a rdfs:Class ;
rdfs:label "infectious agent reservoir"@en ;
rdfs:comment "A material entity bearing an infectious agent reservoir role."@en ;
rdfs:subClassOf obo:BFO_0000040 .
obo:IDO_0000407 a rdfs:Class ;
rdfs:label "primary infectious disposition"@en ;
rdfs:comment "An infectious disposition to become part of a disorder in organisms that have intact defenses."@en ;
rdfs:subClassOf obo:IDO_0000452 .
obo:IDO_0000053 a rdfs:Class ;
rdfs:label "_obsolete_antibiotic"@en ;
rdfs:subClassOf .
obo:IDO_0000083 a rdfs:Class ;
rdfs:label "_obsolete_transmission"@en ;
rdfs:comment "'the process by which an infectious agent passes from one organism to another organism'-ID[O]:0000083: the process by which an infectious agent passes from one organism to another organism"@en ;
rdfs:subClassOf .
obo:IDO_0000597 a rdfs:Class ;
rdfs:label "host exposure to environment containing infectious agent"@en ;
rdfs:comment "A process in which a potential host of an infectious agent is exposed to an environment in which the infectious agent is present and physical contact between the two can occur, but such contact is not planned."@en ;
rdfs:subClassOf obo:IDO_0000658 .
obo:IDO_0000587 a rdfs:Class ;
rdfs:label "genetic resistance to infectious agent"@en ;
rdfs:comment "A resistance to infectious agent that inheres in an organism in virtue of a specific allele or combination of alleles in its genome."@en ;
rdfs:subClassOf obo:IDO_0000446 .
obo:GO_0044409 a rdfs:Class ;
rdfs:label "entry into host" ;
rdfs:comment "Penetration by an organism into the body, tissues, or cells of the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction." ;
rdfs:subClassOf obo:GO_0051704 .
obo:IDO_0001013 a rdfs:Class ;
rdfs:label "immunosuppressed human experiencing chronic systemic steroid use-based immunosuppression"@en ;
rdfs:comment "An immunosuppressed organism that is a human experiencing chronic systemic steroid use-based immunosuppression." ;
rdfs:subClassOf obo:IDO_0001012 .
obo:IDO_0000422 a rdfs:Class ;
rdfs:label "biological vehicle of infectious agent role"@en ;
rdfs:comment "An infectious agent vehicle role borne by an entity in virtue of the fact that the entity is living or contains living cells other than those that have the infectious disposition."@en ;
rdfs:subClassOf obo:IDO_0000421 .
obo:GO_0051093 a rdfs:Class ;
rdfs:label "negative regulation of developmental process" ;
rdfs:comment "Any process that stops, prevents or reduces the rate or extent of development, the biological process whose specific outcome is the progression of an organism over time from an initial condition (e.g. a zygote, or a young adult) to a later condition (e.g. a multicellular animal or an aged adult)." ;
rdfs:subClassOf obo:GO_0065007 .
obo:GO_0032502 a rdfs:Class ;
rdfs:label "developmental process" ;
rdfs:comment "A biological process whose specific outcome is the progression of an integrated living unit: an anatomical structure (which may be a subcellular structure, cell, tissue, or organ), or organism over time from an initial condition to a later condition." ;
rdfs:subClassOf obo:GO_0008150 .
obo:IDO_0000576 a rdfs:Class ;
rdfs:label "innate immunity to infectious agent"@en ;
rdfs:comment "An immunity to infectious agent that inheres in an organism in virtue of germline encoded components that directly recognize components of potential pathogens."@en ;
rdfs:subClassOf obo:IDO_0000448 .
obo:IDO_0000646 a rdfs:Class ;
rdfs:label "trichomoniasis"@en ;
rdfs:comment "An infection that has as part organisms of the Species Trichomonas vaginalis."@en ;
rdfs:subClassOf obo:IDO_0000586 .
obo:IDO_0000527 a rdfs:Class ;
rdfs:label "_obsolete_infectious organism"@en ;
rdfs:comment "An infectious agent that is an organism."@en ;
rdfs:subClassOf .
obo:IDO_0000630 a rdfs:Class ;
rdfs:label "hospital-acquired infection"@en ;
rdfs:comment "An infection resulting from a transmission process that unfolds in a hospital."@en ;
rdfs:subClassOf obo:IDO_0000586 .
obo:IDO_0001006 a rdfs:Class ;
rdfs:label "immunosuppressed organism experiencing infection-based immunosuppression"@en ;
rdfs:comment "A pathologically immunosuppressed organism that is experiencing infection-based immunosuppression." ;
rdfs:subClassOf obo:IDO_0001005 .
obo:IDO_0000400 a rdfs:Class ;
rdfs:label "symbiont role"@en ;
rdfs:comment "A role borne by an organism in symbiosis."@en ;
rdfs:subClassOf obo:BFO_0000023 .
obo:IDO_0000009 a rdfs:Class ;
rdfs:label "_obsolete_latency"@en ;
rdfs:comment "'infection has occurred, but it might not have manifested itselfnquality of being in a non replicative statentime to manifest itself na pathogen when it is in a non replicative state'-ID[O]:0000009: infection has occurred, but it might not have manifested itselfnquality of being in a non replicative statentime to manifest itself na pathogen when it is in a non replicative state"@en ;
rdfs:subClassOf .
obo:BFO_0000030 a rdfs:Class ;
rdfs:label "object"@en ;
rdfs:subClassOf obo:BFO_0000040 .
obo:IDO_0000429 a rdfs:Class ;
rdfs:label "_obsolete_endotoxin disposition"@en ;
rdfs:comment "A toxin disposition that inheres in a protein or protein complex that is a structural component of a pathogen and is released from the pathogen only upon cytolysis."@en ;
rdfs:subClassOf obo:IDO_0000426 , .
obo:IDO_0000059 a rdfs:Class ;
rdfs:label "_obsolete_reservoir"@en ;
rdfs:comment "'holding place for a potential pathogen...animate or inanimate'-ID[O]:0000059: holding place for a potential pathogen...animate or inanimate"@en ;
rdfs:subClassOf .
obo:IDO_0000068 a rdfs:Class ;
rdfs:label "_obsolete_emerging pathogen"@en ;
rdfs:subClassOf .
obo:IDO_0000451 a rdfs:Class ;
rdfs:label "invasive disposition"@en ;
rdfs:comment "A disposition borne by an infectious agent that is the disposition to penetrate the epithelial barriers of an organism of another Species."@en ;
rdfs:subClassOf obo:BFO_0000016 .
obo:IDO_0000020 a rdfs:Class ;
rdfs:label "_obsolete_epidemic"@en ;
rdfs:subClassOf .
obo:IDO_0000531 a rdfs:Class ;
rdfs:label "host"@en ;
rdfs:comment "An organism bearing a host role."@en ;
rdfs:subClassOf obo:OBI_0100026 .
obo:IDO_0000031 a rdfs:Class ;
rdfs:label "_obsolete_endogenous"@en ;
rdfs:subClassOf .
obo:IDO_0000200 a rdfs:Class ;
rdfs:label "_obsolete_mode of transmission"@en ;
rdfs:subClassOf .
obo:IDO_0000507 a rdfs:Class ;
rdfs:label "_obsolete_septicemia"@en ;
rdfs:comment "A bacteremia in which the baceteria are replicating."@en ;
rdfs:subClassOf .
obo:GO_0040007 a rdfs:Class ;
rdfs:label "growth" ;
rdfs:comment "The increase in size or mass of an entire organism, a part of an organism or a cell." ;
rdfs:subClassOf obo:GO_0008150 .
obo:IDO_0000042 a rdfs:Class ;
rdfs:label "_obsolete_invasin"@en ;
rdfs:subClassOf .
obo:IDO_0000226 a rdfs:Class ;
rdfs:label "_obsolete_pathogen life cycle"@en ;
rdfs:comment "'is this just the part of the life cycle of the biotic entity that has role pathogen for the period of time while it has role pathogen?nncan include phases in the existence of the entity before it becomes a pathogen'-ID[O]:0000226: is this just the part of the life cycle of the biotic entity that has role pathogen for the period of time while it has role pathogen?nncan include phases in the existence of the entity before it becomes a pathogen"@en ;
rdfs:subClassOf .
obo:IDO_0000608 a rdfs:Class ;
rdfs:label "replication"@en ;
rdfs:comment "A production process in which a participant creates a copy of itself."@en ;
rdfs:subClassOf obo:IDO_0000607 .
obo:IDO_0000300 a rdfs:Class ;
rdfs:label "_obsolete_progression rate"@en ;
rdfs:subClassOf .
obo:IDO_0000602 a rdfs:Class ;
rdfs:label "host exposure to substance that might have infectious agent"@en ;
rdfs:comment "A host exposure to environment with infectious agent where the environment contains a material entity that has been assessed to confer a risk of infection."@en ;
rdfs:subClassOf obo:IDO_0000597 .
obo:IDO_0000495 a rdfs:Class ;
rdfs:label "infectious disease course"@en ;
rdfs:comment "A disease course that is the realization of an infectious disease."@en ;
rdfs:subClassOf obo:OGMS_0000063 .
obo:IDO_0000057 a rdfs:Class ;
rdfs:label "_obsolete_carrier"@en ;
rdfs:subClassOf .
obo:IDO_0000418 a rdfs:Class ;
rdfs:label "infectious agent vector role"@en ;
rdfs:comment "An infectious agent transporter role that is borne by an organism active in the transfer of an infectious agent to an organism of another Species and in which the agent is infectious."@en ;
rdfs:subClassOf obo:IDO_0000417 .
obo:IDO_0000613 a rdfs:Class ;
rdfs:label "_obsolete_biological object"@en ;
rdfs:comment "primitive"@en ;
rdfs:subClassOf .
obo:IDO_0000462 a rdfs:Class ;
rdfs:label "_obsolete_symptomatic host"@en ;
rdfs:comment "A host exhibiting disease symptoms."@en ;
rdfs:subClassOf .
obo:IDO_0000549 a rdfs:Class ;
rdfs:label "toxin"@en ;
rdfs:comment "A molecular entity that has a toxin disposition."@en ;
rdfs:subClassOf obo:CHEBI_23367 .
obo:BFO_0000006 a rdfs:Class ;
rdfs:label "spatial region"@en ;
rdfs:subClassOf obo:BFO_0000141 .
obo:UBERON_0000178 a rdfs:Class ;
rdfs:label "blood" ;
rdfs:comment "A fluid that is composed of blood plasma and erythrocytes." ;
rdfs:subClassOf obo:CARO_0000000 .
obo:IDO_0000474 a rdfs:Class ;
rdfs:label "systemic infection"@en ;
rdfs:comment "An infection for which the infectious agents that are part of the infection are distributed throughout the host."@en ;
rdfs:subClassOf obo:IDO_0000586 .
obo:IDO_0000563 a rdfs:Class ;
rdfs:label "microbicide"@en ;
rdfs:comment "A material entity with an antimicrobial disposition that is realized in a process of killing microorganisms."@en ;
rdfs:subClassOf obo:BFO_0000040 , obo:IDO_0000558 .
obo:IDO_0000306 a rdfs:Class ;
rdfs:label "_obsolete_fitness"@en ;
rdfs:comment "'is a quality relating to both bacteria and host'-ID[O]:0000306: is a quality relating to both bacteria and host"@en ;
rdfs:subClassOf .
obo:BFO_0000182 a rdfs:Class ;
rdfs:label "history"@en ;
rdfs:subClassOf obo:BFO_0000015 .
obo:IDO_0000542 a rdfs:Class ;
rdfs:label "biological vector of infectious agent"@en ;
rdfs:comment "An infectious agent vector bearing a biological vector of infectious agent role."@en ;
rdfs:subClassOf obo:IDO_0000540 , obo:OBI_0100026 .
obo:IDO_0000215 a rdfs:Class ;
rdfs:label "_obsolete_quality of host population"@en ;
rdfs:subClassOf .
obo:IDO_0000463 a rdfs:Class ;
rdfs:label "infectious agent transmissibility"@en ;
rdfs:comment "A quality that inheres in an infectious agent and is the likelihood that the infectious agent will undergo a horizontal transmission process."@en ;
rdfs:subClassOf obo:BFO_0000019 .
obo:BFO_0000029 a rdfs:Class ;
rdfs:label "site"@en ;
rdfs:subClassOf obo:BFO_0000141 .
obo:IDO_0000001 a rdfs:Class ;
rdfs:label "_obsolete_role"@en ;
rdfs:subClassOf .
obo:IDO_0000441 a rdfs:Class ;
rdfs:label "antifungal disposition"@en ;
rdfs:comment "A disposition to kill or inhibit the development or reproduction of fungal organisms."@en ;
rdfs:subClassOf obo:BFO_0000016 .
obo:IDO_0000404 a rdfs:Class ;
rdfs:label "infectious agent role"@en ;
rdfs:comment "A role borne by an infectious agent when contained in a host in which its infectious disposition can be realized."@en ;
rdfs:subClassOf obo:IDO_0000405 .
obo:IDO_0000523 a rdfs:Class ;
rdfs:label "obligatory symbiont"@en ;
rdfs:comment "An organism that can only reach developmental maturity, replicate, or persist in symbiosis."@en ;
rdfs:subClassOf obo:IDO_0000522 .
obo:CARO_0000000 a rdfs:Class ;
rdfs:label "anatomical entity" ;
rdfs:comment "A part of a multicellular organism that is either an immaterial entity or a material entity with granularity above the level of a protein complex. Or, a substance produced by a multicellular organism with granularity above the level of a protein complex." ;
rdfs:subClassOf obo:BFO_0000040 .
obo:GO_0002443 a rdfs:Class ;
rdfs:label "leukocyte mediated immunity" ;
rdfs:comment "Any process involved in the carrying out of an immune response by a leukocyte." ;
rdfs:subClassOf obo:GO_0006955 .
obo:GO_0019815 a rdfs:Class ;
rdfs:label "B cell receptor complex" ;
rdfs:comment "An immunoglobulin complex that is present in the plasma membrane of B cells and that in its canonical form is composed of two identical immunoglobulin heavy chains and two identical immunoglobulin light chains and a signaling subunit, a heterodimer of the Ig-alpha and Ig-beta proteins." ;
rdfs:subClassOf obo:GO_0032991 .
obo:IDO_0000473 a rdfs:Class ;
rdfs:label "intracellular infection"@en ;
rdfs:comment "An infection for which the infectious agents that are part of the infection persist inside host cells."@en ;
rdfs:subClassOf obo:IDO_0000586 .
obo:IDO_0000075 a rdfs:Class ;
rdfs:label "_obsolete_nonspecific adherence"@en ;
rdfs:subClassOf .
obo:GO_0044403 a rdfs:Class ;
rdfs:label "symbiosis, encompassing mutualism through parasitism" ;
rdfs:comment "An interaction between two organisms living together in more or less intimate association. Microscopic symbionts are often referred to as endosymbionts. The various forms of symbiosis include parasitism, in which the association is disadvantageous or destructive to one of the organisms; mutualism, in which the association is advantageous, or often necessary to one or both and not harmful to either; and commensalism, in which one member of the association benefits while the other is not affected. However, mutualism, parasitism, and commensalism are often not discrete categories of interactions and should rather be perceived as a continuum of interaction ranging from parasitism to mutualism. In fact, the direction of a symbiotic interaction can change during the lifetime of the symbionts due to developmental changes as well as changes in the biotic/abiotic environment in which the interaction occurs." ;
rdfs:subClassOf obo:GO_0051704 .
obo:IDO_0000094 a rdfs:Class ;
rdfs:label "_obsolete_pathogen-induced apoptosis"@en ;
rdfs:subClassOf .
obo:IDO_0000530 a rdfs:Class ;
rdfs:label "primary pathogen"@en ;
rdfs:comment "An infectious agent with a primary infectious disposition."@en ;
rdfs:subClassOf obo:IDO_0000596 , obo:OBI_0100026 .
obo:IDO_0000006 a rdfs:Class ;
rdfs:label "_obsolete_toxicity"@en ;
rdfs:subClassOf .
obo:IDO_0000086 a rdfs:Class ;
rdfs:label "_obsolete_engulfment"@en ;
rdfs:subClassOf .
obo:IDO_0000431 a rdfs:Class ;
rdfs:label "infectious agent portal of exit role"@en ;
rdfs:comment "A role borne by an anatomical entity in virtue of the fact that it serves as the site through which an infectious agent exits a host."@en ;
rdfs:subClassOf obo:BFO_0000023 .
obo:IDO_0000491 a rdfs:Class ;
rdfs:label "infectious disease endemic level"@en ;
rdfs:comment "An infectious disease prevalence that is typical for an infectious disease in an organism population. "@en ;
rdfs:subClassOf obo:IDO_0000485 .
obo:IDO_0000570 a rdfs:Class ;
rdfs:label "subclinical infection"@en ;
rdfs:comment "An infection that is part of an asymptomatic host."@en ;
rdfs:subClassOf obo:IDO_0000586 .
obo:IDO_0000038 a rdfs:Class ;
rdfs:label "_obsolete_parasite"@en ;
rdfs:subClassOf .
obo:BFO_0000038 a rdfs:Class ;
rdfs:label "one-dimensional temporal region"@en ;
rdfs:subClassOf obo:BFO_0000008 .
obo:IDO_0000490 a rdfs:Class ;
rdfs:label "infectious disease endemicity"@en ;
rdfs:comment "A quality that inheres in an organism population in virtue of the fact that infections of the type that causes an infectious disease are maintained in the population via intra-population transmission or by transmission from a local reservoir."@en ;
rdfs:subClassOf obo:BFO_0000019 .
obo:IDO_0000107 a rdfs:Class ;
rdfs:label "_obsolete_prevention of infection"@en ;
rdfs:subClassOf .
obo:IDO_0000486 a rdfs:Class ;
rdfs:label "infection prevalence"@en ;
rdfs:comment "A quality that inheres in an organism population and is the number of organisms in the population infected with an infectious agent at a specified time."@en ;
rdfs:subClassOf obo:BFO_0000019 .
obo:IDO_0000555 a rdfs:Class ;
rdfs:label "disinfectant"@en ;
rdfs:comment "A material entity bearing a disinfectant role."@en ;
rdfs:subClassOf obo:BFO_0000040 .
obo:IDO_0000598 a rdfs:Class ;
rdfs:label "host living with infected household contact"@en ;
rdfs:comment "A host exposure to environment with infectious agent where the environment is a household that also has an infected host"@en ;
rdfs:subClassOf obo:IDO_0000597 .
obo:IDO_0001002 a rdfs:Class ;
rdfs:label "transition to clinical abnormality" ;
rdfs:comment "A process by which a part of an organism or something contained in an organism becomes clinically abnormal." ;
rdfs:subClassOf obo:BFO_0000015 .
obo:IDO_0000110 a rdfs:Class ;
rdfs:label "_obsolete_modulation of inflammatory response"@en ;
rdfs:subClassOf .
obo:IDO_0000575 a rdfs:Class ;
rdfs:label "_obsolete_viral latency"@en ;
rdfs:comment ""@en ;
rdfs:subClassOf .
obo:IDO_0000586 a rdfs:Class ;
rdfs:label "infection"@en ;
rdfs:comment "A part of an extended organism that itself has as part a population of one or more infectious agents and that (1) exists as a result of processes initiated by members of the infectious agent population and is (2) clinically abnormal in virtue of the presence of this infectious agent population, or (3) has a disposition to bring clinical abnormality to immunocompetent organisms of the same Species as the host (the organism corresponding to the extended organism) through transmission of a member or offspring of a member of the infectious agent population."@en ;
rdfs:subClassOf obo:BFO_0000040 .
obo:IDO_0000208 a rdfs:Class ;
rdfs:label "_obsolete_seroprevalence"@en ;
rdfs:comment "'prevalence as measured by antibody'-ID[O]:0000208: prevalence as measured by antibody"@en ;
rdfs:subClassOf .
obo:IDO_0000219 a rdfs:Class ;
rdfs:label "_obsolete_incubation period"@en ;
rdfs:comment "'agent is incubated?ndisease is incubated?'-ID[O]:0000219: agent is incubated?ndisease is incubated?"@en ;
rdfs:subClassOf .
obo:IDO_0000497 a rdfs:Class ;
rdfs:label "immunization against infectious agent"@en ;
rdfs:comment "A process by which an organism acquires immunity to an infectious agent."@en ;
rdfs:subClassOf obo:BFO_0000015 .
obo:IDO_0000480 a rdfs:Class ;
rdfs:label "infection incidence"@en ;
rdfs:comment "A quality that inheres in an organism population and is the number of organisms in the population that become infected with an infectious agent during a specified period of time."@en ;
rdfs:subClassOf obo:BFO_0000019 .
obo:IDO_0000028 a rdfs:Class ;
rdfs:label "_obsolete_antibiotic resistance"@en ;
rdfs:subClassOf .
obo:IDO_0000635 a rdfs:Class ;
rdfs:label "source of infection role"@en ;
rdfs:comment "A role borne by a material entity in virtue of the fact that it contains a site from which an infectious agent is transmitted."@en ;
rdfs:subClassOf obo:BFO_0000023 .
obo:IDO_0000581 a rdfs:Class ;
rdfs:label "antibiotic resistance"@en ;
rdfs:comment "A resistance to drug that mitigates the damaging effects of an antibiotic."@en ;
rdfs:subClassOf obo:IDO_0000445 .
obo:IDO_0000061 a rdfs:Class ;
rdfs:label "_obsolete_mobile genetic element"@en ;
rdfs:subClassOf .
obo:IDO_0000452 a rdfs:Class ;
rdfs:label "infectious disposition"@en ;
rdfs:comment "A pathogenic disposition that inheres in an organism and is a disposition for that organism (1) to be transmitted to a host, (2) to establish itself in the host, (3) to initiate processes that result in a disorder in the host, and (4) to become part of that disorder."@en ;
rdfs:subClassOf obo:IDO_0000450 .
obo:IDO_0000303 a rdfs:Class ;
rdfs:label "_obsolete_highly exposed persistently seronegative"@en ;
rdfs:subClassOf .
obo:IDO_0000012 a rdfs:Class ;
rdfs:label "_obsolete_immunity"@en ;
rdfs:subClassOf .
obo:IDO_0000233 a rdfs:Class ;
rdfs:label "_obsolete_infectious disease progression stage"@en ;
rdfs:subClassOf .
obo:IDO_0000440 a rdfs:Class ;
rdfs:label "antiviral disposition"@en ;
rdfs:comment "A disposition to kill or inhibit the lifecycle of viruses."@en ;
rdfs:subClassOf obo:BFO_0000016 .
obo:IDO_0000415 a rdfs:Class ;
rdfs:label "pathogen host role"@en ;
rdfs:comment "A host role borne by an organism in virtue of the fact that its extended organism contains a pathogen."@en ;
rdfs:subClassOf obo:IDO_0000629 .
obo:IDO_0000479 a rdfs:Class ;
rdfs:label "infectious disease incidence"@en ;
rdfs:comment "A quality that inheres in an organism population and is the number of realizations of an infectious disease for which the infectious disease course begins during a specified period of time."@en ;
rdfs:subClassOf obo:BFO_0000019 .
obo:IDO_0000596 a rdfs:Class ;
rdfs:label "infectious agent"@en ;
rdfs:comment "An organism that has an infectious disposition."@en ;
rdfs:subClassOf obo:IDO_0000528 , obo:OBI_0100026 .
obo:IDO_0000050 a rdfs:Class ;
rdfs:label "_obsolete_medicine"@en ;
rdfs:subClassOf .
obo:CL_0000738 a rdfs:Class ;
rdfs:label "leukocyte" ;
rdfs:comment "An achromatic cell of the myeloid or lymphoid lineages capable of ameboid movement, found in blood or other tissue." ;
rdfs:subClassOf obo:CL_0000000 .
obo:IDO_0000017 a rdfs:Class ;
rdfs:label "_obsolete_mortality"@en ;
rdfs:subClassOf .
obo:IDO_0000534 a rdfs:Class ;
rdfs:label "paratenic host"@en ;
rdfs:comment "An organism bearing a paratenic host role."@en ;
rdfs:subClassOf obo:IDO_0000531 , obo:OBI_0100026 .
obo:NCBITaxon_2157 a rdfs:Class ;
rdfs:label "Archaea" ;
rdfs:subClassOf obo:OBI_0100026 .
obo:IDO_0000574 a rdfs:Class ;
rdfs:label "_obsolete_invasin"@en ;
rdfs:comment "synonym of invasion factor"@en ;
rdfs:subClassOf .
obo:IDO_0000559 a rdfs:Class ;
rdfs:label "antiviral"@en ;
rdfs:comment "A material entity bearing an antiviral disposition."@en ;
rdfs:subClassOf obo:BFO_0000040 .
obo:IDO_0000049 a rdfs:Class ;
rdfs:label "_obsolete_antimicrobial"@en ;
rdfs:subClassOf .
obo:BFO_0000011 a rdfs:Class ;
rdfs:label "spatiotemporal region"@en ;
rdfs:subClassOf obo:BFO_0000003 .
obo:IDO_0000541 a rdfs:Class ;
rdfs:label "mechanical vector of infectious agent"@en ;
rdfs:comment "An infectious agent vector bearing a mechanical vector of infectious agent role."@en ;
rdfs:subClassOf obo:IDO_0000540 , obo:OBI_0100026 .
obo:IDO_0000501 a rdfs:Class ;
rdfs:label "passive immunization against infectious agent"@en ;
rdfs:comment "An immunization that begins with transfer to an organism of molecules not produced by that organism and that confer immunity against an infectious agent."@en ;
rdfs:subClassOf obo:IDO_0000497 .
obo:BFO_0000141 a rdfs:Class ;
rdfs:label "immaterial entity"@en ;
rdfs:subClassOf obo:BFO_0000004 .
obo:IDO_0000097 a rdfs:Class ;
rdfs:label "_obsolete_pathogen spread through host"@en ;
rdfs:subClassOf .
obo:IDO_0000516 a rdfs:Class ;
rdfs:label "_obsolete_configured infectious organism population"@en ;
rdfs:comment "An infectious organism population with a certain configuration quality (OGMS:0000039) (distributed across a spatial region (e.g., anatomical location in a host) in a particular way). Put e.g. In comments"@en ;
rdfs:subClassOf .
obo:IDO_0000564 a rdfs:Class ;
rdfs:label "viricide"@en ;
rdfs:comment "A material entity with an antiviral disposition that is realized in a process of killing viruses."@en ;
rdfs:subClassOf obo:BFO_0000040 , obo:IDO_0000559 .
obo:IDO_0000103 a rdfs:Class ;
rdfs:label "_obsolete_outbreak"@en ;
rdfs:subClassOf .
obo:IDO_0000114 a rdfs:Class ;
rdfs:label "_obsolete_phase variation"@en ;
rdfs:subClassOf .
obo:IDO_0000023 a rdfs:Class ;
rdfs:label "_obsolete_zoonotic"@en ;
rdfs:subClassOf .
obo:BFO_0000040 a rdfs:Class ;
rdfs:label "material entity"@en ;
rdfs:comment "An independent continuant that is spatially extended whose identity is independent of that of other entities and can be maintained through time."@en ;
rdfs:subClassOf obo:BFO_0000004 .
obo:IDO_0000052 a rdfs:Class ;
rdfs:label "_obsolete_vaccine"@en ;
rdfs:subClassOf .
obo:GO_0043093 a rdfs:Class ;
rdfs:label "FtsZ-dependent cytokinesis" ;
rdfs:comment "A cytokinesis process that involves a set of conserved proteins including FtsZ, and results in the formation of two similarly sized and shaped cells." ;
rdfs:subClassOf obo:GO_0000003 .
obo:IDO_0000629 a rdfs:Class ;
rdfs:label "host role"@en ;
rdfs:comment "A role borne by an organism in virtue of the fact that it's extended organism contains a material entity other than the organism."@en ;
rdfs:subClassOf obo:BFO_0000023 .
obo:IDO_0000201 a rdfs:Class ;
rdfs:label "_obsolete_end reservoir"@en ;
rdfs:subClassOf .
obo:IDO_0000642 a rdfs:Class ;
rdfs:label "simple infection"@en ;
rdfs:comment "An infection comprised of infectious organisms all of the same Species."@en ;
rdfs:subClassOf obo:IDO_0000586 .
obo:BFO_0000005 a rdfs:Class ;
rdfs:label "obsolete dependent continuant"@en ;
rdfs:comment "A continuant that is either dependent on one or other independent continuant bearers or inheres in or is borne by other entities."@en ;
rdfs:subClassOf .
obo:IDO_0000225 a rdfs:Class ;
rdfs:label "_obsolete_extrinsic incubation period"@en ;
rdfs:subClassOf .
obo:IDO_0000475 a rdfs:Class ;
rdfs:label "local infection"@en ;
rdfs:comment "An infection for which the infectious agents that are part of the infection are limited to a relatively small area of the host's body."@en ;
rdfs:subClassOf obo:IDO_0000586 .
obo:IDO_0000401 a rdfs:Class ;
rdfs:label "mutualist role"@en ;
rdfs:comment "A symbiont role borne by an organism in virtue of the fact that both symbionts derive a growth, survival, or fitness advantage from symbiosis."@en ;
rdfs:subClassOf obo:IDO_0000400 .
obo:IDO_0000074 a rdfs:Class ;
rdfs:label "_obsolete_pathogen adherence to host cell"@en ;
rdfs:comment "'create cross products for \"host\" and \"pathogen\" that will be part of this process.'-ID[O]:0000074: create cross products for \"host\" and \"pathogen\" that will be part of this process."@en ;
rdfs:subClassOf .
obo:IDO_0001012 a rdfs:Class ;
rdfs:label "immunosuppressed organism experiencing chronic systemic steroid use-based immunosuppression"@en ;
rdfs:comment "a pathologically immunosuppressed organism that is experiencing chronic systemic steroid use-based immunosuppression." ;
rdfs:subClassOf obo:IDO_0001011 .
obo:IDO_0001007 a rdfs:Class ;
rdfs:label "immunosuppressed organism experiencing HIV-based immunosuppression"@en ;
rdfs:comment "A pathologically immunosuppressed organism that is experiencing HIV-based immunosuppression." ;
rdfs:subClassOf obo:IDO_0001006 .
obo:IDO_0000470 a rdfs:Class ;
rdfs:label "drug susceptibility of infectious agent"@en ;
rdfs:comment "A drug susceptibility that inheres in an infectious agent and is the degree to which the infectious agent can be harmed or inhibited from surviving by a drug."@en ;
rdfs:subClassOf obo:IDO_0000469 .
obo:IDO_0000550 a rdfs:Class ;
rdfs:label "exotoxin"@en ;
rdfs:comment "A molecular entity bearing an exotoxin disposition."@en ;
rdfs:subClassOf obo:CHEBI_23367 , obo:IDO_0000549 .
obo:IDO_0000223 a rdfs:Class ;
rdfs:label "_obsolete_host recovery period"@en ;
rdfs:subClassOf .
obo:BFO_0000023 a rdfs:Class ;
rdfs:label "role"@en ;
rdfs:comment "A realizable entity the manifestation of which brings about some result or end that is not essential to a continuant in virtue of the kind of thing that it is but that can be served or participated in by that kind of continuant in some kinds of natural, social or institutional contexts."@en ;
rdfs:subClassOf obo:BFO_0000017 .
obo:IDO_0000607 a rdfs:Class ;
rdfs:label "production"@en ;
rdfs:comment "A process in which an entity comes into being as a result of the process."@en ;
rdfs:subClassOf obo:BFO_0000015 .
obo:CL_0000000 a rdfs:Class ;
rdfs:label "cell" ;
rdfs:comment "A material entity of anatomical origin (part of or deriving from an organism) that has as its parts a maximally connected cell compartment surrounded by a plasma membrane." ;
rdfs:subClassOf obo:CARO_0000000 .
obo:IDO_0000439 a rdfs:Class ;
rdfs:label "antimicrobial disposition"@en ;
rdfs:comment "A disposition to kill or inhibit the development or reproduction of microorganisms."@en ;
rdfs:subClassOf obo:BFO_0000016 .
obo:GO_0002250 a rdfs:Class ;
rdfs:label "adaptive immune response" ;
rdfs:comment "An immune response mediated by cells expressing specific receptors for antigen produced through a somatic diversification process, and allowing for an enhanced secondary response to subsequent exposures to the same antigen (immunological memory)." ;
rdfs:subClassOf obo:GO_0006955 .
obo:BFO_0000027 a rdfs:Class ;
rdfs:label "object aggregate"@en ;
rdfs:subClassOf obo:BFO_0000040 .
obo:IDO_0000560 a rdfs:Class ;
rdfs:label "antifungal"@en ;
rdfs:comment "A material entity bearing an antifungal disposition."@en ;
rdfs:subClassOf obo:BFO_0000040 .
obo:IDO_0000647 a rdfs:Class ;
rdfs:label "leptospirosis"@en ;
rdfs:comment "An infection that has as part organisms of the Genus Leptospira."@en ;
rdfs:subClassOf obo:IDO_0000586 .
obo:IDO_0000449 a rdfs:Class ;
rdfs:label "sterilizing immunity to infectious agent"@en ;
rdfs:comment "An immunity to infectious agent that results in elimination of the infectious agent from the host."@en ;
rdfs:subClassOf obo:IDO_0000448 .
obo:IDO_0000030 a rdfs:Class ;
rdfs:label "_obsolete_invasive"@en ;
rdfs:subClassOf .
obo:IDO_0000100 a rdfs:Class ;
rdfs:label "_obsolete_pathogen evasion of host immune response"@en ;
rdfs:subClassOf .
obo:IDO_0000085 a rdfs:Class ;
rdfs:label "_obsolete_penetration of host cell"@en ;
rdfs:subClassOf .
obo:GO_0008150 a rdfs:Class ;
rdfs:label "biological_process" ;
rdfs:comment "Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end." ;
rdfs:subClassOf obo:BFO_0000015 .
obo:IDO_0000467 a rdfs:Class ;
rdfs:label "susceptibility"@en ;
rdfs:comment "A quality that inheres in an entity and is the degree to which it can be harmed by another entity."@en ;
rdfs:subClassOf obo:BFO_0000019 .
obo:IDO_0000212 a rdfs:Class ;
rdfs:label "_obsolete_susceptibility"@en ;
rdfs:comment "'can change depending on environmentnnwhere should susceptibility factors go?'-ID[O]:0000212: can change depending on environmentnnwhere should susceptibility factors go?"@en ;
rdfs:subClassOf .
obo:IDO_0000636 a rdfs:Class ;
rdfs:label "sepsis"@en ;
rdfs:comment "A process that is a systemic inflammatory response to infection."@en ;
rdfs:subClassOf obo:BFO_0000015 .
obo:IDO_0000625 a rdfs:Class ;
rdfs:label "establishment of localization in host"@en ;
rdfs:comment "An establishment of localization process in which a material entity reaches a site in an organism in which it can survive, grow, multiply, or mature."@en ;
rdfs:subClassOf obo:GO_0051234 .
obo:IDO_0000665 a rdfs:Class ;
rdfs:label "source of infection" ;
rdfs:comment "A material entity bearing a source of infection role." ;
rdfs:subClassOf obo:BFO_0000040 .
obo:IDO_0000096 a rdfs:Class ;
rdfs:label "_obsolete_virus-induced cytopathogenesis"@en ;
rdfs:subClassOf .
obo:IDO_0000432 a rdfs:Class ;
rdfs:label "disinfectant role"@en ;
rdfs:comment "A role borne by a material entity in virtue of the fact that it has an antimicrobial disposition and is applied to a non-living entity. "@en ;
rdfs:subClassOf obo:BFO_0000023 .
obo:IDO_0000106 a rdfs:Class ;
rdfs:label "_obsolete_immunization"@en ;
rdfs:subClassOf .
obo:BFO_0000016 a rdfs:Class ;
rdfs:label "disposition"@en ;
rdfs:subClassOf obo:BFO_0000017 .
obo:IDO_0000027 a rdfs:Class ;
rdfs:label "_obsolete_drug resistance"@en ;
rdfs:subClassOf .
obo:IDO_0000569 a rdfs:Class ;
rdfs:label "asymptomatic host of infectious agent"@en ;
rdfs:comment "An organism that is host to an infectious agent and has no symptoms of the infectious disease associated with the infectious agent."@en ;
rdfs:subClassOf obo:IDO_0000537 .
obo:IAO_0000030 a rdfs:Class ;
rdfs:label "information content entity"@en ;
rdfs:subClassOf obo:BFO_0000031 .
obo:RO_0000058 a rdf:Property ;
rdfs:label "is concretized as"@en ;
rdfs:comment "A relationship between a generically dependent continuant and a specifically dependent continuant, in which the generically dependent continuant depends on some independent continuant in virtue of the fact that the specifically dependent continuant also depends on that same independent continuant. A generically dependent continuant may be concretized as multiple specifically dependent continuants."@en ;
rdfs:domain obo:BFO_0000031 ;
rdfs:range obo:BFO_0000020 .
obo:IDO_0000435 a rdfs:Class ;
rdfs:label "secondary infection role"@en ;
rdfs:comment "A role borne by an infectious disorder in virtue of the fact that (1) the host has at least two distinct infectious disorders, where neither arose from the other through metastasis, (2) at the time the infectious disorder was established in the host, the host had a primary infectious disorder, and (3) establishment of the infectious disorder occurs because of increased susceptibility to infectious disorders conferred by the primary infectious disorder."@en ;
rdfs:subClassOf obo:BFO_0000023 .
obo:IDO_0000653 a rdfs:Class ;
rdfs:label "reverse zoonosis" ;
rdfs:comment "An infectious disease that has as its physical basis an infectious disorder composed of infectious agents that have a reverse zoonotic disposition." ;
rdfs:subClassOf obo:IDO_0000436 .
obo:UBERON_0035944 a rdfs:Class ;
rdfs:label "life-death temporal boundary" ;
rdfs:comment "A life cycle temporal boundary that marks the end of the life cycle of the organism." ;
rdfs:subClassOf obo:BFO_0000015 .
obo:IDO_0000554 a rdfs:Class ;
rdfs:label "infectious agent portal of exit"@en ;
rdfs:comment "An anatomical entity bearing an infectious agent portal of exit role."@en ;
rdfs:subClassOf obo:CARO_0000000 .
obo:IDO_0000618 a rdfs:Class ;
rdfs:label "immunocompetence"@en ;
rdfs:comment "A disposition that is the ability to mount a normal immune response."@en ;
rdfs:subClassOf obo:BFO_0000016 .
obo:IDO_0000502 a rdfs:Class ;
rdfs:label "infectious disease epidemic"@en ;
rdfs:comment "A process of infectious disease realizations and for which there is a statistically significant increase in the infectious disease incidence of a population."@en ;
rdfs:subClassOf obo:BFO_0000015 .
obo:IDO_0000593 a rdfs:Class ;
rdfs:label "transmission period"@en ;
rdfs:comment "A continuous temporal interval during which a transmission process occurs."@en ;
rdfs:subClassOf obo:BFO_0000038 .
obo:IDO_0000034 a rdfs:Class ;
rdfs:label "_obsolete_endemic"@en ;
rdfs:subClassOf .
obo:IDO_0000513 a rdfs:Class ;
rdfs:label "infectious agent population"@en ;
rdfs:comment "An organism population whose members each have an infectious disposition."@en ;
rdfs:subClassOf obo:IDO_0000509 .
obo:IDO_0000632 a rdfs:Class ;
rdfs:label "neurotoxin"@en ;
rdfs:comment "A molecular entity with a toxin disposition, the realization of which damages or interferes with the function of nerve tissue."@en ;
rdfs:subClassOf obo:IDO_0000549 .
obo:IDO_0000412 a rdfs:Class ;
rdfs:label "dead-end host role"@en ;
rdfs:comment "A symbiont host role borne by an organism in virtue of the fact that its partner in symbiosis has the infectious disposition but cannot be transmitted from the host to the partner's definitive host."@en ;
rdfs:subClassOf obo:IDO_0000408 .
obo:IDO_0000078 a rdfs:Class ;
rdfs:label "_obsolete_fimbrial specific adherence"@en ;
rdfs:subClassOf .
obo:IDO_0000041 a rdfs:Class ;
rdfs:label "_obsolete_route of entry"@en ;
rdfs:subClassOf .
obo:IDO_0000571 a rdfs:Class ;
rdfs:label "resistant entity"@en ;
rdfs:comment "A material entity that has a resistance disposition."@en ;
rdfs:subClassOf obo:BFO_0000040 .
obo:IDO_0000089 a rdfs:Class ;
rdfs:label "_obsolete_passage through cell membrane"@en ;
rdfs:subClassOf .
obo:IDO_0000090 a rdfs:Class ;
rdfs:label "_obsolete_engulfment by nonphagocyte"@en ;
rdfs:subClassOf .
obo:GO_0051704 a rdfs:Class ;
rdfs:label "multi-organism process" ;
rdfs:comment "A biological process which involves another organism of the same or different species." ;
rdfs:subClassOf obo:GO_0008150 .
obo:IDO_0000658 a rdfs:Class ;
rdfs:label "host exposure to infectious agent" ;
rdfs:comment "A process in which a potential host of an infectious agent is exposed to an infectious agent." ;
rdfs:subClassOf obo:BFO_0000015 .
obo:IDO_0000409 a rdfs:Class ;
rdfs:label "definitive host role"@en ;
rdfs:comment "A symbiont host role borne by an organism in virtue of the fact that its partner in symbiosis reaches developmental maturity or reproduces sexually in the host. "@en ;
rdfs:subClassOf obo:IDO_0000408 .
obo:OGMS_0000087 a rdfs:Class ;
rdfs:label "extended organism" ;
rdfs:comment "An object aggregate consisting of an organism and all material entities located within the organism, overlapping the organism, or occupying sites formed in part by the organism."@en ;
rdfs:subClassOf obo:BFO_0000027 .
obo:IDO_0000621 a rdfs:Class ;
rdfs:label "acquired immunity to infectious agent"@en ;
rdfs:comment "An immunity to infectious agent that inheres in an organism in virtue of antigen receptors encoded by somatically diversified genes in the organism's genome and expressed by cells that have undergone selection during a primary immune response in that organism."@en ;
rdfs:subClassOf obo:IDO_0000448 .
obo:IDO_0000067 a rdfs:Class ;
rdfs:label "_obsolete_opportunistic pathogen"@en ;
rdfs:subClassOf .
obo:IDO_0000464 a rdfs:Class ;
rdfs:label "infectivity"@en ;
rdfs:comment "A quality that inheres in an infectious agent and is the liklihood that the infectious disposition will be realized upon exposure of a susceptible organism."@en ;
rdfs:subClassOf obo:BFO_0000019 .
obo:IDO_0000453 a rdfs:Class ;
rdfs:label "zoonotic disposition"@en ;
rdfs:comment "An infectious disposition that is the disposition to be transmitted from an infected, non-human host to a human host."@en ;
rdfs:subClassOf obo:IDO_0000452 .
obo:IDO_0000582 a rdfs:Class ;
rdfs:label "long-term non-progressor"@en ;
rdfs:comment "An organism experiencing a long-term non-progressing infectious disease course."@en ;
rdfs:subClassOf obo:OBI_0100026 .
obo:IDO_0000535 a rdfs:Class ;
rdfs:label "dead-end host"@en ;
rdfs:comment "An organism bearing a dead-end host role."@en ;
rdfs:subClassOf obo:IDO_0000531 , obo:OBI_0100026 .
obo:IDO_0000528 a rdfs:Class ;
rdfs:label "pathogen"@en ;
rdfs:comment "A material entity with a pathogenic disposition."@en ;
rdfs:subClassOf obo:BFO_0000040 .
obo:GO_0044411 a rdfs:Class ;
rdfs:label "entry into host through host barriers" ;
rdfs:comment "Penetration by an organism into its host organism via active breaching of the physical barriers of the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction." ;
rdfs:subClassOf obo:GO_0044409 .
obo:IDO_0000016 a rdfs:Class ;
rdfs:label "_obsolete_inactivated"@en ;
rdfs:subClassOf .
obo:IDO_0000614 a rdfs:Class ;
rdfs:label "_obsolete_replicating biological material entity"@en ;
rdfs:comment "A biological material entity that is capable of replication."@en ;
rdfs:subClassOf .
obo:BFO_0000001 a rdfs:Class ;
rdfs:label "entity"@en .
obo:BFO_0000026 a rdfs:Class ;
rdfs:label "one-dimensional spatial region"@en ;
rdfs:subClassOf obo:BFO_0000006 .
obo:IDO_0000024 a rdfs:Class ;
rdfs:label "_obsolete_immunocompromised"@en ;
rdfs:subClassOf .
obo:IDO_0000481 a rdfs:Class ;
rdfs:label "infectious disease incidence proportion"@en ;
rdfs:comment "A quality that inheres in an organism population and is the proportion of members of the population not experiencing an infectious disease course at the beginning of a specified period of time and in whom the infectious disease begins during the specified period of time. "@en ;
rdfs:subClassOf obo:BFO_0000019 .
obo:NCBITaxon_9606 a rdfs:Class ;
rdfs:label "Homo sapiens" ;
rdfs:subClassOf obo:NCBITaxon_2759 .
obo:IDO_0000013 a rdfs:Class ;
rdfs:label "_obsolete_protective"@en ;
rdfs:subClassOf .
obo:IDO_0000652 a rdfs:Class ;
rdfs:label "colonization of human perineum" ;
rdfs:comment "A colonization of human process in which the colonized site is a perineum." ;
rdfs:subClassOf obo:IDO_0000650 .
obo:RO_0002234 a rdf:Property ;
rdfs:label "has output"@en ;
rdfs:comment "p has output c iff c is a participant in p, c is present at the end of p, and c is not present at the beginning of p." ;
rdfs:domain obo:BFO_0000003 ;
rdfs:range obo:BFO_0000002 ;
rdfs:subPropertyOf obo:RO_0000057 .
obo:IDO_0000446 a rdfs:Class ;
rdfs:label "resistance to infectious agent"@en ;
rdfs:comment "A protective resistance that inheres in an organism and mitigates the damaging effects on that organism of an infectious agent."@en ;
rdfs:subClassOf obo:IDO_0000444 .
obo:IDO_0000558 a rdfs:Class ;
rdfs:label "antimicrobial"@en ;
rdfs:comment "A material entity with an antimicrobial disposition."@en ;
rdfs:subClassOf obo:BFO_0000040 .
obo:TRANS_0000002 a rdfs:Class ;
rdfs:label "indirect" ;
rdfs:comment "Indirect transmission is a transmission process during which the pathogen is indirectly transferred from a reservoir, source or host to another host by intermediary vehicles, vectors or as airborne dust particles." ;
rdfs:subClassOf obo:TRANS_0000000 .
obo:GO_0006959 a rdfs:Class ;
rdfs:label "humoral immune response" ;
rdfs:comment "An immune response mediated through a body fluid." ;
rdfs:subClassOf obo:GO_0006955 .
obo:IDO_0000487 a rdfs:Class ;
rdfs:label "infectious disease lifetime prevalence"@en ;
rdfs:comment "A quality that inheres in an organism population and is the number of organisms in the population who have, at any point during their lives, been bearers of an infectious disease and experienced realization of the disease."@en ;
rdfs:subClassOf obo:BFO_0000019 .
obo:IDO_0000478 a rdfs:Class ;
rdfs:label "_obsolete_chronic quality of infection"@en ;
rdfs:comment "A quality that inheres in an infection in virtue of the fact that the infection persists for an extended period of time."@en ;
rdfs:subClassOf .
obo:IDO_0000423 a rdfs:Class ;
rdfs:label "fomite role"@en ;
rdfs:comment "An infectious agent vehicle role borne by an entity in virtue of the fact that the entity is not alive."@en ;
rdfs:subClassOf obo:IDO_0000421 .
obo:IDO_0000117 a rdfs:Class ;
rdfs:label "_obsolete_epidemic spread of disease"@en ;
rdfs:subClassOf .
a rdfs:Class ;
rdfs:subClassOf obo:IAO_0000102 .
obo:BFO_0000004 a rdfs:Class ;
rdfs:label "independent continuant"@en ;
rdfs:comment "b is an independent continuant = Def. b is a continuant which is such that there is no c and no t such that b s-depends_on c at t. (axiom label in BFO2 Reference: [017-002])"@en ;
rdfs:subClassOf obo:BFO_0000002 .
obo:IDO_0000540 a rdfs:Class ;
rdfs:label "infectious agent vector"@en ;
rdfs:comment "An organism bearing an infectious agent vector role."@en ;
rdfs:subClassOf obo:OBI_0100026 .
obo:BFO_0000146 a rdfs:Class ;
rdfs:label "two-dimensional continuant fiat boundary"@en ;
rdfs:subClassOf obo:BFO_0000140 .
obo:IDO_0000438 a rdfs:Class ;
rdfs:label "invasion disposition"@en ;
rdfs:comment "A disposition borne by a biological macromolecule that is the disposition to facilitate breach of host epithelial barriers or entry into and survival in host cells."@en ;
rdfs:subClassOf obo:BFO_0000016 .
obo:BFO_0000015 a rdfs:Class ;
rdfs:label "process"@en ;
rdfs:comment "p is a process = Def. p is an occurrent that has temporal proper parts and for some time t, p s-depends_on some material entity at t. (axiom label in BFO2 Reference: [083-003])"@en ;
rdfs:subClassOf obo:BFO_0000003 .
obo:IDO_0000654 a rdfs:Class ;
rdfs:label "opportunistic pathogen" ;
rdfs:comment "An infectious agent with an opportunistic infectious disposition." ;
rdfs:subClassOf obo:IDO_0000596 , obo:OBI_0100026 .
obo:IDO_0000218 a rdfs:Class ;
rdfs:label "_obsolete_case of infectious disease"@en ;
rdfs:subClassOf .
obo:IDO_0000045 a rdfs:Class ;
rdfs:label "_obsolete_exotoxin"@en ;
rdfs:subClassOf .
obo:IDO_0000546 a rdfs:Class ;
rdfs:label "_obsolete_end reservoir of infectious agent"@en ;
rdfs:comment "A material entity bearing an end reservoir of infectious agent role."@en ;
rdfs:subClassOf .
obo:IDO_0000063 a rdfs:Class ;
rdfs:label "_obsolete_vector"@en ;
rdfs:comment "'holder and a carrier (actively transmits) and living: potentially make a cross product. every vector comes into contact with the target. (from one host to another?)'-ID[O]:0000063: holder and a carrier (actively transmits) and living: potentially make a cross product. every vector comes into contact with the target. (from one host to another?)"@en ;
rdfs:subClassOf .
obo:IDO_0000492 a rdfs:Class ;
rdfs:label "infectious disease endemic rate"@en ;
rdfs:comment "An infectious disease incidence rate that is typical for an infectious disease in an organism population. "@en ;
rdfs:subClassOf obo:IDO_0000483 .
obo:BFO_0000009 a rdfs:Class ;
rdfs:label "two-dimensional spatial region"@en ;
rdfs:subClassOf obo:BFO_0000006 .
obo:IDO_0000468 a rdfs:Class ;
rdfs:label "susceptibility to infectious agent"@en ;
rdfs:comment "A susceptibility that inheres in an organism and is the degree to which it can be harmed by an infectious agent."@en ;
rdfs:subClassOf obo:IDO_0000467 .
obo:IDO_0000056 a rdfs:Class ;
rdfs:label "_obsolete_host"@en ;
rdfs:subClassOf .
obo:IDO_0000229 a rdfs:Class ;
rdfs:label "_obsolete_oral-fecal transmission"@en ;
rdfs:subClassOf .
obo:IDO_0000539 a rdfs:Class ;
rdfs:label "infectious agent carrier"@en ;
rdfs:comment "An organism bearing the infectious agent carrier role."@en ;
rdfs:subClassOf obo:IDO_0000537 , obo:OBI_0100026 .
obo:IDO_0000039 a rdfs:Class ;
rdfs:label "_obsolete_symbiant"@en ;
rdfs:subClassOf .
obo:IDO_0000524 a rdfs:Class ;
rdfs:label "mutualist"@en ;
rdfs:comment "An organism bearing a mutualist role."@en ;
rdfs:subClassOf obo:IDO_0000522 , obo:OBI_0100026 .
obo:IDO_0000207 a rdfs:Class ;
rdfs:label "_obsolete_adhesin"@en ;
rdfs:subClassOf .
obo:BFO_0000028 a rdfs:Class ;
rdfs:label "three-dimensional spatial region"@en ;
rdfs:subClassOf obo:BFO_0000006 .
obo:CHEBI_23367 a rdfs:Class ;
rdfs:label "molecular entity" ;
rdfs:comment "Any constitutionally or isotopically distinct atom, molecule, ion, ion pair, radical, radical ion, complex, conformer etc., identifiable as a separately distinguishable entity." ;
rdfs:subClassOf obo:BFO_0000040 .
obo:IDO_0000643 a rdfs:Class ;
rdfs:label "re-emerging pathogen"@en ;
rdfs:comment "An infectious agent whose infection incidence is increasing in a host population as a result of changes in the biology of the host or pathogen, or changes in their interactions."@en ;
rdfs:subClassOf obo:IDO_0000596 .
obo:IDO_0000442 a rdfs:Class ;
rdfs:label "antibacterial disposition"@en ;
rdfs:comment "A disposition to kill or inhibit the reproduction of bacteria."@en ;
rdfs:subClassOf obo:BFO_0000016 .
obo:IDO_0000457 a rdfs:Class ;
rdfs:label "immunocompetent organism"@en ;
rdfs:comment "An organism that has immunocompetence."@en ;
rdfs:subClassOf obo:OBI_0100026 .
obo:IDO_0000663 a rdfs:Class ;
rdfs:label "negative regulation of life-sustaining process" ;
rdfs:comment "Any process that stops, prevents, or reduces the frequency, rate or extent of a life-sustaining process." ;
rdfs:subClassOf obo:GO_0065007 .
obo:RO_0002212 a rdf:Property ;
rdfs:label "negatively regulates"@en ;
rdfs:comment "x negatively regulates y if and only if the progression of x reduces the frequency, rate or extent of y" ;
rdfs:domain obo:BFO_0000015 ;
rdfs:range obo:BFO_0000015 ;
rdfs:subPropertyOf obo:RO_0002211 .
obo:IDO_0000610 a rdfs:Class ;
rdfs:label "immunosuppression"@en ;
rdfs:comment "A process that attenuates an immune response."@en ;
rdfs:subClassOf obo:BFO_0000015 .
obo:IDO_0000002 a rdfs:Class ;
rdfs:label "_obsolete_quality"@en ;
rdfs:subClassOf .
a rdfs:Class ;
rdfs:subClassOf obo:IAO_0000102 .
obo:BFO_0000142 a rdfs:Class ;
rdfs:label "one-dimensional continuant fiat boundary"@en ;
rdfs:subClassOf obo:BFO_0000140 .
obo:IDO_0000005 a rdfs:Class ;
rdfs:label "_obsolete_swollen"@en ;
rdfs:subClassOf .
obo:IDO_0000111 a rdfs:Class ;
rdfs:label "_obsolete_antigenic variation"@en ;
rdfs:subClassOf .
obo:IDO_0000214 a rdfs:Class ;
rdfs:label "_obsolete_refractoriness"@en ;
rdfs:subClassOf .
obo:IDO_0000603 a rdfs:Class ;
rdfs:label "process of establishing an infection"@en ;
rdfs:comment "A process by which an infectious agent, established in a host, becomes part of an infection in the host."@en ;
rdfs:subClassOf obo:BFO_0000015 .
a rdfs:Class ;
rdfs:subClassOf obo:IAO_0000102 .
obo:IDO_0000444 a rdfs:Class ;
rdfs:label "protective resistance"@en ;
rdfs:comment "A disposition that inheres in a material entity in virtue of the fact that the entity has a part (e.g. a gene product), which itself has a disposition to mitigate damage to the entity."@en ;
rdfs:subClassOf obo:BFO_0000016 .
obo:IDO_0000015 a rdfs:Class ;
rdfs:label "_obsolete_temperature"@en ;
rdfs:subClassOf .
obo:IDO_0000476 a rdfs:Class ;
rdfs:label "focal infection"@en ;
rdfs:comment "A local infection for which symptoms are observed in parts of the host's extended organism that are distant from the infection."@en ;
rdfs:subClassOf obo:IDO_0000475 .
obo:IDO_0000455 a rdfs:Class ;
rdfs:label "collective disposition"@en ;
rdfs:comment "A disposition that inheres in a collection of entities in virtue of the individual dispositions of the constituents of that collection. "@en ;
rdfs:subClassOf obo:BFO_0000016 .
obo:BFO_0000002 a rdfs:Class ;
rdfs:label "continuant"@en ;
rdfs:comment "An entity that exists in full at any time in which it exists at all, persists through time while maintaining its identity and has no temporal parts."@en ;
rdfs:subClassOf obo:BFO_0000001 .
obo:GO_0045087 a rdfs:Class ;
rdfs:label "innate immune response" ;
rdfs:comment "Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens." ;
rdfs:subClassOf obo:GO_0006955 .
obo:IDO_0000095 a rdfs:Class ;
rdfs:label "_obsolete_pathogen-induced necrosis"@en ;
rdfs:subClassOf .
obo:BFO_0000008 a rdfs:Class ;
rdfs:label "temporal region"@en ;
rdfs:subClassOf obo:BFO_0000003 .
obo:IDO_0000004 a rdfs:Class ;
rdfs:label "_obsolete_virulence"@en ;
rdfs:comment "'the degree of pathogenicitynnpathogenicity and virulence are used in some communities as synonyms.'-ID[O]:0000004: the degree of pathogenicitynnpathogenicity and virulence are used in some communities as synonyms."@en ;
rdfs:subClassOf .
obo:IDO_0000084 a rdfs:Class ;
rdfs:label "_obsolete_pathogenesis"@en ;
rdfs:comment "'GO:nthe specific processes that generate the ability of an organism to cause disease in anothernnnThis is defined in GO so import.'-ID[O]:0000084: GO:nthe specific processes that generate the ability of an organism to cause disease in anothernnnThis is defined in GO so import."@en ;
rdfs:subClassOf .
obo:IDO_0000659 a rdfs:Class ;
rdfs:label "susceptible organism" ;
rdfs:comment "An organism that is not infected with an infectious agent and lacks protective immunity to the infectious agent." ;
rdfs:subClassOf obo:OBI_0100026 .
obo:IDO_0000220 a rdfs:Class ;
rdfs:label "_obsolete_infectivity period"@en ;
rdfs:subClassOf .
obo:IDO_0000489 a rdfs:Class ;
rdfs:label "infectious disease mortality rate"@en ;
rdfs:comment "A quality that inheres in an organism population and is the per capita number of deaths in the population resulting from an infectious disease over a specified period of time."@en ;
rdfs:subClassOf obo:BFO_0000019 .
obo:IDO_0000498 a rdfs:Class ;
rdfs:label "active immunization against infectious agent"@en ;
rdfs:comment "An immunization that begins with exposure of an organism to antigen and results in immunity against an infectious agent."@en ;
rdfs:subClassOf obo:IDO_0000497 .
obo:IDO_0000590 a rdfs:Class ;
rdfs:label "chronic infectious disease course"@en ;
rdfs:comment "An infectious disease course that unfolds over a long period of time."@en ;
rdfs:subClassOf obo:IDO_0000495 .
obo:IDO_0000637 a rdfs:Class ;
rdfs:label "severe sepsis"@en ;
rdfs:comment "A sepsis that results in organ dysfunction, hypotension, or hypofusion of at least one organ."@en ;
rdfs:subClassOf obo:IDO_0000636 .
obo:IDO_0000416 a rdfs:Class ;
rdfs:label "infectious agent carrier role"@en ;
rdfs:comment "An infectious agent host role borne by an organism in virtue of the fact that its extended organism contains an infectious agent, the infectious agent has the infectious disposition towards the host, and the host has no symptoms of the infectious disease caused by the infectious agent."@en ;
rdfs:subClassOf obo:IDO_0000414 .
obo:IDO_0000578 a rdfs:Class ;
rdfs:label "humoral immunity to infectious agent"@en ;
rdfs:comment "An immunity to infectious agent that inheres in an organism in virtue of components of its circulating body fluid."@en ;
rdfs:subClassOf obo:IDO_0000448 .
obo:IDO_0000525 a rdfs:Class ;
rdfs:label "commensal"@en ;
rdfs:comment "An organism bearing a commensal role."@en ;
rdfs:subClassOf obo:IDO_0000522 , obo:OBI_0100026 .
obo:IDO_0000026 a rdfs:Class ;
rdfs:label "_obsolete_tropism"@en ;
rdfs:subClassOf .
obo:IDO_0000073 a rdfs:Class ;
rdfs:label "_obsolete_disruption of normal microbioflora"@en ;
rdfs:subClassOf .
obo:IDO_0000466 a rdfs:Class ;
rdfs:label "virulence"@en ;
rdfs:comment "A quality that inheres in an infectious agent and is the degree to which realizations of the infectious disease caused by the infectious agent become severe or fatal. "@en ;
rdfs:subClassOf obo:BFO_0000019 .
obo:IDO_0000626 a rdfs:Class ;
rdfs:label "appearance of disorder"@en ;
rdfs:comment "A process by which a disorder comes into existence."@en ;
rdfs:subClassOf obo:BFO_0000015 .
obo:RO_0002297 a rdf:Property ;
rdfs:label "results in formation of"@en ;
rdfs:range ;
rdfs:subPropertyOf obo:IDO_0000660 .
obo:IDO_0000567 a rdfs:Class ;
rdfs:label "secondary infection"@en ;
rdfs:comment "An infection bearing the secondary infection role."@en ;
rdfs:subClassOf obo:IDO_0000504 .
obo:IDO_0000206 a rdfs:Class ;
rdfs:label "_obsolete_biotic"@en ;
rdfs:subClassOf .
obo:GO_0050777 a rdfs:Class ;
rdfs:label "negative regulation of immune response" ;
rdfs:comment "Any process that stops, prevents, or reduces the frequency, rate or extent of the immune response, the immunological reaction of an organism to an immunogenic stimulus." ;
rdfs:subClassOf obo:GO_0065007 .
obo:OBI_0100026 a rdfs:Class ;
rdfs:label "organism"@en ;
rdfs:comment "A material entity that is an individual living system, such as animal, plant, bacteria or virus, that is capable of replicating or reproducing, growth and maintenance in the right environment. An organism may be unicellular or made up, like humans, of many billions of cells divided into specialized tissues and organs."@en ;
rdfs:subClassOf obo:BFO_0000040 .
obo:GO_0048525 a rdfs:Class ;
rdfs:label "negative regulation of viral process" ;
rdfs:comment "Any process that stops, prevents, or reduces the frequency, rate or extent of a multi-organism process in which a virus is a participant." ;
rdfs:subClassOf obo:GO_0065007 .
obo:IDO_0000460 a rdfs:Class ;
rdfs:label "infected organism"@en ;
rdfs:comment "An organism that has an infection in or on its extended organism."@en ;
rdfs:subClassOf obo:OBI_0100026 .
obo:IDO_0000088 a rdfs:Class ;
rdfs:label "_obsolete_membrane invagination"@en ;
rdfs:subClassOf .
obo:IDO_0000040 a rdfs:Class ;
rdfs:label "_obsolete_virulence factor"@en ;
rdfs:comment "'role played by a portion of substance to promote virulencennmagnitudendegree of pathogenesis'-ID[O]:0000040: role played by a portion of substance to promote virulencennmagnitudendegree of pathogenesis"@en ;
rdfs:subClassOf .
obo:IDO_0000536 a rdfs:Class ;
rdfs:label "parasite host"@en ;
rdfs:comment "An organism bearing a parasite host role."@en ;
rdfs:subClassOf obo:IDO_0000531 , obo:OBI_0100026 .
obo:IDO_0000557 a rdfs:Class ;
rdfs:label "adhesion factor"@en ;
rdfs:comment "A biological macromolecule that has an adhesion disposition."@en ;
rdfs:subClassOf obo:CHEBI_23367 .
obo:OGMS_0000031 a rdfs:Class ;
rdfs:label "disease" ;
rdfs:comment "A disposition (i) to undergo pathological processes that (ii) exists in an organism because of one or more disorders in that organism."@en ;
rdfs:subClassOf obo:BFO_0000016 .
obo:IDO_0000589 a rdfs:Class ;
rdfs:label "immunodeficient organism"@en ;
rdfs:comment "An organism that has an immunodeficiency."@en ;
rdfs:subClassOf obo:OBI_0100026 .
obo:IDO_0001011 a rdfs:Class ;
rdfs:label "immunosuppressed organism experiencing drug-based immunosuppression"@en ;
rdfs:comment "A pathologically immunosuppressed organism that is experiencing drug-based immunosuppression." ;
rdfs:subClassOf obo:IDO_0001005 .
obo:IDO_0000116 a rdfs:Class ;
rdfs:label "_obsolete_complement resistance"@en ;
rdfs:subClassOf .
obo:IDO_0000405 a rdfs:Class ;
rdfs:label "pathogen role"@en ;
rdfs:comment "A role borne by pathogen in virtue of the fact that it or one of its products is sufficiently close to an organism towards which it has the pathogenic disposition to allow realization of the pathogenic disposition."@en ;
rdfs:subClassOf obo:BFO_0000023 .
obo:IDO_0000547 a rdfs:Class ;
rdfs:label "virulence factor"@en ;
rdfs:comment "A biological macromolecule produced by a pathogen and that has a virulence factor disposition."@en ;
rdfs:subClassOf obo:CHEBI_23367 .
obo:IDO_0000008 a rdfs:Class ;
rdfs:label "_obsolete_contagious"@en ;
rdfs:subClassOf .
obo:IDO_0000471 a rdfs:Class ;
rdfs:label "complex infection"@en ;
rdfs:comment "An infection comprised of infectious organisms from different Species."@en ;
rdfs:subClassOf obo:IDO_0000586 .
obo:IDO_0000633 a rdfs:Class ;
rdfs:label "metatstatic infection"@en ;
rdfs:comment "An infection established as a result of spread from another infection in a non-adjacent location in the extended organism of the host."@en ;
rdfs:subClassOf obo:IDO_0000586 .
obo:IDO_0000551 a rdfs:Class ;
rdfs:label "enterotoxin"@en ;
rdfs:comment "A molecular entity with an exotoxin disposition, the realization of which damages cells of the host intestinal mucosa."@en ;
rdfs:subClassOf obo:IDO_0000550 .
obo:BFO_0000019 a rdfs:Class ;
rdfs:label "quality"@en ;
rdfs:subClassOf obo:BFO_0000020 .
obo:IDO_0000402 a rdfs:Class ;
rdfs:label "commensal role"@en ;
rdfs:comment "A symbiont role borne by an organism in virtue of the fact that it derives a growth, survival, or fitness advantage from symbiosis, but the other symbiont is neither advantaged nor disadvantaged."@en ;
rdfs:subClassOf obo:IDO_0000400 .
obo:IDO_0000427 a rdfs:Class ;
rdfs:label "exotoxin disposition"@en ;
rdfs:comment "A toxin disposition to damage cells or extracellular matrix by a direct enzymatic process."@en ;
rdfs:subClassOf obo:IDO_0000426 .
obo:IDO_0000434 a rdfs:Class ;
rdfs:label "primary infection role"@en ;
rdfs:comment "A role borne by an infectious disorder in virtue of the fact that (1) the host has at least two distinct infectious disorders, where neither arose from the other through metastasis, (2) at the time the infectious disorder was established in the host, the host had no infectious disorder, and (3) the infectious disorder increases the host's susceptibility to infectious disorders."@en ;
rdfs:subClassOf obo:BFO_0000023 .
obo:IDO_0000648 a rdfs:Class ;
rdfs:label "Shigellosis"@en ;
rdfs:comment "An infection located in the bowel and that has as part organisms of the Genus Shigella."@en ;
rdfs:subClassOf obo:IDO_0000586 .
obo:IDO_0000077 a rdfs:Class ;
rdfs:label "_obsolete_afimbrial specific adherence"@en ;
rdfs:subClassOf .
obo:IDO_0000509 a rdfs:Class ;
rdfs:label "organism population"@en ;
rdfs:comment "An aggregate of organisms of the same Species."@en ;
rdfs:subClassOf obo:BFO_0000027 .
obo:IDO_0000583 a rdfs:Class ;
rdfs:label "emerging pathogen"@en ;
rdfs:comment "An infectious agent whose infection incidence is increasing following its first introduction into a new host Species."@en ;
rdfs:subClassOf obo:IDO_0000596 .
obo:BFO_0000035 a rdfs:Class ;
rdfs:label "process boundary"@en ;
rdfs:comment "p is a process boundary =Def. p is a temporal part of a process & p has no proper temporal parts. (axiom label in BFO2 Reference: [084-001])"@en ;
rdfs:subClassOf obo:BFO_0000003 .
obo:IDO_0000594 a rdfs:Class ;
rdfs:label "direct host exposure to infectious agent"@en ;
rdfs:comment "A process in which a potential host of an infectious agent comes into direct physical contact with the infectious agent."@en ;
rdfs:subClassOf obo:IDO_0000658 .
obo:IDO_0000217 a rdfs:Class ;
rdfs:label "_obsolete_quality of infectious disease"@en ;
rdfs:subClassOf .
obo:IDO_0000101 a rdfs:Class ;
rdfs:label "_obsolete_emergence"@en ;
rdfs:comment "'the process by which an infectious disease establishes itself in a new population (or at a sufficiently higher rate? higher prevalence and/or higher incidence)'-ID[O]:0000101: the process by which an infectious disease establishes itself in a new population (or at a sufficiently higher rate? higher prevalence and/or higher incidence)"@en ;
rdfs:subClassOf .
obo:IDO_0000044 a rdfs:Class ;
rdfs:label "_obsolete_endotoxin"@en ;
rdfs:subClassOf .
obo:IDO_0000112 a rdfs:Class ;
rdfs:label "_obsolete_resist phagocytosis in subepithelial space"@en ;
rdfs:subClassOf .
obo:IDO_0000532 a rdfs:Class ;
rdfs:label "definitive host"@en ;
rdfs:comment "An organism bearing a definitive host role."@en ;
rdfs:subClassOf obo:IDO_0000531 , obo:OBI_0100026 .
obo:IDO_0000611 a rdfs:Class ;
rdfs:label "physiologic immunosuppression"@en ;
rdfs:comment "An immunosuppression which unfolds as part of the natural self-regulation of an immune response."@en ;
rdfs:subClassOf obo:IDO_0000610 .
obo:IDO_0000631 a rdfs:Class ;
rdfs:label "community-acquired infection"@en ;
rdfs:comment "An infection resulting from a transmission process that did not unfold in a health care facility."@en ;
rdfs:subClassOf obo:IDO_0000586 .
obo:IDO_0000493 a rdfs:Class ;
rdfs:label "infectious disease hyper-endemicity"@en ;
rdfs:comment "An infectious disease endemicity that inheres in an organism population in virtue of the fact that the infectious disease endemic level for an infectious disease is persistently high in the population. "@en ;
rdfs:subClassOf obo:IDO_0000490 .
obo:IDO_0000456 a rdfs:Class ;
rdfs:label "immunosuppressed organism"@en ;
rdfs:comment "An organism that is experiencing pregnancy-induced or pathologic immunosuppression."@en ;
rdfs:subClassOf obo:OBI_0100026 .
obo:IDO_0000503 a rdfs:Class ;
rdfs:label "infectious disease pandemic"@en ;
rdfs:comment "A process in which multiple infectious disease epidemics of the same type of infectious disease unfold over overlapping periods of time and affect organism populations located in different geographic regions, including different countries and continents."@en ;
rdfs:subClassOf obo:BFO_0000015 .
a rdfs:Class ;
rdfs:label "Obsolete Class" .
obo:IDO_0000543 a rdfs:Class ;
rdfs:label "vehicle of infectious agent"@en ;
rdfs:comment "A material entity bearing an infectious agent vehicle role."@en ;
rdfs:subClassOf obo:BFO_0000040 .
obo:IDO_0000514 a rdfs:Class ;
rdfs:label "susceptible population"@en ;
rdfs:comment "An organism population whose members are not infected with an infectious agent and who lack immunity to the infectious agent."@en ;
rdfs:subClassOf obo:IDO_0000509 .
obo:IDO_0000419 a rdfs:Class ;
rdfs:label "mechanical vector of infectious agent role"@en ;
rdfs:comment "An infectious agent vector role borne by an organism in virtue of the fact that the infectious agent does not multiply in or on the vector."@en ;
rdfs:subClassOf obo:IDO_0000418 .
obo:IDO_0000055 a rdfs:Class ;
rdfs:label "_obsolete_adhesion factor"@en ;
rdfs:comment "'role played by portion of physical substance utilized by an organism in order to establish adherence to a surface in a host'-ID[O]:0000055: role played by portion of physical substance utilized by an organism in order to establish adherence to a surface in a host"@en ;
rdfs:subClassOf .
obo:IDO_0000651 a rdfs:Class ;
rdfs:label "primary immunodeficiency" ;
rdfs:comment "An immunodeficiency that exists in an organism because of a genetic predisposition." ;
rdfs:subClassOf obo:IDO_0000617 .
obo:IDO_0000604 a rdfs:Class ;
rdfs:label "colonization of host"@en ;
rdfs:comment "An establishment of localization in host process in which an organism establishes itself in a host."@en ;
rdfs:subClassOf obo:IDO_0000625 .
obo:IDO_0000572 a rdfs:Class ;
rdfs:label "chronic carrier of infectious agent"@en ;
rdfs:comment "An organism who has been bearer of the infectious agent carrier role for an extended period of time."@en ;
rdfs:subClassOf obo:IDO_0000539 .
obo:IDO_0000105 a rdfs:Class ;
rdfs:label "_obsolete_infection treatment process"@en ;
rdfs:subClassOf .
obo:IDO_0000228 a rdfs:Class ;
rdfs:label "_obsolete_pathogen outbreak"@en ;
rdfs:subClassOf .
obo:IDO_0000033 a rdfs:Class ;
rdfs:label "_obsolete_morbidity"@en ;
rdfs:subClassOf .
obo:BFO_0000020 a rdfs:Class ;
rdfs:label "specifically dependent continuant"@en ;
rdfs:comment "A continuant that inheres in or is borne by other entities. Every instance of A requires some specific instance of B which must always be the same."@en ;
rdfs:subClassOf obo:BFO_0000002 .
obo:IDO_0000091 a rdfs:Class ;
rdfs:label "_obsolete_engulfment by phagocyte"@en ;
rdfs:subClassOf .
obo:IDO_0000568 a rdfs:Class ;
rdfs:label "zoonosis"@en ;
rdfs:comment "An infectious disease that has as its physical basis an infectious disorder composed of infectious agents that have a zoonotic disposition."@en ;
rdfs:subClassOf obo:IDO_0000436 .
obo:IDO_0000644 a rdfs:Class ;
rdfs:label "pregnancy-induced immunosuppression"@en ;
rdfs:comment "An immunosuppression induced by progesterone and other factors upregulated in pregnant women."@en ;
rdfs:subClassOf obo:IDO_0000610 .
obo:IDO_0000011 a rdfs:Class ;
rdfs:label "_obsolete_exogenous"@en ;
rdfs:subClassOf .
obo:IDO_0000010 a rdfs:Class ;
rdfs:label "_obsolete_immunosuppressed"@en ;
rdfs:subClassOf .
obo:NCBITaxon_2759 a rdfs:Class ;
rdfs:label "Eukaryota" ;
rdfs:subClassOf obo:OBI_0100026 .
obo:GO_0000003 a rdfs:Class ;
rdfs:label "reproduction" ;
rdfs:comment "The production of new individuals that contain some portion of genetic material inherited from one or more parent organisms." ;
rdfs:subClassOf obo:GO_0008150 .
obo:IDO_0000021 a rdfs:Class ;
rdfs:label "_obsolete_infected"@en ;
rdfs:subClassOf .
obo:IDO_0000301 a rdfs:Class ;
rdfs:label "_obsolete_rapid progression"@en ;
rdfs:subClassOf .
obo:IDO_0000066 a rdfs:Class ;
rdfs:label "_obsolete_infectious agent"@en ;
rdfs:subClassOf .
obo:IDO_0001008 a rdfs:Class ;
rdfs:label "immunosuppressed human experiencing HIV-based immunosuppression"@en ;
rdfs:comment "An immunosuppressed organism that is a human experiencing HIV-based immunosuppression." ;
rdfs:subClassOf obo:IDO_0001007 .
obo:GO_0042101 a rdfs:Class ;
rdfs:label "T cell receptor complex" ;
rdfs:comment "A protein complex that contains a disulfide-linked heterodimer of T cell receptor (TCR) chains, which are members of the immunoglobulin superfamily, and mediates antigen recognition, ultimately resulting in T cell activation. The TCR heterodimer is associated with the CD3 complex, which consists of the nonpolymorphic polypeptides gamma, delta, epsilon, zeta, and, in some cases, eta (an RNA splice variant of zeta) or Fc epsilon chains." ;
rdfs:subClassOf obo:GO_0032991 .
obo:IDO_0000666 a rdfs:Class ;
rdfs:label "human pathogenicity disposition"@en ;
rdfs:comment "A disposition to initiate processes that result in a disorder in a human organism." ;
rdfs:subClassOf obo:IDO_0000450 .
obo:IDO_0000410 a rdfs:Class ;
rdfs:label "intermediate host role"@en ;
rdfs:comment "A symbiont host role borne by an organism in virtue of the fact that its partner in symbiosis utilizes the host to undergo a developmental stage transition, and the host is required for continuation of the partner's life cycle."@en ;
rdfs:subClassOf obo:IDO_0000408 .
obo:IDO_0000499 a rdfs:Class ;
rdfs:label "vaccination against infectious agent"@en ;
rdfs:comment "An active immunization that begins with exposure of an organism to a vaccine."@en ;
rdfs:subClassOf obo:IDO_0000498 .
obo:GO_0032991 a rdfs:Class ;
rdfs:label "macromolecular complex" ;
rdfs:comment "A stable assembly of two or more macromolecules, i.e. proteins, nucleic acids, carbohydrates or lipids, in which at least one component is a protein and the constituent parts function together." ;
rdfs:subClassOf obo:BFO_0000040 .
obo:OGMS_0000020 a rdfs:Class ;
rdfs:label "symptom" ;
rdfs:comment "A quality of a patient that is observed by the patient or a processual entity experienced by the patient, either of which is hypothesized by the patient to be a realization of a disease."@en ;
rdfs:subClassOf obo:BFO_0000001 .
obo:IDO_0000655 a rdfs:Class ;
rdfs:label "transmissibility disposition" ;
rdfs:comment "A disposition to undergo a transmission process." ;
rdfs:subClassOf obo:BFO_0000016 .
obo:IDO_0000025 a rdfs:Class ;
rdfs:label "_obsolete_pathogenicity"@en ;
rdfs:comment "'the ability of the biotic entity to cause disease in a host of a given typenndo we need to say damage instead of disease?nnpathogenicity and virulence are used as synonyms in some communities'-ID[O]:0000025: the ability of the biotic entity to cause disease in a host of a given typenndo we need to say damage instead of disease?nnpathogenicity and virulence are used as synonyms in some communities"@en ;
rdfs:subClassOf .
obo:IDO_0000579 a rdfs:Class ;
rdfs:label "leukocyte-mediated immunity to infectious agent"@en ;
rdfs:comment "An immunity to infectious agent that inheres in an organism in virtue of its leukocytes."@en ;
rdfs:subClassOf obo:IDO_0000448 .
obo:IDO_0000561 a rdfs:Class ;
rdfs:label "antiparasitic"@en ;
rdfs:comment "A material entity bearing an antiparasitic disposition."@en ;
rdfs:subClassOf obo:BFO_0000040 .
obo:IDO_0000615 a rdfs:Class ;
rdfs:label "colony"@en ;
rdfs:comment "An organism population persisting in a site it has colonized."@en ;
rdfs:subClassOf obo:IDO_0000509 .
obo:IDO_0000019 a rdfs:Class ;
rdfs:label "_obsolete_prevalence"@en ;
rdfs:comment "'total number of cases of a particular disease at a given time in a particular population divided by the number of individuals in that particular populationnnthe burden of a disease in a population'-ID[O]:0000019: total number of cases of a particular disease at a given time in a particular population divided by the number of individuals in that particular populationnnthe burden of a disease in a population"@en ;
rdfs:subClassOf .
obo:IDO_0000421 a rdfs:Class ;
rdfs:label "infectious agent vehicle role"@en ;
rdfs:comment "An infectious agent transporter role borne by an entity in virtue of the fact that the entity is not a complete organism."@en ;
rdfs:subClassOf obo:IDO_0000417 .
obo:IDO_0000459 a rdfs:Class ;
rdfs:label "colonized host"@en ;
rdfs:comment "An organism that contains a colony in or on its extended organism."@en ;
rdfs:subClassOf obo:OBI_0100026 .
obo:IDO_0000506 a rdfs:Class ;
rdfs:label "bacteremia"@en ;
rdfs:comment "An infection that has as part bacteria located in the blood."@en ;
rdfs:subClassOf obo:IDO_0000472 , obo:IDO_0000586 .
obo:IDO_0000080 a rdfs:Class ;
rdfs:label "_obsolete_penetration via injury of epithelial barrier"@en ;
rdfs:subClassOf .
obo:IDO_0000109 a rdfs:Class ;
rdfs:label "_obsolete_transport by lymph"@en ;
rdfs:subClassOf .
obo:IDO_0000051 a rdfs:Class ;
rdfs:label "_obsolete_therapeutic"@en ;
rdfs:subClassOf .
obo:IDO_0000000 a rdfs:Class ;
rdfs:label "_obsolete_process"@en ;
rdfs:subClassOf .
obo:IDO_0000424 a rdfs:Class ;
rdfs:label "reservoir of infectious agent role"@en ;
rdfs:comment "A role borne by a material entity in virtue of the fact that it is a habitat in which infectious agents can persist and multiply and from which they can be transmitted in virtue of prevailing practices of potential hosts."@en ;
rdfs:subClassOf obo:BFO_0000023 .
obo:GO_0006955 a rdfs:Class ;
rdfs:label "immune response" ;
rdfs:comment "Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat." ;
rdfs:subClassOf obo:GO_0008150 .
obo:IDO_0000003 a rdfs:Class ;
rdfs:label "_obsolete_object"@en ;
rdfs:subClassOf .
obo:IDO_0000443 a rdfs:Class ;
rdfs:label "antiparasitic disposition"@en ;
rdfs:comment "A disposition to kill or inhibit the development or reproduction of eukaryotic parasites."@en ;
rdfs:subClassOf obo:BFO_0000016 .
obo:IDO_0000640 a rdfs:Class ;
rdfs:label "acquired immunodeficiency"@en ;
rdfs:comment "An immunodeficiency that is not caused by a genetic predisposition."@en ;
rdfs:subClassOf obo:IDO_0000617 .
obo:IDO_0000408 a rdfs:Class ;
rdfs:label "symbiont host role"@en ;
rdfs:comment "A host role borne by an organism in virtue of the fact that its extended organism contains a second organism and provides an environment supportive for the survival, growth, maturation, or reproduction of that organism. "@en ;
rdfs:subClassOf obo:IDO_0000629 .
obo:IDO_0000600 a rdfs:Class ;
rdfs:label "release of infectious human pathogen in laboratory"@en ;
rdfs:comment "A host exposure to environment with infectious agent where the exposure is accidental; the environment is a laboratory, and the infectious agent is infectious in humans."@en ;
rdfs:subClassOf obo:IDO_0000597 .
obo:IDO_0000445 a rdfs:Class ;
rdfs:label "resistance to drug"@en ;
rdfs:comment "A protective resistance that mitigates the damaging effects of a drug."@en ;
rdfs:subClassOf obo:IDO_0000444 .
obo:IDO_0000413 a rdfs:Class ;
rdfs:label "parasite host role"@en ;
rdfs:comment "A symbiont host role borne by an organism in virtue of the fact that its partner in symbiosis derives from the host a growth, survival, or fitness advantage while the host's growth, survival, or fitness is reduced."@en ;
rdfs:subClassOf obo:IDO_0000408 .
obo:IDO_0000230 a rdfs:Class ;
rdfs:label "_obsolete_vertical transmission"@en ;
rdfs:subClassOf .
obo:IDO_0000482 a rdfs:Class ;
rdfs:label "infection incidence proportion"@en ;
rdfs:comment "A quality that inheres in an organism population and is the proportion of members of the population not infected at the beginning of a specified period of time who become infected during the specified period of time. "@en ;
rdfs:subClassOf obo:BFO_0000019 .
obo:IDO_0000454 a rdfs:Class ;
rdfs:label "reverse zoonotic disposition"@en ;
rdfs:comment "An infectious disposition that is the disposition to be transmitted from an infected, human host to a non-human host."@en ;
rdfs:subClassOf obo:IDO_0000452 .
obo:GO_0085031 a rdfs:Class ;
rdfs:label "commensalism" ;
rdfs:comment "An interaction between two organisms living together in more or less intimate association in a relationship in which one benefits and the other is unaffected." ;
rdfs:subClassOf obo:GO_0044403 .
obo:IDO_0000477 a rdfs:Class ;
rdfs:label "acute infectious disease course"@en ;
rdfs:comment "An infectious disease course that begins soon after infection is established and progresses rapidly to severe stages."@en ;
rdfs:subClassOf obo:IDO_0000495 .
obo:IDO_0000231 a rdfs:Class ;
rdfs:label "_obsolete_horizontal transmission"@en ;
rdfs:subClassOf .
obo:IDO_0000662 a rdfs:Class ;
rdfs:label "life-sustaining process" ;
rdfs:comment "A process which is necessary for the survival of an organism." ;
rdfs:subClassOf obo:GO_0008150 .
obo:IDO_0000622 a rdfs:Class ;
rdfs:label "disposition to form a non-parasitic colony"@en ;
rdfs:comment "A disposition to colonize an organism and participate in mutualism or commensalism with that organism."@en ;
rdfs:subClassOf obo:BFO_0000016 .
obo:IDO_0000062 a rdfs:Class ;
rdfs:label "_obsolete_pathogenicity island"@en ;
rdfs:subClassOf .
obo:IDO_0000414 a rdfs:Class ;
rdfs:label "infectious agent host role"@en ;
rdfs:comment "A pathogen host role borne by an organism in virtue of the fact that its extended organism contains an infectious agent."@en ;
rdfs:subClassOf obo:IDO_0000415 .
obo:IDO_0000649 a rdfs:Class ;
rdfs:label "amebiasis"@en ;
rdfs:comment "An infection located in the colon and that has as part organisms of the Species Entamoeba histolytica"@en ;
rdfs:subClassOf obo:IDO_0000586 .
obo:IAO_0000102 a rdfs:Class ;
rdfs:label "data about an ontology part"@en ;
rdfs:comment "data about an ontology part is a data item about a part of an ontology, for example a term"@en ;
rdfs:subClassOf obo:IAO_0000027 .
obo:IDO_0000508 a rdfs:Class ;
rdfs:label "virion"@en ;
rdfs:comment "A virus that is in its assembled state consisting of genomic material (DNA or RNA) surrounded by coating molecules."@en ;
rdfs:subClassOf obo:NCBITaxon_10239 .
obo:IDO_0000548 a rdfs:Class ;
rdfs:label "invasion factor"@en ;
rdfs:comment "A biological macromolecule that has an invasion disposition."@en ;
rdfs:subClassOf obo:CHEBI_23367 .
obo:OGMS_0000063 a rdfs:Class ;
rdfs:label "disease course" ;
rdfs:comment "The totality of all processes through which a given disease instance is realized."@en ;
rdfs:subClassOf obo:BFO_0000015 .
obo:IDO_0000036 a rdfs:Class ;
rdfs:label "_obsolete_colonizer"@en ;
rdfs:subClassOf .
obo:IDO_0000552 a rdfs:Class ;
rdfs:label "endotoxin"@en ;
rdfs:comment "A molecular entity with a toxin disposition and that is a structural component of a pathogen and is released from the pathogen only upon cytolysis."@en ;
rdfs:subClassOf obo:IDO_0000549 .
obo:IDO_0000609 a rdfs:Class ;
rdfs:label "colonization of human anterior nares"@en ;
rdfs:comment "A colonization of human process in which the colonized site is the anterior nares."@en ;
rdfs:subClassOf obo:IDO_0000650 .
obo:IDO_0000639 a rdfs:Class ;
rdfs:label "infectious human pathogen"@en ;
rdfs:comment "An infectious agent with a capability to infect human hosts."@en ;
rdfs:subClassOf obo:IDO_0000596 .
obo:IDO_0000047 a rdfs:Class ;
rdfs:label "_obsolete_treatment"@en ;
rdfs:subClassOf .
obo:IDO_0000562 a rdfs:Class ;
rdfs:label "antibacterial"@en ;
rdfs:comment "A material entity bearing an antibacterial disposition."@en ;
rdfs:subClassOf obo:BFO_0000040 .
obo:GO_0044406 a rdfs:Class ;
rdfs:label "adhesion of symbiont to host" ;
rdfs:comment "The attachment of a symbiont to its host via adhesion molecules, general stickiness etc., either directly or indirectly. The host is defined as the larger of the organisms involved in a symbiotic interaction." ;
rdfs:subClassOf obo:GO_0008150 .
obo:IDO_0000115 a rdfs:Class ;
rdfs:label "_obsolete_genetic diversification"@en ;
rdfs:subClassOf .
obo:IDO_0000425 a rdfs:Class ;
rdfs:label "virulence factor disposition"@en ;
rdfs:comment "A disposition borne by a biological macromolecule produced by a pathogen that is a disposition to undergo processes that increase the pathogen's virulence."@en ;
rdfs:subClassOf obo:BFO_0000016 .
obo:IDO_0000071 a rdfs:Class ;
rdfs:label "_obsolete_initiation of infection"@en ;
rdfs:subClassOf .
obo:IDO_0000526 a rdfs:Class ;
rdfs:label "parasite"@en ;
rdfs:comment "A organism bearing a parasite role."@en ;
rdfs:subClassOf obo:IDO_0000522 , obo:OBI_0100026 .
obo:IDO_0000210 a rdfs:Class ;
rdfs:label "_obsolete_quality of host"@en ;
rdfs:subClassOf .
obo:IDO_0000029 a rdfs:Class ;
rdfs:label "_obsolete_incidence"@en ;
rdfs:comment "'number of new cases in a given period of time'-ID[O]:0000029: number of new cases in a given period of time"@en ;
rdfs:subClassOf .
obo:IDO_0000417 a rdfs:Class ;
rdfs:label "infectious agent transporter role"@en ;
rdfs:comment "A role borne by a material entity in virtue of the fact that an infectious agent is located in or on the entity and the entity has the capability to transfer (either actively or passively) the infectious agent from one location to another. "@en ;
rdfs:subClassOf obo:BFO_0000023 .
obo:IDO_0000627 a rdfs:Class ;
rdfs:label "acute infection"@en ;
rdfs:comment "An infectious disorder that is the physical basis for an unfolding acute infectious disease course."@en ;
rdfs:subClassOf obo:IDO_0000504 .
obo:IDO_0000617 a rdfs:Class ;
rdfs:label "immunodeficiency"@en ;
rdfs:comment "A disorder of an immune system component that results in defective functioning of the immune system."@en ;
rdfs:subClassOf obo:OGMS_0000045 .
obo:IDO_0000406 a rdfs:Class ;
rdfs:label "opportunistic infectious disposition"@en ;
rdfs:comment "An infectious disposition to become part of a disorder only in organisms whose defenses are compromised."@en ;
rdfs:subClassOf obo:IDO_0000452 .
obo:IDO_0000667 a rdfs:Class ;
rdfs:label "parasitic disposition"@en ;
rdfs:comment "A disposition to participate in a process of symbiosis in which the bearer derives a growth, survival, or fitness advantage from symbiosis while the other symbiont's growth, survival, or fitness is reduced." ;
rdfs:subClassOf obo:BFO_0000016 .
obo:IDO_0000054 a rdfs:Class ;
rdfs:label "_obsolete_colonization factor"@en ;
rdfs:comment "'role played by portion of physical substance which promotes colonization'-ID[O]:0000054: role played by portion of physical substance which promotes colonization"@en ;
rdfs:subClassOf .
obo:IDO_0000458 a rdfs:Class ;
rdfs:label "contagiousness"@en ;
rdfs:comment "A disposition that inheres in a host of infectious agent and is a disposition to transmit infectious agents to organisms of the same Species through casual contact with a high likelihood of realization."@en ;
rdfs:subClassOf obo:BFO_0000016 .
obo:IDO_0000430 a rdfs:Class ;
rdfs:label "infectious agent portal of entry role"@en ;
rdfs:comment "A role borne by an anatomical entity in virtue of the fact that it serves as the site through which an infectious agent enters a host."@en ;
rdfs:subClassOf obo:BFO_0000023 .
obo:IDO_0000018 a rdfs:Class ;
rdfs:label "_obsolete_pandemic"@en ;
rdfs:subClassOf .
obo:IDO_0000065 a rdfs:Class ;
rdfs:label "_obsolete_dependovirus"@en ;
rdfs:subClassOf .
obo:IDO_0000588 a rdfs:Class ;
rdfs:label "collective resistance disposition"@en ;
rdfs:comment "A collective disposition the realization of which mitigates the damaging effects of some entity on members of the collection."@en ;
rdfs:subClassOf obo:IDO_0000455 .
obo:IDO_0000428 a rdfs:Class ;
rdfs:label "enterotoxin disposition"@en ;
rdfs:comment "An exotoxin disposition to damage cells of the host intestinal mucosa."@en ;
rdfs:subClassOf obo:IDO_0000427 , .
obo:IDO_0000469 a rdfs:Class ;
rdfs:label "drug susceptibility"@en ;
rdfs:comment "A susceptibility that is the degree to which an entity can be harmed or inhibited from surviving by a drug."@en ;
rdfs:subClassOf obo:IDO_0000467 .
obo:IDO_0000577 a rdfs:Class ;
rdfs:label "_obsolete_adaptive immunity to infectious agent"@en ;
rdfs:comment "An immunity to infectious agent realized in an adaptive immune response."@en ;
rdfs:subClassOf .
obo:IDO_0000537 a rdfs:Class ;
rdfs:label "infectious agent host"@en ;
rdfs:comment "An organism bearing an infectious agent host role."@en ;
rdfs:subClassOf obo:IDO_0000538 , obo:OBI_0100026 .
obo:IDO_0000448 a rdfs:Class ;
rdfs:label "immunity to infectious agent"@en ;
rdfs:comment "A resistance to infectious agent that inheres in an organism in virtue of immune system components in the extended organism."@en ;
rdfs:subClassOf obo:IDO_0000446 .
obo:IDO_0000645 a rdfs:Class ;
rdfs:label "candidiasis"@en ;
rdfs:comment "An infection that has as part organisms of the Genus Candida."@en ;
rdfs:subClassOf obo:IDO_0000586 .
obo:BFO_0000148 a rdfs:Class ;
rdfs:label "zero-dimensional temporal region"@en ;
rdfs:subClassOf obo:BFO_0000008 .
obo:IDO_0000079 a rdfs:Class ;
rdfs:label "_obsolete_penetration of epithelial barrier"@en ;
rdfs:subClassOf .
obo:IDO_0000591 a rdfs:Class ;
rdfs:label "_obsolete_communicable disposition"@en ;
rdfs:comment "An infectious disposition to be transmitted directly from one human host to another."@en ;
rdfs:subClassOf .
obo:IDO_0000043 a rdfs:Class ;
rdfs:label "_obsolete_toxin"@en ;
rdfs:subClassOf .
obo:IDO_0000566 a rdfs:Class ;
rdfs:label "primary infection"@en ;
rdfs:comment "An infection bearing the primary infection role."@en ;
rdfs:subClassOf obo:IDO_0000504 .
obo:IDO_0000221 a rdfs:Class ;
rdfs:label "_obsolete_infectious disease progression"@en ;
rdfs:comment "'the unfolding or course of infectious diseasennwhat do we say about infectious disease that always remain latent nwhat about when a pathogen continues its progression nnwe need to think about whether we need a term called stagenlife cycle?nprogression?ndevelopment?'-ID[O]:0000221: the unfolding or course of infectious diseasennwhat do we say about infectious disease that always remain latent nwhat about when a pathogen continues its progression nnwe need to think about whether we need a term called stagenlife cycle?nprogression?ndevelopment?"@en ;
rdfs:subClassOf .
obo:IDO_0000488 a rdfs:Class ;
rdfs:label "infectious agent seroprevalence"@en ;
rdfs:comment "A quality that inheres in an organism population and is the number of organisms in the population that have antibody specific for an infectious agent in their serum at a specified time."@en ;
rdfs:subClassOf obo:BFO_0000019 .
obo:IDO_0000605 a rdfs:Class ;
rdfs:label "_obsolete_biological object colony"@en ;
rdfs:comment "A biological object or group of biological objects in close spatial proximity."@en ;
rdfs:subClassOf .
obo:IDO_0001009 a rdfs:Class ;
rdfs:label "drug-based immunosuppression"@en ;
rdfs:comment "A pathologic immunosuppression process which arises as the result of treatment with a drug that attenuates immune responses." ;
rdfs:subClassOf obo:IDO_0000612 .
obo:IDO_0000302 a rdfs:Class ;
rdfs:label "_obsolete_long-term non-progression"@en ;
rdfs:subClassOf .
obo:IDO_0001014 a rdfs:Class ;
rdfs:label "immunosuppressed human experiencing drug-based immunosuppression due to organ transplant"@en ;
rdfs:comment "A pathologically immunosuppressed organism that is a human experiencing drug-based immunosuppression." ;
rdfs:subClassOf obo:IDO_0001011 .
obo:IDO_0000544 a rdfs:Class ;
rdfs:label "fomite"@en ;
rdfs:comment "A material entity bearing a fomite role."@en ;
rdfs:subClassOf obo:BFO_0000040 , obo:IDO_0000543 .
obo:IDO_0000472 a rdfs:Class ;
rdfs:label "extracellular infection"@en ;
rdfs:comment "An infection for which the infectious agents that are part of the infection persist in the extracellular space of the host."@en ;
rdfs:subClassOf obo:IDO_0000586 .
obo:IDO_0000032 a rdfs:Class ;
rdfs:label "_obsolete_attenuated"@en ;
rdfs:subClassOf .
obo:IDO_0000606 a rdfs:Class ;
rdfs:label "establishment of a clinically abnormal colony"@en ;
rdfs:comment "A colonization of host process that results in a clinically abnormal colony."@en ;
rdfs:subClassOf obo:IDO_0000604 .
obo:IDO_0000447 a rdfs:Class ;
rdfs:label "herd immunity to infectious organism"@en ;
rdfs:comment "A collective resistance disposition that inheres in an organism population in virtue of the fact that the proportion of the population with immunity to an infectious agent is high resulting in a low number of transmissions from hosts in the population to susceptible individuals in the population and thereby mitigating the damaging effects of the infectious agent on the population."@en ;
rdfs:subClassOf obo:IDO_0000588 .
obo:IDO_0000511 a rdfs:Class ;
rdfs:label "infected population"@en ;
rdfs:comment "An organism population whose members have an infection."@en ;
rdfs:subClassOf obo:IDO_0000509 .
obo:GO_0051234 a rdfs:Class ;
rdfs:label "establishment of localization" ;
rdfs:comment "Any process that localizes a substance or cellular component. This may occur via movement, tethering or selective degradation." ;
rdfs:subClassOf obo:GO_0008150 .
obo:IDO_0000007 a rdfs:Class ;
rdfs:label "_obsolete_active"@en ;
rdfs:subClassOf .
obo:BFO_0000003 a rdfs:Class ;
rdfs:label "occurrent"@en ;
rdfs:comment "An entity that has temporal parts and that happens, unfolds or develops through time."@en ;
rdfs:subClassOf obo:BFO_0000001 .
obo:IDO_0000584 a rdfs:Class ;
rdfs:label "cytotoxin"@en ;
rdfs:comment "A molecular entity with a toxin disposition, the realization of which damages host cells."@en ;
rdfs:subClassOf obo:IDO_0000549 .
obo:IDO_0000504 a rdfs:Class ;
rdfs:label "infectious disorder"@en ;
rdfs:comment "An infection that is clinically abnormal."@en ;
rdfs:subClassOf obo:IDO_0000586 , obo:OGMS_0000045 .
obo:OGMS_0000045 a rdfs:Class ;
rdfs:label "disorder" ;
rdfs:comment "A material entity which is clinically abnormal and part of an extended organism. Disorders are the physical basis of disease."@en ;
rdfs:subClassOf obo:BFO_0000040 .
obo:IDO_0000022 a rdfs:Class ;
rdfs:label "_obsolete_live"@en ;
rdfs:subClassOf .
obo:IDO_0001004 a rdfs:Class ;
rdfs:label "HIV-based immunosuppression"@en ;
rdfs:comment "An infection-based immunosuppression process which arises as the result of an HIV infection." ;
rdfs:subClassOf obo:IDO_0001003 .
obo:IDO_0000533 a rdfs:Class ;
rdfs:label "intermediate host"@en ;
rdfs:comment "A organism bearing an intermediate host role."@en ;
rdfs:subClassOf obo:IDO_0000531 , obo:OBI_0100026 .
obo:IDO_0000403 a rdfs:Class ;
rdfs:label "parasite role"@en ;
rdfs:comment "A symbiont role borne by an organism in virtue of the fact that it derives a growth, survival, or fitness advantage from symbiosis while the other symbiont's growth, survival, or fitness is reduced."@en ;
rdfs:subClassOf obo:IDO_0000400 .
obo:IDO_0000573 a rdfs:Class ;
rdfs:label "symptomatic host of infectious agent"@en ;
rdfs:comment "An organism who is host to an infectious agent and has symptoms of the infectious disease associated with the infectious agent"@en ;
rdfs:subClassOf obo:IDO_0000537 .
obo:IDO_0000305 a rdfs:Class ;
rdfs:label "_obsolete_co-infected"@en ;
rdfs:subClassOf .
obo:IDO_0000069 a rdfs:Class ;
rdfs:label "_obsolete_primary pathogen"@en ;
rdfs:subClassOf .
obo:IDO_0000058 a rdfs:Class ;
rdfs:label "_obsolete_chronic carrier"@en ;
rdfs:subClassOf .
obo:GO_0019814 a rdfs:Class ;
rdfs:label "immunoglobulin complex" ;
rdfs:comment "A protein complex that in its canonical form is composed of two identical immunoglobulin heavy chains and two identical immunoglobulin light chains, held together by disulfide bonds and sometimes complexed with additional proteins. An immunoglobulin complex may be embedded in the plasma membrane or present in the extracellular space, in mucosal areas or other tissues, or circulating in the blood or lymph." ;
rdfs:subClassOf obo:GO_0032991 .
obo:IDO_0000119 a rdfs:Class ;
rdfs:label "_obsolete_vaccination"@en ;
rdfs:subClassOf .
obo:IDO_0001010 a rdfs:Class ;
rdfs:label "chronic systemic steroid use-based immunosuppression"@en ;
rdfs:comment "A drug-based immunosuppression process that results from chronic systemic steroid use." ;
rdfs:subClassOf obo:IDO_0001009 .
obo:IDO_0000227 a rdfs:Class ;
rdfs:label "_obsolete_dormancy period"@en ;
rdfs:comment "'is a period a process?'-ID[O]:0000227: is a period a process?"@en ;
rdfs:subClassOf .
obo:BFO_0000018 a rdfs:Class ;
rdfs:label "zero-dimensional spatial region"@en ;
rdfs:subClassOf obo:BFO_0000006 .
obo:IDO_0000496 a rdfs:Class ;
rdfs:label "long-term non-progressing infectious disease course"@en ;
rdfs:comment "A chronic infectious disease course that does not progress to severe stages for a long period of time."@en ;
rdfs:subClassOf obo:IDO_0000590 .
obo:IDO_0000433 a rdfs:Class ;
rdfs:label "antiseptic role"@en ;
rdfs:comment "A role borne by a material entity in virtue of the fact that it has an antimicrobial disposition and is applied to an anatomical entity of a living organism. "@en ;
rdfs:subClassOf obo:BFO_0000023 .
obo:IDO_0001005 a rdfs:Class ;
rdfs:label "pathologically immunosuppressed organism"@en ;
rdfs:comment "An immunosuppressed organism that is experiencing pathologic immunosuppression." ;
rdfs:subClassOf obo:IDO_0000456 .
obo:IDO_0000232 a rdfs:Class ;
rdfs:label "_obsolete_pathogen life cycle stage"@en ;
rdfs:subClassOf .
obo:IDO_0000612 a rdfs:Class ;
rdfs:label "pathologic immunosuppression"@en ;
rdfs:comment "An immunosuppression process which arises as the result of a disorder."@en ;
rdfs:subClassOf obo:IDO_0000610 .
obo:IDO_0000515 a rdfs:Class ;
rdfs:label "normal resident microbiota population"@en ;
rdfs:comment "An organism population whose members are participating in non-parasitic symbiosis with a particular host."@en ;
rdfs:subClassOf obo:IDO_0000509 .
obo:IDO_0000461 a rdfs:Class ;
rdfs:label "co-infected organism"@en ;
rdfs:comment "An organism that has two infections with distinct Species of infectious agents."@en ;
rdfs:subClassOf obo:IDO_0000460 .
obo:IDO_0000553 a rdfs:Class ;
rdfs:label "infectious agent portal of entry"@en ;
rdfs:comment "An anatomical entity bearing an infectious agent portal of entry role."@en ;
rdfs:subClassOf obo:CARO_0000000 .
obo:IDO_0000092 a rdfs:Class ;
rdfs:label "_obsolete_damaging host cells and tissues in subepithelial space"@en ;
rdfs:subClassOf .
obo:IDO_0000093 a rdfs:Class ;
rdfs:label "_obsolete_induction of damaging host immune response"@en ;
rdfs:subClassOf .
obo:BFO_0000140 a rdfs:Class ;
rdfs:label "continuant fiat boundary"@en ;
rdfs:comment "b is a continuant fiat boundary = Def. b is an immaterial entity that is of zero, one or two dimensions and does not include a spatial region as part. (axiom label in BFO2 Reference: [029-001])"@en ;
rdfs:subClassOf obo:BFO_0000141 .
obo:IDO_0000087 a rdfs:Class ;
rdfs:label "_obsolete_fusion with host cell membrane"@en ;
rdfs:subClassOf .
obo:IDO_0000216 a rdfs:Class ;
rdfs:label "_obsolete_herd immunity"@en ;
rdfs:subClassOf .
obo:IDO_0000420 a rdfs:Class ;
rdfs:label "biological vector of infectious agent role"@en ;
rdfs:comment "An infectious agent vector role borne by an organism in virtue of the fact that the infectious agent multiplies in the vector."@en ;
rdfs:subClassOf obo:IDO_0000418 .
obo:IDO_0000601 a rdfs:Class ;
rdfs:label "host coming into contact with vector of infectious agent"@en ;
rdfs:comment "A host exposure to environment with infectious agent where the environment contains an infectious agent vector."@en ;
rdfs:subClassOf obo:IDO_0000597 .
obo:IDO_0000580 a rdfs:Class ;
rdfs:label "passive immunity to infectious agent"@en ;
rdfs:comment "An immunity to infectious agent that inheres in an organism in virtue of antibodies not produced by that organism."@en ;
rdfs:subClassOf obo:IDO_0000448 .
obo:IDO_0000213 a rdfs:Class ;
rdfs:label "_obsolete_resistance"@en ;
rdfs:subClassOf .
obo:IDO_0000209 a rdfs:Class ;
rdfs:label "_obsolete_dormancy"@en ;
rdfs:comment "'quality [state] of an organism that during its life cycle in which its growth. development, metabolism, etc is temporarily suspended nnnsuspended state, non-replicative state, resting state'-ID[O]:0000209: quality [state] of an organism that during its life cycle in which its growth. development, metabolism, etc is temporarily suspended nnnsuspended state, non-replicative state, resting state"@en ;
rdfs:subClassOf .
obo:BFO_0000031 a rdfs:Class ;
rdfs:label "generically dependent continuant"@en ;
rdfs:comment "A continuant that is dependent on one or other independent continuant bearers. For every instance of A requires some instance of (an independent continuant type) B but which instance of B serves can change from time to time."@en ;
rdfs:subClassOf obo:BFO_0000002 .
obo:IDO_0000450 a rdfs:Class ;
rdfs:label "pathogenic disposition"@en ;
rdfs:comment "A disposition to initiate processes that result in a disorder."@en ;
rdfs:subClassOf obo:BFO_0000016 .
obo:GO_0065007 a rdfs:Class ;
rdfs:label "biological regulation" ;
rdfs:comment "Any process that modulates a measurable attribute of any biological process, quality or function." ;
rdfs:subClassOf obo:BFO_0000015 .
obo:IDO_0000108 a rdfs:Class ;
rdfs:label "_obsolete_transport by blood"@en ;
rdfs:subClassOf .
obo:IDO_0000500 a rdfs:Class ;
rdfs:label "variolation"@en ;
rdfs:comment "An active immunization that begins with exposure to smallpox in the form of a scab from a pustule and results in immunity against smallpox."@en ;
rdfs:subClassOf obo:IDO_0000498 .
obo:IDO_0000595 a rdfs:Class ;
rdfs:label "potential host of infectious agent"@en ;
rdfs:comment "An organism that has the capability to bear a host of infectious agent role."@en ;
rdfs:subClassOf obo:OBI_0100026 .
a rdfs:Class ;
rdfs:comment "An unconstrained type or object" .
obo:IDO_0000437 a rdfs:Class ;
rdfs:label "adhesion disposition"@en ;
rdfs:comment "A disposition borne by a biological macromolecule that is the disposition to participate in adherence to a host."@en ;
rdfs:subClassOf obo:BFO_0000016 .
obo:IDO_0000076 a rdfs:Class ;
rdfs:label "_obsolete_specific adherence"@en ;
rdfs:subClassOf .
obo:IDO_0000205 a rdfs:Class ;
rdfs:label "_obsolete_colonization"@en ;
rdfs:comment "'the process by which a biotic entity establishes multiple copies of itself in a new environment (including an organismal environment).nnfix idn\"native\" environment term'-ID[O]:0000205: the process by which a biotic entity establishes multiple copies of itself in a new environment (including an organismal environment).nnfix idn\"native\" environment term"@en ;
rdfs:subClassOf .
obo:IDO_0001003 a rdfs:Class ;
rdfs:label "infection-based immunosuppression"@en ;
rdfs:comment "A pathologic immunosuppression process which arises as the result of an infection and is initiated or dysregulated by the infectious agent population." ;
rdfs:subClassOf obo:IDO_0000612 .
obo:IDO_0000224 a rdfs:Class ;
rdfs:label "_obsolete_intrinsic incubation period"@en ;
rdfs:subClassOf .
obo:TRANS_0000000 a rdfs:Class ;
rdfs:label "transmission process" ;
rdfs:comment "A process that is the means during which the pathogen is transmitted directly or indirectly from its natural reservoir, a susceptible host or source to a new host." ;
rdfs:subClassOf obo:BFO_0000015 .
obo:GO_0085030 a rdfs:Class ;
rdfs:label "mutualism" ;
rdfs:comment "An interaction between two organisms living together in more or less intimate association in a relationship in which both organisms benefit from each other." ;
rdfs:subClassOf obo:GO_0044403 .
obo:BFO_0000144 a rdfs:Class ;
rdfs:label "process profile"@en ;
rdfs:comment "b is a process_profile =Def. there is some process c such that b process_profile_of c (axiom label in BFO2 Reference: [093-002])"@en ;
rdfs:subClassOf obo:BFO_0000015 .
obo:IDO_0000638 a rdfs:Class ;
rdfs:label "nursing-home acquired infection"@en ;
rdfs:comment "An infection resulting from a transmission process that unfolds in a nursing home."@en ;
rdfs:subClassOf obo:IDO_0000586 .
obo:IDO_0000616 a rdfs:Class ;
rdfs:label "infectious agent colony"@en ;
rdfs:comment "A colony whose members are infectious agents."@en ;
rdfs:subClassOf obo:IDO_0000615 .
obo:IDO_0000037 a rdfs:Class ;
rdfs:label "_obsolete_commensal"@en ;
rdfs:subClassOf .
obo:IDO_0000519 a rdfs:Class ;
rdfs:label "incubation period"@en ;
rdfs:comment "A continuous temporal interval beginning with the extablishment of an infectious agent colony and ending with the onset of symptoms (or infectious disease course?)."@en ;
rdfs:subClassOf obo:BFO_0000038 .
obo:IDO_0000081 a rdfs:Class ;
rdfs:label "_obsolete_transcytosis"@en ;
rdfs:subClassOf .
obo:IDO_0000556 a rdfs:Class ;
rdfs:label "antiseptic"@en ;
rdfs:comment "A material entity bearing an antiseptic role."@en ;
rdfs:subClassOf obo:BFO_0000040 .
obo:IDO_0000485 a rdfs:Class ;
rdfs:label "infectious disease prevalence"@en ;
rdfs:comment "A quality that inheres in an organism population and is the number of realizations of an infectious disease in the population at a specified time."@en ;
rdfs:subClassOf obo:BFO_0000019 .
obo:IDO_0000048 a rdfs:Class ;
rdfs:label "_obsolete_symptom"@en ;
rdfs:comment "'look at mathias's ontology of cancer to get all the subterms...its under quality there'-ID[O]:0000048: look at mathias's ontology of cancer to get all the subterms...its under quality there"@en ;
rdfs:subClassOf .
obo:IDO_0000060 a rdfs:Class ;
rdfs:label "_obsolete_fomite"@en ;
rdfs:comment "'inanimate holder, is water a fomite or only a reservoir?'-ID[O]:0000060: inanimate holder, is water a fomite or only a reservoir?"@en ;
rdfs:subClassOf .
obo:BFO_0000147 a rdfs:Class ;
rdfs:label "zero-dimensional continuant fiat boundary"@en ;
rdfs:subClassOf obo:BFO_0000140 .
obo:IDO_0000599 a rdfs:Class ;
rdfs:label "host living in endemic area"@en ;
rdfs:comment "A host exposure to environment with infectious agent where the environment is an area in which an infectious agent is endemic"@en ;
rdfs:subClassOf obo:IDO_0000597 .
obo:IDO_0000656 a rdfs:Class ;
rdfs:label "horizontal pathogen transmission process" ;
rdfs:comment "A pathogen transmission process in which a pathogen is transmitted from one host to another of the same Species, and the two hosts are not in a parent-child relationship." ;
rdfs:subClassOf obo:TRANS_0000000 .
a rdfs:Class ;
rdfs:subClassOf obo:IAO_0000102 .
obo:IDO_0000522 a rdfs:Class ;
rdfs:label "symbiont"@en ;
rdfs:comment "An organism bearing a symbiont role."@en ;
rdfs:subClassOf obo:OBI_0100026 .
obo:IDO_0000104 a rdfs:Class ;
rdfs:label "_obsolete_infection"@en ;
rdfs:subClassOf .
obo:NCBITaxon_10239 a rdfs:Class ;
rdfs:label "Viruses" ;
rdfs:subClassOf obo:OBI_0100026 .
obo:IAO_0000027 a rdfs:Class ;
rdfs:label "data item"@en ;
rdfs:subClassOf obo:IAO_0000030 .
obo:BFO_0000024 a rdfs:Class ;
rdfs:label "fiat object"@en ;
rdfs:subClassOf obo:BFO_0000040 .
obo:IDO_0000650 a rdfs:Class ;
rdfs:label "colonization of human"@en ;
rdfs:comment "A colonization of host process in which the host is of Species Homo sapiens."@en ;
rdfs:subClassOf obo:IDO_0000604 .
obo:IDO_0000082 a rdfs:Class ;
rdfs:label "_obsolete_utilization of membranous cell gateway"@en ;
rdfs:subClassOf .
obo:IDO_0000494 a rdfs:Class ;
rdfs:label "infectious disease sporadicity"@en ;
rdfs:comment "A quality that inheres in an organism population by virtue of the fact that realizations of an infectious disease occur in the population with a fluctuating prevalence."@en ;
rdfs:subClassOf obo:BFO_0000019 .
obo:IDO_0000628 a rdfs:Class ;
rdfs:label "chronic infection"@en ;
rdfs:comment "An infection that persists for an extended period of time."@en ;
rdfs:subClassOf obo:IDO_0000586 .
obo:IDO_0000483 a rdfs:Class ;
rdfs:label "infectious disease incidence rate"@en ;
rdfs:comment "A quality that inheres in an organism population and is the infectious disease incidence proportion per unit time."@en ;
rdfs:subClassOf obo:BFO_0000019 .
obo:IDO_0000070 a rdfs:Class ;
rdfs:label "_obsolete_prion"@en ;
rdfs:subClassOf .
obo:IDO_0000623 a rdfs:Class ;
rdfs:label "communicability"@en ;
rdfs:comment "An infectious disposition to be transmitted directly from one organism to another of the same Species by horizontal transmission."@en ;
rdfs:subClassOf obo:IDO_0000452 .
obo:IDO_0000098 a rdfs:Class ;
rdfs:label "_obsolete_infectious disease"@en ;
rdfs:comment "'comment about the instances:nncollections of etiologically connected cases of infectious disease in a given population'-ID[O]:0000098: comment about the instances:nncollections of etiologically connected cases of infectious disease in a given population"@en ;
rdfs:subClassOf .
obo:NCBITaxon_2 a rdfs:Class ;
rdfs:label "Bacteria" ;
rdfs:subClassOf obo:OBI_0100026 .
obo:BFO_0000067 a rdf:Property ;
rdfs:label "contains process"@en ;
rdfs:comment "[copied from inverse property 'occurs in'] b occurs_in c =def b is a process and c is a material entity or immaterial entity& there exists a spatiotemporal region r and b occupies_spatiotemporal_region r.& forall(t) if b exists_at t then c exists_at t & there exist spatial regions s and s’ where & b spatially_projects_onto s at t& c is occupies_spatial_region s’ at t& s is a proper_continuant_part_of s’ at t"@en ;
rdfs:range .
obo:BFO_0000179 a rdf:Property ;
rdfs:label "BFO OWL specification label"@en ;
rdfs:comment "Relates an entity in the ontology to the name of the variable that is used to represent it in the code that generates the BFO OWL file from the lispy specification."@en ;
rdfs:range xsd:string .
obo:BFO_0000180 a rdf:Property ;
rdfs:label "BFO CLIF specification label"@en ;
rdfs:comment "Relates an entity in the ontology to the term that is used to represent it in the the CLIF specification of BFO2"@en ;
rdfs:range xsd:string .
obo:IAO_0000111 a rdf:Property ;
rdfs:label "editor preferred term"@en ;
rdfs:comment "The concise, meaningful, and human-friendly name for a class or property preferred by the ontology developers. (US-English)"@en ;
rdfs:range xsd:string .
obo:IAO_0000112 a rdf:Property ;
rdfs:label "example of usage"@en ;
rdfs:comment "A phrase describing how a term should be used and/or a citation to a work which uses it. May also include other kinds of examples that facilitate immediate understanding, such as widely know prototypes or instances of a class, or cases where a relation is said to hold."@en ;
rdfs:range xsd:string .
obo:IAO_0000113 a rdf:Property ;
rdfs:label "in branch"@en ;
rdfs:comment "An annotation property indicating which module the terms belong to. This is currently experimental and not implemented yet."@en ;
rdfs:range xsd:string .
obo:IAO_0000114 a rdf:Property ;
rdfs:label "has curation status"@en ;
rdfs:range xsd:string .
obo:IAO_0000115 a rdf:Property ;
rdfs:label "textual definition" ;
rdfs:comment "The official OBI definition, explaining the meaning of a class or property. Shall be Aristotelian, formalized and normalized. Can be augmented with colloquial definitions."@en ;
rdfs:range xsd:string .
obo:IAO_0000116 a rdf:Property ;
rdfs:label "editor note"@en ;
rdfs:comment "An administrative note intended for its editor. It may not be included in the publication version of the ontology, so it should contain nothing necessary for end users to understand the ontology."@en ;
rdfs:range xsd:string .
obo:IAO_0000117 a rdf:Property ;
rdfs:label "term editor"@en ;
rdfs:comment "Name of editor entering the term in the file. The term editor is a point of contact for information regarding the term. The term editor may be, but is not always, the author of the definition, which may have been worked upon by several people"@en ;
rdfs:range xsd:string .
obo:IAO_0000118 a rdf:Property ;
rdfs:label "alternative term"@en ;
rdfs:comment "An alternative name for a class or property which means the same thing as the preferred name (semantically equivalent)"@en ;
rdfs:range xsd:string .
obo:IAO_0000119 a rdf:Property ;
rdfs:label "definition source"@en ;
rdfs:comment "formal citation, e.g. identifier in external database to indicate / attribute source(s) for the definition. Free text indicate / attribute source(s) for the definition. EXAMPLE: Author Name, URI, MeSH Term C04, PUBMED ID, Wiki uri on 31.01.2007"@en ;
rdfs:range xsd:string .
obo:IAO_0000231 a rdf:Property ;
rdfs:label "has obsolescence reason"@en ;
rdfs:comment "Relates an annotation property to an obsolescence reason. The values of obsolescence reasons come from a list of predefined terms, instances of the class obsolescence reason specification."@en ;
rdfs:range xsd:string .
obo:IAO_0000232 a rdf:Property ;
rdfs:label "curator note"@en ;
rdfs:comment "An administrative note of use for a curator but of no use for a user"@en ;
rdfs:range xsd:string .
obo:IAO_0000233 a rdf:Property ;
rdfs:label "term tracker item"@en ;
rdfs:comment "An IRI or similar locator for a request or discussion of an ontology term." ;
rdfs:range xsd:string .
obo:IAO_0000234 a rdf:Property ;
rdfs:label "ontology term requester"@en ;
rdfs:comment "The name of the person, project, or organization that motivated inclusion of an ontology term by requesting its addition." ;
rdfs:range xsd:string .
obo:IAO_0000411 a rdf:Property ;
rdfs:label "is denotator type" ;
rdfs:comment "relates an class defined in an ontology, to the type of it's denotator" ;
rdfs:range xsd:string .
obo:IAO_0000412 a rdf:Property ;
rdfs:label "imported from"@en ;
rdfs:comment "For external terms/classes, the ontology from which the term was imported"@en ;
rdfs:range xsd:string .
obo:IAO_0000424 a rdf:Property ;
rdfs:label "expand expression to"@en ;
rdfs:comment "A macro expansion tag applied to an object property (or possibly a data property) which can be used by a macro-expansion engine to generate more complex expressions from simpler ones"@en ;
rdfs:range xsd:string .
obo:IAO_0000425 a rdf:Property ;
rdfs:label "expand assertion to"@en ;
rdfs:comment "A macro expansion tag applied to an annotation property which can be expanded into a more detailed axiom."@en ;
rdfs:range xsd:string .
obo:IAO_0000426 a rdf:Property ;
rdfs:label "first order logic expression"@en ;
rdfs:range xsd:string .
obo:IAO_0000427 a rdf:Property ;
rdfs:label "antisymmetric property"@en ;
rdfs:comment "use boolean value xsd:true to indicate that the property is an antisymmetric property"@en ;
rdfs:range xsd:string .
obo:IAO_0000589 a rdf:Property ;
rdfs:label "OBO foundry unique label"@en ;
rdfs:comment "An alternative name for a class or property which is unique across the OBO Foundry."@en ;
rdfs:range xsd:string .
obo:IAO_0000596 a rdf:Property ;
rdfs:label "has ID digit count"@en ;
rdfs:comment "Relates an ontology used to record id policy to the number of digits in the URI. The URI is: the 'has ID prefix\" annotation property value concatenated with an integer in the id range (left padded with \"0\"s to make this many digits)" ;
rdfs:range xsd:string .
obo:IAO_0000597 a rdf:Property ;
rdfs:label "has ID range allocated to"@en ;
rdfs:comment "Relates a datatype that encodes a range of integers to the name of the person or organization who can use those ids constructed in that range to define new terms" ;
rdfs:range xsd:string .
obo:IAO_0000598 a rdf:Property ;
rdfs:label "has ID policy for" ;
rdfs:comment "Relating an ontology used to record id policy to the ontology namespace whose policy it manages" ;
rdfs:range xsd:string .
obo:IAO_0000599 a rdf:Property ;
rdfs:label "has ID prefix"@en ;
rdfs:comment "Relates an ontology used to record id policy to a prefix concatenated with an integer in the id range (left padded with \"0\"s to make this many digits) to construct an ID for a term being created." ;
rdfs:range xsd:string .
obo:IAO_0000600 a rdf:Property ;
rdfs:label "elucidation"@en ;
rdfs:range xsd:string .
obo:IAO_0000601 a rdf:Property ;
rdfs:label "has associated axiom(nl)"@en ;
rdfs:range xsd:string .
obo:IAO_0000602 a rdf:Property ;
rdfs:label "has associated axiom(fol)"@en ;
rdfs:range xsd:string .
obo:IAO_0000603 a rdf:Property ;
rdfs:label "is allocated id range"@en ;
rdfs:comment "Relates an ontology IRI to an (inclusive) range of IRIs in an OBO name space. The range is give as, e.g. \"IAO_0020000-IAO_0020999\""@en ;
rdfs:range xsd:string .
obo:IAO_0010000 a rdf:Property ;
rdfs:label "has axiom label"@en ;
rdfs:range xsd:string .
obo:IAO_0100001 a rdf:Property ;
rdfs:label "term replaced by"@en ;
rdfs:comment "Use on obsolete terms, relating the term to another term that can be used as a substitute"@en ;
rdfs:range xsd:string .
obo:IDO_0000660 a rdf:Property ;
rdfs:label "results_in"@en ;
rdfs:range .
obo:RO_0000053 a rdf:Property ;
rdfs:label "bearer of"@en ;
rdfs:comment "a relation between an independent continuant (the bearer) and a specifically dependent continuant (the dependent), in which the dependent specifically depends on the bearer for its existence"@en ;
rdfs:range obo:BFO_0000020 .
obo:RO_0000080 a rdf:Property ;
rdfs:label "quality of"@en ;
rdfs:comment "a relation between a quality and an independent continuant (the bearer), in which the quality specifically depends on the bearer for its existence"@en ;
rdfs:range xsd:string ;
rdfs:subPropertyOf obo:RO_0000052 .
obo:RO_0000081 a rdf:Property ;
rdfs:label "role of"@en ;
rdfs:comment "a relation between a role and an independent continuant (the bearer), in which the role specifically depends on the bearer for its existence"@en ;
rdfs:range xsd:string ;
rdfs:subPropertyOf obo:RO_0000052 .
obo:RO_0000086 a rdf:Property ;
rdfs:label "has quality"@en ;
rdfs:comment "a relation between an independent continuant (the bearer) and a quality, in which the quality specifically depends on the bearer for its existence"@en ;
rdfs:range obo:BFO_0000019 ;
rdfs:subPropertyOf obo:RO_0000053 .
obo:RO_0000092 a rdf:Property ;
rdfs:label "disposition of"@en ;
rdfs:range xsd:string ;
rdfs:subPropertyOf obo:RO_0000052 .
obo:RO_0001000 a rdf:Property ;
rdfs:label "derives from"@en ;
rdfs:comment "a relation between two distinct material entities, the new entity and the old entity, in which the new entity begins to exist when the old entity ceases to exist, and the new entity inherits the significant portion of the matter of the old entity"@en ;
rdfs:range .
obo:RO_0001001 a rdf:Property ;
rdfs:label "derives into"@en ;
rdfs:comment "a relation between two distinct material entities, the old entity and the new entity, in which the new entity begins to exist when the old entity ceases to exist, and the new entity inherits the significant portion of the matter of the old entity"@en ;
rdfs:range .
obo:RO_0001015 a rdf:Property ;
rdfs:label "location of"@en ;
rdfs:comment "a relation between two independent continuants, the location and the target, in which the target is entirely within the location"@en ;
rdfs:range .
obo:RO_0001025 a rdf:Property ;
rdfs:label "located in"@en ;
rdfs:comment "a relation between two independent continuants, the target and the location, in which the target is entirely within the location"@en ;
rdfs:range .
obo:RO_0001900 a rdf:Property ;
rdfs:label "temporal interpretation"@en ;
rdfs:range xsd:string .
obo:RO_0002000 a rdf:Property ;
rdfs:label "2D boundary of"@en ;
rdfs:comment "a relation between a 2D immaterial entity (the boundary) and a material entity, in which the boundary delimits the material entity"@en ;
rdfs:range .
obo:RO_0002213 a rdf:Property ;
rdfs:label "positively regulates"@en ;
rdfs:comment "x positively regulates y if and only if the progression of x increases the frequency, rate or extent of y" ;
rdfs:range xsd:string ;
rdfs:subPropertyOf obo:RO_0002211 .
obo:RO_0002350 a rdf:Property ;
rdfs:label "member of"@en ;
rdfs:comment "is member of is a mereological relation between a item and a collection." ;
rdfs:range xsd:string ;
rdfs:subPropertyOf obo:BFO_0000050 .
obo:RO_0002351 a rdf:Property ;
rdfs:label "has member"@en ;
rdfs:comment "has member is a mereological relation between a collection and an item." ;
rdfs:range xsd:string ;
rdfs:subPropertyOf obo:BFO_0000051 .
obo:IAO_0000078 a rdfs:Class ;
rdfs:label "curation status specification"@en ;
rdfs:comment "The curation status of the term. The allowed values come from an enumerated list of predefined terms. See the specification of these instances for more detailed definitions of each enumerated value."@en ;
rdfs:subClassOf obo:IAO_0000102 .
obo:IAO_0000002 a obo:IAO_0000078 ;
rdfs:label "example to be eventually removed"@en .
obo:IAO_0000120 a obo:IAO_0000078 ;
rdfs:label "metadata complete"@en ;
rdfs:comment "Class has all its metadata, but is either not guaranteed to be in its final location in the asserted IS_A hierarchy or refers to another class that is not complete."@en .
obo:IAO_0000121 a obo:IAO_0000078 ;
rdfs:label "organizational term"@en ;
rdfs:comment "term created to ease viewing/sort terms for development purpose, and will not be included in a release"@en .
obo:IAO_0000122 a obo:IAO_0000078 ;
rdfs:label "ready for release"@en ;
rdfs:comment "Class has undergone final review, is ready for use, and will be included in the next release. Any class lacking \"ready_for_release\" should be considered likely to change place in hierarchy, have its definition refined, or be obsoleted in the next release. Those classes deemed \"ready_for_release\" will also derived from a chain of ancestor classes that are also \"ready_for_release.\""@en .
obo:IAO_0000123 a obo:IAO_0000078 ;
rdfs:label "metadata incomplete"@en ;
rdfs:comment "Class is being worked on; however, the metadata (including definition) are not complete or sufficiently clear to the branch editors."@en .
obo:IAO_0000124 a obo:IAO_0000078 ;
rdfs:label "uncurated"@en ;
rdfs:comment "Nothing done yet beyond assigning a unique class ID and proposing a preferred term."@en .
obo:IAO_0000125 a obo:IAO_0000078 ;
rdfs:label "pending final vetting"@en ;
rdfs:comment "All definitions, placement in the asserted IS_A hierarchy and required minimal metadata are complete. The class is awaiting a final review by someone other than the term editor."@en .
obo:IAO_0000423 a obo:IAO_0000078 ;
rdfs:label "to be replaced with external ontology term"@en ;
rdfs:comment "Terms with this status should eventually replaced with a term from another ontology."@en .
obo:IAO_0000428 a obo:IAO_0000078 ;
rdfs:label "requires discussion"@en ;
rdfs:comment "A term that is metadata complete, has been reviewed, and problems have been identified that require discussion before release. Such a term requires editor note(s) to identify the outstanding issues."@en .
obo:IAO_0000225 a rdfs:Class ;
rdfs:label "obsolescence reason specification"@en ;
rdfs:comment "The reason for which a term has been deprecated. The allowed values come from an enumerated list of predefined terms. See the specification of these instances for more detailed definitions of each enumerated value."@en ;
rdfs:subClassOf obo:IAO_0000102 .
obo:IAO_0000103 a obo:IAO_0000225 ;
rdfs:label "failed exploratory term"@en ;
rdfs:comment "The term was used in an attempt to structure part of the ontology but in retrospect failed to do a good job"@en .
obo:IAO_0000226 a obo:IAO_0000225 ;
rdfs:label "placeholder removed"@en .
obo:IAO_0000227 a obo:IAO_0000225 ;
rdfs:label "terms merged"@en .
obo:IAO_0000228 a obo:IAO_0000225 ;
rdfs:label "term imported"@en .
obo:IAO_0000229 a obo:IAO_0000225 ;
rdfs:label "term split"@en .
obo:IAO_0000409 a rdfs:Class ;
rdfs:label "denotator type" ;
rdfs:comment "A denotator type indicates how a term should be interpreted from an ontological perspective." ;
rdfs:subClassOf obo:IAO_0000102 .
obo:IAO_0000410 a obo:IAO_0000409 ;
rdfs:label "universal" .
obo:IAO_0000420 a obo:IAO_0000409 ;
rdfs:label "defined class" ;
rdfs:comment "A defined class is a class that is defined by a set of logically necessary and sufficient conditions but is not a universal" .
obo:IAO_0000421 a obo:IAO_0000409 ;
rdfs:label "named class expression" ;
rdfs:comment "A named class expression is a logical expression that is given a name. The name can be used in place of the expression." .
a rdfs:Class ;
rdfs:subClassOf obo:IAO_0000102 .
obo:IAO_0000224 a ;
rdfs:label "core"@en ;
rdfs:comment "Core is an instance of a grouping of terms from an ontology or ontologies. It is used by the ontology to identify main classes."@en .