PREFIX obo:
PREFIX rdf:
PREFIX rdfs:
PREFIX xsd:
obo:NCBITaxon_376913 a rdfs:Class ;
rdfs:label "Haplorrhini" ;
rdfs:subClassOf obo:NCBITaxon_9443 .
obo:RO_0001000 a rdf:Property ;
rdfs:label "derives from"@en ;
rdfs:comment "a relation between two distinct material entities, the new entity and the old entity, in which the new entity begins to exist when the old entity ceases to exist, and the new entity inherits the significant portion of the matter of the old entity"@en ;
rdfs:domain obo:BFO_0000004 ;
rdfs:range obo:BFO_0000004 , obo:CL_0000236 .
obo:IAO_0000235 a rdf:Property ;
rdfs:label "denoted by"@en ;
rdfs:comment "inverse of the relation 'denotes'"@en ;
rdfs:domain obo:BFO_0000001 ;
rdfs:range obo:IAO_0000030 .
obo:RO_0000087 a rdf:Property ;
rdfs:label "has role"@en ;
rdfs:comment "a relation between an independent continuant (the bearer) and a role, in which the role specifically depends on the bearer for its existence"@en ;
rdfs:domain obo:BFO_0000004 ;
rdfs:range obo:BFO_0000023 ;
rdfs:subPropertyOf obo:RO_0000053 .
obo:RO_0000085 a rdf:Property ;
rdfs:label "has function"@en ;
rdfs:comment "a relation between an independent continuant (the bearer) and a function, in which the function specifically depends on the bearer for its existence"@en ;
rdfs:domain obo:BFO_0000004 ;
rdfs:range obo:BFO_0000034 ;
rdfs:subPropertyOf obo:RO_0000053 .
obo:RO_0000091 a rdf:Property ;
rdfs:label "has disposition"@en ;
rdfs:comment "a relation between an independent continuant (the bearer) and a disposition, in which the disposition specifically depends on the bearer for its existence"@en ;
rdfs:domain obo:BFO_0000004 ;
rdfs:range obo:BFO_0000016 ;
rdfs:subPropertyOf obo:RO_0000053 .
obo:RO_0000056 a rdf:Property ;
rdfs:label "participates in"@en ;
rdfs:comment "a relation between a continuant and a process, in which the continuant is somehow involved in the process"@en ;
rdfs:domain obo:BFO_0000002 ;
rdfs:range obo:BFO_0000003 .
obo:RO_0002002 a rdf:Property ;
rdfs:label "has 2D boundary"@en ;
rdfs:comment "a relation between a material entity and a 2D immaterial entity (the boundary), in which the boundary delimits the material entity"@en ;
rdfs:domain obo:BFO_0000040 ;
rdfs:range obo:BFO_0000141 .
obo:RO_0001025 a rdf:Property ;
rdfs:label "located in"@en ;
rdfs:comment "a relation between two independent continuants, the target and the location, in which the target is entirely within the location"@en ;
rdfs:domain obo:BFO_0000004 ;
rdfs:range .
obo:NCBITaxon_117571 a rdfs:Class ;
rdfs:label "Euteleostomi" ;
rdfs:subClassOf obo:NCBITaxon_117570 .
obo:OBI_0000094 a rdfs:Class ;
rdfs:label "material processing"@en ;
rdfs:comment "A planned process which results in physical changes in a specified input material"@en ;
rdfs:subClassOf obo:OBI_0000011 .
obo:OBI_0000293 a rdf:Property ;
rdfs:label "has_specified_input"@en ;
rdfs:comment "A relation between a planned process and a continuant participating in that process that is not created during the process. The presence of the continuant during the process is explicitly specified in the plan specification which the process realizes the concretization of."@en ;
rdfs:domain obo:OBI_0000011 ;
rdfs:range obo:BFO_0000040 , obo:IAO_0000027 , obo:BFO_0000002 , obo:OBI_0000648 ;
rdfs:subPropertyOf obo:RO_0000057 .
obo:OBI_0000299 a rdf:Property ;
rdfs:label "has_specified_output"@en ;
rdfs:comment "A relation between a planned process and a continuant participating in that process. The presence of the continuant at the end of the process is explicitly specified in the objective specification which the process realizes the concretization of."@en ;
rdfs:domain obo:OBI_0000011 ;
rdfs:range obo:BFO_0000002 ;
rdfs:subPropertyOf obo:RO_0000057 .
obo:OBI_0000417 a rdf:Property ;
rdfs:label "achieves_planned_objective" ;
rdfs:comment "This relation obtains between a planned process and a objective specification when the criteria specified in the objective specification are met at the end of the planned process." ;
rdfs:domain obo:OBI_0000011 ;
rdfs:range obo:IAO_0000005 .
obo:BFO_0000055 a rdf:Property ;
rdfs:label "realizes"@en ;
rdfs:comment "Paraphrase of elucidation: a relation between a process and a realizable entity, where there is some material entity that is bearer of the realizable entity and participates in the process, and the realizable entity comes to be realized in the course of the process" ;
rdfs:domain obo:BFO_0000015 ;
rdfs:range obo:BFO_0000017 .
obo:BFO_0000034 a rdfs:Class ;
rdfs:label "function"@en ;
rdfs:subClassOf obo:BFO_0000016 .
obo:RO_0000059 a rdf:Property ;
rdfs:label "concretizes"@en ;
rdfs:comment "A relationship between a specifically dependent continuant and a generically dependent continuant, in which the generically dependent continuant depends on some independent continuant in virtue of the fact that the specifically dependent continuant also depends on that same independent continuant. Multiple specifically dependent continuants can concretize the same generically dependent continuant."@en ;
rdfs:domain obo:BFO_0000020 ;
rdfs:range obo:BFO_0000031 .
obo:RO_0000079 a rdf:Property ;
rdfs:label "function of"@en ;
rdfs:comment "a relation between a function and an independent continuant (the bearer), in which the function specifically depends on the bearer for its existence"@en ;
rdfs:domain obo:BFO_0000034 ;
rdfs:range ;
rdfs:subPropertyOf obo:RO_0000052 .
obo:BFO_0000054 a rdf:Property ;
rdfs:label "realized in"@en ;
rdfs:comment "Paraphrase of elucidation: a relation between a realizable entity and a process, where there is some material entity that is bearer of the realizable entity and participates in the process, and the realizable entity comes to be realized in the course of the process" ;
rdfs:domain obo:BFO_0000017 ;
rdfs:range obo:BFO_0000015 , obo:OBI_0000011 , obo:OBI_0000457 , obo:OBI_0000070 .
obo:UBERON_0000465 a rdfs:Class ;
rdfs:label "material anatomical entity" ;
rdfs:comment "Anatomical entity that has mass." ;
rdfs:subClassOf obo:BFO_0000040 .
obo:NCBITaxon_6072 a rdfs:Class ;
rdfs:label "Eumetazoa" ;
rdfs:subClassOf obo:NCBITaxon_33208 .
obo:IAO_0000009 a rdfs:Class ;
rdfs:label "datum label"@en ;
rdfs:comment "A label is a symbol that is part of some other datum and is used to either partially define the denotation of that datum or to provide a means for identifying the datum as a member of the set of data with the same label"@en ;
rdfs:subClassOf obo:IAO_0000030 .
obo:OBI_0001938 a rdf:Property ;
rdfs:label "has value specification" ;
rdfs:comment "A relation between an information content entity and a value specification that specifies its value." ;
rdfs:domain obo:IAO_0000030 ;
rdfs:range obo:OBI_0001933 ;
rdfs:subPropertyOf obo:BFO_0000051 .
obo:IAO_0000219 a rdf:Property ;
rdfs:label "denotes"@en ;
rdfs:comment "denotes is a primitive, instance-level, relation obtaining between an information content entity and some portion of reality. Denotation is what happens when someone creates an information content entity E in order to specifically refer to something. The only relation between E and the thing is that E can be used to 'pick out' the thing. This relation connects those two together. Freedictionary.com sense 3: To signify directly; refer to specifically"@en ;
rdfs:domain obo:IAO_0000030 ;
rdfs:range obo:BFO_0000001 ;
rdfs:subPropertyOf obo:IAO_0000136 .
obo:IAO_0000136 a rdf:Property ;
rdfs:label "is about"@en ;
rdfs:comment "is_about is a (currently) primitive relation that relates an information artifact to an entity."@en ;
rdfs:domain obo:IAO_0000030 ;
rdfs:range .
obo:RO_0000058 a rdf:Property ;
rdfs:label "is concretized as"@en ;
rdfs:comment "A relationship between a generically dependent continuant and a specifically dependent continuant, in which the generically dependent continuant depends on some independent continuant in virtue of the fact that the specifically dependent continuant also depends on that same independent continuant. A generically dependent continuant may be concretized as multiple specifically dependent continuants."@en ;
rdfs:domain obo:BFO_0000031 ;
rdfs:range obo:BFO_0000020 .
obo:OBI_0000947 a rdfs:Class ;
rdfs:label "service provider role" ;
rdfs:comment "is a role which inheres in a person or organization and is realized in in a planned process which provides access to training, materials or execution of protocols for an organization or person" ;
rdfs:subClassOf obo:BFO_0000023 .
obo:BFO_0000017 a rdfs:Class ;
rdfs:label "realizable entity"@en ;
rdfs:comment "A specifically dependent continuant that inheres in continuant entities and are not exhibited in full at every time in which it inheres in an entity or group of entities. The exhibition or actualization of a realizable entity is a particular manifestation, functioning or process that occurs under certain circumstances."@en ;
rdfs:subClassOf obo:BFO_0000020 .
obo:IAO_8000014 a rdfs:Class ;
rdfs:label "generated ontology module" ;
rdfs:comment "An ontology module that is automatically generated, for example via a SPARQL query or via template and a CSV." ;
rdfs:subClassOf obo:IAO_8000000 .
obo:OBI_0200172 a rdfs:Class ;
rdfs:label "partitioning objective"@en ;
rdfs:comment "A partitioning objective is a data transformation objective where the aim is to generate a collection of disjoint non-empty subsets whose union equals a non-empty input set."@en ;
rdfs:subClassOf obo:OBI_0200166 .
obo:OBI_0000833 a rdf:Property ;
rdfs:label "objective_achieved_by" ;
rdfs:comment "This relation obtains between an objective specification and a planned process when the criteria specified in the objective specification are met at the end of the planned process." ;
rdfs:domain obo:IAO_0000005 ;
rdfs:range obo:OBI_0000011 .
obo:OBI_0000832 a rdfs:Class ;
rdfs:label "measurement device" ;
rdfs:comment "A device in which a measure function inheres." ;
rdfs:subClassOf obo:OBI_0000968 .
obo:OBI_0000312 a rdf:Property ;
rdfs:label "is_specified_output_of"@en ;
rdfs:comment "A relation between a planned process and a continuant participating in that process. The presence of the continuant at the end of the process is explicitly specified in the objective specification which the process realizes the concretization of."@en ;
rdfs:domain obo:BFO_0000002 ;
rdfs:range obo:OBI_0000011 ;
rdfs:subPropertyOf obo:RO_0000056 .
obo:OBI_0001933 a rdfs:Class ;
rdfs:label "value specification" ;
rdfs:comment "An information content entity that specifies a value within a classification scheme or on a quantitative scale." ;
rdfs:subClassOf obo:IAO_0000030 .
obo:OBI_0000663 a rdfs:Class ;
rdfs:label "class prediction data transformation"@en ;
rdfs:comment "A class prediction data transformation (sometimes called supervised classification) is a data transformation that has objective class prediction."@en ;
rdfs:subClassOf obo:OBI_0200000 .
obo:NCBITaxon_1338369 a rdfs:Class ;
rdfs:label "Dipnotetrapodomorpha" ;
rdfs:subClassOf obo:NCBITaxon_8287 .
obo:IAO_8000003 a rdfs:Class ;
rdfs:label "main release ontology module" ;
rdfs:comment "An ontology module that is intended to be the primary release product and the one consumed by the majority of tools." ;
rdfs:subClassOf obo:IAO_8000000 .
obo:OBI_0001573 a rdfs:Class ;
rdfs:label "DNA sequence data" ;
rdfs:comment "A sequence data item that is about the primary structure of DNA" ;
rdfs:subClassOf obo:OBI_0000973 .
obo:NCBITaxon_7711 a rdfs:Class ;
rdfs:label "Chordata" ;
rdfs:subClassOf obo:NCBITaxon_33511 .
a rdfs:Class ;
rdfs:label "Organism"@en-US ;
rdfs:comment "A particular organism or defined group of organisms considered to be taxonomically homogeneous."@en-US ;
rdfs:subClassOf obo:PCO_0000031 .
obo:OBI_0200042 a rdfs:Class ;
rdfs:label "hierarchical clustering"@en ;
rdfs:comment "A hierarchical clustering is a data transformation which achieves a class discovery objective, which takes as input data item and builds a hierarchy of clusters. The traditional representation of this hierarchy is a tree (visualized by a dendrogram), with the individual input objects at one end (leaves) and a single cluster containing every object at the other (root)."@en ;
rdfs:subClassOf obo:OBI_0200175 .
obo:NCBITaxon_131567 a rdfs:Class ;
rdfs:label "cellular organisms" .
a rdfs:Class ;
rdfs:subClassOf obo:BFO_0000006 .
obo:BCO_0000053 a rdfs:Class ;
rdfs:label "opportunistic search taxonomic inventory process"@en ;
rdfs:comment "A taxonomic inventory process that is a more casual reporting of occurrences of taxa of interest, still intended to be a comprehensive accounting of the taxa of interest, but with no pre-specified investment of effort nor planned trajectory for discovery, thus of often idiosyncratic length or spatial scope." ;
rdfs:subClassOf obo:BCO_0000047 .
obo:PATO_0002202 a rdfs:Class ;
rdfs:label "left handedness" ;
rdfs:comment "Handedness where the organism preferentially uses the left hand or foot for tasks requiring the use of a single hand or foot or a dominant hand or foot." ;
rdfs:subClassOf obo:PATO_0002201 .
obo:BFO_0000030 a rdfs:Class ;
rdfs:label "object"@en ;
rdfs:subClassOf obo:BFO_0000040 .
obo:NCBITaxon_314146 a rdfs:Class ;
rdfs:label "Euarchontoglires" ;
rdfs:subClassOf obo:NCBITaxon_1437010 .
obo:CL_0000842 a rdfs:Class ;
rdfs:label "mononuclear cell" ;
rdfs:comment "A leukocyte with a single non-segmented nucleus in the mature form." ;
rdfs:subClassOf obo:CL_0000000 .
obo:OBI_0000792 a rdfs:Class ;
rdfs:label "statistical model validation" ;
rdfs:comment "A data transformation which assesses how the results of a statistical analysis will generalize to an independent data set." ;
rdfs:subClassOf obo:OBI_0200171 .
obo:PCO_0000027 a rdfs:Class ;
rdfs:label "collection of humans"@en ;
rdfs:comment "A collection of organisms of the same species that has as members only humans." ;
rdfs:subClassOf obo:PCO_0000018 .
obo:RO_0002351 a rdf:Property ;
rdfs:label "has member"@en ;
rdfs:comment "has member is a mereological relation between a collection and an item." ;
rdfs:range obo:NCBITaxon_9606 , obo:CARO_0001010 , obo:OBI_0100051 ;
rdfs:subPropertyOf obo:BFO_0000051 .
obo:IAO_0000183 a rdfs:Class ;
rdfs:label "dendrogram"@en ;
rdfs:comment """A dendrogram is a report graph which is a tree diagram
frequently used to illustrate the arrangement of the clusters produced by a
clustering algorithm."""@en ;
rdfs:subClassOf obo:IAO_0000038 .
obo:BCO_0000003 a rdfs:Class ;
rdfs:label "observing process"@en ;
rdfs:comment "A process in which a person or machine sees or detects a material entity and selects it as worthy of observation, and which has as output an information content entity about the selected material entity." ;
rdfs:subClassOf obo:OBI_0000011 .
obo:OBI_0000457 a rdfs:Class ;
rdfs:label "manufacturing"@en ;
rdfs:comment "Manufacturing is a process with the intent to produce a processed material which will have a function for future use. A person or organization (having manufacturer role) is a participant in this process"@en ;
rdfs:subClassOf obo:OBI_0000094 .
obo:OBI_0666667 a rdfs:Class ;
rdfs:label "nucleic acid extraction"@en ;
rdfs:comment "a material separation to recover the nucleic acid fraction of an input material"@en ;
rdfs:subClassOf obo:OBI_0302884 .
obo:BCO_0000064 a rdfs:Class ;
rdfs:label "obsolete darwin core class"@en ;
rdfs:subClassOf .
obo:OBI_0000047 a rdfs:Class ;
rdfs:label "processed material"@en ;
rdfs:comment "Is a material entity that is created or changed during material processing."@en ;
rdfs:subClassOf obo:BFO_0000040 .
obo:OBI_0000835 a rdfs:Class ;
rdfs:label "manufacturer" ;
rdfs:comment "A person or organization that has a manufacturer role" ;
rdfs:subClassOf obo:BFO_0000040 .
obo:IAO_8000018 a rdfs:Class ;
rdfs:label "obo basic subset ontology module" ;
rdfs:comment """A subset ontology that is designed for basic applications to continue to make certain simplifying assumptions; many of these simplifying assumptions were based on the initial version of the Gene Ontology, and have become enshrined in many popular and useful tools such as term enrichment tools.
Examples of such assumptions include: traversing the ontology graph ignoring relationship types using a naive algorithm will not lead to cycles (i.e. the ontology is a DAG); every referenced term is declared in the ontology (i.e. there are no dangling clauses).
An ontology is OBO Basic if and only if it has the following characteristics:
DAG
Unidirectional
No Dangling Clauses
Fully Asserted
Fully Labeled
No equivalence axioms
Singly labeled edges
No qualifier lists
No disjointness axioms
No owl-axioms header
No imports""" ;
rdfs:seeAlso ;
rdfs:subClassOf obo:IAO_8000017 .
obo:OBI_0000023 a rdfs:Class ;
rdfs:label "classified data set"@en ;
rdfs:comment "A data set that is produced as the output of a class prediction data transformation and consists of a data set with assigned class labels."@en ;
rdfs:subClassOf obo:IAO_0000100 .
obo:bco_0000029 a rdfs:Class ;
rdfs:label "obsolete museum collection entity"@en ;
rdfs:comment "At the GSC14 hackathon in 09/2012, we decided to deprecate this term." ;
rdfs:subClassOf .
obo:BCO_0000031 a rdfs:Class ;
rdfs:label "museum collection"@en ;
rdfs:comment "An object aggregate that has as member part a material sample that is located in museum as a result of a process of curation."@en ;
rdfs:subClassOf obo:BFO_0000027 .
obo:BFO_0000051 a rdf:Property ;
rdfs:label "has part"@en ;
rdfs:comment "a core relation that holds between a whole and its part"@en ;
rdfs:range .
obo:BFO_0000006 a rdfs:Class ;
rdfs:label "spatial region"@en .
obo:bco_0000036 a rdfs:Class ;
rdfs:label "obsolete material sample"@en ;
rdfs:comment "A material entity that has a material sample role. A material entity takes on the material sample role by being the output of a material samping process. That is, is selected for study, collected, and submitted to an institution for preservation or study."@en ;
rdfs:subClassOf .
obo:IAO_8000000 a rdfs:Class ;
rdfs:label "ontology module" ;
rdfs:subClassOf obo:IAO_0000102 .
obo:OBI_0302884 a rdfs:Class ;
rdfs:label "extraction"@en ;
rdfs:comment "A material separation in which a desired component of an input material is separated from the remainder" ;
rdfs:subClassOf obo:OBI_0600014 .
obo:GO_0003964 a rdfs:Class ;
rdfs:label "RNA-directed DNA polymerase activity" ;
rdfs:comment "Catalysis of the reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1). Catalyzes RNA-template-directed extension of the 3'- end of a DNA strand by one deoxynucleotide at a time." ;
rdfs:subClassOf obo:GO_0003824 .
obo:bco_0000007 a rdfs:Class ;
rdfs:label "obsolete selecting process"@en ;
rdfs:comment "A process by which a person or machine decides that a particular material entity as worthy of collection or observation." ;
rdfs:subClassOf .
obo:IAO_8000010 a rdfs:Class ;
rdfs:label "exclusion subset ontology module" ;
rdfs:comment "A subset of an ontology that is intended to be excluded for some purpose. For example, a blacklist of classes." ;
rdfs:subClassOf obo:IAO_8000006 .
a rdfs:Class ;
rdfs:label "Machine Observation"@en-US ;
rdfs:comment "An output of a machine observation process."@en-US ;
rdfs:subClassOf obo:IAO_0000027 .
obo:PATO_0002203 a rdfs:Class ;
rdfs:label "right handedness" ;
rdfs:comment "Handedness where the organism preferentially uses the right hand or foot for tasks requiring the use of a single hand or foot or a dominant hand or foot." ;
rdfs:subClassOf obo:PATO_0002201 .
obo:OBI_0000968 a rdfs:Class ;
rdfs:label "device" ;
rdfs:comment "A material entity that is designed to perform a function in a scientific investigation, but is not a reagent." ;
rdfs:subClassOf obo:OBI_0000047 .
obo:NCBITaxon_8287 a rdfs:Class ;
rdfs:label "Sarcopterygii" ;
rdfs:subClassOf obo:NCBITaxon_117571 .
obo:OBI_0000453 a rdfs:Class ;
rdfs:label "measure function"@en ;
rdfs:comment "Measure function is a function that is borne by a processed material and realized in a process in which information about some entity is expressed relative to some reference."@en ;
rdfs:subClassOf obo:BFO_0000034 .
obo:bco_0000021 a rdfs:Class ;
rdfs:label "obsolete physical extraction process"@en ;
rdfs:comment "A process that involves removing a material entity from its original site to another site." ;
rdfs:subClassOf .
obo:OBI_0600036 a rdfs:Class ;
rdfs:label "establishing cell culture" ;
rdfs:comment "a process through which a new type of cell culture or cell line is created, either through the isolation and culture of one or more cells from a fresh source, or the deliberate experimental modification of an existing cell culture (e.g passaging a primary culture to become a secondary culture or line, or the immortalization or stable genetic modification of an existing culture or line)." ;
rdfs:subClassOf obo:OBI_0000094 .
a rdfs:Class ;
rdfs:label "Fossil Specimen"@en-US ;
rdfs:comment "A preserved specimen that is a fossil."@en-US ;
rdfs:subClassOf .
obo:BCO_0000025 a rdfs:Class ;
rdfs:label "locality description"@en ;
rdfs:comment "An information artifact that is about a spatio-temporal region at which a process (such as collecting process, observing process, or material sampling process) occured."@en ;
rdfs:subClassOf obo:IAO_0000030 .
obo:OBI_0000684 a rdfs:Class ;
rdfs:label "specimen collection objective" ;
rdfs:comment "A objective specification to obtain a material entity for potential use as an input during an investigation." ;
rdfs:subClassOf obo:IAO_0000005 .
obo:OBI_0001108 a rdfs:Class ;
rdfs:label "nucleic acid sequencer" ;
rdfs:comment "An device that is used to determine the order of nucleotides in nucleic acid sequences." ;
rdfs:subClassOf obo:OBI_0000832 .
a rdfs:Class ;
rdfs:subClassOf .
obo:bco_0000043 a rdfs:Class ;
rdfs:label "obsolete process that yields a material representation of a material entity"@en ;
rdfs:comment """Includes as output rubbings, casts, photographic prints, audio or video tapes.
Needs a better name. Current name is the definition."""@en ;
rdfs:subClassOf .
obo:NCBITaxon_33208 a rdfs:Class ;
rdfs:label "Metazoa" ;
rdfs:subClassOf obo:NCBITaxon_33154 .
obo:NCBITaxon_33511 a rdfs:Class ;
rdfs:label "Deuterostomia" ;
rdfs:subClassOf obo:NCBITaxon_33213 .
a rdfs:Class ;
rdfs:label "Event"@en-US ;
rdfs:comment "An action that occurs at some location during some time."@en-US ;
rdfs:subClassOf obo:BFO_0000015 .
obo:PATO_0001241 a rdfs:Class ;
rdfs:label "physical object quality" ;
rdfs:comment "A quality which inheres in a continuant." ;
rdfs:subClassOf obo:BFO_0000019 , obo:PATO_0000001 .
obo:IAO_0000178 a rdfs:Class ;
rdfs:label "material information bearer"@en ;
rdfs:comment "A material entity in which a concretization of an information content entity inheres."@en ;
rdfs:subClassOf obo:BFO_0000040 .
obo:bco_0000046 a rdfs:Class ;
rdfs:label "obsolete material target of observation role"@en ;
rdfs:comment "A role that is borne by some material entity and is realized by the material entity being the input of an observing process." ;
rdfs:subClassOf .
a rdfs:Class ;
rdfs:label "Taxon"@en-US ;
rdfs:comment "A group of organisms (sensu http://purl.obolibrary.org/obo/OBI_0100026) considered by taxonomists to form a homogeneous unit."@en-US ;
rdfs:subClassOf obo:PCO_0000000 .
obo:OBI_0000450 a rdfs:Class ;
rdfs:label "regulatory agency"@en ;
rdfs:comment "A regulatory agency is a organization that has responsibility over or for the legislation (acts and regulations) for a given sector of the government."@en ;
rdfs:subClassOf obo:OBI_0000245 .
obo:CL_0000010 a rdfs:Class ;
rdfs:label "cultured cell" ;
rdfs:comment "A cell in vitro that is or has been maintained or propagated as part of a cell culture." ;
rdfs:subClassOf obo:CL_0000578 .
obo:NCBITaxon_1437010 a rdfs:Class ;
rdfs:label "Boreoeutheria" ;
rdfs:subClassOf obo:NCBITaxon_9347 .
obo:IAO_8000007 a rdfs:Class ;
rdfs:label "curation subset ontology module" ;
rdfs:comment "A subset ontology that is intended as a whitelist for curators using the ontology. Such a subset will exclude classes that curators should not use for curation." ;
rdfs:subClassOf obo:IAO_8000006 .
obo:OBI_0002356 a rdfs:Class ;
rdfs:label "performance status value specification" ;
rdfs:comment "A categorical value specification that is an assessment of a participant's performance status (general well-being and activities of daily life)." ;
rdfs:subClassOf obo:OBI_0001930 .
obo:BFO_0000040 a rdfs:Class ;
rdfs:label "material entity"@en ;
rdfs:comment "An independent continuant that is spatially extended whose identity is independent of that of other entities and can be maintained through time."@en ;
rdfs:subClassOf obo:BFO_0000004 .
obo:NCBITaxon_32525 a rdfs:Class ;
rdfs:label "Theria " ;
rdfs:subClassOf obo:NCBITaxon_40674 .
obo:BFO_0000141 a rdfs:Class ;
rdfs:label "immaterial entity"@en ;
rdfs:subClassOf obo:BFO_0000004 .
obo:NCBITaxon_2157 a rdfs:Class ;
rdfs:label "Archaea" ;
rdfs:subClassOf obo:NCBITaxon_131567 , obo:OBI_0100026 .
obo:OBI_0200171 a rdfs:Class ;
rdfs:label "partitioning data transformation"@en ;
rdfs:comment "A partitioning data transformation is a data transformation that has objective partitioning."@en ;
rdfs:subClassOf obo:OBI_0200000 .
obo:bco_0000031 a rdfs:Class ;
rdfs:label "obsolete museum collection"@en ;
rdfs:comment "An object aggregate that has as member part a material sample that is located in museum as a result of a process of curation."@en ;
rdfs:subClassOf .
obo:IAO_0000308 a rdfs:Class ;
rdfs:label "figure"@en ;
rdfs:comment "An information content entity consisting of a two dimensional arrangement of information content entities such that the arrangement itself is about something."@en ;
rdfs:subClassOf obo:IAO_0000030 .
obo:OBI_0000070 a rdfs:Class ;
rdfs:label "assay"@en ;
rdfs:comment "A planned process with the objective to produce information about the material entity that is the evaluant, by physically examining it or its proxies."@en ;
rdfs:subClassOf obo:OBI_0000011 .
obo:BCO_0000047 a rdfs:Class ;
rdfs:label "taxonomic inventory process"@en ;
rdfs:comment "A planned process by which a taxonomic inventory is created."@en ;
rdfs:subClassOf obo:BCO_0000003 .
obo:OBI_0000973 a rdfs:Class ;
rdfs:label "sequence data"@en ;
rdfs:comment """A measurement datum that representing the primary structure of a macromolecule(it's sequence) sometimes associated with an indicator of confidence of that measurement.
""" .
obo:bco_0000045 a rdfs:Class ;
rdfs:label "obsolete process that yields an information artifact that is a representation of a material entity"@en ;
rdfs:comment """Includes audio recordings and photographs (which are information artifacts).
Needs a better name. Current name is the definition.""" ;
rdfs:subClassOf .
obo:bco_0000037 a rdfs:Class ;
rdfs:label "obsolete data sample"@en ;
rdfs:comment "An information content entity (?) that is the result of some data sampling process."@en ;
rdfs:subClassOf .
obo:BFO_0000005 a rdfs:Class ;
rdfs:label "obsolete dependent continuant"@en ;
rdfs:comment "A continuant that is either dependent on one or other independent continuant bearers or inheres in or is borne by other entities."@en ;
rdfs:subClassOf .
obo:OBI_0000747 a rdfs:Class ;
rdfs:label "material sample" ;
rdfs:comment "A material entity that has the material sample role" ;
rdfs:subClassOf obo:BFO_0000040 , obo:OBI_0100051 , .
obo:bco_0000034 a rdfs:Class ;
rdfs:label "obsolete organismal entity"@en ;
rdfs:comment "A material entity that derives from an organism or virus or viroid."@en ;
rdfs:subClassOf obo:bco_0000042 .
a rdfs:Class ;
rdfs:label "Occurrence"@en-US ;
rdfs:comment "An existence of an Organism (sensu http://rs.tdwg.org/dwc/terms/Organism) at a particular place at a particular time."@en-US .
obo:CL_0000000 a rdfs:Class ;
rdfs:label "cell" ;
rdfs:comment "A material entity of anatomical origin (part of or deriving from an organism) that has as its parts a maximally connected cell compartment surrounded by a plasma membrane." ;
rdfs:subClassOf obo:BFO_0000040 .
obo:BFO_0000027 a rdfs:Class ;
rdfs:label "object aggregate"@en ;
rdfs:subClassOf obo:BFO_0000040 .
obo:IAO_0000100 a rdfs:Class ;
rdfs:label "data set"@en ;
rdfs:comment "A data item that is an aggregate of other data items of the same type that have something in common. Averages and distributions can be determined for data sets."@en ;
rdfs:subClassOf obo:IAO_0000027 .
obo:IAO_8000002 a rdfs:Class ;
rdfs:label "editors ontology module" ;
rdfs:comment "An ontology module that is intended to be directly edited, typically managed in source control, and typically not intended for direct consumption by end-users." ;
rdfs:subClassOf obo:IAO_8000000 .
obo:IAO_8000017 a rdfs:Class ;
rdfs:label "ontology module subsetted by expressivity" ;
rdfs:subClassOf obo:IAO_8000006 .
obo:BCO_0000054 a rdfs:Class ;
rdfs:label "trap or sample taxonomic inventory process"@en ;
rdfs:comment "A taxonomic inventory process that is typically restricted in geospatial extent that involves either the physical extraction of some evidence of the presence of the taxa of interest, such as a whole organisms, scat, fur, other material samples or information artifacts such as photographs or sound recordings"@en ;
rdfs:subClassOf obo:BCO_0000047 .
obo:BFO_0000023 a rdfs:Class ;
rdfs:label "role"@en ;
rdfs:comment "A realizable entity the manifestation of which brings about some result or end that is not essential to a continuant in virtue of the kind of thing that it is but that can be served or participated in by that kind of continuant in some kinds of natural, social or institutional contexts."@en ;
rdfs:subClassOf obo:BFO_0000017 .
obo:OBI_0100010 a rdfs:Class ;
rdfs:label "Epstein Barr virus transformed B cell"@en ;
rdfs:comment "A material entity which results from viral transformation process using EBV as transformation agent when applied to B-cell entity"@en ;
rdfs:subClassOf obo:OBI_0000047 .
obo:BCO_0000065 a rdfs:Class ;
rdfs:label "human observation process"@en ;
rdfs:comment "An observing process in which the observing entity consists of one or more humans."@en ;
rdfs:subClassOf obo:BCO_0000003 .
a rdfs:Class ;
rdfs:label "Geological Context"@en-US ;
rdfs:comment "Geological information, such as stratigraphy, that qualifies a region or place."@en-US .
obo:IAO_0000309 a rdfs:Class ;
rdfs:label "diagram"@en ;
rdfs:comment "A figure that expresses one or more propositions"@en ;
rdfs:subClassOf obo:IAO_0000308 .
obo:bco_0000032 a rdfs:Class ;
rdfs:label "obsolete organismal museum collection"@en ;
rdfs:comment "A museum collection that has as member part a material sample that was derived from an organism."@en ;
rdfs:subClassOf .
obo:OBI_0000838 a rdfs:Class ;
rdfs:label "material maintenance" ;
rdfs:comment "a process with that achieves the objective to maintain some or all of the characteristics of an input material over time" ;
rdfs:subClassOf obo:OBI_0000011 .
obo:PCO_0000024 a rdfs:Class ;
rdfs:label "household"@en ;
rdfs:comment "An organismal entity that consists of one or more people who live in the same dwelling and also share at meals or living accommodation, and may consist of a single family or some other grouping of people." ;
rdfs:subClassOf obo:PCO_0000031 .
obo:RO_0002321 a rdf:Property ;
rdfs:range .
obo:GO_0003674 a rdfs:Class ;
rdfs:label "GO:molecular_function" ;
rdfs:comment "A molecular process that can be carried out by the action of a single macromolecular machine, usually via direct physical interactions with other molecular entities. Function in this sense denotes an action, or activity, that a gene product (or a complex) performs. These actions are described from two distinct but related perspectives: (1) biochemical activity, and (2) role as a component in a larger system/process." ;
rdfs:subClassOf obo:BFO_0000015 , .
obo:OBI_0000427 a rdfs:Class ;
rdfs:label "enzyme"@en ;
rdfs:comment """(protein or rna) or has_part (protein or rna) and
has_function some GO:0003824 (catalytic activity)"""@en ;
rdfs:subClassOf obo:BFO_0000040 .
obo:OBI_0600014 a rdfs:Class ;
rdfs:label "material component separation"@en ;
rdfs:comment "a material processing in which components of an input material become segregated in space"@en ;
rdfs:subClassOf obo:OBI_0000094 .
obo:IAO_8000013 a rdfs:Class ;
rdfs:label "reasoned ontology module" ;
rdfs:comment "An ontology module that contains axioms generated by a reasoner. The generated axioms are typically direct SubClassOf axioms, but other possibilities are available." ;
rdfs:seeAlso ;
rdfs:subClassOf obo:IAO_8000000 .
obo:IAO_0000180 a rdfs:Class ;
rdfs:label "heatmap"@en ;
rdfs:comment """A heatmap is a report graph which is a graphical representation of data
where the values taken by a variable(s) are shown as colors in a
two-dimensional map."""@en ;
rdfs:subClassOf obo:IAO_0000038 .
a rdfs:Class ;
rdfs:label "archeobotanical specimen"@en ;
rdfs:comment "A preserved specimen that is the output of an archaeological sampling process and is the remains of a part of some plant." ;
rdfs:subClassOf .
obo:BFO_0000016 a rdfs:Class ;
rdfs:label "disposition"@en ;
rdfs:subClassOf obo:BFO_0000017 .
obo:bco_0000004 a rdfs:Class ;
rdfs:label "obsolete being there process"@en ;
rdfs:comment "A process of existing in a particular spatio-temporal region."@en ;
rdfs:subClassOf .
obo:OBI_0000704 a rdfs:Class ;
rdfs:label "decision tree induction objective" ;
rdfs:comment "A decision tree induction objective is a data transformation objective in which a tree-like graph of edges and nodes is created and from which the selection of each branch requires that some type of logical decision is made." ;
rdfs:subClassOf obo:OBI_0200166 .
obo:IAO_0000030 a rdfs:Class ;
rdfs:label "information content entity"@en ;
rdfs:comment "A generically dependent continuant that is about some thing."@en ;
rdfs:subClassOf obo:BFO_0000031 .
obo:bco_0000026 a rdfs:Class ;
rdfs:label "obsolete material sample role"@en ;
rdfs:comment "A role that is borne by some material entity and is realized by the material entity being the output of a material sampling process."@en ;
rdfs:subClassOf .
a rdfs:Class ;
rdfs:label "Resource Relationship"@en-US ;
rdfs:comment "A relationship of one rdfs:Resource (http://www.w3.org/2000/01/rdf-schema#Resource) to another."@en-US ;
rdfs:subClassOf .
obo:OBI_0000419 a rdfs:Class ;
rdfs:label "reverse transcriptase"@en ;
rdfs:comment """enzyme and has_function some GO:0003964 (RNA-directed DNA polymerase
activity)"""@en ;
rdfs:subClassOf obo:OBI_0000427 .
obo:PATO_0001995 a rdfs:Class ;
rdfs:label "organismal quality" ;
rdfs:comment "A quality that inheres in an entire organism or part of an organism." ;
rdfs:subClassOf obo:PATO_0001241 .
obo:NCBITaxon_7742 a rdfs:Class ;
rdfs:label "Vertebrata " ;
rdfs:subClassOf obo:NCBITaxon_89593 .
obo:NCBITaxon_207598 a rdfs:Class ;
rdfs:label "Homininae" ;
rdfs:subClassOf obo:NCBITaxon_9604 .
obo:BCO_0000061 a rdfs:Class ;
rdfs:label "obsolete fossil specimen"@en ;
rdfs:comment "A specimen that is derived from a fossil."@en ;
rdfs:subClassOf .
obo:IAO_8000006 a rdfs:Class ;
rdfs:label "subset ontology module" ;
rdfs:comment "An ontology module that is extracted from a main ontology module and includes only a subset of entities or axioms." ;
rdfs:seeAlso , ;
rdfs:subClassOf obo:IAO_8000000 .
obo:OBI_0000272 a rdfs:Class ;
rdfs:label "protocol"@en ;
rdfs:comment "A plan specification which has sufficient level of detail and quantitative information to communicate it between investigation agents, so that different investigation agents will reliably be able to independently reproduce the process."@en ;
rdfs:subClassOf obo:IAO_0000104 .
obo:UBERON_0000477 a rdfs:Class ;
rdfs:label "anatomical cluster" ;
rdfs:comment "Anatomical group that has its parts adjacent to one another." ;
rdfs:subClassOf obo:BFO_0000040 .
obo:OBI_0000740 a rdfs:Class ;
rdfs:label "material sample role" ;
rdfs:comment "A material sample role is a specimen role borne by a material entity that is the output of a material sampling process." ;
rdfs:subClassOf obo:OBI_0000112 .
obo:OBI_0001912 a rdfs:Class ;
rdfs:label "cell freezing medium"@en ;
rdfs:comment "A processed material that serves as a liquid vehicle for freezing cells for long term quiescent stroage, which contains chemicls needed to sustain cell viability across freeze-thaw cycles. " ;
rdfs:subClassOf obo:OBI_0000047 .
obo:OBI_0000458 a rdfs:Class ;
rdfs:label "manufacturing objective"@en ;
rdfs:comment "is the objective to manufacture a material of a certain function (device)"@en ;
rdfs:subClassOf obo:OBI_0000456 .
obo:NCBITaxon_9443 a rdfs:Class ;
rdfs:label "Primates" ;
rdfs:subClassOf obo:NCBITaxon_314146 .
obo:BFO_0000001 a rdfs:Class ;
rdfs:label "entity"@en .
obo:PCO_0000031 a rdfs:Class ;
rdfs:label "organismal entity"@en ;
rdfs:comment "A material entity that is one or more organisms, viruses or viroids." ;
rdfs:subClassOf obo:BFO_0000040 .
obo:GO_0003824 a rdfs:Class ;
rdfs:label "catalytic activity" ;
rdfs:comment "Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic." ;
rdfs:subClassOf obo:GO_0003674 .
obo:OBI_0000017 a rdfs:Class ;
rdfs:label "regulatory role"@en ;
rdfs:comment "a role which inheres in material entities and is realized in the processes of making, enforcing or being defined by legislation or orders issued by a governmental body."@en ;
rdfs:subClassOf obo:BFO_0000023 .
obo:NCBITaxon_9606 a rdfs:Class ;
rdfs:label "Homo sapiens" ;
rdfs:subClassOf obo:NCBITaxon_9605 .
obo:IAO_0000184 a rdfs:Class ;
rdfs:label "scatter plot"@en ;
rdfs:comment "A scatterplot is a graph which uses Cartesian coordinates to display values for two variables for a set of data. The data is displayed as a collection of points, each having the value of one variable determining the position on the horizontal axis and the value of the other variable determining the position on the vertical axis."@en ;
rdfs:subClassOf obo:IAO_0000038 .
obo:bco_0000044 a rdfs:Class ;
rdfs:label "obsolete material target of observation"@en ;
rdfs:comment "A material entity that has a target of observation role, that is, a material entity that is the input of some observing process."@en ;
rdfs:subClassOf .
obo:OBI_0000845 a rdfs:Class ;
rdfs:label "primary structure of RNA molecule" ;
rdfs:comment "The primary structure of an RNA molecule that is completely defined by the set of its nucleic residue parts and the linear order induced by the peptide bonds that hold them together" ;
rdfs:subClassOf obo:SO_0000001 .
obo:IAO_8000011 a rdfs:Class ;
rdfs:label "external import ontology module" ;
rdfs:comment "An imported ontology module that is derived from an external ontology. Derivation methods include the OWLAPI SLME approach." ;
rdfs:subClassOf obo:IAO_8000005 .
obo:BCO_0000044 a rdfs:Class ;
rdfs:label "material target of observation"@en ;
rdfs:comment "A material entity that has a target of observation role, that is, a material entity that is the input of some observing process."@en ;
rdfs:subClassOf obo:BFO_0000040 .
obo:BFO_0000087 a rdf:Property ;
rdfs:range .
obo:IAO_0000007 a rdfs:Class ;
rdfs:label "action specification"@en ;
rdfs:comment "a directive information entity that describes an action the bearer will take"@en ;
rdfs:subClassOf obo:IAO_0000033 .
obo:OBI_0000744 a rdfs:Class ;
rdfs:label "material sampling process" ;
rdfs:comment "A specimen gathering process with the objective to obtain a specimen that is representative of the input material entity" ;
rdfs:subClassOf obo:OBI_0000659 .
a rdfs:Class ;
rdfs:label "Material Sample"@en-US ;
rdfs:comment "A physical results of a sampling (or subsampling) event. In biological collections, the material sample is typically collected, and either preserved or destructively processed."@en-US .
a rdfs:Class ;
rdfs:subClassOf obo:IAO_0000102 .
obo:OBI_0001479 a rdfs:Class ;
rdfs:label "specimen from organism"@en ;
rdfs:comment "A specimen that derives from an anatomical part or substance arising from an organism. Examples of tissue specimen include tissue, organ, physiological system, blood, or body location (arm)." ;
rdfs:subClassOf obo:OBI_0100051 , .
obo:BFO_0000004 a rdfs:Class ;
rdfs:label "independent continuant"@en ;
rdfs:comment "b is an independent continuant = Def. b is a continuant which is such that there is no c and no t such that b s-depends_on c at t. (axiom label in BFO2 Reference: [017-002])"@en ;
rdfs:subClassOf obo:BFO_0000002 .
obo:BCO_0000059 a rdfs:Class ;
rdfs:label "museum"@en ;
rdfs:comment "An institution that cares for (conserves) a collection of artifacts and other objects of scientific, artistic, cultural, or historical importance." ;
rdfs:subClassOf obo:OBI_0000245 .
obo:OBI_0000423 a rdfs:Class ;
rdfs:label "extract"@en ;
rdfs:comment "an extract is a material entity which results from an extraction process"@en ;
rdfs:subClassOf obo:OBI_0000047 .
obo:BFO_0000015 a rdfs:Class ;
rdfs:label "process"@en ;
rdfs:comment "p is a process = Def. p is an occurrent that has temporal proper parts and for some time t, p s-depends_on some material entity at t. (axiom label in BFO2 Reference: [083-003])"@en .
obo:NCBITaxon_33154 a rdfs:Class ;
rdfs:label "Opisthokonta" ;
rdfs:subClassOf obo:NCBITaxon_2759 .
obo:OBI_0200188 a rdfs:Class ;
rdfs:label "cross validation objective"@en ;
rdfs:comment "A cross validation objective is a data transformation objective in which the aim is to partition a sample of data into subsets such that the analysis is initially performed on a single subset, while the other subset(s) are retained for subsequent use in confirming and validating the initial analysis."@en ;
rdfs:subClassOf obo:OBI_0200172 .
obo:OBI_0200166 a rdfs:Class ;
rdfs:label "data transformation objective"@en ;
rdfs:comment "An objective specification to transformation input data into output data"@en ;
rdfs:subClassOf obo:IAO_0000005 .
obo:NCBITaxon_314295 a rdfs:Class ;
rdfs:label "Hominoidea" ;
rdfs:subClassOf obo:NCBITaxon_9526 .
obo:OBI_0000079 a rdfs:Class ;
rdfs:label "culture medium"@en ;
rdfs:comment "a processed material that provides the needed nourishment for microorganisms or cells grown in vitro." ;
rdfs:subClassOf obo:OBI_0000047 .
obo:NCBITaxon_7776 a rdfs:Class ;
rdfs:label "Gnathostomata " ;
rdfs:subClassOf obo:NCBITaxon_7742 .
obo:OBI_0001930 a rdfs:Class ;
rdfs:label "categorical value specification" ;
rdfs:comment "A value specification that is specifies one category out of a fixed number of nominal categories" ;
rdfs:subClassOf obo:OBI_0001933 .
obo:CHEBI_23367 a rdfs:Class ;
rdfs:label "molecular entity" ;
rdfs:comment "Any constitutionally or isotopically distinct atom, molecule, ion, ion pair, radical, radical ion, complex, conformer etc., identifiable as a separately distinguishable entity." ;
rdfs:subClassOf obo:BFO_0000040 .
obo:bco_0000030 a rdfs:Class ;
rdfs:label "obsolete organismal museum collection entity"@en ;
rdfs:comment "A museum collections entity that derives from an organismal entity, has a persistent evidence role and 'depends on' a process of collecting."@en ;
rdfs:subClassOf obo:bco_0000029 .
obo:IAO_0000104 a rdfs:Class ;
rdfs:label "plan specification"@en ;
rdfs:comment "A directive information entity with action specifications and objective specifications as parts that, when concretized, is realized in a process in which the bearer tries to achieve the objectives by taking the actions specified."@en ;
rdfs:subClassOf obo:IAO_0000033 .
obo:OBI_0600024 a rdfs:Class ;
rdfs:label "maintaining cell culture"@en ;
rdfs:comment "a protocol application in which cells are kept alive in a defined environment outside of an organism. part of cell_culturing"@en ;
rdfs:subClassOf obo:OBI_0000838 .
a rdfs:Class ;
rdfs:subClassOf obo:IAO_0000102 .
a rdfs:Class ;
rdfs:subClassOf obo:IAO_0000102 .
obo:bco_0000038 a rdfs:Class ;
rdfs:label "obsolete statistical sample"@en ;
rdfs:comment "This term has been deprecated until it is determined whether or not it is needed in the BCO. Should probably be replaced by a term from OBI or IAO." ;
rdfs:subClassOf .
obo:OBI_0000011 a rdfs:Class ;
rdfs:label "planned process"@en ;
rdfs:comment "A processual entity that realizes a plan which is the concretization of a plan specification."@en ;
rdfs:subClassOf obo:BFO_0000015 , .
obo:BCO_0000062 a rdfs:Class ;
rdfs:label "obsolete living specimen"@en ;
rdfs:comment "A specimen that is alive."@en ;
rdfs:subClassOf .
obo:IAO_0000033 a rdfs:Class ;
rdfs:label "directive information entity"@en ;
rdfs:comment "An information content entity whose concretizations indicate to their bearer how to realize them in a process."@en ;
rdfs:subClassOf obo:IAO_0000030 .
obo:BFO_0000002 a rdfs:Class ;
rdfs:label "continuant"@en ;
rdfs:comment "An entity that exists in full at any time in which it exists at all, persists through time while maintaining its identity and has no temporal parts."@en ;
rdfs:subClassOf obo:BFO_0000001 .
obo:bco_0000027 a rdfs:Class ;
rdfs:label "obsolete successful material sampling process"@en ;
rdfs:comment "A sampling process that has as output some material sample."@en ;
rdfs:subClassOf .
obo:OBI_0000953 a rdfs:Class ;
rdfs:label "processed specimen" ;
rdfs:comment "A specimen that has been intentionally physically modified." ;
rdfs:subClassOf obo:OBI_0000047 , obo:OBI_0100051 , .
obo:OBI_0000700 a rdfs:Class ;
rdfs:label "support vector machine" ;
rdfs:comment "A support vector machine is a data transformation with a class prediction objective based on the construction of a separating hyperplane that maximizes the margin between two data sets of vectors in n-dimensional space." ;
rdfs:subClassOf obo:OBI_0000663 .
obo:CL_0000236 a rdfs:Class ;
rdfs:label "B cell" ;
rdfs:comment "A lymphocyte of B lineage with the phenotype CD19-positive, CD20-positive, and capable of B cell mediated immunity." ;
rdfs:subClassOf obo:CL_0000542 .
obo:IAO_0000064 a rdfs:Class ;
rdfs:label "algorithm"@en ;
rdfs:comment "A plan specification which describes the inputs and output of mathematical functions as well as workflow of execution for achieving an predefined objective. Algorithms are realized usually by means of implementation as computer programs for execution by automata."@en ;
rdfs:subClassOf obo:IAO_0000104 .
obo:BCO_0000051 a rdfs:Class ;
rdfs:label "restricted search taxonomic inventory process"@en ;
rdfs:comment "A taxonomic inventory process that is restricted to plots, transects, or points, in which a person or group of people is comprehensively covering the entire area, usually with a well-described survey time or pace. The search is restricted to a defined and human-scale geospatial area (usually traversable within a time course of less than a day) within which there is an expectation of a comprehensive accounting of the taxonomic items of interest." ;
rdfs:subClassOf obo:BCO_0000047 .
obo:bco_0000042 a rdfs:Class ;
rdfs:label "obsolete taxonomic identification process"@en ;
rdfs:comment "A process by which a material sample is associated with a taxon or taxa." ;
rdfs:subClassOf .
obo:bco_0000035 a rdfs:Class ;
rdfs:label "obsolete organism or virus or viroid"@en ;
rdfs:comment """This terms was replaced by a term imported from CARO.
The original diagram only had organsim, but DWC and GOs both need to include viruses and viroids."""@en ;
rdfs:subClassOf .
obo:BCO_0000084 a rdfs:Class ;
rdfs:label "identification assertion"@en ;
rdfs:comment "A data item that is the output of a taxonomic identification process and associates some organismal entity with a taxon or taxa." ;
rdfs:subClassOf obo:IAO_0000027 .
obo:BCO_0000085 a rdf:Property ;
rdfs:label "to taxon"@en ;
rdfs:comment "This relation is used specifically to link a taxonomic association to a taxon and is used with the of organism relation." ;
rdfs:domain obo:BCO_0000084 ;
rdfs:range ;
rdfs:subPropertyOf obo:IAO_0000136 .
obo:BCO_0000086 a rdf:Property ;
rdfs:label "of organism"@en ;
rdfs:comment "This relation specifically links an identification association to an organismal entity and is used together with the to taxon relation." ;
rdfs:domain obo:BCO_0000084 ;
rdfs:range obo:PCO_0000031 ;
rdfs:subPropertyOf obo:IAO_0000136 .
obo:bco_0000001 a rdfs:Class ;
rdfs:label "obsolete persistent evidence role"@en ;
rdfs:comment "An evidence role that persists through time." ;
rdfs:subClassOf .
obo:IAO_0000015 a rdfs:Class ;
rdfs:label "information carrier"@en ;
rdfs:comment "A quality of an information bearer that imparts the information content"@en ;
rdfs:subClassOf obo:BFO_0000019 .
obo:BCO_0000016 a rdfs:Class ;
rdfs:label "submitting process"@en ;
rdfs:comment "A planned process whereby a person submits a material sample to an organization." ;
rdfs:subClassOf obo:OBI_0000011 .
obo:OBI_0100026 a rdfs:Class ;
rdfs:label "organism"@en ;
rdfs:comment "A material entity that is an individual living system, such as animal, plant, bacteria or virus, that is capable of replicating or reproducing, growth and maintenance in the right environment. An organism may be unicellular or made up, like humans, of many billions of cells divided into specialized tissues and organs."@en ;
rdfs:subClassOf obo:BFO_0000040 .
obo:OBI_0000441 a rdfs:Class ;
rdfs:label "assay objective"@en ;
rdfs:comment "an objective specification to determine a specified type of information about an evaluated entity (the material entity bearing evaluant role)"@en ;
rdfs:subClassOf obo:IAO_0000005 .
obo:BCO_0000066 a rdfs:Class ;
rdfs:label "machine observation process"@en ;
rdfs:comment "An observing process in which the observing entity consists of one or more machines."@en ;
rdfs:subClassOf obo:BCO_0000003 .
obo:IAO_0000186 a rdfs:Class ;
rdfs:label "photographic print"@en ;
rdfs:comment "A photographic print is a material entity upon which a photograph generically depends."@en ;
rdfs:subClassOf obo:BFO_0000040 , obo:IAO_0000178 .
obo:BCO_0000048 a rdfs:Class ;
rdfs:label "taxonomic inventory"@en ;
rdfs:comment "A list of names ascribed to biological entities of specified organismal scope recorded over some defined spatial and temporal scope following a described sampling protocol and sampling effort, potentially including values indicating abundance or biomass of the biological entities"@en ;
rdfs:subClassOf obo:IAO_0000030 .
obo:OBI_0000671 a rdfs:Class ;
rdfs:label "sample from organism" ;
rdfs:comment "a material obtained from an organism in order to be a representative of the whole" ;
rdfs:subClassOf obo:OBI_0000747 , obo:OBI_0001479 .
obo:IAO_0000101 a rdfs:Class ;
rdfs:label "image"@en ;
rdfs:comment "An image is an affine projection to a two dimensional surface, of measurements of some quality of an entity or entities repeated at regular intervals across a spatial range, where the measurements are represented as color and luminosity on the projected on surface."@en ;
rdfs:subClassOf obo:IAO_0000308 .
obo:CL_0000578 a rdfs:Class ;
rdfs:label "experimentally modified cell in vitro" ;
rdfs:comment "A cell in vitro that has undergone physical changes as a consequence of a deliberate and specific experimental procedure." ;
rdfs:subClassOf obo:CL_0000000 , obo:OBI_0000047 .
obo:bco_0000024 a rdfs:Class ;
rdfs:label "obsolete statistical sampling process"@en ;
rdfs:comment "This term has been deprecated until it is determined whether or not it is needed in the BCO. Should probably be replaced by a term from OBI or IAO." ;
rdfs:subClassOf .
obo:PR_000000001 a rdfs:Class ;
rdfs:label "protein" ;
rdfs:comment "An amino acid chain that is produced de novo by ribosome-mediated translation of a genetically-encoded mRNA." ;
rdfs:subClassOf obo:CHEBI_16670 .
obo:IAO_0000037 a rdfs:Class ;
rdfs:label "dot plot"@en ;
rdfs:comment "A dot plot is a report graph which is a graphical representation of data where each data point is represented by a single dot placed on coordinates corresponding to data point values in particular dimensions."@en ;
rdfs:subClassOf obo:IAO_0000038 .
obo:OBI_0000185 a rdfs:Class ;
rdfs:label "imaging assay" ;
rdfs:comment "An assay that produces a picture of an entity." ;
rdfs:subClassOf obo:OBI_0000070 .
obo:OBI_0000571 a rdfs:Class ;
rdfs:label "manufacturer role" ;
rdfs:comment "Manufacturer role is a role which inheres in a person or organization and which is realized by a manufacturing process." ;
rdfs:subClassOf obo:BFO_0000023 .
obo:OBI_0000014 a rdfs:Class ;
rdfs:label "regulator role"@en ;
rdfs:comment "a regulatory role involved with making and/or enforcing relevant legislation and governmental orders"@en ;
rdfs:subClassOf obo:OBI_0000017 .
obo:CHEBI_16670 a rdfs:Class ;
rdfs:label "peptide" ;
rdfs:comment "Amide derived from two or more amino carboxylic acid molecules (the same or different) by formation of a covalent bond from the carbonyl carbon of one to the nitrogen atom of another with formal loss of water. The term is usually applied to structures formed from alpha-amino acids, but it includes those derived from any amino carboxylic acid. X = OH, OR, NH2, NHR, etc." ;
rdfs:subClassOf obo:CHEBI_33839 .
obo:OBI_0200111 a rdfs:Class ;
rdfs:label "data visualization"@en ;
rdfs:comment "An planned process that creates images, diagrams or animations from the input data."@en ;
rdfs:subClassOf obo:OBI_0000011 .
obo:BCO_0000055 a rdfs:Class ;
rdfs:label "adventitious taxonomic inventory process"@en ;
rdfs:comment "A taxonomic inventory process in which taxon occurrences are recorded as co-variates of another study, or by happenstance, and later compiled as a taxonomic inventory." ;
rdfs:subClassOf obo:BCO_0000047 .
obo:PATO_0002204 a rdfs:Class ;
rdfs:label "ambidextrous handedness" ;
rdfs:comment "Handedness where the organism exhibits no overall dominance in the use of right or left hand or foot in the performance of tasks that require one hand or foot or a dominant hand or foot." ;
rdfs:subClassOf obo:PATO_0002201 .
a rdfs:Class ;
rdfs:label "zooarcheological specimen"@en ;
rdfs:comment "A preserved specimen that is the output of an archaeological sampling process and is the remains of a part of some animal." ;
rdfs:subClassOf .
obo:BFO_0000019 a rdfs:Class ;
rdfs:label "quality"@en ;
rdfs:subClassOf obo:BFO_0000020 .
a rdfs:Class ;
rdfs:label "Human Observation"@en-US ;
rdfs:comment "An output of a human observation process."@en-US ;
rdfs:subClassOf obo:IAO_0000027 .
obo:NCBITaxon_32523 a rdfs:Class ;
rdfs:label "Tetrapoda" ;
rdfs:subClassOf obo:NCBITaxon_1338369 .
a rdfs:Class ;
rdfs:label "Obsolete Class" .
obo:CL_0000542 a rdfs:Class ;
rdfs:label "lymphocyte" ;
rdfs:comment "A lymphocyte is a leukocyte commonly found in the blood and lymph that has the characteristics of a large nucleus, a neutral staining cytoplasm, and prominent heterochromatin." ;
rdfs:subClassOf obo:CL_0000842 .
obo:OBI_0000707 a rdfs:Class ;
rdfs:label "decision tree building data transformation"@en ;
rdfs:comment "A decision tree building data transformation is a data transformation that has objective decision tree induction."@en ;
rdfs:subClassOf obo:OBI_0200000 .
obo:IAO_8000016 a rdfs:Class ;
rdfs:label "taxonomic bridge ontology module" ;
rdfs:subClassOf obo:IAO_8000004 .
obo:OBI_0000018 a rdfs:Class ;
rdfs:label "material supplier role"@en ;
rdfs:comment "a role realized through the process of supplying materials such as animal subjects, reagents or other materials used in an investigation."@en ;
rdfs:subClassOf obo:OBI_0000947 .
obo:NCBITaxon_9526 a rdfs:Class ;
rdfs:label "Catarrhini" ;
rdfs:subClassOf obo:NCBITaxon_314293 .
obo:bco_0000005 a rdfs:Class ;
rdfs:label "obsolete printed report"@en ;
rdfs:comment "IAO has the term document, which is defined as \"A collection of information content entities intended to be understood together as a whole\" and has as examples journal article, patent application, laboratory notebook, and book. IAO also has a term for report, but it is not defined. With this term, we want to describe the physical object that corresponds to some information content entity, together with the information content contained in the document or report. This class may be less important for modeling collection data, but could be important for efforts to get hand written (specifically dependent) reports into an electronic (generically dependent) report, and monitoring that process." ;
rdfs:subClassOf .
obo:BFO_0000020 a rdfs:Class ;
rdfs:label "specifically dependent continuant"@en ;
rdfs:comment "A continuant that inheres in or is borne by other entities. Every instance of A requires some specific instance of B which must always be the same."@en ;
rdfs:subClassOf obo:BFO_0000002 .
obo:bco_0000003 a rdfs:Class ;
rdfs:label "obsolete observing process"@en ;
rdfs:comment "A process in which a person or machine sees or detects a material entity and selects it as worthy of observation, and which has as output an information content entity about the selected material entity." ;
rdfs:subClassOf .
obo:bco_0000023 a rdfs:Class ;
rdfs:label "obsolete data sampling process"@en ;
rdfs:comment "This term has been deprecated until it is determined whether or not it is needed in the BCO. Should probably be replaced by a term from OBI or IAO." ;
rdfs:subClassOf .
obo:NCBITaxon_2759 a rdfs:Class ;
rdfs:label "Eukaryota" ;
rdfs:subClassOf obo:NCBITaxon_131567 , obo:OBI_0100026 .
obo:NCBITaxon_9605 a rdfs:Class ;
rdfs:label "Homo" ;
rdfs:subClassOf obo:NCBITaxon_207598 .
obo:CHEBI_33696 a rdfs:Class ;
rdfs:label "nucleic acid" ;
rdfs:comment "A macromolecule made up of nucleotide units and hydrolysable into certain pyrimidine or purine bases (usually adenine, cytosine, guanine, thymine, uracil), D-ribose or 2-deoxy-D-ribose and phosphoric acid." ;
rdfs:subClassOf obo:CHEBI_33839 .
obo:IAO_8000001 a rdfs:Class ;
rdfs:label "base ontology module" ;
rdfs:comment "An ontology module that comprises only of asserted axioms local to the ontology, excludes import directives, and excludes axioms or declarations from external ontologies." ;
rdfs:seeAlso ;
rdfs:subClassOf obo:IAO_8000000 .
obo:CHEBI_33839 a rdfs:Class ;
rdfs:label "macromolecule" ;
rdfs:comment "A macromolecule is a molecule of high relative molecular mass, the structure of which essentially comprises the multiple repetition of units derived, actually or conceptually, from molecules of low relative molecular mass." ;
rdfs:subClassOf obo:CHEBI_23367 .
obo:IAO_0000185 a rdfs:Class ;
rdfs:label "photograph"@en ;
rdfs:comment "A photograph is created by projecting an image onto a photosensitive surface such as a chemically treated plate or film, CCD receptor, etc."@en ;
rdfs:subClassOf obo:IAO_0000101 .
obo:PCO_0000017 a rdfs:Class ;
rdfs:label "species as a collection of organisms"@en ;
rdfs:comment "A collection of organisms that has as parts every organism of given species and no organisms of any other species."@en ;
rdfs:subClassOf obo:PCO_0000018 .
obo:IAO_8000012 a rdfs:Class ;
rdfs:label "species subset ontology module" ;
rdfs:comment "A subset ontology that is crafted to either include or exclude a taxonomic grouping of species." ;
rdfs:seeAlso ;
rdfs:subClassOf obo:IAO_8000006 .
obo:bco_0000002 a rdfs:Class ;
rdfs:label "obsolete collecting process"@en ;
rdfs:comment "This term is now redundant and is merged with material sampling process http://purl.obolibrary.org/obo/bco_0000022." ;
rdfs:subClassOf .
obo:OBI_0001137 a rdfs:Class ;
rdfs:label "protein sequencer" ;
rdfs:comment "An device that is used to determine the order of amino acids in protein sequences." ;
rdfs:subClassOf obo:OBI_0000832 .
obo:GO_0032991 a rdfs:Class ;
rdfs:label "protein-containing complex" ;
rdfs:comment "A stable assembly of two or more macromolecules, i.e. proteins, nucleic acids, carbohydrates or lipids, in which at least one component is a protein and the constituent parts function together." ;
rdfs:subClassOf obo:BFO_0000040 .
obo:OBI_0100060 a rdfs:Class ;
rdfs:label "cultured cell population" ;
rdfs:comment "A processed material comprised of a collection of cultured cells that has been continuously maintained together in culture and shares a common propagation history." ;
rdfs:subClassOf obo:OBI_0000047 .
obo:OBI_0000643 a rdf:Property ;
rdfs:label "has grain" ;
rdfs:comment "the relation of the cells in the finger of the skin to the finger, in which an indeterminate number of grains are parts of the whole by virtue of being grains in a collective that is part of the whole, and in which removing one granular part does not nec- essarily damage or diminish the whole. Ontological Whether there is a fixed, or nearly fixed number of parts - e.g. fingers of the hand, chambers of the heart, or wheels of a car - such that there can be a notion of a single one being missing, or whether, by contrast, the number of parts is indeterminate - e.g., cells in the skin of the hand, red cells in blood, or rubber molecules in the tread of the tire of the wheel of the car." ;
rdfs:range obo:CL_0000010 , ;
rdfs:subPropertyOf obo:BFO_0000051 .
obo:ENVO_01000813 a rdfs:Class ;
rdfs:label "astronomical body part"@en ;
rdfs:comment "A material part of an astronomical body." ;
rdfs:subClassOf obo:ENVO_00002297 .
obo:OBI_0000245 a rdfs:Class ;
rdfs:label "organization"@en ;
rdfs:comment "An entity that can bear roles, has members, and has a set of organization rules. Members of organizations are either organizations themselves or individual people. Members can bear specific organization member roles that are determined in the organization rules. The organization rules also determine how decisions are made on behalf of the organization by the organization members."@en ;
rdfs:subClassOf obo:BFO_0000040 .
obo:NCBITaxon_89593 a rdfs:Class ;
rdfs:label "Craniata " ;
rdfs:subClassOf obo:NCBITaxon_7711 .
obo:OBI_0400103 a rdfs:Class ;
rdfs:label "DNA sequencer"@en ;
rdfs:comment "A DNA sequencer is an instrument that determines the order of deoxynucleotides in deoxyribonucleic acid sequences."@en ;
rdfs:subClassOf obo:OBI_0000832 .
obo:IAO_0000003 a rdfs:Class ;
rdfs:label "measurement unit label"@en ;
rdfs:comment "A measurement unit label is as a label that is part of a scalar measurement datum and denotes a unit of measure."@en ;
rdfs:subClassOf obo:IAO_0000009 .
obo:IAO_0000109 a rdfs:Class ;
rdfs:label "measurement datum"@en ;
rdfs:comment "A measurement datum is an information content entity that is a recording of the output of a measurement such as produced by a device."@en ;
rdfs:subClassOf obo:IAO_0000027 .
obo:OBI_0200050 a rdfs:Class ;
rdfs:label "dimensionality reduction"@en ;
rdfs:comment "A dimensionality reduction is data partitioning which transforms each input m-dimensional vector (x_1, x_2, ..., x_m) into an output n-dimensional vector (y_1, y_2, ..., y_n), where n is smaller than m."@en ;
rdfs:subClassOf obo:OBI_0200175 .
obo:PCO_0000030 a rdfs:Class ;
rdfs:label "agricultural household"@en ;
rdfs:comment "A household in which the majority of the income of its members is derived from agricultural activities." ;
rdfs:subClassOf obo:PCO_0000024 .
obo:NCBITaxon_117570 a rdfs:Class ;
rdfs:label "Teleostomi" ;
rdfs:subClassOf obo:NCBITaxon_7776 .
obo:OBI_0000806 a rdfs:Class ;
rdfs:label "material maintenance objective" ;
rdfs:comment "An objective specification maintains some or all of the qualities of a material over time." ;
rdfs:subClassOf obo:IAO_0000005 .
obo:ENVO_00000070 a rdfs:Class ;
rdfs:label "construction" ;
rdfs:comment "A feature that has been constructed by deliberate human effort." ;
rdfs:subClassOf obo:ENVO_01000813 .
obo:IAO_8000005 a rdfs:Class ;
rdfs:label "import ontology module" ;
rdfs:comment "A subset ontology module that is intended to be imported from another ontology." ;
rdfs:seeAlso ;
rdfs:subClassOf obo:IAO_8000006 .
obo:IAO_0000038 a rdfs:Class ;
rdfs:label "graph"@en ;
rdfs:comment "A diagram that presents one or more tuples of information by mapping those tuples in to a two dimensional space in a non arbitrary way."@en ;
rdfs:subClassOf obo:IAO_0000309 .
obo:IAO_8000004 a rdfs:Class ;
rdfs:label "bridge ontology module" ;
rdfs:comment "An ontology module that consists entirely of axioms that connect or bridge two distinct ontology modules. For example, the Uberon-to-ZFA bridge module." ;
rdfs:seeAlso ;
rdfs:subClassOf obo:IAO_8000000 .
obo:PATO_0000186 a rdfs:Class ;
rdfs:label "behavioral quality" ;
rdfs:comment "An organismal quality inhering in a bearer by virtue of the bearer's behavior aggregate of the responses or reactions or movements in a given situation." ;
rdfs:subClassOf obo:PATO_0001995 .
obo:OBI_0200190 a rdfs:Class ;
rdfs:label "clustered data visualization" ;
rdfs:comment "A data visualization which has input of a clustered data set and produces an output of a report graph which is capable of rendering data of this type." ;
rdfs:subClassOf obo:OBI_0200111 .
obo:BCO_0000056 a rdfs:Class ;
rdfs:label "compilation taxonomic inventory process"@en ;
rdfs:comment "A taxonomic inventory process in which a list of taxa of interest is assembled from various combinations of existing taxonomic inventories, rather than generated de novo from observations or samples."@en ;
rdfs:subClassOf obo:BCO_0000047 .
obo:bco_0000025 a rdfs:Class ;
rdfs:label "obsolete locality description"@en ;
rdfs:comment "An information artifact that is about a spatio-temporal region at which a process (such as collecting process, observing process, or material sampling process) occured."@en ;
rdfs:subClassOf .
obo:IAO_8000009 a rdfs:Class ;
rdfs:label "single layer subset ontology module" ;
rdfs:comment "A subset ontology that is largely comprised of a single layer or strata in an ontology class hierarchy. The purpose is typically for rolling up for visualization. The classes in the layer need not be disjoint." ;
rdfs:subClassOf obo:IAO_8000006 .
obo:OBI_0200041 a rdfs:Class ;
rdfs:label "k-means clustering"@en ;
rdfs:comment "A k-means clustering is a data transformation which achieves a class discovery or partitioning objective, which takes as input a collection of objects (represented as points in multidimensional space) and which partitions them into a specified number k of clusters. The algorithm attempts to find the centers of natural clusters in the data. The most common form of the algorithm starts by partitioning the input points into k initial sets, either at random or using some heuristic data. It then calculates the mean point, or centroid, of each set. It constructs a new partition by associating each point with the closest centroid. Then the centroids are recalculated for the new clusters, and the algorithm repeated by alternate applications of these two steps until convergence, which is obtained when the points no longer switch clusters (or alternatively centroids are no longer changed)."@en ;
rdfs:subClassOf obo:OBI_0200171 , obo:OBI_0200175 .
obo:IAO_0000102 a rdfs:Class ;
rdfs:label "data about an ontology part"@en ;
rdfs:comment "data about an ontology part is a data item about a part of an ontology, for example a term"@en ;
rdfs:subClassOf obo:IAO_0000027 .
obo:OBI_0000648 a rdfs:Class ;
rdfs:label "clustered data set"@en ;
rdfs:comment "A data set that is produced as the output of a class discovery data transformation and consists of a data set with assigned discovered class labels."@en ;
rdfs:subClassOf obo:IAO_0000100 .
obo:bco_0000000 a rdfs:Class ;
rdfs:label "obsolete evidence role"@en ;
rdfs:comment "A role that is borne by some entity as a result of the entity providing evidence to support an assertion." ;
rdfs:subClassOf .
obo:PATO_0000001 a rdfs:Class ;
rdfs:label "quality" ;
rdfs:comment "A dependent entity that inheres in a bearer by virtue of how the bearer is related to other entities" .
obo:IAO_0000010 a rdfs:Class ;
rdfs:label "software"@en ;
rdfs:comment """Software is a plan specification composed of a series of instructions that can be
interpreted by or directly executed by a processing unit."""@en ;
rdfs:subClassOf obo:IAO_0000104 .
obo:SO_0000001 a rdfs:Class ;
rdfs:label "region" ;
rdfs:comment "A sequence_feature with an extent greater than zero. A nucleotide region is composed of bases and a polypeptide region is composed of amino acids." ;
rdfs:subClassOf obo:BFO_0000031 .
obo:NCBITaxon_9347 a rdfs:Class ;
rdfs:label "Eutheria" ;
rdfs:subClassOf obo:NCBITaxon_32525 .
obo:PATO_0002201 a rdfs:Class ;
rdfs:label "handedness" ;
rdfs:comment "A behavioral quality inhering ina bearer by virtue of the bearer's unequal distribution of fine motor skill between its left and right hands or feet." ;
rdfs:subClassOf obo:PATO_0000186 .
obo:OBI_0002215 a rdfs:Class ;
rdfs:label "histologic grade for ovarian tumor" ;
rdfs:comment "A categorical value specification that is a histologic grade assigned to a ovarian tumor." ;
rdfs:subClassOf obo:OBI_0001930 .
obo:IAO_8000019 a rdfs:Class ;
rdfs:label "ontology module subsetted by OWL profile" ;
rdfs:subClassOf obo:IAO_8000017 .
obo:OBI_0001010 a rdfs:Class ;
rdfs:label "nucleic acid extract" ;
rdfs:comment "An extract that is the output of an extraction process in which nucleic acid molecules are isolated from a specimen." ;
rdfs:subClassOf obo:OBI_0000423 , obo:OBI_0000953 .
obo:OBI_0000112 a rdfs:Class ;
rdfs:label "specimen role"@en ;
rdfs:comment "a role borne by a material entity that is gained during a specimen collection process and that can be realized by use of the specimen in an investigation"@en ;
rdfs:subClassOf obo:BFO_0000023 .
obo:CARO_0001010 a rdfs:Class ;
rdfs:label "organism or virus or viroid" ;
rdfs:comment "Material anatomical entity that is a member of an individual species or is a viral or viroid particle." ;
rdfs:subClassOf obo:PCO_0000031 .
obo:OBI_0200175 a rdfs:Class ;
rdfs:label "class discovery data transformation"@en ;
rdfs:comment "A class discovery data transformation (sometimes called unsupervised classification) is a data transformation that has objective class discovery."@en ;
rdfs:subClassOf obo:OBI_0200000 .
obo:BFO_0000003 a rdfs:Class ;
rdfs:label "occurrent"@en ;
rdfs:comment "An entity that has temporal parts and that happens, unfolds or develops through time."@en ;
rdfs:subClassOf obo:BFO_0000001 .
obo:RO_0000057 a rdf:Property ;
rdfs:label "has participant"@en ;
rdfs:comment "a relation between a process and a continuant, in which the continuant is somehow involved in the process"@en ;
rdfs:domain obo:BFO_0000003 ;
rdfs:range obo:BFO_0000002 .
obo:BFO_0000066 a rdf:Property ;
rdfs:label "occurs in"@en ;
rdfs:comment "b occurs_in c =def b is a process and c is a material entity or immaterial entity& there exists a spatiotemporal region r and b occupies_spatiotemporal_region r.& forall(t) if b exists_at t then c exists_at t & there exist spatial regions s and s’ where & b spatially_projects_onto s at t& c is occupies_spatial_region s’ at t& s is a proper_continuant_part_of s’ at t"@en ;
rdfs:domain obo:BFO_0000003 ;
rdfs:range obo:BFO_0000004 .
obo:OBI_0600047 a rdfs:Class ;
rdfs:label "sequencing assay" ;
rdfs:comment "An assay the uses chemical or biochemical means to infer the sequence of a biomaterial" ;
rdfs:subClassOf obo:OBI_0000070 .
obo:CHEBI_16991 a rdfs:Class ;
rdfs:label "deoxyribonucleic acid" ;
rdfs:comment "High molecular weight, linear polymers, composed of nucleotides containing deoxyribose and linked by phosphodiester bonds; DNA contain the genetic information of organisms." ;
rdfs:subClassOf obo:CHEBI_33696 .
obo:NCBITaxon_33213 a rdfs:Class ;
rdfs:label "Bilateria" ;
rdfs:subClassOf obo:NCBITaxon_6072 .
obo:OBI_0200178 a rdfs:Class ;
rdfs:label "class discovery objective"@en ;
rdfs:comment "A class discovery objective (sometimes called unsupervised classification) is a data transformation objective where the aim is to organize input data (typically vectors of attributes) into classes, where the number of classes and their specifications are not known a priori. Depending on usage, the class assignment can be definite or probabilistic."@en ;
rdfs:subClassOf obo:OBI_0200166 .
obo:BCO_0000032 a rdfs:Class ;
rdfs:label "organismal museum collection"@en ;
rdfs:comment "A museum collection that has as member part a material sample that was derived from an organism."@en ;
rdfs:subClassOf obo:BCO_0000031 .
obo:IAO_8000015 a rdfs:Class ;
rdfs:label "template generated ontology module" ;
rdfs:comment "An ontology module that is automatically generated from a template specification and fillers for slots in that template." ;
rdfs:seeAlso , , ;
rdfs:subClassOf obo:IAO_8000014 .
a rdfs:Class ;
rdfs:label "Preserved Specimen"@en-US ;
rdfs:comment "A specimen that has been preserved."@en-US ;
rdfs:subClassOf , obo:OBI_0100051 .
obo:bco_0000006 a rdfs:Class ;
rdfs:label "obolete printed observational report"@en ;
rdfs:comment "A printed report that records the outcome of some observing process."@en ;
rdfs:subClassOf obo:bco_0000005 .
a rdfs:Class ;
rdfs:label "Living Specimen"@en-US ;
rdfs:comment "A specimen that is alive."@en-US ;
rdfs:subClassOf , obo:OBI_0100051 .
obo:ENVO_00002297 a rdfs:Class ;
rdfs:label "environmental feature" ;
rdfs:comment "A material entity which determines an environmental system." ;
rdfs:subClassOf obo:BFO_0000040 .
obo:OBI_0100051 a rdfs:Class ;
rdfs:label "specimen"@en ;
rdfs:comment "A material entity that has the specimen role."@en ;
rdfs:subClassOf obo:BFO_0000040 , .
a rdfs:Class ;
rdfs:label "Measurement or Fact"@en-US ;
rdfs:comment "A measurement of or fact about an rdfs:Resource (http://www.w3.org/2000/01/rdf-schema#Resource)."@en-US ;
rdfs:subClassOf .
obo:bco_0000028 a rdfs:Class ;
rdfs:label "obsolete unsuccessful material sampling process"@en ;
rdfs:comment "A material sampling process that has as output exactly zero material samples."@en ;
rdfs:subClassOf .
obo:BCO_0000063 a rdfs:Class ;
rdfs:label "obsolete preserved specimen"@en ;
rdfs:comment "A specimen that has been preserved."@en ;
rdfs:subClassOf .
obo:CHEBI_33697 a rdfs:Class ;
rdfs:label "ribonucleic acid" ;
rdfs:comment "High molecular weight, linear polymers, composed of nucleotides containing ribose and linked by phosphodiester bonds; RNA is central to the synthesis of proteins." ;
rdfs:subClassOf obo:CHEBI_33696 .
obo:OBI_0000456 a rdfs:Class ;
rdfs:label "material transformation objective"@en ;
rdfs:comment "an objective specifiction that creates an specific output object from input materials."@en ;
rdfs:subClassOf obo:IAO_0000005 .
obo:OBI_0600005 a rdfs:Class ;
rdfs:label "collecting specimen from organism"@en ;
rdfs:comment "a process with the objective to obtain a material entity that was part of an organism for potential future use in an investigation"@en ;
rdfs:subClassOf obo:OBI_0000659 .
obo:PCO_0000000 a rdfs:Class ;
rdfs:label "collection of organisms"@en ;
rdfs:comment "A material entity that consists of two or more organisms, viruses, or viroids."@en ;
rdfs:subClassOf obo:BFO_0000027 , obo:PCO_0000031 .
obo:OBI_0001977 a rdfs:Class ;
rdfs:label "cytometry assay" ;
rdfs:comment "An assay that measures properties of cells." ;
rdfs:subClassOf obo:OBI_0000070 .
obo:bco_0000016 a rdfs:Class ;
rdfs:label "obsolete submitting process"@en ;
rdfs:comment "A planned process whereby a person submits a material sample to an organization." ;
rdfs:subClassOf .
obo:OBI_0200179 a rdfs:Class ;
rdfs:label "class prediction objective"@en ;
rdfs:comment """A class prediction objective (sometimes called supervised classification) is a data transformation objective where the aim is to create a predictor from training data through a machine learning technique. The training data consist of pairs of objects (typically vectors of attributes) and
class labels for these objects. The resulting predictor can be used to attach class labels to any valid novel input object. Depending on usage, the prediction can be definite or probabilistic. A classification is learned from the training data and can then be tested on test data."""@en ;
rdfs:subClassOf obo:OBI_0200166 .
obo:NCBITaxon_314293 a rdfs:Class ;
rdfs:label "Simiiformes" ;
rdfs:subClassOf obo:NCBITaxon_376913 .
obo:NCBITaxon_9604 a rdfs:Class ;
rdfs:label "Hominidae" ;
rdfs:subClassOf obo:NCBITaxon_314295 .
obo:IAO_8000020 a rdfs:Class ;
rdfs:label "EL++ ontology module" ;
rdfs:subClassOf obo:IAO_8000019 .
obo:BFO_0000031 a rdfs:Class ;
rdfs:label "generically dependent continuant"@en ;
rdfs:comment "A continuant that is dependent on one or other independent continuant bearers. For every instance of A requires some instance of (an independent continuant type) B but which instance of B serves can change from time to time."@en ;
rdfs:subClassOf obo:BFO_0000002 .
obo:OBI_0000067 a rdfs:Class ;
rdfs:label "evaluant role"@en ;
rdfs:comment "a role that inheres in a material entity that is realized in an assay in which data is generated about the bearer of the evaluant role"@en ;
rdfs:subClassOf obo:BFO_0000023 .
obo:RO_0000052 a rdf:Property ;
rdfs:label "inheres in"@en ;
rdfs:comment "a relation between a specifically dependent continuant (the dependent) and an independent continuant (the bearer), in which the dependent specifically depends on the bearer for its existence"@en ;
rdfs:range .
a rdfs:Class ;
rdfs:comment "An unconstrained type or object" .
obo:BCO_0000042 a rdfs:Class ;
rdfs:label "taxonomic identification process"@en ;
rdfs:comment "A planned process by which an organismal entity is associated with a taxon or taxa." .
obo:IAO_0000005 a rdfs:Class ;
rdfs:label "objective specification"@en ;
rdfs:comment "a directive information entity that describes an intended process endpoint. When part of a plan specification the concretization is realized in a planned process in which the bearer tries to effect the world so that the process endpoint is achieved."@en ;
rdfs:subClassOf obo:IAO_0000033 .
obo:OBI_0200000 a rdfs:Class ;
rdfs:label "data transformation"@en ;
rdfs:comment "A planned process that produces output data from input data."@en ;
rdfs:subClassOf obo:OBI_0000011 .
obo:OBI_0000659 a rdfs:Class ;
rdfs:label "specimen collection process" ;
rdfs:comment "A planned process with the objective of collecting a specimen." ;
rdfs:subClassOf obo:OBI_0000011 .
obo:BCO_0000052 a rdfs:Class ;
rdfs:label "open search taxonomic inventory process"@en ;
rdfs:comment "A taxonomic inventory process in which the search is restricted within a larger defined geographic area, but where effort isn't even or complete across the region, and thus not a comprehensive accounting of taxa of interest. Temporal duration is typically longer than restricted searches, lasting hours to several days." ;
rdfs:subClassOf obo:BCO_0000047 .
a rdfs:Class ;
rdfs:subClassOf obo:IAO_0000102 .
a rdfs:Class ;
rdfs:label "Identification"@en-US ;
rdfs:comment "A taxonomic determination (e.g., the assignment to a taxon)."@en-US ;
rdfs:subClassOf obo:BCO_0000042 .
obo:bco_0000022 a rdfs:Class ;
rdfs:label "obsolete material sampling process"@en ;
rdfs:comment "A planned process that includes selecting a material entity for study, physically extracting the material entity, and submitting the material entity to some institution for preservation or study."@en ;
rdfs:subClassOf .
obo:OBI_0000811 a rdfs:Class ;
rdfs:label "primary structure of DNA macromolecule" ;
rdfs:comment "a quality of a DNA molecule that inheres in its bearer due to the order of its DNA nucleotide residues." ;
rdfs:subClassOf obo:SO_0000001 .
obo:IAO_8000008 a rdfs:Class ;
rdfs:label "analysis subset ontology module" ;
rdfs:comment "An ontology module that is intended for usage in analysis or discovery applications." ;
rdfs:subClassOf obo:IAO_8000006 .
obo:OBI_0000727 a rdfs:Class ;
rdfs:label "k-nearest neighbors"@en ;
rdfs:comment "A k-nearest neighbors is a data transformation which achieves a class discovery or partitioning objective, in which an input data object with vector y is assigned to a class label based upon the k closest training data set points to y; where k is the largest value that class label is assigned."@en ;
rdfs:subClassOf obo:OBI_0200171 , obo:OBI_0200175 .
obo:IAO_0000179 a rdfs:Class ;
rdfs:label "histogram"@en ;
rdfs:comment """A histogram is a report graph which is a statistical description of a
distribution in terms of occurrence frequencies of different event classes."""@en ;
rdfs:subClassOf obo:IAO_0000038 .
obo:NCBITaxon_40674 a rdfs:Class ;
rdfs:label "Mammalia" ;
rdfs:subClassOf obo:NCBITaxon_32524 .
obo:NCBITaxon_10239 a rdfs:Class ;
rdfs:label "Viruses" ;
rdfs:subClassOf obo:OBI_0100026 .
obo:IAO_0000027 a rdfs:Class ;
rdfs:label "data item"@en ;
rdfs:comment "a data item is an information content entity that is intended to be a truthful statement about something (modulo, e.g., measurement precision or other systematic errors) and is constructed/acquired by a method which reliably tends to produce (approximately) truthful statements."@en ;
rdfs:subClassOf obo:IAO_0000030 .
obo:bco_0000033 a rdfs:Class ;
rdfs:label "obsolete institution"@en ;
rdfs:comment "Replaced by OBI organization. Request institution as synonym in OBI." ;
rdfs:subClassOf .
obo:IAO_0000310 a rdfs:Class ;
rdfs:label "document"@en ;
rdfs:comment "A collection of information content entities intended to be understood together as a whole"@en ;
rdfs:subClassOf obo:IAO_0000030 .
obo:ENVO_01000744 a rdfs:Class ;
rdfs:label "human dwelling"@en ;
rdfs:comment "A self-contained constructed feature used by one or more households as a home, such as a house, apartment, mobile home, houseboat or other 'substantial' structure. A dwelling typically includes nearby outbuildings, sheds etc. within the curtilage of the property, excluding any 'open fields beyond'. It has significance in relation to search and seizure, conveyancing of real property, burglary, trespass, and land use planning." ;
rdfs:subClassOf obo:ENVO_00000070 .
obo:NCBITaxon_2 a rdfs:Class ;
rdfs:label "Bacteria" ;
rdfs:subClassOf obo:NCBITaxon_131567 , obo:OBI_0100026 .
obo:bco_0000039 a rdfs:Class ;
rdfs:label "obsolete protocol governed sampling activity"@en ;
rdfs:comment "If sampling is a OBI planned process, that captures that it is protocal governed." ;
rdfs:subClassOf .
obo:OBI_0002076 a rdfs:Class ;
rdfs:label "collection of specimens"@en ;
rdfs:comment "A material entity that has two or more specimens as its parts."@en ;
rdfs:subClassOf obo:BFO_0000040 .
obo:NCBITaxon_32524 a rdfs:Class ;
rdfs:label "Amniota" ;
rdfs:subClassOf obo:NCBITaxon_32523 .
obo:PCO_0000018 a rdfs:Class ;
rdfs:label "single-species collection of organisms"@en ;
rdfs:comment "A material entity that has as parts two or more organisms, viruses, or viroids of the same species and no members of any other species."@en ;
rdfs:subClassOf obo:PCO_0000000 .
obo:BCO_0000046 a rdfs:Class ;
rdfs:label "material target of observation role"@en ;
rdfs:comment "A role that is borne by some material entity and is realized by the material entity being the input of an observing process." ;
rdfs:subClassOf obo:BFO_0000023 .
obo:BCO_0000057 a rdf:Property ;
rdfs:label "taxonomic inventory metadata preferred name"@en ;
rdfs:range xsd:string ;
rdfs:subPropertyOf obo:IAO_0000118 .
obo:BCO_0000058 a rdf:Property ;
rdfs:label "obsolete has role"@en ;
rdfs:comment "The relationship between an independent continuant and a role. Slightly more specific than the parent class bearer of." ;
rdfs:range .
obo:BCO_0000060 a rdf:Property ;
rdfs:label "BCO preferred label"@en ;
rdfs:range xsd:string .
obo:BCO_0000067 a rdf:Property ;
rdfs:label "derives from by planned process"@en ;
rdfs:range .
obo:BCO_0000068 a rdf:Property ;
rdfs:label "is derived into by planned process"@en ;
rdfs:range .
obo:BCO_0000074 a rdf:Property ;
rdfs:label "dwc_bco mapping"@en ;
rdfs:range xsd:string .
obo:BCO_0000087 a rdf:Property ;
rdfs:label "member of taxon"@en ;
rdfs:comment "A shortcut relation to an organsimal entity to a taxon or taxa." ;
rdfs:range xsd:string ;
rdfs:subPropertyOf obo:BFO_0000050 .
obo:BFO_0000050 a rdf:Property ;
rdfs:label "part of"@en ;
rdfs:comment "a core relation that holds between a part and its whole"@en ;
rdfs:seeAlso ;
rdfs:range .
obo:BFO_0000067 a rdf:Property ;
rdfs:label "contains process"@en ;
rdfs:comment "[copied from inverse property 'occurs in'] b occurs_in c =def b is a process and c is a material entity or immaterial entity& there exists a spatiotemporal region r and b occupies_spatiotemporal_region r.& forall(t) if b exists_at t then c exists_at t & there exist spatial regions s and s’ where & b spatially_projects_onto s at t& c is occupies_spatial_region s’ at t& s is a proper_continuant_part_of s’ at t"@en ;
rdfs:range .
obo:BFO_0000179 a rdf:Property ;
rdfs:label "BFO OWL specification label"@en ;
rdfs:comment "Relates an entity in the ontology to the name of the variable that is used to represent it in the code that generates the BFO OWL file from the lispy specification."@en ;
rdfs:range xsd:string .
obo:BFO_0000180 a rdf:Property ;
rdfs:label "BFO CLIF specification label"@en ;
rdfs:comment "Relates an entity in the ontology to the term that is used to represent it in the the CLIF specification of BFO2"@en ;
rdfs:range xsd:string .
obo:IAO_0000111 a rdf:Property ;
rdfs:label "editor preferred label" ;
rdfs:comment "The concise, meaningful, and human-friendly name for a class or property preferred by the ontology developers. (US-English)"@en ;
rdfs:range xsd:string .
obo:IAO_0000112 a rdf:Property ;
rdfs:label "example of usage"@en ;
rdfs:comment "A phrase describing how a term should be used and/or a citation to a work which uses it. May also include other kinds of examples that facilitate immediate understanding, such as widely know prototypes or instances of a class, or cases where a relation is said to hold."@en ;
rdfs:range xsd:string .
obo:IAO_0000113 a rdf:Property ;
rdfs:label "in branch"@en ;
rdfs:comment "An annotation property indicating which module the terms belong to. This is currently experimental and not implemented yet."@en ;
rdfs:range xsd:string .
obo:IAO_0000114 a rdf:Property ;
rdfs:label "has curation status"@en ;
rdfs:range xsd:string .
obo:IAO_0000115 a rdf:Property ;
rdfs:label "textual definition" ;
rdfs:comment "The official OBI definition, explaining the meaning of a class or property. Shall be Aristotelian, formalized and normalized. Can be augmented with colloquial definitions."@en ;
rdfs:range xsd:string .
obo:IAO_0000116 a rdf:Property ;
rdfs:label "editor note" ;
rdfs:comment "An administrative note intended for its editor. It may not be included in the publication version of the ontology, so it should contain nothing necessary for end users to understand the ontology."@en ;
rdfs:range xsd:string .
obo:IAO_0000117 a rdf:Property ;
rdfs:label "term editor"@en ;
rdfs:comment "Name of editor entering the term in the file. The term editor is a point of contact for information regarding the term. The term editor may be, but is not always, the author of the definition, which may have been worked upon by several people"@en ;
rdfs:range xsd:string .
obo:IAO_0000118 a rdf:Property ;
rdfs:label "alternative term"@en ;
rdfs:comment "An alternative name for a class or property which means the same thing as the preferred name (semantically equivalent)"@en ;
rdfs:range xsd:string .
obo:IAO_0000119 a rdf:Property ;
rdfs:label "definition source"@en ;
rdfs:comment "formal citation, e.g. identifier in external database to indicate / attribute source(s) for the definition. Free text indicate / attribute source(s) for the definition. EXAMPLE: Author Name, URI, MeSH Term C04, PUBMED ID, Wiki uri on 31.01.2007"@en ;
rdfs:range xsd:string .
obo:IAO_0000231 a rdf:Property ;
rdfs:label "has obsolescence reason"@en ;
rdfs:comment "Relates an annotation property to an obsolescence reason. The values of obsolescence reasons come from a list of predefined terms, instances of the class obsolescence reason specification."@en ;
rdfs:range xsd:string .
obo:IAO_0000232 a rdf:Property ;
rdfs:label "curator note"@en ;
rdfs:comment "An administrative note of use for a curator but of no use for a user"@en ;
rdfs:range xsd:string .
obo:IAO_0000233 a rdf:Property ;
rdfs:label "term tracker item"@en ;
rdfs:comment "An IRI or similar locator for a request or discussion of an ontology term." ;
rdfs:range xsd:string .
obo:IAO_0000234 a rdf:Property ;
rdfs:label "ontology term requester"@en ;
rdfs:comment "The name of the person, project, or organization that motivated inclusion of an ontology term by requesting its addition." ;
rdfs:range xsd:string .
obo:IAO_0000411 a rdf:Property ;
rdfs:label "is denotator type" ;
rdfs:comment "relates an class defined in an ontology, to the type of it's denotator" ;
rdfs:range xsd:string .
obo:IAO_0000412 a rdf:Property ;
rdfs:label "imported from"@en ;
rdfs:comment "For external terms/classes, the ontology from which the term was imported"@en ;
rdfs:range xsd:string .
obo:IAO_0000424 a rdf:Property ;
rdfs:label "expand expression to"@en ;
rdfs:comment "A macro expansion tag applied to an object property (or possibly a data property) which can be used by a macro-expansion engine to generate more complex expressions from simpler ones"@en ;
rdfs:range xsd:string .
obo:IAO_0000425 a rdf:Property ;
rdfs:label "expand assertion to"@en ;
rdfs:comment "A macro expansion tag applied to an annotation property which can be expanded into a more detailed axiom."@en ;
rdfs:range xsd:string .
obo:IAO_0000426 a rdf:Property ;
rdfs:label "first order logic expression"@en ;
rdfs:range xsd:string .
obo:IAO_0000427 a rdf:Property ;
rdfs:label "antisymmetric property"@en ;
rdfs:comment "use boolean value xsd:true to indicate that the property is an antisymmetric property"@en ;
rdfs:range xsd:string .
obo:IAO_0000589 a rdf:Property ;
rdfs:label "OBO foundry unique label"@en ;
rdfs:comment "An alternative name for a class or property which is unique across the OBO Foundry."@en ;
rdfs:range xsd:string .
obo:IAO_0000596 a rdf:Property ;
rdfs:label "has ID digit count"@en ;
rdfs:comment "Relates an ontology used to record id policy to the number of digits in the URI. The URI is: the 'has ID prefix\" annotation property value concatenated with an integer in the id range (left padded with \"0\"s to make this many digits)" ;
rdfs:range xsd:string .
obo:IAO_0000597 a rdf:Property ;
rdfs:label "has ID range allocated to"@en ;
rdfs:comment "Relates a datatype that encodes a range of integers to the name of the person or organization who can use those ids constructed in that range to define new terms" ;
rdfs:range xsd:string .
obo:IAO_0000598 a rdf:Property ;
rdfs:label "has ID policy for" ;
rdfs:comment "Relating an ontology used to record id policy to the ontology namespace whose policy it manages" ;
rdfs:range xsd:string .
obo:IAO_0000599 a rdf:Property ;
rdfs:label "has ID prefix"@en ;
rdfs:comment "Relates an ontology used to record id policy to a prefix concatenated with an integer in the id range (left padded with \"0\"s to make this many digits) to construct an ID for a term being created." ;
rdfs:range xsd:string .
obo:IAO_0000600 a rdf:Property ;
rdfs:label "elucidation"@en ;
rdfs:range xsd:string .
obo:IAO_0000601 a rdf:Property ;
rdfs:label "has associated axiom(nl)"@en ;
rdfs:range xsd:string .
obo:IAO_0000602 a rdf:Property ;
rdfs:label "has associated axiom(fol)"@en ;
rdfs:range xsd:string .
obo:IAO_0000603 a rdf:Property ;
rdfs:label "is allocated id range"@en ;
rdfs:comment "Relates an ontology IRI to an (inclusive) range of IRIs in an OBO name space. The range is give as, e.g. \"IAO_0020000-IAO_0020999\""@en ;
rdfs:range xsd:string .
obo:IAO_0006011 a rdf:Property ;
rdfs:label "may be identical to"@en ;
rdfs:comment "A annotation relationship between two terms in an ontology that may refer to the same (natural) type but where more evidence is required before terms are merged." ;
rdfs:range xsd:string .
obo:IAO_0006012 a rdf:Property ;
rdfs:label "scheduled for obsoletion on or after"@en ;
rdfs:comment "Used when the class or object is scheduled for obsoletion/deprecation on or after a particular date."@en ;
rdfs:range xsd:dateTime .
obo:IAO_0010000 a rdf:Property ;
rdfs:label "has axiom label"@en ;
rdfs:range xsd:string .
obo:IAO_0100001 a rdf:Property ;
rdfs:label "term replaced by"@en ;
rdfs:comment "Use on obsolete terms, relating the term to another term that can be used as a substitute"@en ;
rdfs:range xsd:string .
obo:OBI_0000295 a rdf:Property ;
rdfs:label "is_specified_input_of" ;
rdfs:comment "A relation between a planned process and a continuant participating in that process that is not created during the process. The presence of the continuant during the process is explicitly specified in the plan specification which the process realizes the concretization of."@en ;
rdfs:range obo:OBI_0000011 ;
rdfs:subPropertyOf obo:RO_0000056 .
obo:OBI_0001847 a rdf:Property ;
rdfs:label "ISA alternative term"@en ;
rdfs:comment "An alternative term used by the ISA tools project (http://isa-tools.org)." ;
rdfs:range xsd:string .
obo:OBI_9991118 a rdf:Property ;
rdfs:label "IEDB alternative term" ;
rdfs:comment "An alternative term used by the IEDB." ;
rdfs:range xsd:string .
obo:RO_0000053 a rdf:Property ;
rdfs:label "bearer of"@en ;
rdfs:comment "a relation between an independent continuant (the bearer) and a specifically dependent continuant (the dependent), in which the dependent specifically depends on the bearer for its existence"@en ;
rdfs:range obo:BFO_0000020 .
obo:RO_0000080 a rdf:Property ;
rdfs:label "quality of"@en ;
rdfs:comment "a relation between a quality and an independent continuant (the bearer), in which the quality specifically depends on the bearer for its existence"@en ;
rdfs:range xsd:string ;
rdfs:subPropertyOf obo:RO_0000052 .
obo:RO_0000081 a rdf:Property ;
rdfs:label "role of"@en ;
rdfs:comment "a relation between a role and an independent continuant (the bearer), in which the role specifically depends on the bearer for its existence"@en ;
rdfs:range xsd:string ;
rdfs:subPropertyOf obo:RO_0000052 .
obo:RO_0000086 a rdf:Property ;
rdfs:label "has quality"@en ;
rdfs:comment "a relation between an independent continuant (the bearer) and a quality, in which the quality specifically depends on the bearer for its existence"@en ;
rdfs:range obo:BFO_0000019 ;
rdfs:subPropertyOf obo:RO_0000053 .
obo:RO_0000092 a rdf:Property ;
rdfs:label "disposition of"@en ;
rdfs:range xsd:string ;
rdfs:subPropertyOf obo:RO_0000052 .
obo:RO_0001001 a rdf:Property ;
rdfs:label "derives into"@en ;
rdfs:comment "a relation between two distinct material entities, the old entity and the new entity, in which the new entity begins to exist when the old entity ceases to exist, and the new entity inherits the significant portion of the matter of the old entity"@en ;
rdfs:range .
obo:RO_0001015 a rdf:Property ;
rdfs:label "location of"@en ;
rdfs:comment "a relation between two independent continuants, the location and the target, in which the target is entirely within the location"@en ;
rdfs:range .
obo:RO_0001900 a rdf:Property ;
rdfs:label "temporal interpretation"@en ;
rdfs:comment "An assertion that holds between an OWL Object Property and a temporal interpretation that elucidates how OWL Class Axioms that use this property are to be interpreted in a temporal context." ;
rdfs:range xsd:string .
obo:RO_0002000 a rdf:Property ;
rdfs:label "2D boundary of"@en ;
rdfs:comment "a relation between a 2D immaterial entity (the boundary) and a material entity, in which the boundary delimits the material entity"@en ;
rdfs:range .
obo:RO_0002350 a rdf:Property ;
rdfs:label "member of"@en ;
rdfs:comment "is member of is a mereological relation between a item and a collection." ;
rdfs:range xsd:string ;
rdfs:subPropertyOf obo:BFO_0000050 .
a rdf:Property ;
rdfs:range xsd:string .
a rdf:Property ;
rdfs:comment "Organizational term to help define related terms. Do not use for data annotation with Darwin Core."@en ;
rdfs:range .
a rdf:Property ;
rdfs:comment "Organizational term to help define related terms. Do not use for data annotation with Darwin Core."@en ;
rdfs:range .
a rdf:Property ;
rdfs:range .
a rdf:Property ;
rdfs:label "Accepted Name Usage"@en-US ;
rdfs:comment "The full name, with authorship and date information if known, of the currently valid (zoological) or accepted (botanical) taxon."@en-US ;
rdfs:range .
a rdf:Property ;
rdfs:label "According To"@en-US ;
rdfs:comment "Organizational term to help define related terms. Do not use for data annotation."@en , "Abstract term to attribute information to a source."@en-US ;
rdfs:range .
a rdf:Property ;
rdfs:label "Associated Media"@en-US ;
rdfs:comment "A list (concatenated and separated) of identifiers (publication, global unique identifier, URI) of media associated with the Occurrence."@en-US ;
rdfs:range .
a rdf:Property ;
rdfs:label "Associated Occurrences"@en-US ;
rdfs:comment "A list (concatenated and separated) of identifiers of other Occurrence records and their associations to this Occurrence."@en-US ;
rdfs:range .
a rdf:Property ;
rdfs:label "Associated Organisms"@en-US ;
rdfs:comment "A list (concatenated and separated) of identifiers of other Organisms and their associations to this Organism."@en-US ;
rdfs:range .
a rdf:Property ;
rdfs:label "Associated References"@en-US ;
rdfs:comment "A list (concatenated and separated) of identifiers (publication, bibliographic reference, global unique identifier, URI) of literature associated with the Occurrence."@en-US ;
rdfs:range .
a rdf:Property ;
rdfs:label "Associated Sequences"@en-US ;
rdfs:comment "A list (concatenated and separated) of identifiers (publication, global unique identifier, URI) of genetic sequence information associated with the Occurrence."@en-US ;
rdfs:range .
a rdf:Property ;
rdfs:label "Associated Taxa"@en-US ;
rdfs:comment "A list (concatenated and separated) of identifiers or names of taxa and their associations with the Occurrence."@en-US ;
rdfs:range .
a rdf:Property ;
rdfs:label "dwc_terms status"@en ;
rdfs:range xsd:string .
a rdf:Property ;
rdfs:label "Basis of Record"@en-US ;
rdfs:comment "The specific nature of the data record - a subtype of the dcterms:type. Recommended best practice is to use a controlled vocabulary such as the Darwin Core Type Vocabulary (http://rs.tdwg.org/dwc/terms/type-vocabulary/index.htm)."@en-US ;
rdfs:range .
a rdf:Property ;
rdfs:label "Bed"@en-US ;
rdfs:comment "The full name of the lithostratigraphic bed from which the cataloged item was collected."@en-US ;
rdfs:range .
a rdf:Property ;
rdfs:label "Behavior"@en-US ;
rdfs:comment "A description of the behavior shown by the subject at the time the Occurrence was recorded. Recommended best practice is to use a controlled vocabulary."@en-US ;
rdfs:range .
a rdf:Property ;
rdfs:label "Catalog Number"@en-US ;
rdfs:comment "An identifier (preferably unique) for the record within the data set or collection."@en-US ;
rdfs:range .
a rdf:Property ;
rdfs:label "Class"@en-US ;
rdfs:comment "The full scientific name of the class in which the taxon is classified."@en-US ;
rdfs:range .
a rdf:Property ;
rdfs:label "Collection Code"@en-US ;
rdfs:comment "The name, acronym, coden, or initialism identifying the collection or data set from which the record was derived."@en-US ;
rdfs:range .
a rdf:Property ;
rdfs:label "Collection ID"@en-US ;
rdfs:comment "An identifier for the collection or dataset from which the record was derived. For physical specimens, the recommended best practice is to use the identifier in a collections registry such as the Biodiversity Collections Index (http://www.biodiversitycollectionsindex.org/)."@en-US ;
rdfs:range .
a rdf:Property ;
rdfs:label "Continent"@en-US ;
rdfs:comment "The name of the continent in which the Location occurs. Recommended best practice is to use a controlled vocabulary such as the Getty Thesaurus of Geographic Names."@en-US ;
rdfs:range .
a rdf:Property ;
rdfs:label "Coordinate Precision"@en-US ;
rdfs:comment "A decimal representation of the precision of the coordinates given in the decimalLatitude and decimalLongitude."@en-US ;
rdfs:range .
a rdf:Property ;
rdfs:label "Coordinate Uncertainty In Meters"@en-US ;
rdfs:comment "The horizontal distance (in meters) from the given decimalLatitude and decimalLongitude describing the smallest circle containing the whole of the Location. Leave the value empty if the uncertainty is unknown, cannot be estimated, or is not applicable (because there are no coordinates). Zero is not a valid value for this term."@en-US ;
rdfs:range .
a rdf:Property ;
rdfs:label "Country"@en-US ;
rdfs:comment "The name of the country or major administrative unit in which the Location occurs. Recommended best practice is to use a controlled vocabulary such as the Getty Thesaurus of Geographic Names."@en-US ;
rdfs:range .
a rdf:Property ;
rdfs:label "Country Code"@en-US ;
rdfs:comment "The standard code for the country in which the Location occurs. Recommended best practice is to use ISO 3166-1-alpha-2 country codes."@en-US ;
rdfs:range .
a rdf:Property ;
rdfs:label "County"@en-US ;
rdfs:comment "The full, unabbreviated name of the next smaller administrative region than stateProvince (county, shire, department, etc.) in which the Location occurs."@en-US ;
rdfs:range .
a rdf:Property ;
rdfs:label "Data Generalizations"@en-US ;
rdfs:comment "Actions taken to make the shared data less specific or complete than in its original form. Suggests that alternative data of higher quality may be available on request."@en-US ;
rdfs:range .
a rdf:Property ;
rdfs:label "Dataset Name"@en-US ;
rdfs:comment "The name identifying the data set from which the record was derived."@en-US ;
rdfs:range .
a rdf:Property ;
rdfs:label "Date Identified"@en-US ;
rdfs:comment "The date on which the subject was identified as representing the Taxon. Recommended best practice is to use an encoding scheme, such as ISO 8601:2004(E)."@en-US ;
rdfs:range xsd:string ;
rdfs:subPropertyOf .
a rdf:Property ;
rdfs:label "Day"@en-US ;
rdfs:comment "The integer day of the month on which the Event occurred."@en-US ;
rdfs:range .
a rdf:Property ;
rdfs:label "Decimal Latitude"@en-US ;
rdfs:comment "The geographic latitude (in decimal degrees, using the spatial reference system given in geodeticDatum) of the geographic center of a Location. Positive values are north of the Equator, negative values are south of it. Legal values lie between -90 and 90, inclusive."@en-US ;
rdfs:range .
a rdf:Property ;
rdfs:label "Decimal Longitude"@en-US ;
rdfs:comment "The geographic longitude (in decimal degrees, using the spatial reference system given in geodeticDatum) of the geographic center of a Location. Positive values are east of the Greenwich Meridian, negative values are west of it. Legal values lie between -180 and 180, inclusive."@en-US ;
rdfs:range .
a rdf:Property ;
rdfs:label "Disposition"@en-US ;
rdfs:comment "The current state of a specimen with respect to the collection identified in collectionCode or collectionID. Recommended best practice is to use a controlled vocabulary."@en-US ;
rdfs:range .
a rdf:Property ;
rdfs:label "Dynamic Properties"@en-US ;
rdfs:comment "A list (concatenated and separated) of additional measurements, facts, characteristics, or assertions about the record. Meant to provide a mechanism for structured content such as key-value pairs."@en-US ;
rdfs:range .
a rdf:Property ;
rdfs:label "Earliest Age Or Lowest Stage"@en-US ;
rdfs:comment "The full name of the earliest possible geochronologic age or lowest chronostratigraphic stage attributable to the stratigraphic horizon from which the cataloged item was collected."@en-US ;
rdfs:range .
a rdf:Property ;
rdfs:label "Earliest Eon Or Lowest Eonothem"@en-US ;
rdfs:comment "The full name of the earliest possible geochronologic eon or lowest chrono-stratigraphic eonothem or the informal name (\"Precambrian\") attributable to the stratigraphic horizon from which the cataloged item was collected."@en-US ;
rdfs:range .
a rdf:Property ;
rdfs:label "Earliest Epoch Or Lowest Series"@en-US ;
rdfs:comment "The full name of the earliest possible geochronologic epoch or lowest chronostratigraphic series attributable to the stratigraphic horizon from which the cataloged item was collected."@en-US ;
rdfs:range .
a rdf:Property ;
rdfs:label "Earliest Era Or Lowest Erathem"@en-US ;
rdfs:comment "The full name of the earliest possible geochronologic era or lowest chronostratigraphic erathem attributable to the stratigraphic horizon from which the cataloged item was collected."@en-US ;
rdfs:range .
a rdf:Property ;
rdfs:label "Earliest Period Or Lowest System"@en-US ;
rdfs:comment "The full name of the earliest possible geochronologic period or lowest chronostratigraphic system attributable to the stratigraphic horizon from which the cataloged item was collected."@en-US ;
rdfs:range .
a rdf:Property ;
rdfs:label "End Day Of Year"@en-US ;
rdfs:comment "The latest ordinal day of the year on which the Event occurred (1 for January 1, 365 for December 31, except in a leap year, in which case it is 366)."@en-US ;
rdfs:range .
a rdf:Property ;
rdfs:label "Establishment Means"@en-US ;
rdfs:comment "The process by which the biological individual(s) represented in the Occurrence became established at the location. Recommended best practice is to use a controlled vocabulary."@en-US ;
rdfs:range .
a rdf:Property ;
rdfs:label "Event Date"@en-US ;
rdfs:comment "The date-time or interval during which an Event occurred. For occurrences, this is the date-time when the event was recorded. Not suitable for a time in a geological context. Recommended best practice is to use an encoding scheme, such as ISO 8601:2004(E)."@en-US ;
rdfs:range xsd:string ;
rdfs:subPropertyOf .
a rdf:Property ;
rdfs:label "Event Remarks"@en-US ;
rdfs:comment "Comments or notes about the Event."@en-US ;
rdfs:range .
a rdf:Property ;
rdfs:label "Event Time"@en-US ;
rdfs:comment "The time or interval during which an Event occurred. Recommended best practice is to use an encoding scheme, such as ISO 8601:2004(E)."@en-US ;
rdfs:range .
a rdf:Property ;
rdfs:label "Family"@en-US ;
rdfs:comment "The full scientific name of the family in which the taxon is classified."@en-US ;
rdfs:range .
a rdf:Property ;
rdfs:label "Field Notes"@en-US ;
rdfs:comment "One of a) an indicator of the existence of, b) a reference to (publication, URI), or c) the text of notes taken in the field about the Event."@en-US ;
rdfs:range .
a rdf:Property ;
rdfs:label "Field Number"@en-US ;
rdfs:comment "An identifier given to the event in the field. Often serves as a link between field notes and the Event."@en-US ;
rdfs:range .
a rdf:Property ;
rdfs:label "Footprint SRS"@en-US ;
rdfs:comment "A Well-Known Text (WKT) representation of the Spatial Reference System (SRS) for the footprintWKT of the Location. Do not use this term to describe the SRS of the decimalLatitude and decimalLongitude, even if it is the same as for the footprintWKT - use the geodeticDatum instead."@en-US ;
rdfs:range .
a rdf:Property ;
rdfs:label "Footprint Spatial Fit"@en-US ;
rdfs:comment "The ratio of the area of the footprint (footprintWKT) to the area of the true (original, or most specific) spatial representation of the Location. Legal values are 0, greater than or equal to 1, or undefined. A value of 1 is an exact match or 100% overlap. A value of 0 should be used if the given footprint does not completely contain the original representation. The footprintSpatialFit is undefined (and should be left blank) if the original representation is a point and the given is not that same point. If both the original and the given georeference are the same point, the footprintSpatialFit is 1."@en-US ;
rdfs:range .
a rdf:Property ;
rdfs:label "Footprint WKT"@en-US ;
rdfs:comment "A Well-Known Text (WKT) representation of the shape (footprint, geometry) that defines the Location. A Location may have both a point-radius representation (see decimalLatitude) and a footprint representation, and they may differ from each other."@en-US ;
rdfs:range .
a rdf:Property ;
rdfs:label "Formation"@en-US ;
rdfs:comment "The full name of the lithostratigraphic formation from which the cataloged item was collected."@en-US ;
rdfs:range .
a rdf:Property ;
rdfs:label "Genus"@en-US ;
rdfs:comment "The full scientific name of the genus in which the taxon is classified."@en-US ;
rdfs:range .
a rdf:Property ;
rdfs:label "Geodetic Datum"@en-US ;
rdfs:comment "The ellipsoid, geodetic datum, or spatial reference system (SRS) upon which the geographic coordinates given in decimalLatitude and decimalLongitude as based. Recommended best practice is use the EPSG code as a controlled vocabulary to provide an SRS, if known. Otherwise use a controlled vocabulary for the name or code of the geodetic datum, if known. Otherwise use a controlled vocabulary for the name or code of the ellipsoid, if known. If none of these is known, use the value \"unknown\"."@en-US ;
rdfs:range .
a rdf:Property ;
rdfs:label "Georeference Protocol"@en-US ;
rdfs:comment "A description or reference to the methods used to determine the spatial footprint, coordinates, and uncertainties."@en-US ;
rdfs:range .
a rdf:Property ;
rdfs:label "Georeference Remarks"@en-US ;
rdfs:comment "Notes or comments about the spatial description determination, explaining assumptions made in addition or opposition to the those formalized in the method referred to in georeferenceProtocol."@en-US ;
rdfs:range .
a rdf:Property ;
rdfs:label "Georeference Sources"@en-US ;
rdfs:comment "A list (concatenated and separated) of maps, gazetteers, or other resources used to georeference the Location, described specifically enough to allow anyone in the future to use the same resources."@en-US ;
rdfs:range .
a rdf:Property ;
rdfs:label "Georeference Verification Status"@en-US ;
rdfs:comment "A categorical description of the extent to which the georeference has been verified to represent the best possible spatial description. Recommended best practice is to use a controlled vocabulary."@en-US ;
rdfs:range .
a rdf:Property ;
rdfs:label "Georeferenced By"@en-US ;
rdfs:comment "A list (concatenated and separated) of names of people, groups, or organizations who determined the georeference (spatial representation) for the Location."@en-US ;
rdfs:range xsd:string ;
rdfs:subPropertyOf .
a rdf:Property ;
rdfs:label "Georeferenced Date"@en-US ;
rdfs:comment "The date on which the Location was georeferenced. Recommended best practice is to use an encoding scheme, such as ISO 8601:2004(E)."@en-US ;
rdfs:range xsd:string ;
rdfs:subPropertyOf .
a rdf:Property ;
rdfs:label "Group"@en-US ;
rdfs:comment "The full name of the lithostratigraphic group from which the cataloged item was collected."@en-US ;
rdfs:range .
a rdf:Property ;
rdfs:label "Habitat"@en-US ;
rdfs:comment "A category or description of the habitat in which the Event occurred."@en-US ;
rdfs:range .
a rdf:Property ;
rdfs:label "Higher Classification"@en-US ;
rdfs:comment "A list (concatenated and separated) of taxa names terminating at the rank immediately superior to the taxon referenced in the taxon record. Recommended best practice is to order the list starting with the highest rank and separating the names for each rank with a semi-colon (\";\")."@en-US ;
rdfs:range .
a rdf:Property ;
rdfs:label "Higher Geography"@en-US ;
rdfs:comment "A list (concatenated and separated) of geographic names less specific than the information captured in the locality term."@en-US ;
rdfs:range .
a rdf:Property ;
rdfs:label "Highest Biostratigraphic Zone"@en-US ;
rdfs:comment "The full name of the highest possible geological biostratigraphic zone of the stratigraphic horizon from which the cataloged item was collected."@en-US ;
rdfs:range .
a rdf:Property ;
rdfs:label "Identification Qualifier"@en-US ;
rdfs:comment "A brief phrase or a standard term (\"cf.\", \"aff.\") to express the determiner's doubts about the Identification."@en-US ;
rdfs:range .
a rdf:Property ;
rdfs:label "Identification References"@en-US ;
rdfs:comment "A list (concatenated and separated) of references (publication, global unique identifier, URI) used in the Identification."@en-US ;
rdfs:range .
a rdf:Property ;
rdfs:label "Identification Remarks"@en-US ;
rdfs:comment "Comments or notes about the Identification."@en-US ;
rdfs:range .
a rdf:Property ;
rdfs:label "Identification Verification Status"@en-US ;
rdfs:comment "A categorical indicator of the extent to which the taxonomic identification has been verified to be correct. Recommended best practice is to use a controlled vocabulary such as that used in HISPID/ABCD."@en-US ;
rdfs:range .
a rdf:Property ;
rdfs:label "Identified By"@en-US ;
rdfs:comment "A list (concatenated and separated) of names of people, groups, or organizations who assigned the Taxon to the subject."@en-US ;
rdfs:range xsd:string ;
rdfs:subPropertyOf .
a rdf:Property ;
rdfs:label "Individual Count"@en-US ;
rdfs:comment "The number of individuals represented present at the time of the Occurrence."@en-US ;
rdfs:range .
a rdf:Property ;
rdfs:label "Information Withheld"@en-US ;
rdfs:comment "Additional information that exists, but that has not been shared in the given record."@en-US ;
rdfs:range .
a rdf:Property ;
rdfs:label "Infraspecific Epithet"@en-US ;
rdfs:comment "The name of the lowest or terminal infraspecific epithet of the scientificName, excluding any rank designation."@en-US ;
rdfs:range .
a rdf:Property ;
rdfs:label "Institution Code"@en-US ;
rdfs:comment "The name (or acronym) in use by the institution having custody of the object(s) or information referred to in the record."@en-US ;
rdfs:range .
a rdf:Property ;
rdfs:label "Institution ID"@en-US ;
rdfs:comment "An identifier for the institution having custody of the object(s) or information referred to in the record."@en-US ;
rdfs:range