@prefix rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#> .
@prefix owl: <http://www.w3.org/2002/07/owl#> .
@prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> .
@prefix xml: <http://www.w3.org/XML/1998/namespace> .
@prefix xsd: <http://www.w3.org/2001/XMLSchema#> .

<http://purl.obolibrary.org/obo/hom.owl> a owl:Ontology;
  <http://www.geneontology.org/formats/oboInOwl#NamespaceIdRule> "* HOM:$sequence(7,0,9999999)$";
  <http://www.geneontology.org/formats/oboInOwl#date> "02:12:2009 15:16";
  <http://www.geneontology.org/formats/oboInOwl#hasOBOFormatVersion> "1.2";
  <http://www.geneontology.org/formats/oboInOwl#default-namespace> "homology_and_related_concepts_in_biology";
  owl:versionIRI <http://purl.obolibrary.org/obo/hom/releases/2015-01-07/hom.owl> .

<http://purl.obolibrary.org/obo/IAO_0000115> a owl:AnnotationProperty;
  rdfs:label "definition" .

<http://www.geneontology.org/formats/oboInOwl#NamespaceIdRule> a owl:AnnotationProperty;
  rdfs:label "namespace-id-rule" .

<http://www.geneontology.org/formats/oboInOwl#auto-generated-by> a owl:AnnotationProperty .

<http://www.geneontology.org/formats/oboInOwl#created_by> a owl:AnnotationProperty .

<http://www.geneontology.org/formats/oboInOwl#creation_date> a owl:AnnotationProperty .

<http://www.geneontology.org/formats/oboInOwl#date> a owl:AnnotationProperty .

<http://www.geneontology.org/formats/oboInOwl#default-namespace> a owl:AnnotationProperty .

<http://www.geneontology.org/formats/oboInOwl#hasBroadSynonym> a owl:AnnotationProperty;
  rdfs:label "has_broad_synonym" .

<http://www.geneontology.org/formats/oboInOwl#hasDbXref> a owl:AnnotationProperty;
  rdfs:label "database_cross_reference" .

<http://www.geneontology.org/formats/oboInOwl#hasExactSynonym> a owl:AnnotationProperty;
  rdfs:label "has_exact_synonym" .

<http://www.geneontology.org/formats/oboInOwl#hasOBOFormatVersion> a owl:AnnotationProperty;
  rdfs:label "has_obo_format_version" .

<http://www.geneontology.org/formats/oboInOwl#hasOBONamespace> a owl:AnnotationProperty;
  rdfs:label "has_obo_namespace" .

<http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym> a owl:AnnotationProperty;
  rdfs:label "has_related_synonym" .

<http://www.geneontology.org/formats/oboInOwl#id> a owl:AnnotationProperty .

<http://www.geneontology.org/formats/oboInOwl#saved-by> a owl:AnnotationProperty .

rdfs:comment a owl:AnnotationProperty .

rdfs:label a owl:AnnotationProperty .

owl:deprecated a owl:AnnotationProperty .

<http://purl.obolibrary.org/obo/HOM_0000000> a owl:Class;
  rdfs:label "similarity";
  <http://www.geneontology.org/formats/oboInOwl#hasDbXref> "ECO:0000041", "SO:similar_to";
  <http://www.geneontology.org/formats/oboInOwl#id> "HOM:0000000";
  <http://purl.obolibrary.org/obo/IAO_0000115> "Relation between biological objects that resemble or are related to each other sufficiently to warrant a comparison.";
  <http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym> "correspondence",
    "resemblance";
  <http://www.geneontology.org/formats/oboInOwl#hasOBONamespace> "homology_and_related_concepts_in_biology";
  <http://www.geneontology.org/formats/oboInOwl#hasExactSynonym> "sameness" .

_:36ed7e a owl:Axiom;
  <http://www.geneontology.org/formats/oboInOwl#hasDbXref> "DOI:10.1007/BF02814479";
  owl:annotatedTarget "correspondence";
  owl:annotatedSource <http://purl.obolibrary.org/obo/HOM_0000000>;
  owl:annotatedProperty <http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym> .

_:36ed8e a owl:Axiom;
  <http://www.geneontology.org/formats/oboInOwl#hasDbXref> "BGEE:curator";
  owl:annotatedTarget "Relation between biological objects that resemble or are related to each other sufficiently to warrant a comparison.";
  owl:annotatedSource <http://purl.obolibrary.org/obo/HOM_0000000>;
  owl:annotatedProperty <http://purl.obolibrary.org/obo/IAO_0000115> .

_:36ed9e a owl:Axiom;
  rdfs:label "inferred from similarity";
  owl:annotatedTarget "ECO:0000041";
  owl:annotatedSource <http://purl.obolibrary.org/obo/HOM_0000000>;
  owl:annotatedProperty <http://www.geneontology.org/formats/oboInOwl#hasDbXref> .

<http://purl.obolibrary.org/obo/HOM_0000001> a owl:Class;
  rdfs:label "homology";
  rdfs:subClassOf <http://purl.obolibrary.org/obo/HOM_0000000>;
  owl:disjointWith <http://purl.obolibrary.org/obo/HOM_0000002>;
  <http://www.geneontology.org/formats/oboInOwl#id> "HOM:0000001";
  <http://purl.obolibrary.org/obo/IAO_0000115> "Similarity that results from common evolutionary origin.";
  rdfs:comment "This broad definition encompasses all the working definitions proposed so far in the literature.";
  <http://www.geneontology.org/formats/oboInOwl#hasOBONamespace> "homology_and_related_concepts_in_biology" .

_:36edae a owl:Axiom;
  <http://www.geneontology.org/formats/oboInOwl#hasDbXref> "DOI:10.1002/bies.950180611",
    "DOI:10.1002/jmor.1051730307", "DOI:10.1007/BF02814480";
  owl:annotatedTarget "Similarity that results from common evolutionary origin.";
  owl:annotatedSource <http://purl.obolibrary.org/obo/HOM_0000001>;
  owl:annotatedProperty <http://purl.obolibrary.org/obo/IAO_0000115> .

<http://purl.obolibrary.org/obo/HOM_0000002> a owl:Class;
  rdfs:label "homoplasy";
  rdfs:subClassOf <http://purl.obolibrary.org/obo/HOM_0000000>;
  <http://www.geneontology.org/formats/oboInOwl#id> "HOM:0000002";
  <http://purl.obolibrary.org/obo/IAO_0000115> "Similarity that results from independent evolution.";
  <http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym> "analogy";
  <http://www.geneontology.org/formats/oboInOwl#hasOBONamespace> "homology_and_related_concepts_in_biology" .

_:36edbe a owl:Axiom;
  <http://www.geneontology.org/formats/oboInOwl#hasDbXref> "DOI:10.1016/j.jhevol.2006.11.010";
  owl:annotatedTarget "Similarity that results from independent evolution.";
  owl:annotatedSource <http://purl.obolibrary.org/obo/HOM_0000002>;
  owl:annotatedProperty <http://purl.obolibrary.org/obo/IAO_0000115> .

<http://purl.obolibrary.org/obo/HOM_0000003> a owl:Class;
  rdfs:label "homocracy";
  rdfs:subClassOf <http://purl.obolibrary.org/obo/HOM_0000000>;
  <http://www.geneontology.org/formats/oboInOwl#hasDbXref> "ECO:0000075";
  <http://www.geneontology.org/formats/oboInOwl#id> "HOM:0000003";
  rdfs:comment "Homology and homocracy are not mutually exclusive. The homology relationships of patterning genes may be unresolved and thus may include orthologues and paralogues.";
  <http://purl.obolibrary.org/obo/IAO_0000115> "Similarity that is characterized by the organization of anatomical structures through the expression of homologous or identical patterning genes.";
  <http://www.geneontology.org/formats/oboInOwl#hasOBONamespace> "homology_and_related_concepts_in_biology" .

_:36edce a owl:Axiom;
  rdfs:label "inferred from gene expression similarity";
  owl:annotatedTarget "ECO:0000075";
  owl:annotatedSource <http://purl.obolibrary.org/obo/HOM_0000003>;
  owl:annotatedProperty <http://www.geneontology.org/formats/oboInOwl#hasDbXref> .

_:36edde a owl:Axiom;
  <http://www.geneontology.org/formats/oboInOwl#hasDbXref> "DOI:10.1007/BF02814484",
    "DOI:10.1007/s00427-003-0301-4", "DOI:10.1186/1742-9994-2-15";
  owl:annotatedTarget "Similarity that is characterized by the organization of anatomical structures through the expression of homologous or identical patterning genes.";
  owl:annotatedSource <http://purl.obolibrary.org/obo/HOM_0000003>;
  owl:annotatedProperty <http://purl.obolibrary.org/obo/IAO_0000115> .

<http://purl.obolibrary.org/obo/HOM_0000004> a owl:Class;
  rdfs:label "convergence";
  rdfs:subClassOf <http://purl.obolibrary.org/obo/HOM_0000002>;
  rdfs:comment "Convergence usually implies a notion of adaptation.";
  <http://www.geneontology.org/formats/oboInOwl#id> "HOM:0000004";
  <http://purl.obolibrary.org/obo/IAO_0000115> "Homoplasy that involves different underlying mechanisms or structures.";
  <http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym> "analogy";
  <http://www.geneontology.org/formats/oboInOwl#hasOBONamespace> "homology_and_related_concepts_in_biology" .

_:36edee a owl:Axiom;
  <http://www.geneontology.org/formats/oboInOwl#hasDbXref> "DOI:10.1016/j.jhevol.2006.11.010";
  owl:annotatedTarget "Homoplasy that involves different underlying mechanisms or structures.";
  owl:annotatedSource <http://purl.obolibrary.org/obo/HOM_0000004>;
  owl:annotatedProperty <http://purl.obolibrary.org/obo/IAO_0000115> .

<http://purl.obolibrary.org/obo/HOM_0000005> a owl:Class;
  rdfs:label "parallelism";
  rdfs:subClassOf <http://purl.obolibrary.org/obo/HOM_0000002>;
  rdfs:comment "Can be applied for features present in closely related organisms but not present continuously in all the members of the lineage.";
  <http://www.geneontology.org/formats/oboInOwl#id> "HOM:0000005";
  <http://purl.obolibrary.org/obo/IAO_0000115> "Homoplasy that involves homologous underlying mechanisms or structures.";
  <http://www.geneontology.org/formats/oboInOwl#hasOBONamespace> "homology_and_related_concepts_in_biology";
  <http://www.geneontology.org/formats/oboInOwl#hasExactSynonym> "parallel evolution" .

_:36edfe a owl:Axiom;
  <http://www.geneontology.org/formats/oboInOwl#hasDbXref> "DOI:10.1016/j.jhevol.2006.11.010";
  owl:annotatedTarget "Homoplasy that involves homologous underlying mechanisms or structures.";
  owl:annotatedSource <http://purl.obolibrary.org/obo/HOM_0000005>;
  owl:annotatedProperty <http://purl.obolibrary.org/obo/IAO_0000115> .

<http://purl.obolibrary.org/obo/HOM_0000006> a owl:Class;
  rdfs:label "structural homology";
  rdfs:subClassOf <http://purl.obolibrary.org/obo/HOM_0000001>;
  <http://www.geneontology.org/formats/oboInOwl#hasDbXref> "ECO:0000071", "MI:2163";
  <http://www.geneontology.org/formats/oboInOwl#id> "HOM:0000006";
  <http://purl.obolibrary.org/obo/IAO_0000115> "Homology that is defined by similarity with regard to selected structural parameters.";
  <http://www.geneontology.org/formats/oboInOwl#hasOBONamespace> "homology_and_related_concepts_in_biology";
  <http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym> "idealistic homology" .

_:36ee0e a owl:Axiom;
  <http://www.geneontology.org/formats/oboInOwl#hasDbXref> "DOI:10.1016/j.jhevol.2006.11.014",
    "DOI:10.1146/annurev.es.20.110189.000411", "ISBN:0123195837";
  owl:annotatedTarget "Homology that is defined by similarity with regard to selected structural parameters.";
  owl:annotatedSource <http://purl.obolibrary.org/obo/HOM_0000006>;
  owl:annotatedProperty <http://purl.obolibrary.org/obo/IAO_0000115> .

_:36ee1e a owl:Axiom;
  rdfs:label "inferred from morphological similarity";
  owl:annotatedTarget "ECO:0000071";
  owl:annotatedSource <http://purl.obolibrary.org/obo/HOM_0000006>;
  owl:annotatedProperty <http://www.geneontology.org/formats/oboInOwl#hasDbXref> .

_:36ee2e a owl:Axiom;
  rdfs:label "by homology";
  owl:annotatedTarget "MI:2163";
  owl:annotatedSource <http://purl.obolibrary.org/obo/HOM_0000006>;
  owl:annotatedProperty <http://www.geneontology.org/formats/oboInOwl#hasDbXref> .

<http://purl.obolibrary.org/obo/HOM_0000007> a owl:Class;
  rdfs:label "historical homology";
  rdfs:subClassOf <http://purl.obolibrary.org/obo/HOM_0000001>;
  <http://www.geneontology.org/formats/oboInOwl#hasDbXref> "ECO:0000080", "RO_proposed_relation:homologous_to",
    "SO:0000330", "SO:0000853", "SO:0000857", "SO:homologous_to", "TAO:homologous_to";
  <http://www.geneontology.org/formats/oboInOwl#id> "HOM:0000007";
  <http://purl.obolibrary.org/obo/IAO_0000115> "Homology that is defined by common descent.";
  <http://www.geneontology.org/formats/oboInOwl#hasExactSynonym> "cladistic homology",
    "phylogenetic homology", "taxic homology";
  <http://www.geneontology.org/formats/oboInOwl#hasBroadSynonym> "homology";
  <http://www.geneontology.org/formats/oboInOwl#hasOBONamespace> "homology_and_related_concepts_in_biology";
  <http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym> "true homology" .

_:36ee3e a owl:Axiom;
  rdfs:label "homologous";
  owl:annotatedTarget "SO:0000857";
  owl:annotatedSource <http://purl.obolibrary.org/obo/HOM_0000007>;
  owl:annotatedProperty <http://www.geneontology.org/formats/oboInOwl#hasDbXref> .

_:36ee4e a owl:Axiom;
  rdfs:label "conserved_region";
  owl:annotatedTarget "SO:0000330";
  owl:annotatedSource <http://purl.obolibrary.org/obo/HOM_0000007>;
  owl:annotatedProperty <http://www.geneontology.org/formats/oboInOwl#hasDbXref> .

_:36ee5e a owl:Axiom;
  rdfs:label "inferred from phylogeny";
  owl:annotatedTarget "ECO:0000080";
  owl:annotatedSource <http://purl.obolibrary.org/obo/HOM_0000007>;
  owl:annotatedProperty <http://www.geneontology.org/formats/oboInOwl#hasDbXref> .

_:36ee6e a owl:Axiom;
  rdfs:label "homologous_region";
  owl:annotatedTarget "SO:0000853";
  owl:annotatedSource <http://purl.obolibrary.org/obo/HOM_0000007>;
  owl:annotatedProperty <http://www.geneontology.org/formats/oboInOwl#hasDbXref> .

_:36ee7e a owl:Axiom;
  <http://www.geneontology.org/formats/oboInOwl#hasDbXref> "DOI:10.1016/S0169-5347(97)01125-7",
    "ISBN:0123195837";
  owl:annotatedTarget "Homology that is defined by common descent.";
  owl:annotatedSource <http://purl.obolibrary.org/obo/HOM_0000007>;
  owl:annotatedProperty <http://purl.obolibrary.org/obo/IAO_0000115> .

<http://purl.obolibrary.org/obo/HOM_0000008> a owl:Class;
  rdfs:label "biological homology";
  rdfs:subClassOf <http://purl.obolibrary.org/obo/HOM_0000001>;
  rdfs:comment "Applicable only to morphology. A certain degree of ambiguity is accepted between biological homology and parallelism.";
  <http://www.geneontology.org/formats/oboInOwl#hasDbXref> "ECO:0000067";
  <http://www.geneontology.org/formats/oboInOwl#id> "HOM:0000008";
  <http://purl.obolibrary.org/obo/IAO_0000115> "Homology that is defined by sharing of a set of developmental constraints, caused by locally acting self-regulatory mechanisms of differentiation, between individualized parts of the phenotype.";
  <http://www.geneontology.org/formats/oboInOwl#hasOBONamespace> "homology_and_related_concepts_in_biology";
  <http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym> "transformational homology" .

_:36ee8e a owl:Axiom;
  rdfs:label "inferred from developmental similarity";
  owl:annotatedTarget "ECO:0000067";
  owl:annotatedSource <http://purl.obolibrary.org/obo/HOM_0000008>;
  owl:annotatedProperty <http://www.geneontology.org/formats/oboInOwl#hasDbXref> .

_:36ee9e a owl:Axiom;
  <http://www.geneontology.org/formats/oboInOwl#hasDbXref> "DOI:10.1016/S0169-5347(97)01125-7",
    "DOI:10.1146/annurev.es.20.110189.000411";
  owl:annotatedTarget "Homology that is defined by sharing of a set of developmental constraints, caused by locally acting self-regulatory mechanisms of differentiation, between individualized parts of the phenotype.";
  owl:annotatedSource <http://purl.obolibrary.org/obo/HOM_0000008>;
  owl:annotatedProperty <http://purl.obolibrary.org/obo/IAO_0000115> .

<http://purl.obolibrary.org/obo/HOM_0000009> a owl:Class;
  rdfs:label "reversal";
  rdfs:subClassOf <http://purl.obolibrary.org/obo/HOM_0000002>;
  <http://www.geneontology.org/formats/oboInOwl#id> "HOM:0000009";
  <http://purl.obolibrary.org/obo/IAO_0000115> "Homoplasy that involves phenotypes similar to those seen in ancestors within the lineage.";
  <http://www.geneontology.org/formats/oboInOwl#hasExactSynonym> "atavism", "rudiment";
  <http://www.geneontology.org/formats/oboInOwl#hasOBONamespace> "homology_and_related_concepts_in_biology";
  <http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym> "reversion" .

_:36eeae a owl:Axiom;
  <http://www.geneontology.org/formats/oboInOwl#hasDbXref> "DOI:10.1016/j.jhevol.2006.11.010";
  owl:annotatedTarget "Homoplasy that involves phenotypes similar to those seen in ancestors within the lineage.";
  owl:annotatedSource <http://purl.obolibrary.org/obo/HOM_0000009>;
  owl:annotatedProperty <http://purl.obolibrary.org/obo/IAO_0000115> .

<http://purl.obolibrary.org/obo/HOM_0000010> a owl:Class;
  rdfs:label "syntenic homology";
  rdfs:subClassOf <http://purl.obolibrary.org/obo/HOM_0000006>;
  <http://www.geneontology.org/formats/oboInOwl#id> "HOM:0000010";
  <http://www.geneontology.org/formats/oboInOwl#hasDbXref> "MeSH:Synteny", "SO:0000860",
    "SO:0005858";
  <http://purl.obolibrary.org/obo/IAO_0000115> "Structural homology that is detected by similarity in content and organization between chromosomes.";
  <http://www.geneontology.org/formats/oboInOwl#hasOBONamespace> "homology_and_related_concepts_in_biology";
  <http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym> "synteny" .

_:36eebe a owl:Axiom;
  rdfs:label "syntenic_region";
  owl:annotatedTarget "SO:0005858";
  owl:annotatedSource <http://purl.obolibrary.org/obo/HOM_0000010>;
  owl:annotatedProperty <http://www.geneontology.org/formats/oboInOwl#hasDbXref> .

_:36eece a owl:Axiom;
  rdfs:label "syntenic";
  owl:annotatedTarget "SO:0000860";
  owl:annotatedSource <http://purl.obolibrary.org/obo/HOM_0000010>;
  owl:annotatedProperty <http://www.geneontology.org/formats/oboInOwl#hasDbXref> .

_:36eede a owl:Axiom;
  <http://www.geneontology.org/formats/oboInOwl#hasDbXref> "MeSH:Synteny";
  owl:annotatedTarget "Structural homology that is detected by similarity in content and organization between chromosomes.";
  owl:annotatedSource <http://purl.obolibrary.org/obo/HOM_0000010>;
  owl:annotatedProperty <http://purl.obolibrary.org/obo/IAO_0000115> .

<http://purl.obolibrary.org/obo/HOM_0000011> a owl:Class;
  rdfs:label "paralogy";
  rdfs:subClassOf <http://purl.obolibrary.org/obo/HOM_0000007>;
  owl:disjointWith <http://purl.obolibrary.org/obo/HOM_0000017>;
  <http://www.geneontology.org/formats/oboInOwl#id> "HOM:0000011";
  <http://purl.obolibrary.org/obo/IAO_0000115> "Historical homology that involves genes that diverged after a duplication event.";
  <http://www.geneontology.org/formats/oboInOwl#hasDbXref> "SO:0000854", "SO:0000859",
    "SO:paralogous_to";
  <http://www.geneontology.org/formats/oboInOwl#hasOBONamespace> "homology_and_related_concepts_in_biology" .

_:36eeee a owl:Axiom;
  rdfs:label "paralogous_region";
  owl:annotatedTarget "SO:0000854";
  owl:annotatedSource <http://purl.obolibrary.org/obo/HOM_0000011>;
  owl:annotatedProperty <http://www.geneontology.org/formats/oboInOwl#hasDbXref> .

_:36eefe a owl:Axiom;
  <http://www.geneontology.org/formats/oboInOwl#hasDbXref> "DOI:10.1016/S0168-9525(00)02005-9",
    "DOI:10.1146/annurev.genet.39.073003.114725", "PMID:5449325";
  owl:annotatedTarget "Historical homology that involves genes that diverged after a duplication event.";
  owl:annotatedSource <http://purl.obolibrary.org/obo/HOM_0000011>;
  owl:annotatedProperty <http://purl.obolibrary.org/obo/IAO_0000115> .

_:36ef0e a owl:Axiom;
  rdfs:label "paralogous";
  owl:annotatedTarget "SO:0000859";
  owl:annotatedSource <http://purl.obolibrary.org/obo/HOM_0000011>;
  owl:annotatedProperty <http://www.geneontology.org/formats/oboInOwl#hasDbXref> .

<http://purl.obolibrary.org/obo/HOM_0000012> a owl:Class;
  rdfs:label "syntenic paralogy";
  rdfs:subClassOf <http://purl.obolibrary.org/obo/HOM_0000010>, <http://purl.obolibrary.org/obo/HOM_0000011>;
  <http://www.geneontology.org/formats/oboInOwl#id> "HOM:0000012";
  <http://purl.obolibrary.org/obo/IAO_0000115> "Paralogy that involves sets of syntenic blocks.";
  <http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym> "duplicon", "paralogon";
  <http://www.geneontology.org/formats/oboInOwl#hasOBONamespace> "homology_and_related_concepts_in_biology" .

_:36ef1e a owl:Axiom;
  <http://www.geneontology.org/formats/oboInOwl#hasDbXref> "DOI:10.1002/1097-010X(20001215)288:4<345::AID-JEZ7>3.0.CO;2-Y",
    "DOI:10.1186/1471-213X-7-100";
  owl:annotatedTarget "Paralogy that involves sets of syntenic blocks.";
  owl:annotatedSource <http://purl.obolibrary.org/obo/HOM_0000012>;
  owl:annotatedProperty <http://purl.obolibrary.org/obo/IAO_0000115> .

<http://purl.obolibrary.org/obo/HOM_0000013> a owl:Class;
  rdfs:label "syntenic orthology";
  rdfs:subClassOf <http://purl.obolibrary.org/obo/HOM_0000010>;
  <http://www.geneontology.org/formats/oboInOwl#id> "HOM:0000013";
  <http://purl.obolibrary.org/obo/IAO_0000115> "Syntenic homology that involves chromosomes of different species.";
  <http://www.geneontology.org/formats/oboInOwl#hasOBONamespace> "homology_and_related_concepts_in_biology" .

_:36ef2e a owl:Axiom;
  <http://www.geneontology.org/formats/oboInOwl#hasDbXref> "DOI:10.1101/gr.6380007";
  owl:annotatedTarget "Syntenic homology that involves chromosomes of different species.";
  owl:annotatedSource <http://purl.obolibrary.org/obo/HOM_0000013>;
  owl:annotatedProperty <http://purl.obolibrary.org/obo/IAO_0000115> .

<http://purl.obolibrary.org/obo/HOM_0000014> a owl:Class;
  rdfs:label "partial homology";
  rdfs:subClassOf <http://purl.obolibrary.org/obo/HOM_0000006>;
  <http://www.geneontology.org/formats/oboInOwl#id> "HOM:0000014";
  <http://purl.obolibrary.org/obo/IAO_0000115> "Structural homology that involves complex structures from which only a fraction of the elements that can be isolated are separately homologous.";
  <http://www.geneontology.org/formats/oboInOwl#hasExactSynonym> "fractional homology",
    "segmental homology";
  <http://www.geneontology.org/formats/oboInOwl#hasOBONamespace> "homology_and_related_concepts_in_biology";
  <http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym> "mixed homology",
    "modular homology", "partial correspondence", "percent homology" .

_:36ef3e a owl:Axiom;
  <http://www.geneontology.org/formats/oboInOwl#hasDbXref> "ISBN:0123195837", "ISBN:978-0471984931";
  owl:annotatedTarget "Structural homology that involves complex structures from which only a fraction of the elements that can be isolated are separately homologous.";
  owl:annotatedSource <http://purl.obolibrary.org/obo/HOM_0000014>;
  owl:annotatedProperty <http://purl.obolibrary.org/obo/IAO_0000115> .

<http://purl.obolibrary.org/obo/HOM_0000015> a owl:Class;
  rdfs:label "protein structural homology";
  rdfs:subClassOf <http://purl.obolibrary.org/obo/HOM_0000006>;
  <http://www.geneontology.org/formats/oboInOwl#id> "HOM:0000015";
  <http://www.geneontology.org/formats/oboInOwl#hasDbXref> "MeSH:Structural Homology, Protein";
  <http://purl.obolibrary.org/obo/IAO_0000115> "Structural homology that is detected at the level of the 3D protein structure, but maybe not at the level of the amino acid sequence.";
  <http://www.geneontology.org/formats/oboInOwl#hasOBONamespace> "homology_and_related_concepts_in_biology" .

_:36ef4e a owl:Axiom;
  <http://www.geneontology.org/formats/oboInOwl#hasDbXref> "DOI:10.1016/0022-2836(76)90195-9";
  owl:annotatedTarget "Structural homology that is detected at the level of the 3D protein structure, but maybe not at the level of the amino acid sequence.";
  owl:annotatedSource <http://purl.obolibrary.org/obo/HOM_0000015>;
  owl:annotatedProperty <http://purl.obolibrary.org/obo/IAO_0000115> .

<http://purl.obolibrary.org/obo/HOM_0000016> a owl:Class;
  rdfs:label "non functional homology";
  rdfs:subClassOf <http://purl.obolibrary.org/obo/HOM_0000006>;
  owl:disjointWith <http://purl.obolibrary.org/obo/HOM_0000062>;
  <http://www.geneontology.org/formats/oboInOwl#id> "HOM:0000016";
  <http://www.geneontology.org/formats/oboInOwl#hasDbXref> "SO:non_functional_homolog_of";
  <http://purl.obolibrary.org/obo/IAO_0000115> "Structural homology that involves a pseudogenic feature and its functional ancestor.";
  <http://www.geneontology.org/formats/oboInOwl#hasOBONamespace> "homology_and_related_concepts_in_biology";
  <http://www.geneontology.org/formats/oboInOwl#hasBroadSynonym> "pseudogene" .

_:36ef5e a owl:Axiom;
  <http://www.geneontology.org/formats/oboInOwl#hasDbXref> "SO:non_functional_homolog_of";
  owl:annotatedTarget "Structural homology that involves a pseudogenic feature and its functional ancestor.";
  owl:annotatedSource <http://purl.obolibrary.org/obo/HOM_0000016>;
  owl:annotatedProperty <http://purl.obolibrary.org/obo/IAO_0000115> .

<http://purl.obolibrary.org/obo/HOM_0000017> a owl:Class;
  rdfs:label "orthology";
  rdfs:subClassOf <http://purl.obolibrary.org/obo/HOM_0000007>;
  <http://www.geneontology.org/formats/oboInOwl#hasDbXref> "ECO:00000060", "SO:0000855",
    "SO:0000858", "SO:orthologous_to";
  <http://www.geneontology.org/formats/oboInOwl#id> "HOM:0000017";
  <http://purl.obolibrary.org/obo/IAO_0000115> "Historical homology that involves genes that diverged after a speciation event.";
  rdfs:comment "The term is sometimes also used for anatomical structures.";
  <http://www.geneontology.org/formats/oboInOwl#hasOBONamespace> "homology_and_related_concepts_in_biology" .

_:36ef6e a owl:Axiom;
  <http://www.geneontology.org/formats/oboInOwl#hasDbXref> "DOI:10.1007/BF02814484",
    "DOI:10.1016/S0168-9525(00)02005-9", "DOI:10.1146/annurev.genet.39.073003.114725",
    "PMID:5449325";
  owl:annotatedTarget "Historical homology that involves genes that diverged after a speciation event.";
  owl:annotatedSource <http://purl.obolibrary.org/obo/HOM_0000017>;
  owl:annotatedProperty <http://purl.obolibrary.org/obo/IAO_0000115> .

_:36ef7e a owl:Axiom;
  rdfs:label "inferred from sequence orthology";
  owl:annotatedTarget "ECO:00000060";
  owl:annotatedSource <http://purl.obolibrary.org/obo/HOM_0000017>;
  owl:annotatedProperty <http://www.geneontology.org/formats/oboInOwl#hasDbXref> .

_:36ef8e a owl:Axiom;
  rdfs:label "orthologous";
  owl:annotatedTarget "SO:0000858";
  owl:annotatedSource <http://purl.obolibrary.org/obo/HOM_0000017>;
  owl:annotatedProperty <http://www.geneontology.org/formats/oboInOwl#hasDbXref> .

_:36ef9e a owl:Axiom;
  rdfs:label "orthologous_region";
  owl:annotatedTarget "SO:0000855";
  owl:annotatedSource <http://purl.obolibrary.org/obo/HOM_0000017>;
  owl:annotatedProperty <http://www.geneontology.org/formats/oboInOwl#hasDbXref> .

<http://purl.obolibrary.org/obo/HOM_0000018> a owl:Class;
  rdfs:label "xenology";
  rdfs:subClassOf <http://purl.obolibrary.org/obo/HOM_0000007>;
  <http://www.geneontology.org/formats/oboInOwl#id> "HOM:0000018";
  <http://purl.obolibrary.org/obo/IAO_0000115> "Historical homology that is characterized by an interspecies (horizontal) transfer since the common ancestor.";
  rdfs:comment "The term is sometimes also used for anatomical structures (e.g. in case of a symbiosis).";
  <http://www.geneontology.org/formats/oboInOwl#hasOBONamespace> "homology_and_related_concepts_in_biology" .

_:36efae a owl:Axiom;
  <http://www.geneontology.org/formats/oboInOwl#hasDbXref> "DOI:10.1016/S0168-9525(00)02005-9",
    "DOI:10.1146/annurev.genet.39.073003.114725";
  owl:annotatedTarget "Historical homology that is characterized by an interspecies (horizontal) transfer since the common ancestor.";
  owl:annotatedSource <http://purl.obolibrary.org/obo/HOM_0000018>;
  owl:annotatedProperty <http://purl.obolibrary.org/obo/IAO_0000115> .

<http://purl.obolibrary.org/obo/HOM_0000019> a owl:Class;
  rdfs:label "1 to 1 homology";
  rdfs:subClassOf <http://purl.obolibrary.org/obo/HOM_0000007>;
  <http://www.geneontology.org/formats/oboInOwl#hasExactSynonym> "1:1 homology", "one-to-one homology";
  <http://www.geneontology.org/formats/oboInOwl#id> "HOM:0000019";
  <http://purl.obolibrary.org/obo/IAO_0000115> "Historical homology that involves two members sharing no other homologs in the lineages considered.";
  <http://www.geneontology.org/formats/oboInOwl#hasOBONamespace> "homology_and_related_concepts_in_biology" .

_:36efbe a owl:Axiom;
  <http://www.geneontology.org/formats/oboInOwl#hasDbXref> "BGEE:curator";
  owl:annotatedTarget "Historical homology that involves two members sharing no other homologs in the lineages considered.";
  owl:annotatedSource <http://purl.obolibrary.org/obo/HOM_0000019>;
  owl:annotatedProperty <http://purl.obolibrary.org/obo/IAO_0000115> .

<http://purl.obolibrary.org/obo/HOM_0000020> a owl:Class;
  rdfs:label "1 to 1 orthology";
  rdfs:subClassOf <http://purl.obolibrary.org/obo/HOM_0000017>, <http://purl.obolibrary.org/obo/HOM_0000019>;
  <http://www.geneontology.org/formats/oboInOwl#hasExactSynonym> "1:1 orthology", "one-to-one orthology";
  <http://www.geneontology.org/formats/oboInOwl#id> "HOM:0000020";
  <http://purl.obolibrary.org/obo/IAO_0000115> "Orthology that involves two genes that did not experience any duplication after the speciation event that created them.";
  <http://www.geneontology.org/formats/oboInOwl#hasOBONamespace> "homology_and_related_concepts_in_biology" .

_:36efce a owl:Axiom;
  <http://www.geneontology.org/formats/oboInOwl#hasDbXref> "DOI:10.1007/BF02814484",
    "http://www.ensembl.org/info/docs/compara/homology_method.html";
  owl:annotatedTarget "Orthology that involves two genes that did not experience any duplication after the speciation event that created them.";
  owl:annotatedSource <http://purl.obolibrary.org/obo/HOM_0000020>;
  owl:annotatedProperty <http://purl.obolibrary.org/obo/IAO_0000115> .

<http://purl.obolibrary.org/obo/HOM_0000021> a owl:Class;
  rdfs:label "allogeny";
  <http://www.geneontology.org/formats/oboInOwl#id> "HOM:0000021";
  <http://purl.obolibrary.org/obo/IAO_0000115> "Relationship between recognizably corresponding characters that occurs in two or more taxa and have different generative bases.";
  <http://www.geneontology.org/formats/oboInOwl#hasExactSynonym> "generative homoplasy";
  <http://www.geneontology.org/formats/oboInOwl#hasOBONamespace> "homology_and_related_concepts_in_biology";
  owl:deprecated true .

_:36efde a owl:Axiom;
  <http://www.geneontology.org/formats/oboInOwl#hasDbXref> "DOI:10.1002/1521-1878(200009)22:9<846::AID-BIES10>3.0.CO;2-R";
  owl:annotatedTarget "Relationship between recognizably corresponding characters that occurs in two or more taxa and have different generative bases.";
  owl:annotatedSource <http://purl.obolibrary.org/obo/HOM_0000021>;
  owl:annotatedProperty <http://purl.obolibrary.org/obo/IAO_0000115> .

<http://purl.obolibrary.org/obo/HOM_0000022> a owl:Class;
  rdfs:label "ohnology";
  rdfs:subClassOf <http://purl.obolibrary.org/obo/HOM_0000011>;
  <http://www.geneontology.org/formats/oboInOwl#id> "HOM:0000022";
  <http://purl.obolibrary.org/obo/IAO_0000115> "Paralogy that results from a whole genome duplication event.";
  <http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym> "homoeology";
  <http://www.geneontology.org/formats/oboInOwl#hasOBONamespace> "homology_and_related_concepts_in_biology" .

_:36efee a owl:Axiom;
  <http://www.geneontology.org/formats/oboInOwl#hasDbXref> "DOI:10.1038/75560";
  owl:annotatedTarget "Paralogy that results from a whole genome duplication event.";
  owl:annotatedSource <http://purl.obolibrary.org/obo/HOM_0000022>;
  owl:annotatedProperty <http://purl.obolibrary.org/obo/IAO_0000115> .

<http://purl.obolibrary.org/obo/HOM_0000023> a owl:Class;
  rdfs:label "in-paralogy";
  rdfs:subClassOf <http://purl.obolibrary.org/obo/HOM_0000011>;
  owl:disjointWith <http://purl.obolibrary.org/obo/HOM_0000024>;
  <http://www.geneontology.org/formats/oboInOwl#id> "HOM:0000023";
  <http://purl.obolibrary.org/obo/IAO_0000115> "Paralogy that results from a lineage-specific duplication subsequent to a given speciation event.";
  <http://www.geneontology.org/formats/oboInOwl#hasOBONamespace> "homology_and_related_concepts_in_biology";
  <http://www.geneontology.org/formats/oboInOwl#hasExactSynonym> "inparalogy", "symparalogy" .

_:36effe a owl:Axiom;
  <http://www.geneontology.org/formats/oboInOwl#hasDbXref> "DOI:10.1146/annurev.genet.39.073003.114725";
  owl:annotatedTarget "Paralogy that results from a lineage-specific duplication subsequent to a given speciation event.";
  owl:annotatedSource <http://purl.obolibrary.org/obo/HOM_0000023>;
  owl:annotatedProperty <http://purl.obolibrary.org/obo/IAO_0000115> .

<http://purl.obolibrary.org/obo/HOM_0000024> a owl:Class;
  rdfs:label "out-paralogy";
  rdfs:subClassOf <http://purl.obolibrary.org/obo/HOM_0000011>;
  <http://www.geneontology.org/formats/oboInOwl#id> "HOM:0000024";
  <http://purl.obolibrary.org/obo/IAO_0000115> "Paralogy that results from a duplication preceding a given speciation event.";
  <http://www.geneontology.org/formats/oboInOwl#hasExactSynonym> "alloparalogy", "outparalogy";
  <http://www.geneontology.org/formats/oboInOwl#hasOBONamespace> "homology_and_related_concepts_in_biology" .

_:36f00e a owl:Axiom;
  <http://www.geneontology.org/formats/oboInOwl#hasDbXref> "DOI:10.1146/annurev.genet.39.073003.114725";
  owl:annotatedTarget "Paralogy that results from a duplication preceding a given speciation event.";
  owl:annotatedSource <http://purl.obolibrary.org/obo/HOM_0000024>;
  owl:annotatedProperty <http://purl.obolibrary.org/obo/IAO_0000115> .

<http://purl.obolibrary.org/obo/HOM_0000025> a owl:Class;
  rdfs:label "pro-orthology";
  rdfs:subClassOf <http://purl.obolibrary.org/obo/HOM_0000034>;
  <http://purl.obolibrary.org/obo/IAO_0000115> "1:many orthology that involves a gene in species A and one of its ortholog in species B, when duplications more recent than the species split have occurred in species B but not in species A.";
  <http://www.geneontology.org/formats/oboInOwl#id> "HOM:0000025";
  <http://www.geneontology.org/formats/oboInOwl#hasOBONamespace> "homology_and_related_concepts_in_biology" .

_:36f01e a owl:Axiom;
  owl:annotatedTarget "1:many orthology that involves a gene in species A and one of its ortholog in species B, when duplications more recent than the species split have occurred in species B but not in species A.";
  <http://www.geneontology.org/formats/oboInOwl#hasDbXref> "DOI:10.1006/scdb.1999.0338",
    "DOI:10.1038/nrg2099";
  owl:annotatedSource <http://purl.obolibrary.org/obo/HOM_0000025>;
  owl:annotatedProperty <http://purl.obolibrary.org/obo/IAO_0000115> .

<http://purl.obolibrary.org/obo/HOM_0000026> a owl:Class;
  rdfs:label "semi-orthology";
  rdfs:subClassOf <http://purl.obolibrary.org/obo/HOM_0000034>;
  <http://purl.obolibrary.org/obo/IAO_0000115> "1:many orthology that involves a gene in species A and its ortholog in species B, when duplications more recent than the species split have occurred in species A but not in species B.";
  <http://www.geneontology.org/formats/oboInOwl#id> "HOM:0000026";
  rdfs:comment "The converse of pro-orthologous.";
  <http://www.geneontology.org/formats/oboInOwl#hasOBONamespace> "homology_and_related_concepts_in_biology" .

_:36f02e a owl:Axiom;
  owl:annotatedTarget "1:many orthology that involves a gene in species A and its ortholog in species B, when duplications more recent than the species split have occurred in species A but not in species B.";
  <http://www.geneontology.org/formats/oboInOwl#hasDbXref> "DOI:10.1006/scdb.1999.0338",
    "DOI:10.1038/nrg2099";
  owl:annotatedSource <http://purl.obolibrary.org/obo/HOM_0000026>;
  owl:annotatedProperty <http://purl.obolibrary.org/obo/IAO_0000115> .

<http://purl.obolibrary.org/obo/HOM_0000027> a owl:Class;
  rdfs:label "serial homology";
  rdfs:subClassOf <http://purl.obolibrary.org/obo/HOM_0000066>;
  <http://www.geneontology.org/formats/oboInOwl#id> "HOM:0000027";
  <http://purl.obolibrary.org/obo/IAO_0000115> "Iterative homology that involves structures arranged along the main body axis.";
  <http://www.geneontology.org/formats/oboInOwl#hasOBONamespace> "homology_and_related_concepts_in_biology";
  <http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym> "homonomy" .

_:36f03e a owl:Axiom;
  <http://www.geneontology.org/formats/oboInOwl#hasDbXref> "DOI:10.1146/annurev.es.20.110189.000411";
  owl:annotatedTarget "Iterative homology that involves structures arranged along the main body axis.";
  owl:annotatedSource <http://purl.obolibrary.org/obo/HOM_0000027>;
  owl:annotatedProperty <http://purl.obolibrary.org/obo/IAO_0000115> .

<http://purl.obolibrary.org/obo/HOM_0000028> a owl:Class;
  rdfs:label "heterochronous homology";
  rdfs:subClassOf <http://purl.obolibrary.org/obo/HOM_0000008>;
  <http://purl.obolibrary.org/obo/IAO_0000115> "Biological homology that is characterized by changes, over evolutionary time, in the rate or timing of developmental events of homologous structures.";
  <http://www.geneontology.org/formats/oboInOwl#id> "HOM:0000028";
  <http://www.geneontology.org/formats/oboInOwl#hasExactSynonym> "heterochrony";
  <http://www.geneontology.org/formats/oboInOwl#hasOBONamespace> "homology_and_related_concepts_in_biology" .

_:36f04e a owl:Axiom;
  owl:annotatedTarget "Biological homology that is characterized by changes, over evolutionary time, in the rate or timing of developmental events of homologous structures.";
  <http://www.geneontology.org/formats/oboInOwl#hasDbXref> "ISBN:978-0674639416";
  owl:annotatedSource <http://purl.obolibrary.org/obo/HOM_0000028>;
  owl:annotatedProperty <http://purl.obolibrary.org/obo/IAO_0000115> .

<http://purl.obolibrary.org/obo/HOM_0000029> a owl:Class;
  rdfs:label "paedomorphorsis";
  rdfs:subClassOf <http://purl.obolibrary.org/obo/HOM_0000028>;
  owl:disjointWith <http://purl.obolibrary.org/obo/HOM_0000030>;
  <http://www.geneontology.org/formats/oboInOwl#id> "HOM:0000029";
  <http://purl.obolibrary.org/obo/IAO_0000115> "Heterochronous homology that is produced by a retention in adults of a species of traits previously seen only in juveniles.";
  <http://www.geneontology.org/formats/oboInOwl#hasOBONamespace> "homology_and_related_concepts_in_biology";
  <http://www.geneontology.org/formats/oboInOwl#hasExactSynonym> "juvenification", "pedomorphosis" .

_:36f05e a owl:Axiom;
  owl:annotatedTarget "Heterochronous homology that is produced by a retention in adults of a species of traits previously seen only in juveniles.";
  <http://www.geneontology.org/formats/oboInOwl#hasDbXref> "ISBN:978-0674639416", "http://en.wikipedia.org/wiki/Pedomorphosis";
  owl:annotatedSource <http://purl.obolibrary.org/obo/HOM_0000029>;
  owl:annotatedProperty <http://purl.obolibrary.org/obo/IAO_0000115> .

<http://purl.obolibrary.org/obo/HOM_0000030> a owl:Class;
  rdfs:label "peramorphosis";
  rdfs:subClassOf <http://purl.obolibrary.org/obo/HOM_0000028>;
  <http://www.geneontology.org/formats/oboInOwl#id> "HOM:0000030";
  <http://purl.obolibrary.org/obo/IAO_0000115> "Heterochronous homology that is produced by a maturation of individuals of a species past adulthood, which take on hitherto unseen traits.";
  <http://www.geneontology.org/formats/oboInOwl#hasOBONamespace> "homology_and_related_concepts_in_biology" .

_:36f06e a owl:Axiom;
  owl:annotatedTarget "Heterochronous homology that is produced by a maturation of individuals of a species past adulthood, which take on hitherto unseen traits.";
  <http://www.geneontology.org/formats/oboInOwl#hasDbXref> "http://en.wikipedia.org/wiki/Peramorphosis";
  owl:annotatedSource <http://purl.obolibrary.org/obo/HOM_0000030>;
  owl:annotatedProperty <http://purl.obolibrary.org/obo/IAO_0000115> .

<http://purl.obolibrary.org/obo/HOM_0000031> a owl:Class;
  rdfs:label "progenesis";
  rdfs:subClassOf <http://purl.obolibrary.org/obo/HOM_0000029>;
  <http://www.geneontology.org/formats/oboInOwl#id> "HOM:0000031";
  <http://purl.obolibrary.org/obo/IAO_0000115> "Paedomorphosis that is produced by precocious sexual maturation of an organism still in a morphologically juvenile stage.";
  <http://www.geneontology.org/formats/oboInOwl#hasOBONamespace> "homology_and_related_concepts_in_biology" .

_:36f07e a owl:Axiom;
  <http://www.geneontology.org/formats/oboInOwl#hasDbXref> "ISBN:978-0674639416", "http://en.wikipedia.org/wiki/Progenesis";
  owl:annotatedTarget "Paedomorphosis that is produced by precocious sexual maturation of an organism still in a morphologically juvenile stage.";
  owl:annotatedSource <http://purl.obolibrary.org/obo/HOM_0000031>;
  owl:annotatedProperty <http://purl.obolibrary.org/obo/IAO_0000115> .

<http://purl.obolibrary.org/obo/HOM_0000032> a owl:Class;
  rdfs:label "neoteny";
  rdfs:subClassOf <http://purl.obolibrary.org/obo/HOM_0000029>;
  <http://www.geneontology.org/formats/oboInOwl#id> "HOM:0000032";
  <http://purl.obolibrary.org/obo/IAO_0000115> "Paedomorphosis that is produced by a retardation of somatic development.";
  <http://www.geneontology.org/formats/oboInOwl#hasOBONamespace> "homology_and_related_concepts_in_biology";
  <http://www.geneontology.org/formats/oboInOwl#hasExactSynonym> "juvenilization" .

_:36f08e a owl:Axiom;
  <http://www.geneontology.org/formats/oboInOwl#hasDbXref> "ISBN:978-0674639416", "http://en.wikipedia.org/wiki/Neoteny";
  owl:annotatedTarget "Paedomorphosis that is produced by a retardation of somatic development.";
  owl:annotatedSource <http://purl.obolibrary.org/obo/HOM_0000032>;
  owl:annotatedProperty <http://purl.obolibrary.org/obo/IAO_0000115> .

<http://purl.obolibrary.org/obo/HOM_0000033> a owl:Class;
  rdfs:label "mimicry";
  rdfs:subClassOf <http://purl.obolibrary.org/obo/HOM_0000004>;
  <http://www.geneontology.org/formats/oboInOwl#creation_date> "2009-07-30T11:28:41Z";
  <http://purl.obolibrary.org/obo/IAO_0000115> "Convergence that results from co-evolution usually involving an evolutionary arms race.";
  <http://www.geneontology.org/formats/oboInOwl#id> "HOM:0000033";
  <http://www.geneontology.org/formats/oboInOwl#created_by> "admin";
  <http://www.geneontology.org/formats/oboInOwl#hasOBONamespace> "homology_and_related_concepts_in_biology" .

_:36f09e a owl:Axiom;
  owl:annotatedTarget "Convergence that results from co-evolution usually involving an evolutionary arms race.";
  <http://www.geneontology.org/formats/oboInOwl#hasDbXref> "http:://en.wikipedia.org/wiki/Mimicry";
  owl:annotatedSource <http://purl.obolibrary.org/obo/HOM_0000033>;
  owl:annotatedProperty <http://purl.obolibrary.org/obo/IAO_0000115> .

<http://purl.obolibrary.org/obo/HOM_0000034> a owl:Class;
  rdfs:label "1 to many orthology";
  rdfs:subClassOf <http://purl.obolibrary.org/obo/HOM_0000017>, <http://purl.obolibrary.org/obo/HOM_0000037>;
  <http://www.geneontology.org/formats/oboInOwl#hasExactSynonym> "1:many orthology",
    "one-to-many orthology";
  <http://www.geneontology.org/formats/oboInOwl#id> "HOM:0000034";
  <http://purl.obolibrary.org/obo/IAO_0000115> "Orthology that involves two genes when duplications more recent than the species split have occurred in one species but not the other.";
  <http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym> "co-orthology", "many to 1 orthology";
  <http://www.geneontology.org/formats/oboInOwl#hasOBONamespace> "homology_and_related_concepts_in_biology" .

_:36f0ae a owl:Axiom;
  <http://www.geneontology.org/formats/oboInOwl#hasDbXref> "DOI:10.1038/415741a", "http://www.ensembl.org/info/docs/compara/homology_method.html";
  owl:annotatedTarget "Orthology that involves two genes when duplications more recent than the species split have occurred in one species but not the other.";
  owl:annotatedSource <http://purl.obolibrary.org/obo/HOM_0000034>;
  owl:annotatedProperty <http://purl.obolibrary.org/obo/IAO_0000115> .

<http://purl.obolibrary.org/obo/HOM_0000036> a owl:Class;
  rdfs:label "many to many homology";
  rdfs:subClassOf <http://purl.obolibrary.org/obo/HOM_0000007>;
  <http://www.geneontology.org/formats/oboInOwl#id> "HOM:0000036";
  <http://purl.obolibrary.org/obo/IAO_0000115> "Historical homology that involves two members of a larger set of homologs.";
  <http://www.geneontology.org/formats/oboInOwl#hasOBONamespace> "homology_and_related_concepts_in_biology";
  <http://www.geneontology.org/formats/oboInOwl#hasExactSynonym> "many-to-many homology",
    "many:many homology " .

_:36f0be a owl:Axiom;
  <http://www.geneontology.org/formats/oboInOwl#hasDbXref> "DOI:10.1093/molbev/msp002";
  owl:annotatedTarget "Historical homology that involves two members of a larger set of homologs.";
  owl:annotatedSource <http://purl.obolibrary.org/obo/HOM_0000036>;
  owl:annotatedProperty <http://purl.obolibrary.org/obo/IAO_0000115> .

<http://purl.obolibrary.org/obo/HOM_0000037> a owl:Class;
  rdfs:label "1 to many homology";
  rdfs:subClassOf <http://purl.obolibrary.org/obo/HOM_0000007>;
  <http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym> "1:many homology";
  <http://www.geneontology.org/formats/oboInOwl#id> "HOM:0000037";
  <http://purl.obolibrary.org/obo/IAO_0000115> "Historical homology that involves a structure that has no other homologs in the species in which it is defined, and several homologous structures in another species.";
  <http://www.geneontology.org/formats/oboInOwl#hasOBONamespace> "homology_and_related_concepts_in_biology";
  <http://www.geneontology.org/formats/oboInOwl#hasExactSynonym> "one-to-many homology" .

_:36f0ce a owl:Axiom;
  <http://www.geneontology.org/formats/oboInOwl#hasDbXref> "BGEE:curator";
  owl:annotatedTarget "Historical homology that involves a structure that has no other homologs in the species in which it is defined, and several homologous structures in another species.";
  owl:annotatedSource <http://purl.obolibrary.org/obo/HOM_0000037>;
  owl:annotatedProperty <http://purl.obolibrary.org/obo/IAO_0000115> .

<http://purl.obolibrary.org/obo/HOM_0000042> a owl:Class;
  rdfs:label "apomorphy";
  rdfs:subClassOf <http://purl.obolibrary.org/obo/HOM_0000007>;
  owl:disjointWith <http://purl.obolibrary.org/obo/HOM_0000043>;
  <http://www.geneontology.org/formats/oboInOwl#id> "HOM:0000042";
  <http://purl.obolibrary.org/obo/IAO_0000115> "Historical homology that is based on recent shared ancestry, characterizing a monophyletic group.";
  <http://www.geneontology.org/formats/oboInOwl#hasOBONamespace> "homology_and_related_concepts_in_biology";
  <http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym> "synapomorphy" .

_:36f0de a owl:Axiom;
  owl:annotatedTarget "Historical homology that is based on recent shared ancestry, characterizing a monophyletic group.";
  <http://www.geneontology.org/formats/oboInOwl#hasDbXref> "ISBN:978-0252068140";
  owl:annotatedSource <http://purl.obolibrary.org/obo/HOM_0000042>;
  owl:annotatedProperty <http://purl.obolibrary.org/obo/IAO_0000115> .

<http://purl.obolibrary.org/obo/HOM_0000043> a owl:Class;
  rdfs:label "plesiomorphy";
  rdfs:subClassOf <http://purl.obolibrary.org/obo/HOM_0000007>;
  <http://www.geneontology.org/formats/oboInOwl#id> "HOM:0000043";
  <http://purl.obolibrary.org/obo/IAO_0000115> "Historical homology that is based on distant shared ancestry.";
  rdfs:comment "This term is usually contrasted to apomorphy.";
  <http://www.geneontology.org/formats/oboInOwl#hasOBONamespace> "homology_and_related_concepts_in_biology";
  <http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym> "symplesiomorphy" .

_:36f0ee a owl:Axiom;
  owl:annotatedTarget "Historical homology that is based on distant shared ancestry.";
  <http://www.geneontology.org/formats/oboInOwl#hasDbXref> "ISBN:978-0252068140";
  owl:annotatedSource <http://purl.obolibrary.org/obo/HOM_0000043>;
  owl:annotatedProperty <http://purl.obolibrary.org/obo/IAO_0000115> .

<http://purl.obolibrary.org/obo/HOM_0000044> a owl:Class;
  rdfs:label "deep homology";
  rdfs:subClassOf <http://purl.obolibrary.org/obo/HOM_0000003>, <http://purl.obolibrary.org/obo/HOM_0000005>;
  <http://www.geneontology.org/formats/oboInOwl#id> "HOM:0000044";
  <http://purl.obolibrary.org/obo/IAO_0000115> "Homocracy that involves morphologically and phylogenetically disparate structures that are the result of parallel evolution.";
  rdfs:comment "Used for structures in distantly related taxa.";
  <http://www.geneontology.org/formats/oboInOwl#hasExactSynonym> "deep genetic homology";
  <http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym> "generative homology",
    "homoiology";
  <http://www.geneontology.org/formats/oboInOwl#hasOBONamespace> "homology_and_related_concepts_in_biology" .

_:36f0fe a owl:Axiom;
  <http://www.geneontology.org/formats/oboInOwl#hasDbXref> "DOI:10.1007/BF02814485",
    "DOI:10.1038/nature07891";
  owl:annotatedTarget "Homocracy that involves morphologically and phylogenetically disparate structures that are the result of parallel evolution.";
  owl:annotatedSource <http://purl.obolibrary.org/obo/HOM_0000044>;
  owl:annotatedProperty <http://purl.obolibrary.org/obo/IAO_0000115> .

<http://purl.obolibrary.org/obo/HOM_0000045> a owl:Class;
  rdfs:label "hemiplasy";
  rdfs:subClassOf <http://purl.obolibrary.org/obo/HOM_0000007>;
  <http://www.geneontology.org/formats/oboInOwl#id> "HOM:0000045";
  <http://purl.obolibrary.org/obo/IAO_0000115> "Historical homology that is characterized by topological discordance between a gene tree and a species tree attributable to the phylogenetic sorting of genetic polymorphisms across successive nodes in a species tree.";
  <http://www.geneontology.org/formats/oboInOwl#hasOBONamespace> "homology_and_related_concepts_in_biology" .

_:36f10e a owl:Axiom;
  <http://www.geneontology.org/formats/oboInOwl#hasDbXref> "DOI:10.1073/pnas.0807433105";
  owl:annotatedTarget "Historical homology that is characterized by topological discordance between a gene tree and a species tree attributable to the phylogenetic sorting of genetic polymorphisms across successive nodes in a species tree.";
  owl:annotatedSource <http://purl.obolibrary.org/obo/HOM_0000045>;
  owl:annotatedProperty <http://purl.obolibrary.org/obo/IAO_0000115> .

<http://purl.obolibrary.org/obo/HOM_0000046> a owl:Class;
  rdfs:label "gametology";
  rdfs:subClassOf <http://purl.obolibrary.org/obo/HOM_0000047>;
  <http://www.geneontology.org/formats/oboInOwl#id> "HOM:0000046";
  <http://purl.obolibrary.org/obo/IAO_0000115> "Historical homology that involves not recombining and subsequently differentiated sex chromosomes.";
  <http://www.geneontology.org/formats/oboInOwl#hasOBONamespace> "homology_and_related_concepts_in_biology" .

_:36f11e a owl:Axiom;
  owl:annotatedTarget "Historical homology that involves not recombining and subsequently differentiated sex chromosomes.";
  <http://www.geneontology.org/formats/oboInOwl#hasDbXref> "PMID:11110898";
  owl:annotatedSource <http://purl.obolibrary.org/obo/HOM_0000046>;
  owl:annotatedProperty <http://purl.obolibrary.org/obo/IAO_0000115> .

<http://purl.obolibrary.org/obo/HOM_0000047> a owl:Class;
  rdfs:label "chromosomal homology";
  rdfs:subClassOf <http://purl.obolibrary.org/obo/HOM_0000007>;
  <http://www.geneontology.org/formats/oboInOwl#id> "HOM:0000047";
  <http://purl.obolibrary.org/obo/IAO_0000115> "Historical homology that involves the chromosomes able to pair (synapse) during meiosis.";
  <http://www.geneontology.org/formats/oboInOwl#hasDbXref> "MeSH:Chromosome Pairing";
  <http://www.geneontology.org/formats/oboInOwl#hasOBONamespace> "homology_and_related_concepts_in_biology" .

_:36f12e a owl:Axiom;
  owl:annotatedTarget "Historical homology that involves the chromosomes able to pair (synapse) during meiosis.";
  <http://www.geneontology.org/formats/oboInOwl#hasDbXref> "ISBN:0195307615";
  owl:annotatedSource <http://purl.obolibrary.org/obo/HOM_0000047>;
  owl:annotatedProperty <http://purl.obolibrary.org/obo/IAO_0000115> .

<http://purl.obolibrary.org/obo/HOM_0000048> a owl:Class;
  rdfs:label "many to many orthology";
  rdfs:subClassOf <http://purl.obolibrary.org/obo/HOM_0000017>, <http://purl.obolibrary.org/obo/HOM_0000036>;
  <http://www.geneontology.org/formats/oboInOwl#id> "HOM:0000048";
  <http://purl.obolibrary.org/obo/IAO_0000115> "Orthology that involves two genes that experienced duplications more recent than the species split that created them.";
  <http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym> "co-orthology", "trans-homology";
  <http://www.geneontology.org/formats/oboInOwl#hasOBONamespace> "homology_and_related_concepts_in_biology";
  <http://www.geneontology.org/formats/oboInOwl#hasExactSynonym> "many-to-many orthology",
    "many:many orthology", "trans-orthology" .

_:36f13e a owl:Axiom;
  <http://www.geneontology.org/formats/oboInOwl#hasDbXref> "DOI:10.1038/415741a", "http://www.ensembl.org/info/docs/compara/homology_method.html";
  owl:annotatedTarget "Orthology that involves two genes that experienced duplications more recent than the species split that created them.";
  owl:annotatedSource <http://purl.obolibrary.org/obo/HOM_0000048>;
  owl:annotatedProperty <http://purl.obolibrary.org/obo/IAO_0000115> .

<http://purl.obolibrary.org/obo/HOM_0000049> a owl:Class;
  rdfs:label "within-species paralogy";
  rdfs:subClassOf <http://purl.obolibrary.org/obo/HOM_0000011>;
  owl:disjointWith <http://purl.obolibrary.org/obo/HOM_0000050>;
  <http://www.geneontology.org/formats/oboInOwl#id> "HOM:0000049";
  <http://purl.obolibrary.org/obo/IAO_0000115> "Paralogy that involves genes from the same species.";
  <http://www.geneontology.org/formats/oboInOwl#hasOBONamespace> "homology_and_related_concepts_in_biology" .

_:36f14e a owl:Axiom;
  owl:annotatedTarget "Paralogy that involves genes from the same species.";
  <http://www.geneontology.org/formats/oboInOwl#hasDbXref> "http://www.ensembl.org/info/docs/compara/homology_method.html";
  owl:annotatedSource <http://purl.obolibrary.org/obo/HOM_0000049>;
  owl:annotatedProperty <http://purl.obolibrary.org/obo/IAO_0000115> .

<http://purl.obolibrary.org/obo/HOM_0000050> a owl:Class;
  rdfs:label "between-species paralogy";
  rdfs:subClassOf <http://purl.obolibrary.org/obo/HOM_0000011>;
  <http://www.geneontology.org/formats/oboInOwl#id> "HOM:0000050";
  <http://purl.obolibrary.org/obo/IAO_0000115> "Paralogy that involves genes from different species.";
  rdfs:comment "The genes have diverged before a speciation event.";
  <http://www.geneontology.org/formats/oboInOwl#hasOBONamespace> "homology_and_related_concepts_in_biology" .

_:36f15e a owl:Axiom;
  owl:annotatedTarget "Paralogy that involves genes from different species.";
  <http://www.geneontology.org/formats/oboInOwl#hasDbXref> "http://www.ensembl.org/info/docs/compara/homology_method.html";
  owl:annotatedSource <http://purl.obolibrary.org/obo/HOM_0000050>;
  owl:annotatedProperty <http://purl.obolibrary.org/obo/IAO_0000115> .

<http://purl.obolibrary.org/obo/HOM_0000051> a owl:Class;
  rdfs:label "postdisplacement";
  rdfs:subClassOf <http://purl.obolibrary.org/obo/HOM_0000029>;
  <http://www.geneontology.org/formats/oboInOwl#id> "HOM:0000051";
  <http://purl.obolibrary.org/obo/IAO_0000115> "Paedomorphosis that is produced by delayed growth of immature structures into the adult form.";
  <http://www.geneontology.org/formats/oboInOwl#hasOBONamespace> "homology_and_related_concepts_in_biology";
  <http://www.geneontology.org/formats/oboInOwl#hasExactSynonym> "post-displacement" .

_:36f16e a owl:Axiom;
  owl:annotatedTarget "Paedomorphosis that is produced by delayed growth of immature structures into the adult form.";
  <http://www.geneontology.org/formats/oboInOwl#hasDbXref> "http://en.wikipedia.org/wiki/Pedomorphosis";
  owl:annotatedSource <http://purl.obolibrary.org/obo/HOM_0000051>;
  owl:annotatedProperty <http://purl.obolibrary.org/obo/IAO_0000115> .

<http://purl.obolibrary.org/obo/HOM_0000052> a owl:Class;
  rdfs:label "hypermorphosis";
  rdfs:subClassOf <http://purl.obolibrary.org/obo/HOM_0000030>;
  <http://www.geneontology.org/formats/oboInOwl#id> "HOM:0000052";
  <http://purl.obolibrary.org/obo/IAO_0000115> "Peramorphosis that is produced by a delay in the offset of development.";
  <http://www.geneontology.org/formats/oboInOwl#hasOBONamespace> "homology_and_related_concepts_in_biology" .

_:36f17e a owl:Axiom;
  <http://www.geneontology.org/formats/oboInOwl#hasDbXref> "ISBN:978-0674639416", "http://en.wikipedia.org/wiki/Peramorphosis";
  owl:annotatedTarget "Peramorphosis that is produced by a delay in the offset of development.";
  owl:annotatedSource <http://purl.obolibrary.org/obo/HOM_0000052>;
  owl:annotatedProperty <http://purl.obolibrary.org/obo/IAO_0000115> .

<http://purl.obolibrary.org/obo/HOM_0000053> a owl:Class;
  rdfs:label "synology";
  rdfs:subClassOf <http://purl.obolibrary.org/obo/HOM_0000018>;
  <http://www.geneontology.org/formats/oboInOwl#id> "HOM:0000053";
  <http://purl.obolibrary.org/obo/IAO_0000115> "Xenology that results, not from the transfer of a gene between two species, but from a hybridization of two species.";
  <http://www.geneontology.org/formats/oboInOwl#hasOBONamespace> "homology_and_related_concepts_in_biology" .

_:36f18e a owl:Axiom;
  <http://www.geneontology.org/formats/oboInOwl#hasDbXref> "DOI:10.1007/BF00173425",
    "DOI:10.1016/S0168-9525(00)02005-9";
  owl:annotatedTarget "Xenology that results, not from the transfer of a gene between two species, but from a hybridization of two species.";
  owl:annotatedSource <http://purl.obolibrary.org/obo/HOM_0000053>;
  owl:annotatedProperty <http://purl.obolibrary.org/obo/IAO_0000115> .

<http://purl.obolibrary.org/obo/HOM_0000054> a owl:Class;
  rdfs:label "isoorthology";
  rdfs:subClassOf <http://purl.obolibrary.org/obo/HOM_0000017>, <http://purl.obolibrary.org/obo/HOM_0000062>;
  <http://www.geneontology.org/formats/oboInOwl#hasDbXref> "ECO:0000080";
  <http://www.geneontology.org/formats/oboInOwl#id> "HOM:0000054";
  <http://purl.obolibrary.org/obo/IAO_0000115> "Orthology that involves functional equivalent genes with retention of the ancestral function.";
  <http://www.geneontology.org/formats/oboInOwl#hasOBONamespace> "homology_and_related_concepts_in_biology" .

_:36f19e a owl:Axiom;
  <http://www.geneontology.org/formats/oboInOwl#hasDbXref> "DOI:10.1016/S0168-9525(00)02005-9";
  owl:annotatedTarget "Orthology that involves functional equivalent genes with retention of the ancestral function.";
  owl:annotatedSource <http://purl.obolibrary.org/obo/HOM_0000054>;
  owl:annotatedProperty <http://purl.obolibrary.org/obo/IAO_0000115> .

_:36f1ae a owl:Axiom;
  rdfs:label "inferred from phylogeny";
  owl:annotatedTarget "ECO:0000080";
  owl:annotatedSource <http://purl.obolibrary.org/obo/HOM_0000054>;
  owl:annotatedProperty <http://www.geneontology.org/formats/oboInOwl#hasDbXref> .

<http://purl.obolibrary.org/obo/HOM_0000055> a owl:Class;
  rdfs:label "tandem paralogy";
  rdfs:subClassOf <http://purl.obolibrary.org/obo/HOM_0000011>;
  <http://www.geneontology.org/formats/oboInOwl#id> "HOM:0000055";
  <http://purl.obolibrary.org/obo/IAO_0000115> "Paralogy that is characterized by duplication of adjacent sequences on a chromosome segment.";
  <http://www.geneontology.org/formats/oboInOwl#hasOBONamespace> "homology_and_related_concepts_in_biology";
  <http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym> "iterative paralogy",
    "serial paralogy" .

_:36f1be a owl:Axiom;
  <http://www.geneontology.org/formats/oboInOwl#hasDbXref> "DOI:10.1016/S0168-9525(00)02005-9",
    "ISBN:978-0878932665";
  owl:annotatedTarget "Paralogy that is characterized by duplication of adjacent sequences on a chromosome segment.";
  owl:annotatedSource <http://purl.obolibrary.org/obo/HOM_0000055>;
  owl:annotatedProperty <http://purl.obolibrary.org/obo/IAO_0000115> .

<http://purl.obolibrary.org/obo/HOM_0000057> a owl:Class;
  rdfs:label "latent homology";
  rdfs:subClassOf <http://purl.obolibrary.org/obo/HOM_0000005>, <http://purl.obolibrary.org/obo/HOM_0000058>;
  <http://www.geneontology.org/formats/oboInOwl#id> "HOM:0000057";
  <http://purl.obolibrary.org/obo/IAO_0000115> "Parallelism that involves morphologically very similar structures, occurring only within some members of a taxon and absent in the common ancestor (which possessed the developmental basis to develop this character).";
  rdfs:comment "Used for structures in closely related taxa.";
  <http://www.geneontology.org/formats/oboInOwl#hasExactSynonym> "apomorphic tendency",
    "cryptic homology", "underlying synapomorphy";
  <http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym> "homoiology", "homoplastic tendency",
    "re-awakening";
  <http://www.geneontology.org/formats/oboInOwl#hasOBONamespace> "homology_and_related_concepts_in_biology" .

_:36f1ce a owl:Axiom;
  <http://www.geneontology.org/formats/oboInOwl#hasDbXref> "DOI:10.1007/BF02814485",
    "DOI:10.1016/j.jhevol.2006.11.010", "DOI:10.1186/1742-9994-2-15", "ISBN:0199141118";
  owl:annotatedTarget "Parallelism that involves morphologically very similar structures, occurring only within some members of a taxon and absent in the common ancestor (which possessed the developmental basis to develop this character).";
  owl:annotatedSource <http://purl.obolibrary.org/obo/HOM_0000057>;
  owl:annotatedProperty <http://purl.obolibrary.org/obo/IAO_0000115> .

<http://purl.obolibrary.org/obo/HOM_0000058> a owl:Class;
  rdfs:label "syngeny";
  rdfs:subClassOf <http://purl.obolibrary.org/obo/HOM_0000003>;
  rdfs:comment "Cannot be used when orthologous patterning gene are organizing obviously non-homologous structures in different organisms due for example to pleiotropic functions of these genes.";
  <http://www.geneontology.org/formats/oboInOwl#id> "HOM:0000058";
  <http://purl.obolibrary.org/obo/IAO_0000115> "Homocracy that involves recognizably corresponding characters that occurs in two or more taxa, or as a repeated unit within an individual.";
  <http://www.geneontology.org/formats/oboInOwl#hasExactSynonym> "generative homology";
  <http://www.geneontology.org/formats/oboInOwl#hasOBONamespace> "homology_and_related_concepts_in_biology" .

_:36f1de a owl:Axiom;
  <http://www.geneontology.org/formats/oboInOwl#hasDbXref> "DOI:10.1002/1521-1878(200009)22:9<846::AID-BIES10>3.0.CO;2-R",
    "DOI:10.1186/1742-9994-2-15";
  owl:annotatedTarget "Homocracy that involves recognizably corresponding characters that occurs in two or more taxa, or as a repeated unit within an individual.";
  owl:annotatedSource <http://purl.obolibrary.org/obo/HOM_0000058>;
  owl:annotatedProperty <http://purl.obolibrary.org/obo/IAO_0000115> .

<http://purl.obolibrary.org/obo/HOM_0000060> a owl:Class;
  rdfs:label "apparent orthology";
  rdfs:subClassOf <http://purl.obolibrary.org/obo/HOM_0000019>, <http://purl.obolibrary.org/obo/HOM_0000050>;
  <http://www.geneontology.org/formats/oboInOwl#hasExactSynonym> "1:1 paralogy", "apparent 1:1 orthology",
    "pseudoorthology";
  <http://purl.obolibrary.org/obo/IAO_0000115> "Between-species paralogy that involves single copy paralogs resulting from reciprocal gene loss.";
  <http://www.geneontology.org/formats/oboInOwl#id> "HOM:0000060";
  rdfs:comment "The genes are actually paralogs but appear to be orthologous due to differential, lineage-specific gene loss.";
  <http://www.geneontology.org/formats/oboInOwl#hasOBONamespace> "homology_and_related_concepts_in_biology" .

_:36f1ee a owl:Axiom;
  owl:annotatedTarget "Between-species paralogy that involves single copy paralogs resulting from reciprocal gene loss.";
  <http://www.geneontology.org/formats/oboInOwl#hasDbXref> "DOI:10.1146/annurev.genet.39.073003.114725",
    "http://www.ensembl.org/info/docs/compara/homology_method.html";
  owl:annotatedSource <http://purl.obolibrary.org/obo/HOM_0000060>;
  owl:annotatedProperty <http://purl.obolibrary.org/obo/IAO_0000115> .

<http://purl.obolibrary.org/obo/HOM_0000061> a owl:Class;
  rdfs:label "pseudoparalogy";
  rdfs:subClassOf <http://purl.obolibrary.org/obo/HOM_0000018>;
  <http://www.geneontology.org/formats/oboInOwl#id> "HOM:0000061";
  rdfs:comment "These genes may come out as paralogs in a single-genome analysis.";
  <http://purl.obolibrary.org/obo/IAO_0000115> "Xenology that involves genes that ended up in a given genome as a result of a combination of vertical inheritance and horizontal gene transfer.";
  <http://www.geneontology.org/formats/oboInOwl#hasOBONamespace> "homology_and_related_concepts_in_biology" .

_:36f1fe a owl:Axiom;
  <http://www.geneontology.org/formats/oboInOwl#hasDbXref> "DOI:10.1146/annurev.genet.39.073003.114725";
  owl:annotatedTarget "Xenology that involves genes that ended up in a given genome as a result of a combination of vertical inheritance and horizontal gene transfer.";
  owl:annotatedSource <http://purl.obolibrary.org/obo/HOM_0000061>;
  owl:annotatedProperty <http://purl.obolibrary.org/obo/IAO_0000115> .

<http://purl.obolibrary.org/obo/HOM_0000062> a owl:Class;
  rdfs:label "equivalogy";
  rdfs:subClassOf <http://purl.obolibrary.org/obo/HOM_0000007>, <http://purl.obolibrary.org/obo/HOM_0000065>;
  <http://www.geneontology.org/formats/oboInOwl#id> "HOM:0000062";
  <http://purl.obolibrary.org/obo/IAO_0000115> "Historical homology that involves functional equivalent genes with retention of the ancestral function.";
  rdfs:comment "This may include examples of orthology, paralogy and xenology.";
  <http://www.geneontology.org/formats/oboInOwl#hasOBONamespace> "homology_and_related_concepts_in_biology" .

_:36f20e a owl:Axiom;
  <http://www.geneontology.org/formats/oboInOwl#hasDbXref> "DOI:10.1093/nar/gkl1043";
  owl:annotatedTarget "Historical homology that involves functional equivalent genes with retention of the ancestral function.";
  owl:annotatedSource <http://purl.obolibrary.org/obo/HOM_0000062>;
  owl:annotatedProperty <http://purl.obolibrary.org/obo/IAO_0000115> .

<http://purl.obolibrary.org/obo/HOM_0000063> a owl:Class;
  rdfs:label "interology";
  rdfs:subClassOf <http://purl.obolibrary.org/obo/HOM_0000007>;
  <http://www.geneontology.org/formats/oboInOwl#id> "HOM:0000063";
  <http://purl.obolibrary.org/obo/IAO_0000115> "Historical homology that involves orthologous pairs of interacting molecules in different organisms.";
  <http://www.geneontology.org/formats/oboInOwl#hasOBONamespace> "homology_and_related_concepts_in_biology" .

_:36f21e a owl:Axiom;
  <http://www.geneontology.org/formats/oboInOwl#hasDbXref> "DOI:10.1101/gr.1774904",
    "DOI:10.1126/science.287.5450.116";
  owl:annotatedTarget "Historical homology that involves orthologous pairs of interacting molecules in different organisms.";
  owl:annotatedSource <http://purl.obolibrary.org/obo/HOM_0000063>;
  owl:annotatedProperty <http://purl.obolibrary.org/obo/IAO_0000115> .

<http://purl.obolibrary.org/obo/HOM_0000065> a owl:Class;
  rdfs:label "functional equivalence";
  rdfs:subClassOf <http://purl.obolibrary.org/obo/HOM_0000000>;
  <http://www.geneontology.org/formats/oboInOwl#id> "HOM:0000065";
  <http://purl.obolibrary.org/obo/IAO_0000115> "Similarity that is characterized by interchangeability in function.";
  <http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym> "functional similarity";
  <http://www.geneontology.org/formats/oboInOwl#hasOBONamespace> "homology_and_related_concepts_in_biology" .

_:36f22e a owl:Axiom;
  <http://www.geneontology.org/formats/oboInOwl#hasDbXref> "DOI:10.1007/BF02814484",
    "DOI:10.1038/415741a";
  owl:annotatedTarget "Similarity that is characterized by interchangeability in function.";
  owl:annotatedSource <http://purl.obolibrary.org/obo/HOM_0000065>;
  owl:annotatedProperty <http://purl.obolibrary.org/obo/IAO_0000115> .

<http://purl.obolibrary.org/obo/HOM_0000066> a owl:Class;
  rdfs:label "iterative homology";
  rdfs:subClassOf <http://purl.obolibrary.org/obo/HOM_0000008>;
  <http://purl.obolibrary.org/obo/IAO_0000115> "Biological homology that involves parts of the same organism.";
  <http://www.geneontology.org/formats/oboInOwl#id> "HOM:0000066";
  <http://www.geneontology.org/formats/oboInOwl#hasOBONamespace> "homology_and_related_concepts_in_biology" .

_:36f23e a owl:Axiom;
  owl:annotatedTarget "Biological homology that involves parts of the same organism.";
  <http://www.geneontology.org/formats/oboInOwl#hasDbXref> "DOI:10.1146/annurev.es.20.110189.000411";
  owl:annotatedSource <http://purl.obolibrary.org/obo/HOM_0000066>;
  owl:annotatedProperty <http://purl.obolibrary.org/obo/IAO_0000115> .

<http://purl.obolibrary.org/obo/HOM_0000068> a owl:Class;
  rdfs:label "paraxenology";
  rdfs:subClassOf <http://purl.obolibrary.org/obo/HOM_0000018>;
  <http://www.geneontology.org/formats/oboInOwl#id> "HOM:0000068";
  <http://purl.obolibrary.org/obo/IAO_0000115> "Xenology that is characterized by multiple horizontal transfer events, resulting in the presence of two or more copies of the foreign gene in the host genome.";
  <http://www.geneontology.org/formats/oboInOwl#hasExactSynonym> "duplicate xenology",
    "multiple xenology";
  <http://www.geneontology.org/formats/oboInOwl#hasOBONamespace> "homology_and_related_concepts_in_biology" .

_:36f24e a owl:Axiom;
  <http://www.geneontology.org/formats/oboInOwl#hasDbXref> "PMID:3065587";
  owl:annotatedTarget "Xenology that is characterized by multiple horizontal transfer events, resulting in the presence of two or more copies of the foreign gene in the host genome.";
  owl:annotatedSource <http://purl.obolibrary.org/obo/HOM_0000068>;
  owl:annotatedProperty <http://purl.obolibrary.org/obo/IAO_0000115> .

<http://purl.obolibrary.org/obo/HOM_0000069> a owl:Class;
  rdfs:label "plerology";
  rdfs:subClassOf <http://purl.obolibrary.org/obo/HOM_0000011>;
  <http://www.geneontology.org/formats/oboInOwl#id> "HOM:0000069";
  <http://purl.obolibrary.org/obo/IAO_0000115> "Paralogy that is characterized by extra similarity between paralogous sequences resulting from concerted evolution.";
  rdfs:comment "This phenomenon is usually due to gene conversion process.";
  <http://www.geneontology.org/formats/oboInOwl#hasOBONamespace> "homology_and_related_concepts_in_biology" .

_:36f25e a owl:Axiom;
  <http://www.geneontology.org/formats/oboInOwl#hasDbXref> "PMID:3065587";
  owl:annotatedTarget "Paralogy that is characterized by extra similarity between paralogous sequences resulting from concerted evolution.";
  owl:annotatedSource <http://purl.obolibrary.org/obo/HOM_0000069>;
  owl:annotatedProperty <http://purl.obolibrary.org/obo/IAO_0000115> .

<http://purl.obolibrary.org/obo/HOM_0000071> a owl:Class;
  rdfs:label "homotopy";
  rdfs:subClassOf <http://purl.obolibrary.org/obo/HOM_0000006>;
  owl:disjointWith <http://purl.obolibrary.org/obo/HOM_0000072>;
  <http://www.geneontology.org/formats/oboInOwl#id> "HOM:0000071";
  <http://purl.obolibrary.org/obo/IAO_0000115> "Structural homology that involves structures with the same or similar relative positions.";
  rdfs:comment "Theissen (2005) mentions that some authors may consider homotopy to be distinct from homology, but this is not the standard use.";
  <http://www.geneontology.org/formats/oboInOwl#hasOBONamespace> "homology_and_related_concepts_in_biology" .

_:36f26e a owl:Axiom;
  <http://www.geneontology.org/formats/oboInOwl#hasDbXref> "DOI:10.1007/BF02814484",
    "DOI:10.1007/BF02814485", "ISBN:0123195837";
  owl:annotatedTarget "Structural homology that involves structures with the same or similar relative positions.";
  owl:annotatedSource <http://purl.obolibrary.org/obo/HOM_0000071>;
  owl:annotatedProperty <http://purl.obolibrary.org/obo/IAO_0000115> .

<http://purl.obolibrary.org/obo/HOM_0000072> a owl:Class;
  rdfs:label "homeosis";
  rdfs:subClassOf <http://purl.obolibrary.org/obo/HOM_0000008>;
  <http://purl.obolibrary.org/obo/IAO_0000115> "Biological homology that involves an ectopic structure and the normally positioned structure.";
  <http://www.geneontology.org/formats/oboInOwl#id> "HOM:0000072";
  <http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym> "heterotopy";
  <http://www.geneontology.org/formats/oboInOwl#hasOBONamespace> "homology_and_related_concepts_in_biology" .

_:36f27e a owl:Axiom;
  owl:annotatedTarget "Biological homology that involves an ectopic structure and the normally positioned structure.";
  <http://www.geneontology.org/formats/oboInOwl#hasDbXref> "DOI:10.1007/BF02814485",
    "DOI:10.1016/j.cell.2008.06.030";
  owl:annotatedSource <http://purl.obolibrary.org/obo/HOM_0000072>;
  owl:annotatedProperty <http://purl.obolibrary.org/obo/IAO_0000115> .

<http://purl.obolibrary.org/obo/HOM_0000073> a owl:Class;
  rdfs:label "homoeology";
  rdfs:subClassOf <http://purl.obolibrary.org/obo/HOM_0000022>, <http://purl.obolibrary.org/obo/HOM_0000053>;
  <http://www.geneontology.org/formats/oboInOwl#id> "HOM:0000073";
  rdfs:comment "On a long term, it is hard to distinguish allopolyploidy from whole genome duplication.";
  <http://purl.obolibrary.org/obo/IAO_0000115> "Synology that results from allopolyploidy.";
  <http://www.geneontology.org/formats/oboInOwl#hasOBONamespace> "homology_and_related_concepts_in_biology" .

_:36f28e a owl:Axiom;
  <http://www.geneontology.org/formats/oboInOwl#hasDbXref> "DOI:10.1073/pnas.0505156102";
  owl:annotatedTarget "Synology that results from allopolyploidy.";
  owl:annotatedSource <http://purl.obolibrary.org/obo/HOM_0000073>;
  owl:annotatedProperty <http://purl.obolibrary.org/obo/IAO_0000115> .

<http://purl.obolibrary.org/obo/HOM_0000074> a owl:Class;
  rdfs:label "paramorphism";
  rdfs:subClassOf <http://purl.obolibrary.org/obo/HOM_0000003>, <http://purl.obolibrary.org/obo/HOM_0000066>;
  <http://www.geneontology.org/formats/oboInOwl#id> "HOM:0000074";
  <http://purl.obolibrary.org/obo/IAO_0000115> "Iterative homology that involves two structures, one of which originated as a duplicate of the other and co-opted the expression of patterning genes of the ancestral structure.";
  <http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym> "axis paramorphism";
  <http://www.geneontology.org/formats/oboInOwl#hasOBONamespace> "homology_and_related_concepts_in_biology" .

_:36f29e a owl:Axiom;
  <http://www.geneontology.org/formats/oboInOwl#hasDbXref> "DOI:10.1007/s10441-007-9023-8",
    "DOI:10.1046/j.1525-142x.2000.00054.x";
  owl:annotatedTarget "Iterative homology that involves two structures, one of which originated as a duplicate of the other and co-opted the expression of patterning genes of the ancestral structure.";
  owl:annotatedSource <http://purl.obolibrary.org/obo/HOM_0000074>;
  owl:annotatedProperty <http://purl.obolibrary.org/obo/IAO_0000115> .

<http://purl.obolibrary.org/obo/HOM_0000075> a owl:Class;
  rdfs:label "regulogy";
  rdfs:subClassOf <http://purl.obolibrary.org/obo/HOM_0000007>;
  <http://www.geneontology.org/formats/oboInOwl#id> "HOM:0000075";
  <http://purl.obolibrary.org/obo/IAO_0000115> "Historical homology that involves orthologous pairs of transcription factors and downstream regulated genes in different organisms.";
  <http://www.geneontology.org/formats/oboInOwl#hasOBONamespace> "homology_and_related_concepts_in_biology" .

_:36f2ae a owl:Axiom;
  <http://www.geneontology.org/formats/oboInOwl#hasDbXref> "DOI:10.1101/gr.1774904";
  owl:annotatedTarget "Historical homology that involves orthologous pairs of transcription factors and downstream regulated genes in different organisms.";
  owl:annotatedSource <http://purl.obolibrary.org/obo/HOM_0000075>;
  owl:annotatedProperty <http://purl.obolibrary.org/obo/IAO_0000115> .